Psyllid ID: psy7307

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------
Protein Sequence
MSLCLVLVLICAAHQLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLKS
Secondary Structure (PSIPRED)
ccccccccEEEcccccccccccccccccccccccccccEEEEEcccccEEEEEEEEEcccccccccEEEEccccHHHHHHHcccccccccccccccccEEEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHEEEEHccccccccccEEccccccEccccccccEEEEEcccccEEEEEEEEEcccccccccEEHHHHHHHHHHHEccccccccEEEEEcccccEEEEEEEEEccccccEccc
Coil and Loop (DISEMBL)
MSLCLVLVLICAAHQLVRADYdvfnrtsrqaqtgdsggplllqrpdkqwtIIGVVSwgigcgktpgvYVQVNKYLRWIYNtakgdsggplllqrpdkqwtIIGVVSWGIGCAQVLKS
Flexible Loop (DISEMBL)
MSLCLVLVLICAAHQLVRADYDVFNRTSrqaqtgdsggplllqRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLKS
Low Complexity Region (SEG)
MSLCLVLVLICAAHQLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLKS
Disordered region (IsUnstruct)
**LCLVLVLICAAHQLVRADYDVFNR*************LLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVL**
Disordered Region (DISOPRED)
***CLVLVLICAAHQLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAK**************QWTIIGVVSWGIGCAQV***
Disordered Region (DISEMBL)
MSLCLVLVLICAAHQLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLKS
Disordered Region (DISPRO)
*SLCLVLVLICAAHQLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVL*S
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSLCLVLVLICAAHQLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLKS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	117
UNIPROTKB|F1PXI5	581	PRSS42 "Uncharacterized protei	0.529	0.106	0.384	1.3e-16
RGD|1309581	1061	Tmprss9 "transmembrane proteas	0.393	0.043	0.520	2.2e-08
UNIPROTKB|Q7Z410	1059	TMPRSS9 "Transmembrane proteas	0.384	0.042	0.489	1e-15
UNIPROTKB|F1NP62	983	F1NP62 "Uncharacterized protei	0.384	0.045	0.510	1.1e-15
UNIPROTKB|I3LDL1	1047	TMPRSS9 "Uncharacterized prote	0.384	0.042	0.489	2.6e-15
UNIPROTKB|F1SNW6	591	F1SNW6 "Uncharacterized protei	0.376	0.074	0.510	7.3e-08
UNIPROTKB|E1B9Z9	1095	TMPRSS9 "Uncharacterized prote	0.393	0.042	0.479	2.7e-07
UNIPROTKB|F1SUG2	632	PRSS22 "Uncharacterized protei	0.418	0.077	0.442	1.5e-13
UNIPROTKB|E7ESG9	290	TMPRSS4 "Transmembrane proteas	0.427	0.172	0.574	5.7e-13
UNIPROTKB|I3L9G9	655	I3L9G9 "Uncharacterized protei	0.470	0.083	0.457	4.8e-07

UNIPROTKB|F1PXI5 PRSS42 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 144 (55.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 25/65 (38%), Positives = 38/65 (58%)

Query:    24 FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
             +    + +  GDSGGPL+ +  D  W  +G+VSWG GCG+   PGVY  +  Y  WI + 
Sbjct:   186 YKAAGKDSCQGDSGGPLVCKFQDT-WVQVGIVSWGFGCGRRNVPGVYTDIASYAEWIDSR 244

Query:    82 AKGDS 86
              +G++
Sbjct:   245 VRGEA 249

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

RGD|1309581 Tmprss9 "transmembrane protease, serine 9" [Rattus norvegicus (taxid:10116)]

 Score = 141 (54.7 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 25/48 (52%), Positives = 31/48 (64%)

Query:    33 TGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWI 78
             +GD+GGPL  + P  QW + GV SWG GCG+   PGVY +V   L WI
Sbjct:  1008 SGDAGGPLACREPSGQWVLTGVTSWGYGCGRPHFPGVYTRVAAVLGWI 1055

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|Q7Z410 TMPRSS9 "Transmembrane protease serine 9" [Homo sapiens (taxid:9606)]

 Score = 131 (51.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
 Identities = 23/47 (48%), Positives = 32/47 (68%)

Query:    34 GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWI 78
             GDSGGPL+ + P  ++ + G+VSWGIGC +   PGVY +V +   WI
Sbjct:   385 GDSGGPLVCEEPSGRFFLAGIVSWGIGCAEARRPGVYARVTRLRDWI 431

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|F1NP62 F1NP62 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 134 (52.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
 Identities = 24/47 (51%), Positives = 32/47 (68%)

Query:    34 GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWI 78
             GDSGGPL+ + P  ++ + G+VSWGIGC +   PGVY +V K   WI
Sbjct:   365 GDSGGPLVCEEPSGKFFLAGIVSWGIGCAEARRPGVYTRVTKLRDWI 411

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|I3LDL1 TMPRSS9 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 131 (51.2 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
 Identities = 23/47 (48%), Positives = 32/47 (68%)

Query:    34 GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWI 78
             GDSGGPL+ + P  ++ + G+VSWGIGC +   PGVY +V +   WI
Sbjct:   373 GDSGGPLVCEEPSGRFFLAGIVSWGIGCAEARRPGVYARVTRLRDWI 419

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|F1SNW6 F1SNW6 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 133 (51.9 bits), Expect = 7.3e-08, P = 7.3e-08
 Identities = 24/47 (51%), Positives = 32/47 (68%)

Query:    34 GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWI 78
             GDSGGPL+ +  D  W  +G+VSWGIGCG    PG+Y +V+ Y  W+
Sbjct:   544 GDSGGPLVCEFNDS-WVQVGIVSWGIGCGLRGYPGIYTEVSFYKDWV 589

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|E1B9Z9 TMPRSS9 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 131 (51.2 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 23/48 (47%), Positives = 30/48 (62%)

Query:    33 TGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWI 78
             +GD+GGPL  + P  +W + GV SWG GCG+   PGVY +V     WI
Sbjct:  1042 SGDAGGPLACREPSGRWVLTGVTSWGYGCGRPQFPGVYTRVAAVRGWI 1089

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|F1SUG2 PRSS22 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
 Identities = 23/52 (44%), Positives = 32/52 (61%)

Query:    29 RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWI 78
             R A  GDSGGPL+ Q  +  W + GV+SWG GC +   PGVY+ +  +  W+
Sbjct:   234 RDACLGDSGGPLMCQ-VEGTWLLAGVISWGEGCAERNRPGVYISLAAHRSWV 284

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|E7ESG9 TMPRSS4 "Transmembrane protease serine 4" [Homo sapiens (taxid:9606)]

 Score = 173 (66.0 bits), Expect = 5.7e-13, P = 5.7e-13
 Identities = 31/54 (57%), Positives = 38/54 (70%)

Query:    34 GDSGGPLLLQRPDKQWTIIGVVSWGIGCG--KTPGVYVQVNKYLRWIYNTAKGD 85
             GDSGGPL+ Q    QW ++G+VSWG GCG   TPGVY +V+ YL WIYN  K +
Sbjct:   238 GDSGGPLMYQ--SDQWHVVGIVSWGYGCGGPSTPGVYTKVSAYLNWIYNVWKAE 289

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|I3L9G9 I3L9G9 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 126 (49.4 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 27/59 (45%), Positives = 35/59 (59%)

Query:    34 GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT-AKGDSGGP 89
             GDSGGPL  +  + +W + GV+SW   C K   PGVY +V KY +WI    +KG   GP
Sbjct:   585 GDSGGPLACE-VEGRWILAGVLSWEKACTKVHNPGVYTRVTKYSKWIKKQISKGVLSGP 642

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.21	0.691

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	117
cd00190	232	cd00190, Tryp_SPc, Trypsin-like serine protease; M	2e-15
smart00020	229	smart00020, Tryp_SPc, Trypsin-like serine protease	8e-15
cd00190	232	cd00190, Tryp_SPc, Trypsin-like serine protease; M	3e-09
smart00020	229	smart00020, Tryp_SPc, Trypsin-like serine protease	3e-09
pfam00089	218	pfam00089, Trypsin, Trypsin	6e-09
COG5640	413	COG5640, COG5640, Secreted trypsin-like serine pro	6e-07
pfam00089	218	pfam00089, Trypsin, Trypsin	7e-04

>gnl|CDD|238113 cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

 Score = 69.2 bits (170), Expect = 2e-15
 Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGPL+      +  ++G+VSWG GC +   PGVY +V+ YL WI  T
Sbjct: 184 GDSGGPLVCNDNG-RGVLVGIVSWGSGCARPNYPGVYTRVSSYLDWIQKT 232

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues. Length = 232

>gnl|CDD|214473 smart00020, Tryp_SPc, Trypsin-like serine protease

 Score = 67.3 bits (165), Expect = 8e-15
 Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 4/47 (8%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWI 78
           GDSGGPL+    D +W ++G+VSWG GC +   PGVY +V+ YL WI
Sbjct: 185 GDSGGPLVCN--DGRWVLVGIVSWGSGCARPGKPGVYTRVSSYLDWI 229

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues. Length = 229

>gnl|CDD|238113 cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

 Score = 52.3 bits (126), Expect = 3e-09
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL+      +  ++G+VSWG GCA+
Sbjct: 183 QGDSGGPLVCNDNG-RGVLVGIVSWGSGCAR 212

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues. Length = 232

>gnl|CDD|214473 smart00020, Tryp_SPc, Trypsin-like serine protease

 Score = 52.3 bits (126), Expect = 3e-09
 Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 2/33 (6%)

Query: 81  TAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
             +GDSGGPL+    D +W ++G+VSWG GCA+
Sbjct: 182 ACQGDSGGPLVCN--DGRWVLVGIVSWGSGCAR 212

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues. Length = 229

>gnl|CDD|215708 pfam00089, Trypsin, Trypsin

 Score = 51.3 bits (123), Expect = 6e-09
 Identities = 26/47 (55%), Positives = 30/47 (63%), Gaps = 6/47 (12%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGC--GKTPGVYVQVNKYLRWI 78
           GDSGGPL+    D    +IG+VSWG GC  G  PGVY  V+ YL WI
Sbjct: 176 GDSGGPLV--CSDG--ELIGIVSWGYGCASGNYPGVYTPVSSYLDWI 218

Length = 218

>gnl|CDD|227927 COG5640, COG5640, Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

 Score = 46.0 bits (109), Expect = 6e-07
 Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 8/58 (13%)

Query: 26  RTSRQAQTGDSGGPLLLQRPD--KQWTIIGVVSWGIG-CGKT--PGVYVQVNKYLRWI 78
           R  + A  GDSGGP+  +  +   Q    GVVSWG G CG T  PGVY  V+ Y  WI
Sbjct: 220 RPPKDACQGDSGGPIFHKGEEGRVQ---RGVVSWGDGGCGGTLIPGVYTNVSNYQDWI 274

Length = 413

>gnl|CDD|215708 pfam00089, Trypsin, Trypsin

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 4/33 (12%)

Query: 81  TAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
             +GDSGGPL+    D    +IG+VSWG GCA 
Sbjct: 173 ACQGDSGGPLV--CSDG--ELIGIVSWGYGCAS 201

Length = 218

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	117
KOG3627|consensus	256		99.35
cd00190	232	Tryp_SPc Trypsin-like serine protease; Many of the	99.09
COG5640	413	Secreted trypsin-like serine protease [Posttransla	99.07
smart00020	229	Tryp_SPc Trypsin-like serine protease. Many of the	98.79
PF00089	220	Trypsin: Trypsin; InterPro: IPR001254 In the MEROP	98.61
KOG3627|consensus	256		98.48
COG5640	413	Secreted trypsin-like serine protease [Posttransla	97.94
cd00190	232	Tryp_SPc Trypsin-like serine protease; Many of the	97.63
smart00020	229	Tryp_SPc Trypsin-like serine protease. Many of the	97.41
PF00089	220	Trypsin: Trypsin; InterPro: IPR001254 In the MEROP	96.54
PF03761	282	DUF316: Domain of unknown function (DUF316) ; Inte	93.73
PF03761	282	DUF316: Domain of unknown function (DUF316) ; Inte	86.57
PF02395	769	Peptidase_S6: Immunoglobulin A1 protease Serine pr	85.73
PF02395	769	Peptidase_S6: Immunoglobulin A1 protease Serine pr	83.2

>KOG3627|consensus

Probab=99.35  E-value=4.4e-12  Score=87.52  Aligned_cols=80  Identities=34%  Similarity=0.706  Sum_probs=62.1

Q ss_pred             eeeeccccccCCcc-----cccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCC-CCC--CCceeeeccc
Q psy7307           3 LCLVLVLICAAHQL-----VRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGK--TPGVYVQVNK   73 (117)
Q Consensus         3 ~~~~~~~~C~~~~~-----~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~-C~~--~p~~~t~v~~   73 (117)
                      +.+.+...|.....     ....+|+.. ...+++|+||+|+||++.... +++++||+||+.. |..  .|++|+++..
T Consensus       167 v~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPLv~~~~~-~~~~~GivS~G~~~C~~~~~P~vyt~V~~  245 (256)
T KOG3627|consen  167 VPIISNSECRRAYGGLGTITDTMLCAGGPEGGKDACQGDSGGPLVCEDNG-RWVLVGIVSWGSGGCGQPNYPGVYTRVSS  245 (256)
T ss_pred             EeEcChhHhcccccCccccCCCEEeeCccCCCCccccCCCCCeEEEeeCC-cEEEEEEEEecCCCCCCCCCCeEEeEhHH
Confidence            45556666765322     223477776 567889999999999998533 7999999999966 987  7999999999


Q ss_pred             chHHHHhhcc
Q psy7307          74 YLRWIYNTAK   83 (117)
Q Consensus        74 ~~~wi~~~~~   83 (117)
                      |.+||++...
T Consensus       246 y~~WI~~~~~  255 (256)
T KOG3627|consen  246 YLDWIKENIG  255 (256)
T ss_pred             hHHHHHHHhc
Confidence            9999988653

>cd00190 Tryp_SPc Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

Probab=99.09  E-value=2.3e-10  Score=76.91  Aligned_cols=77  Identities=35%  Similarity=0.674  Sum_probs=58.1

Q ss_pred             eeeccccccCCc-----ccccceeecCCC-CCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccch
Q psy7307           4 CLVLVLICAAHQ-----LVRADYDVFNRT-SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         4 ~~~~~~~C~~~~-----~~~~~~~~~~~~-~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~   75 (117)
                      .+.+...|....     +....+|+.... ..+.|.+|+|+||+... +++++++||++++..|..  .|.+|+++..|.
T Consensus       148 ~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~-~~~~~lvGI~s~g~~c~~~~~~~~~t~v~~~~  226 (232)
T cd00190         148 PIVSNAECKRAYSYGGTITDNMLCAGGLEGGKDACQGDSGGPLVCND-NGRGVLVGIVSWGSGCARPNYPGVYTRVSSYL  226 (232)
T ss_pred             eeECHHHhhhhccCcccCCCceEeeCCCCCCCccccCCCCCcEEEEe-CCEEEEEEEEehhhccCCCCCCCEEEEcHHhh
Confidence            344445555432     223445666554 67899999999999874 478999999999877985  789999999999


Q ss_pred             HHHHhh
Q psy7307          76 RWIYNT   81 (117)
Q Consensus        76 ~wi~~~   81 (117)
                      +||+++
T Consensus       227 ~WI~~~  232 (232)
T cd00190         227 DWIQKT  232 (232)
T ss_pred             HHhhcC
Confidence            999763

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.

>COG5640 Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

Probab=99.07  E-value=4.8e-10  Score=80.16  Aligned_cols=65  Identities=40%  Similarity=0.748  Sum_probs=52.8

Q ss_pred             eeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCC-CCC--CCceeeecccchHHHHhhccCCCC
Q psy7307          21 YDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGK--TPGVYVQVNKYLRWIYNTAKGDSG   87 (117)
Q Consensus        21 ~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~-C~~--~p~~~t~v~~~~~wi~~~~~gdsg   87 (117)
                      +|+.... ++.|++|+|+|++....+++ .++||+||+.+ |..  .|.+||+++.|.+||...+++-+-
T Consensus       216 ~cag~~~-~daCqGDSGGPi~~~g~~G~-vQ~GVvSwG~~~Cg~t~~~gVyT~vsny~~WI~a~~~~l~~  283 (413)
T COG5640         216 FCAGRPP-KDACQGDSGGPIFHKGEEGR-VQRGVVSWGDGGCGGTLIPGVYTNVSNYQDWIAAMTNGLSY  283 (413)
T ss_pred             eecCCCC-cccccCCCCCceEEeCCCcc-EEEeEEEecCCCCCCCCcceeEEehhHHHHHHHHHhcCCCc
Confidence            4444444 99999999999998865554 89999999975 987  888999999999999887765443

>smart00020 Tryp_SPc Trypsin-like serine protease

Probab=98.79  E-value=1.4e-08  Score=68.41  Aligned_cols=58  Identities=43%  Similarity=0.954  Sum_probs=48.4

Q ss_pred             cceeecCCC-CCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHH
Q psy7307          19 ADYDVFNRT-SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWI   78 (117)
Q Consensus        19 ~~~~~~~~~-~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi   78 (117)
                      ..+|+.... ..+.|.+|+|+||+....  +|+++||.+++..|..  .+.+|+++..|.+||
T Consensus       169 ~~~C~~~~~~~~~~c~gdsG~pl~~~~~--~~~l~Gi~s~g~~C~~~~~~~~~~~i~~~~~WI  229 (229)
T smart00020      169 NMLCAGGLEGGKDACQGDSGGPLVCNDG--RWVLVGIVSWGSGCARPGKPGVYTRVSSYLDWI  229 (229)
T ss_pred             CcEeecCCCCCCcccCCCCCCeeEEECC--CEEEEEEEEECCCCCCCCCCCEEEEeccccccC
Confidence            345555544 678999999999998853  8999999999988984  888999999999997

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.

>PF00089 Trypsin: Trypsin; InterPro: IPR001254 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.61  E-value=4.8e-08  Score=65.22  Aligned_cols=58  Identities=41%  Similarity=0.772  Sum_probs=47.7

Q ss_pred             cccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHH
Q psy7307          17 VRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWI   78 (117)
Q Consensus        17 ~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi   78 (117)
                      ....+|+......+.|.+|+|+||++..   . .++||++++..|..  .|.+|+++..|.+||
T Consensus       161 ~~~~~c~~~~~~~~~~~g~sG~pl~~~~---~-~lvGI~s~~~~c~~~~~~~v~~~v~~~~~WI  220 (220)
T PF00089_consen  161 TPNMICAGSSGSGDACQGDSGGPLICNN---N-YLVGIVSFGENCGSPNYPGVYTRVSSYLDWI  220 (220)
T ss_dssp             TTTEEEEETTSSSBGGTTTTTSEEEETT---E-EEEEEEEEESSSSBTTSEEEEEEGGGGHHHH
T ss_pred             ccccccccccccccccccccccccccce---e-eecceeeecCCCCCCCcCEEEEEHHHhhccC
Confidence            3445666665567899999999999874   2 79999999878887  579999999999998

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine proteases belong to the MEROPS peptidase family S1 (chymotrypsin family, clan PA(S))and to peptidase family S6 (Hap serine peptidases). The chymotrypsin family is almost totally confined to animals, although trypsin-like enzymes are found in actinomycetes of the genera Streptomyces and Saccharopolyspora, and in the fungus Fusarium oxysporum []. The enzymes are inherently secreted, being synthesised with a signal peptide that targets them to the secretory pathway. Animal enzymes are either secreted directly, packaged into vesicles for regulated secretion, or are retained in leukocyte granules []. The Hap family, 'Haemophilus adhesion and penetration', are proteins that play a role in the interaction with human epithelial cells. The serine protease activity is localized at the N-terminal domain, whereas the binding domain is in the C-terminal region. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1SPJ_A 1A5I_A 2ZGH_A 2ZKS_A 2ZGJ_A 2ZGC_A 2ODP_A 2I6Q_A 2I6S_A 2ODQ_A ....

>KOG3627|consensus

Probab=98.48  E-value=1.7e-07  Score=64.64  Aligned_cols=66  Identities=30%  Similarity=0.573  Sum_probs=48.5

Q ss_pred             CcEEEEEEeecCCCCCC-CCc--ee--eecccch-HHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcc-cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG--VY--VQVNKYL-RWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~--~~--t~v~~~~-~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~~~  114 (117)
                      .+...+.+++.. .|.. +..  ..  +.+|... ...+++|+|||||||++.... +|+++||+|||.+ |+..
T Consensus       162 L~~~~v~i~~~~-~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPLv~~~~~-~~~~~GivS~G~~~C~~~  234 (256)
T KOG3627|consen  162 LQEVDVPIISNS-ECRRAYGGLGTITDTMLCAGGPEGGKDACQGDSGGPLVCEDNG-RWVLVGIVSWGSGGCGQP  234 (256)
T ss_pred             eEEEEEeEcChh-HhcccccCccccCCCEEeeCccCCCCccccCCCCCeEEEeeCC-cEEEEEEEEecCCCCCCC
Confidence            445577788775 7987 332  11  2355543 556778999999999998644 8999999999998 9875

>COG5640 Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

Probab=97.94  E-value=8.8e-06  Score=58.74  Aligned_cols=36  Identities=42%  Similarity=0.860  Sum_probs=30.8

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCcc-ccccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQVL  115 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~~~~  115 (117)
                      +++|++|||+|+.....+++ .+.||+|||.+ |+.+.
T Consensus       223 ~daCqGDSGGPi~~~g~~G~-vQ~GVvSwG~~~Cg~t~  259 (413)
T COG5640         223 KDACQGDSGGPIFHKGEEGR-VQRGVVSWGDGGCGGTL  259 (413)
T ss_pred             cccccCCCCCceEEeCCCcc-EEEeEEEecCCCCCCCC
Confidence            89999999999999865554 78899999986 98653

>cd00190 Tryp_SPc Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

Probab=97.63  E-value=5.9e-05  Score=50.51  Aligned_cols=35  Identities=43%  Similarity=0.933  Sum_probs=30.7

Q ss_pred             HHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          78 IYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ....|.+|||+||.+.. +++|+|+||+||+..|..
T Consensus       178 ~~~~c~gdsGgpl~~~~-~~~~~lvGI~s~g~~c~~  212 (232)
T cd00190         178 GKDACQGDSGGPLVCND-NGRGVLVGIVSWGSGCAR  212 (232)
T ss_pred             CCccccCCCCCcEEEEe-CCEEEEEEEEehhhccCC
Confidence            45789999999999984 588999999999988885

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.

>smart00020 Tryp_SPc Trypsin-like serine protease

Probab=97.41  E-value=0.00021  Score=47.98  Aligned_cols=34  Identities=47%  Similarity=1.058  Sum_probs=30.1

Q ss_pred             HHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccc
Q psy7307          77 WIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCA  112 (117)
Q Consensus        77 wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~  112 (117)
                      +....|.+|+|+||++..+  +|+|+||+|++..|.
T Consensus       178 ~~~~~c~gdsG~pl~~~~~--~~~l~Gi~s~g~~C~  211 (229)
T smart00020      178 GGKDACQGDSGGPLVCNDG--RWVLVGIVSWGSGCA  211 (229)
T ss_pred             CCCcccCCCCCCeeEEECC--CEEEEEEEEECCCCC
Confidence            3567899999999999854  999999999999998

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.

>PF00089 Trypsin: Trypsin; InterPro: IPR001254 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.54  E-value=0.0025  Score=42.31  Aligned_cols=32  Identities=38%  Similarity=0.813  Sum_probs=27.8

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      .+.|.+|||+||++...    +|+||+|++..|...
T Consensus       173 ~~~~~g~sG~pl~~~~~----~lvGI~s~~~~c~~~  204 (220)
T PF00089_consen  173 GDACQGDSGGPLICNNN----YLVGIVSFGENCGSP  204 (220)
T ss_dssp             SBGGTTTTTSEEEETTE----EEEEEEEEESSSSBT
T ss_pred             cccccccccccccccee----eecceeeecCCCCCC
Confidence            47899999999999863    799999999888765

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine proteases belong to the MEROPS peptidase family S1 (chymotrypsin family, clan PA(S))and to peptidase family S6 (Hap serine peptidases). The chymotrypsin family is almost totally confined to animals, although trypsin-like enzymes are found in actinomycetes of the genera Streptomyces and Saccharopolyspora, and in the fungus Fusarium oxysporum []. The enzymes are inherently secreted, being synthesised with a signal peptide that targets them to the secretory pathway. Animal enzymes are either secreted directly, packaged into vesicles for regulated secretion, or are retained in leukocyte granules []. The Hap family, 'Haemophilus adhesion and penetration', are proteins that play a role in the interaction with human epithelial cells. The serine protease activity is localized at the N-terminal domain, whereas the binding domain is in the C-terminal region. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1SPJ_A 1A5I_A 2ZGH_A 2ZKS_A 2ZGJ_A 2ZGC_A 2ODP_A 2I6Q_A 2I6S_A 2ODQ_A ....

>PF03761 DUF316: Domain of unknown function (DUF316) ; InterPro: IPR005514 This is a family of uncharacterised proteins from Caenorhabditis elegans

Probab=93.73  E-value=0.21  Score=35.03  Aligned_cols=47  Identities=34%  Similarity=0.661  Sum_probs=33.4

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCCCCceeeecccch
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGKTPGVYVQVNKYL   75 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~~p~~~t~v~~~~   75 (117)
                      .+..|.+|+||||+-.. +++++++||.+.+. .|......|.++..|.
T Consensus       225 ~~~~~~~d~Gg~lv~~~-~gr~tlIGv~~~~~~~~~~~~~~f~~v~~~~  272 (282)
T PF03761_consen  225 KQYSCKGDRGGPLVKNI-NGRWTLIGVGASGNYECNKNNSYFFNVSWYQ  272 (282)
T ss_pred             ccccCCCCccCeEEEEE-CCCEEEEEEEccCCCcccccccEEEEHHHhh
Confidence            46789999999999774 68999999998762 3432244555655443

>PF03761 DUF316: Domain of unknown function (DUF316) ; InterPro: IPR005514 This is a family of uncharacterised proteins from Caenorhabditis elegans

Probab=86.57  E-value=0.73  Score=32.33  Aligned_cols=30  Identities=43%  Similarity=0.780  Sum_probs=25.6

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      +..|.+|+||||+-. .+++|.|+||.+-+.
T Consensus       226 ~~~~~~d~Gg~lv~~-~~gr~tlIGv~~~~~  255 (282)
T PF03761_consen  226 QYSCKGDRGGPLVKN-INGRWTLIGVGASGN  255 (282)
T ss_pred             cccCCCCccCeEEEE-ECCCEEEEEEEccCC
Confidence            566899999999987 578999999988665

>PF02395 Peptidase_S6: Immunoglobulin A1 protease Serine protease Prosite pattern; InterPro: IPR000710 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=85.73  E-value=0.85  Score=36.93  Aligned_cols=35  Identities=37%  Similarity=0.653  Sum_probs=23.3

Q ss_pred             HHHHhhccCCCCCceeecc-CCCcEEEEEeeeeCcc
Q psy7307          76 RWIYNTAKGDSGGPLLLQR-PDKQWTIIGVVSWGIG  110 (117)
Q Consensus        76 ~wi~~~~~gdsg~pl~~~~-~~~~~~l~Gi~s~~~~  110 (117)
                      ++-.....||||+||-..+ ..+.|.|+|+.+.+.+
T Consensus       208 pL~n~~~~GDSGSPlF~YD~~~kKWvl~Gv~~~~~~  243 (769)
T PF02395_consen  208 PLPNYGSPGDSGSPLFAYDKEKKKWVLVGVLSGGNG  243 (769)
T ss_dssp             SSBEB--TT-TT-EEEEEETTTTEEEEEEEEEEECC
T ss_pred             ccccccccCcCCCceEEEEccCCeEEEEEEEccccc
Confidence            4445567899999996665 4678999999986543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S6 (clan PA(S)). The type sample being the IgA1-specific serine endopeptidase from Neisseria gonorrhoeae []. These cleave prolyl bonds in the hinge regions of immunoglobulin A heavy chains. Similar specificity is shown by the unrelated family of M26 metalloendopeptidases.; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 3SZE_A 3H09_B 3SYJ_A 1WXR_A 3AK5_B.

>PF02395 Peptidase_S6: Immunoglobulin A1 protease Serine protease Prosite pattern; InterPro: IPR000710 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=83.20  E-value=2.1  Score=34.73  Aligned_cols=62  Identities=27%  Similarity=0.508  Sum_probs=35.1

Q ss_pred             CcccCCCCCeeEEEc-CCCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhccCCCCCceeec
Q psy7307          30 QAQTGDSGGPLLLQR-PDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQ   93 (117)
Q Consensus        30 ~~C~~dsG~pl~~~~-~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~gdsg~pl~~~   93 (117)
                      ..=.||||+||..-+ ...+|+++|+++...........+..  ...+++....+.|...|+...
T Consensus       212 ~~~~GDSGSPlF~YD~~~kKWvl~Gv~~~~~~~~g~~~~~~~--~~~~f~~~~~~~d~~~~v~~~  274 (769)
T PF02395_consen  212 YGSPGDSGSPLFAYDKEKKKWVLVGVLSGGNGYNGKGNWWNV--IPPDFINQIKQNDTDGPVKFK  274 (769)
T ss_dssp             B--TT-TT-EEEEEETTTTEEEEEEEEEEECCCCHSEEEEEE--ECHHHHHHHHHHCCEEEEECC
T ss_pred             ccccCcCCCceEEEEccCCeEEEEEEEccccccCCccceeEE--ecHHHHHHHHhhhcccceeec
Confidence            345799999996543 36899999999876222112222222  224555666666777766653

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S6 (clan PA(S)). The type sample being the IgA1-specific serine endopeptidase from Neisseria gonorrhoeae []. These cleave prolyl bonds in the hinge regions of immunoglobulin A heavy chains. Similar specificity is shown by the unrelated family of M26 metalloendopeptidases.; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 3SZE_A 3H09_B 3SYJ_A 1WXR_A 3AK5_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	117
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	4e-20
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	2e-12
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	2e-19
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	4e-12
1md8_A	329	C1R complement serine protease; innate immunity, a	5e-19
1md8_A	329	C1R complement serine protease; innate immunity, a	3e-10
1gpz_A	399	Complement C1R component; hydrolase, activation, i	6e-19
1gpz_A	399	Complement C1R component; hydrolase, activation, i	3e-10
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	8e-19
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	2e-10
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	9e-19
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	2e-11
1elv_A	333	Complement C1S component; trypsin-like serin prote	2e-18
1elv_A	333	Complement C1S component; trypsin-like serin prote	1e-09
2xrc_A	565	Human complement factor I; immune system, hydrolas	4e-18
2xrc_A	565	Human complement factor I; immune system, hydrolas	3e-11
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	5e-18
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	2e-11
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	1e-17
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	7e-09
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	2e-17
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	1e-10
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	2e-17
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	2e-10
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	2e-17
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	1e-10
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	2e-17
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	3e-10
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	2e-17
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	3e-10
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	2e-17
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	2e-09
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	4e-17
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	1e-10
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	4e-17
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	2e-09
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	5e-17
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	6e-10
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	6e-17
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	1e-09
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	6e-17
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	8e-10
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	8e-17
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	1e-09
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	8e-17
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	3e-09
1aut_C	250	Activated protein C; serine proteinase, plasma cal	1e-16
1aut_C	250	Activated protein C; serine proteinase, plasma cal	2e-09
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	2e-16
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	1e-08
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	2e-16
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	1e-09
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	2e-16
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	3e-09
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	2e-16
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	1e-08
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	2e-16
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	6e-09
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	3e-16
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	6e-09
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	7e-16
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	2e-08
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	9e-16
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	3e-06
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	1e-15
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	2e-08
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	1e-15
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	7e-09
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	1e-15
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	2e-06
1a7s_A	225	Heparin binding protein; serine protease homolog,	1e-15
1a7s_A	225	Heparin binding protein; serine protease homolog,	4e-06
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	1e-15
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	3e-06
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	1e-15
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	2e-08
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	1e-15
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	7e-06
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	1e-15
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	8e-09
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	2e-15
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	1e-08
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	2e-15
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	5e-06
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	2e-15
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	1e-08
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	2e-15
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	2e-09
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	2e-15
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	3e-09
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	2e-15
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	3e-08
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	3e-15
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	1e-07
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	3e-15
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	3e-05
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	4e-15
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	2e-08
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	4e-15
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	1e-08
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	4e-15
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	1e-07
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	7e-15
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	4e-08
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	8e-15
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	2e-08
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	1e-14
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	6e-09
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	1e-14
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	1e-07
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	2e-14
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	2e-07
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	2e-14
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	7e-08
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	2e-14
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	4e-08
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	4e-14
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	2e-07
3hrz_D	741	Complement factor B; serine protease, glycosilated	8e-14
3hrz_D	741	Complement factor B; serine protease, glycosilated	2e-08
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	9e-14
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	3e-06
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	1e-13
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	6e-07
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	1e-13
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	9e-07
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	2e-13
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	5e-07
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	2e-13
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	6e-06
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	3e-13
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	2e-06
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	3e-13
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	3e-06
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	3e-13
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	4e-06
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	3e-13
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	2e-06
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	4e-13
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	4e-06
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	4e-13
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	4e-06
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	4e-13
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	4e-06
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	4e-13
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	6e-06
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	5e-13
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	6e-07
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	6e-13
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	2e-05
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	7e-13
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	6e-06
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	7e-13
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	3e-05
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	8e-13
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	7e-06
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	9e-13
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	2e-05
2aiq_A	231	Protein C activator; snake venom serine proteinase	1e-12
2aiq_A	231	Protein C activator; snake venom serine proteinase	3e-05
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	1e-12
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	1e-05
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	1e-12
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	2e-05
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	1e-12
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	2e-05
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	2e-12
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	7e-06
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	2e-12
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	3e-05
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	2e-12
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	2e-05
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	2e-12
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	7e-06
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	2e-12
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	3e-05
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	9e-12
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	1e-07
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	2e-11
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	6e-05
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	6e-11
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	7e-04
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	4e-05
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	7e-05
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	4e-04

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia} Length = 278

 Score = 81.6 bits (202), Expect = 4e-20
 Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGPLL +R ++Q+ + G+VS+G  CG    PG+Y +V KY  WI   
Sbjct: 226 GDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIEGN 275

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia} Length = 278

 Score = 60.8 bits (148), Expect = 2e-12
 Identities = 15/31 (48%), Positives = 22/31 (70%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
            GDSGGPLL +R ++Q+ + G+VS+G  C  
Sbjct: 225 GGDSGGPLLAERANQQFFLEGLVSFGATCGT 255

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida} Length = 238

 Score = 78.8 bits (195), Expect = 2e-19
 Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK-TPGVYVQVNKYLRWIYNT 81
           GDSGGPL ++     ++++G+VSWGIGC    PGVY +V  +  WI +T
Sbjct: 186 GDSGGPLSVKDGSGIFSLVGIVSWGIGCASGYPGVYSRVGFHAGWITDT 234

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida} Length = 238

 Score = 59.2 bits (144), Expect = 4e-12
 Identities = 16/31 (51%), Positives = 24/31 (77%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL ++     ++++G+VSWGIGCA 
Sbjct: 185 QGDSGGPLSVKDGSGIFSLVGIVSWGIGCAS 215

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A* Length = 329

 Score = 79.0 bits (195), Expect = 5e-19
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 34  GDSGGPLLLQRPDK-QWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNT 81
           GDSGG   ++ P+  +W   G+VSWGIGC +  G Y +V  Y+ WI   
Sbjct: 278 GDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKE 326

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A* Length = 329

 Score = 54.7 bits (132), Expect = 3e-10
 Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)

Query: 83  KGDSGGPLLLQRPDK-QWTIIGVVSWGIGCAQ 113
           +GDSGG   ++ P+  +W   G+VSWGIGC++
Sbjct: 277 QGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR 308

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 79.5 bits (196), Expect = 6e-19
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 34  GDSGGPLLLQRPDK-QWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGD 85
           GDSGG   ++ P+  +W   G+VSWGIGC +  G Y +V  Y+ WI    + +
Sbjct: 346 GDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEMEEE 398

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 55.2 bits (133), Expect = 3e-10
 Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)

Query: 83  KGDSGGPLLLQRPDK-QWTIIGVVSWGIGCAQ 113
           +GDSGG   ++ P+  +W   G+VSWGIGC++
Sbjct: 345 QGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR 376

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2 Length = 242

 Score = 77.3 bits (191), Expect = 8e-19
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 34  GDSGGPLLLQRPDKQ-WTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGD 85
           GDSGG   ++ P+   W   G+VSWGIGC +  G Y +V  Y+ WI    + +
Sbjct: 189 GDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEMEEE 241

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2 Length = 242

 Score = 54.6 bits (132), Expect = 2e-10
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 83  KGDSGGPLLLQRPDKQ-WTIIGVVSWGIGCAQ 113
           +GDSGG   ++ P+   W   G+VSWGIGC++
Sbjct: 188 QGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR 219

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A Length = 224

 Score = 76.8 bits (190), Expect = 9e-19
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK 83
           GDSGGP+  +    +W  +G+VSWG GC +    GVY +V+ +   I + A+
Sbjct: 171 GDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAAR 222

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A Length = 224

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 15/31 (48%), Positives = 22/31 (70%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGP+  +    +W  +G+VSWG GCA+
Sbjct: 170 QGDSGGPMFRKDNADEWVQVGIVSWGEGCAR 200

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 Length = 333

 Score = 77.5 bits (191), Expect = 2e-18
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 34  GDSGGPLLLQRPDKQ--WTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSG 87
           GDSGG   +Q P+ +  +   G+VSWG  CG   G+Y +V  Y+ WI  T + +S 
Sbjct: 275 GDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT-YGLYTRVKNYVDWIMKTMQENST 329

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 Length = 333

 Score = 53.2 bits (128), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 83  KGDSGGPLLLQRPDKQ--WTIIGVVSWGIGCAQ 113
           KGDSGG   +Q P+ +  +   G+VSWG  C  
Sbjct: 274 KGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT 306

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Length = 565

 Score = 77.3 bits (190), Expect = 4e-18
 Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIY 79
           GDSGGPL+    +    + GVVSWG  CGK   PGVY +V  Y  WI 
Sbjct: 505 GDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWIS 552

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Length = 565

 Score = 57.6 bits (139), Expect = 3e-11
 Identities = 15/31 (48%), Positives = 19/31 (61%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           KGDSGGPL+    +    + GVVSWG  C +
Sbjct: 504 KGDSGGPLVCMDANNVTYVWGVVSWGENCGK 534

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A* Length = 241

 Score = 75.3 bits (186), Expect = 5e-18
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGPL     D +    GVVSWG GC +   PGVY ++  +  WI   
Sbjct: 189 GDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKEN 238

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A* Length = 241

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 18/31 (58%), Positives = 20/31 (64%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL     D +    GVVSWG GCAQ
Sbjct: 188 QGDSGGPLSSVEADGRIFQAGVVSWGDGCAQ 218

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ... Length = 259

 Score = 74.3 bits (183), Expect = 2e-17
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 34  GDSGGPLLLQRP-DKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGP +++ P + +W  +G+VSWG GC +    G Y  V +  +WI   
Sbjct: 203 GDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKV 253

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ... Length = 259

 Score = 55.4 bits (134), Expect = 1e-10
 Identities = 15/32 (46%), Positives = 24/32 (75%), Gaps = 1/32 (3%)

Query: 83  KGDSGGPLLLQRP-DKQWTIIGVVSWGIGCAQ 113
           +GDSGGP +++ P + +W  +G+VSWG GC +
Sbjct: 202 EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDR 233

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score = 75.3 bits (185), Expect = 2e-17
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 34  GDSGGPLLLQRP-DKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGP +++ P + +W  +G+VSWG GC +    G Y  V +  +WI   
Sbjct: 368 GDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKV 418

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score = 55.6 bits (134), Expect = 2e-10
 Identities = 15/32 (46%), Positives = 24/32 (75%), Gaps = 1/32 (3%)

Query: 83  KGDSGGPLLLQRP-DKQWTIIGVVSWGIGCAQ 113
           +GDSGGP +++ P + +W  +G+VSWG GC +
Sbjct: 367 EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDR 398

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ... Length = 289

 Score = 74.3 bits (183), Expect = 2e-17
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 34  GDSGGPLLLQRP-DKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGP +++ P + +W  +G+VSWG GC +    G Y  V +  +WI   
Sbjct: 233 GDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKV 283

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ... Length = 289

 Score = 55.9 bits (135), Expect = 1e-10
 Identities = 15/32 (46%), Positives = 24/32 (75%), Gaps = 1/32 (3%)

Query: 83  KGDSGGPLLLQRP-DKQWTIIGVVSWGIGCAQ 113
           +GDSGGP +++ P + +W  +G+VSWG GC +
Sbjct: 232 EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDR 263

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ... Length = 241

 Score = 73.8 bits (182), Expect = 2e-17
 Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGP + +  D  + + G+VSWG GC +    G+Y +V  +L+WI  +
Sbjct: 183 GDSGGPHVTRFKDT-YFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRS 231

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ... Length = 241

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGP + +  D  + + G+VSWG GCA+
Sbjct: 182 QGDSGGPHVTRFKDT-YFVTGIVSWGEGCAR 211

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia} Length = 394

 Score = 74.9 bits (184), Expect = 2e-17
 Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 33  TGDSGGPLLLQRP--DKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           TGD G PL    P    ++  +G+V+WGIGCG    PGVY  V  +  WI   
Sbjct: 329 TGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHFRNWIDQE 381

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia} Length = 394

 Score = 54.8 bits (132), Expect = 3e-10
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 83  KGDSGGPLLLQRP--DKQWTIIGVVSWGIGCAQ 113
            GD G PL    P    ++  +G+V+WGIGC  
Sbjct: 329 TGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGD 361

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ... Length = 254

 Score = 73.4 bits (181), Expect = 2e-17
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKGDSGGPLL 91
           GDSGGP         W + G+VSWG GC      GVY +V++Y+ W+    + +    +L
Sbjct: 190 GDSGGPHATHYRGT-WYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSEPRPGVL 248

Query: 92  LQRP 95
           L+ P
Sbjct: 249 LRAP 252

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ... Length = 254

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           KGDSGGP         W + G+VSWG GCA 
Sbjct: 189 KGDSGGPHATHYRGT-WYLTGIVSWGQGCAT 218

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens} Length = 232

 Score = 72.6 bits (179), Expect = 4e-17
 Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIY 79
           GDSGGPL+       W + G+VSWG  C K   PGVY +V     WI 
Sbjct: 180 GDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWIT 227

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens} Length = 232

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 15/31 (48%), Positives = 20/31 (64%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL+       W + G+VSWG  CA+
Sbjct: 179 QGDSGGPLVSSDARDIWYLAGIVSWGDECAK 209

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A* Length = 252

 Score = 72.7 bits (179), Expect = 4e-17
 Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGPL+     +  T++G++SWG+GCG+   PGVY +V  YL WI + 
Sbjct: 201 GDSGGPLVCLNDGR-MTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDN 249

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A* Length = 252

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL+     +  T++G++SWG+GC Q
Sbjct: 200 QGDSGGPLVCLNDGR-MTLVGIISWGLGCGQ 229

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_B Length = 251

 Score = 72.7 bits (179), Expect = 5e-17
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 34  GDSGGPLL-LQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGP++ L R   QW ++G VSWG  CGK    GVY  ++    WI   
Sbjct: 196 GDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRV 246

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_B Length = 251

 Score = 53.4 bits (129), Expect = 6e-10
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)

Query: 83  KGDSGGPLL-LQRPDKQWTIIGVVSWGIGCAQ 113
            GDSGGP++ L R   QW ++G VSWG  C +
Sbjct: 195 AGDSGGPMVTLNRERGQWYLVGTVSWGDDCGK 226

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ... Length = 97

 Score = 69.1 bits (170), Expect = 6e-17
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 34 GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
          GDSGGPL+ ++ +  WT++G+VSWG     T  PGVY +V   + W+  T
Sbjct: 45 GDSGGPLVCKK-NGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQT 93

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ... Length = 97

 Score = 50.2 bits (121), Expect = 1e-09
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
            GDSGGPL+ ++ +  WT++G+VSWG     
Sbjct: 44  MGDSGGPLVCKK-NGAWTLVGIVSWGSSTCS 73

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B Length = 235

 Score = 72.2 bits (178), Expect = 6e-17
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGPL+ Q  + +W + GV S+G  C     PGVY +V+++  WI + 
Sbjct: 185 GDSGGPLMCQE-NNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQSF 233

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B Length = 235

 Score = 53.0 bits (128), Expect = 8e-10
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL+ Q  + +W + GV S+G  CA 
Sbjct: 184 QGDSGGPLMCQE-NNRWFLAGVTSFGYECAL 213

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C* Length = 235

 Score = 71.8 bits (177), Expect = 8e-17
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGP + +       + G++SWG  C      G+Y +V++Y+ WI   
Sbjct: 183 GDSGGPHVTEVEGT-SFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C* Length = 235

 Score = 52.6 bits (127), Expect = 1e-09
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGP + +       + G++SWG  CA 
Sbjct: 182 QGDSGGPHVTEVEGT-SFLTGIISWGEECAM 211

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A* Length = 372

 Score = 73.2 bits (180), Expect = 8e-17
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 5/61 (8%)

Query: 34  GDSGGPLLLQRP---DKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKGDSGG 88
           GDSGGP + +       +W + G+VSWG GC     PGVY +V+ +  WI+   K  S  
Sbjct: 306 GDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEA 365

Query: 89  P 89
            
Sbjct: 366 S 366

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A* Length = 372

 Score = 51.7 bits (124), Expect = 3e-09
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)

Query: 83  KGDSGGPLLLQRP---DKQWTIIGVVSWGIGCAQVLK 116
           +GDSGGP + +       +W + G+VSWG GCA   K
Sbjct: 305 QGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQK 341

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H* Length = 250

 Score = 71.9 bits (177), Expect = 1e-16
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNTAKGDSG 87
           GDSGGP++       W ++G+VSWG GCG     GVY +V++YL WI+   +    
Sbjct: 189 GDSGGPMVASF-HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIRDKEA 243

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H* Length = 250

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGP++       W ++G+VSWG GC  
Sbjct: 188 EGDSGGPMVASF-HGTWFLVGLVSWGEGCGL 217

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ... Length = 247

 Score = 71.1 bits (175), Expect = 2e-16
 Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGPL+     +  T+ G+VSWG GC     PGVY +V+ +L WI + 
Sbjct: 196 GDSGGPLVCSLQGR-MTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSH 244

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ... Length = 247

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL+     +  T+ G+VSWG GCA 
Sbjct: 195 QGDSGGPLVCSLQGR-MTLTGIVSWGRGCAL 224

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score = 72.6 bits (178), Expect = 2e-16
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKG 84
           GDSGGPL  +  ++ W ++G+ SWG GC +   PGVY  V +Y+ WI    + 
Sbjct: 573 GDSGGPLSCKH-NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQA 624

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score = 53.3 bits (128), Expect = 1e-09
 Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           KGDSGGPL  +  ++ W ++G+ SWG GCAQ
Sbjct: 572 KGDSGGPLSCKH-NEVWHLVGITSWGEGCAQ 601

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A* Length = 290

 Score = 71.6 bits (176), Expect = 2e-16
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 34  GDSGGPLLLQRP-DKQWTIIGVVSWGIGCG--KTPGVYVQVNKYLRWIYNTAKGDSGGPL 90
           GDSGGPL+ +   +  + ++G+ SWG+GC   K PGVY     YL WI +     +   +
Sbjct: 197 GDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASKIGSTAVHMI 256

Query: 91  LLQRPDKQWT 100
            L       T
Sbjct: 257 QLPTASPAST 266

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A* Length = 290

 Score = 52.0 bits (125), Expect = 3e-09
 Identities = 14/32 (43%), Positives = 24/32 (75%), Gaps = 1/32 (3%)

Query: 83  KGDSGGPLLLQRP-DKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL+ +   +  + ++G+ SWG+GCA+
Sbjct: 196 QGDSGGPLMCKDSAENSYVVVGITSWGVGCAR 227

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A* Length = 248

 Score = 71.1 bits (175), Expect = 2e-16
 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGPL  ++      + G++SWG GCG+   PGVY +V  Y+ WI + 
Sbjct: 189 GDSGGPLACEKNGV-AYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDR 237

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A* Length = 248

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL  ++      + G++SWG GC +
Sbjct: 188 QGDSGGPLACEKNGV-AYLYGIISWGDGCGR 217

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A* Length = 241

 Score = 70.7 bits (174), Expect = 2e-16
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKGDSG 87
           GDSGGPL+ +  +  W ++G+ SWG GC +   PGVY +V +Y+ WI    +   G
Sbjct: 186 GDSGGPLVCKH-NGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKTQSSDG 240

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A* Length = 241

 Score = 50.7 bits (122), Expect = 6e-09
 Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           KGDSGGPL+ +  +  W ++G+ SWG GCA+
Sbjct: 185 KGDSGGPLVCKH-NGMWRLVGITSWGEGCAR 214

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A Length = 283

 Score = 71.2 bits (175), Expect = 3e-16
 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGPL  ++      + G++SWG GCG+   PGVY +V  Y+ WI + 
Sbjct: 224 GDSGGPLACEKNGV-AYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDR 272

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A Length = 283

 Score = 51.2 bits (123), Expect = 6e-09
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL  ++      + G++SWG GC +
Sbjct: 223 QGDSGGPLACEKNGV-AYLYGIISWGDGCGR 252

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score = 70.9 bits (174), Expect = 7e-16
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 34  GDSGGPLLLQRP-DKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGG L+      ++W + G+VSWG + CG+    GVY +V  Y+ WI N 
Sbjct: 348 GDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENI 399

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 83  KGDSGGPLLLQRP-DKQWTIIGVVSWG-IGCAQ 113
           +GDSGG L+      ++W + G+VSWG + C +
Sbjct: 347 RGDSGGALVFLDSETERWFVGGIVSWGSMNCGE 379

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A* Length = 224

 Score = 69.1 bits (170), Expect = 9e-16
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNT 81
           GDSGGPLL           G+VS+G   G  P V+ +V+ +L WI  T
Sbjct: 179 GDSGGPLLCN-----NVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRTT 221

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A* Length = 224

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 5/31 (16%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           KGDSGGPLL           G+VS+G     
Sbjct: 178 KGDSGGPLLCN-----NVAHGIVSYGKSSGV 203

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 242

 Score = 69.2 bits (170), Expect = 1e-15
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 34  GDSGGPLLLQ-RPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGG L+      ++W + G+VSWG + CG+    GVY +V  Y+ WI N 
Sbjct: 187 GDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENI 238

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 242

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 83  KGDSGGPLLLQ-RPDKQWTIIGVVSWG-IGCAQ 113
           +GDSGG L+      ++W + G+VSWG + C +
Sbjct: 186 RGDSGGALVFLDSETERWFVGGIVSWGSMNCGE 218

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ... Length = 238

 Score = 68.8 bits (169), Expect = 1e-15
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKG 84
           GDSGGPL  +  +  W ++G+ SWG GC +   PGVY  V +Y+ WI    + 
Sbjct: 186 GDSGGPLSCKHNEV-WHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQA 237

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ... Length = 238

 Score = 50.3 bits (121), Expect = 7e-09
 Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           KGDSGGPL  +  +  W ++G+ SWG GCAQ
Sbjct: 185 KGDSGGPLSCKHNEV-WHLVGITSWGEGCAQ 214

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2 Length = 224

 Score = 68.7 bits (169), Expect = 1e-15
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNT 81
           GDSGGPLL           G+VS+G    K P ++ +V+ Y+ WI   
Sbjct: 180 GDSGGPLLCA-----GVAHGIVSYGHPDAKPPAIFTRVSTYVPWINAV 222

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2 Length = 224

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 5/31 (16%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
            GDSGGPLL           G+VS+G   A+
Sbjct: 179 MGDSGGPLLCA-----GVAHGIVSYGHPDAK 204

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A* Length = 225

 Score = 68.7 bits (169), Expect = 1e-15
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 6/57 (10%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG-CGKTPGVYVQVNKYLRWIYNTAKGDSGGP 89
           GD G PL+ +         GV S+ +G CG+ P  + +V  +  WI         GP
Sbjct: 173 GDGGTPLVCE-----GLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNNPGPGP 224

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A* Length = 225

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 5/31 (16%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
            GD G PL+ +         GV S+ +G   
Sbjct: 172 NGDGGTPLVCE-----GLAHGVASFSLGPCG 197

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A Length = 227

 Score = 68.7 bits (169), Expect = 1e-15
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNT 81
           GDSGGPL+           G+VS+G   G  P    +V+ ++ WI  T
Sbjct: 181 GDSGGPLVCN-----KVAQGIVSYGRNNGMPPRACTKVSSFVHWIKKT 223

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A Length = 227

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 5/31 (16%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           KGDSGGPL+           G+VS+G     
Sbjct: 180 KGDSGGPLVCN-----KVAQGIVSYGRNNGM 205

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A* Length = 261

 Score = 69.2 bits (170), Expect = 1e-15
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKGDSGGPL 90
           GDSGGPL        W + G+VSWG  CG    PGVY   + Y  WI +         +
Sbjct: 192 GDSGGPLSCPVEGL-WYLTGIVSWGDACGARNRPGVYTLASSYASWIQSKVTELQPRVV 249

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A* Length = 261

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL        W + G+VSWG  C  
Sbjct: 191 QGDSGGPLSCPVEGL-WYLTGIVSWGDACGA 220

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2 Length = 227

 Score = 68.7 bits (169), Expect = 1e-15
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 5/48 (10%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNT 81
           GDSGGPL+           G+VS+G   G TP VY +++ +L WI++T
Sbjct: 180 GDSGGPLVCN-----GVAQGIVSYGRNDGTTPDVYTRISSFLSWIHST 222

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2 Length = 227

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 5/31 (16%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
            GDSGGPL+           G+VS+G     
Sbjct: 179 SGDSGGPLVCN-----GVAQGIVSYGRNDGT 204

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A* Length = 224

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTA 82
           GDSGGP++        T+IG VSWG GC +    GVY  V     +I   A
Sbjct: 178 GDSGGPIVDSS----NTLIGAVSWGNGCARPNYSGVYASVGALRSFIDTYA 224

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A* Length = 224

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 4/30 (13%)

Query: 84  GDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           GDSGGP++        T+IG VSWG GCA+
Sbjct: 178 GDSGGPIVDSS----NTLIGAVSWGNGCAR 203

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A Length = 247

 Score = 68.8 bits (169), Expect = 2e-15
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCG--KTPGVYVQVNKYLRWIYNT 81
           GD+GGPL+    DK + + GV SWG+GC     PGVYV+V++++ WI   
Sbjct: 195 GDAGGPLVCFEKDK-YILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGV 243

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A Length = 247

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLK 116
           +GD+GGPL+    DK + + GV SWG+GCA+  K
Sbjct: 194 QGDAGGPLVCFEKDK-YILQGVTSWGLGCARPNK 226

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A Length = 226

 Score = 68.3 bits (168), Expect = 2e-15
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNT 81
           GDSGGPLL           G+VS+G    K P V+ +++ Y  WI   
Sbjct: 180 GDSGGPLLCA-----GVAQGIVSYGRSDAKPPAVFTRISHYRPWINQI 222

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A Length = 226

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           KGDSGGPLL           G+VS+G   A+
Sbjct: 179 KGDSGGPLLCA-----GVAQGIVSYGRSDAK 204

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ... Length = 245

 Score = 68.4 bits (168), Expect = 2e-15
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCG--KTPGVYVQVNKYLRWIYNT 81
           GDSGGPL+ ++ +  WT++G+VSWG       TPGVY +V   + W+  T
Sbjct: 193 GDSGGPLVCKK-NGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQT 241

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ... Length = 245

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
            GDSGGPL+ ++ +  WT++G+VSWG     
Sbjct: 192 MGDSGGPLVCKK-NGAWTLVGIVSWGSSTCS 221

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A Length = 791

 Score = 69.7 bits (170), Expect = 2e-15
 Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCG--KTPGVYVQVNKYLRWIYNT 81
           GDSGGPL+    DK + + GV SWG+GC     PGVYV+V++++ WI   
Sbjct: 739 GDSGGPLVCFEKDK-YILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGV 787

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A Length = 791

 Score = 52.7 bits (126), Expect = 2e-09
 Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)

Query: 74  YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +L    ++ +GDSGGPL+    DK + + GV SWG+GCA+
Sbjct: 729 HLAGGTDSCQGDSGGPLVCFEKDK-YILQGVTSWGLGCAR 767

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2 Length = 237

 Score = 68.4 bits (168), Expect = 2e-15
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTA 82
           GDSGGPL          + G+VSWG GC +   PGVY +V+ ++ WI   A
Sbjct: 187 GDSGGPLAASD-TGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKANA 236

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2 Length = 237

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL          + G+VSWG GCA+
Sbjct: 186 QGDSGGPLAASD-TGSTYLAGIVSWGYGCAR 215

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A Length = 240

 Score = 68.0 bits (167), Expect = 2e-15
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCG--KTPGVYVQVNKYLRWIYNT 81
           GD GGPL+ ++  K   ++GV+  G GC     PG++V+V  Y +WI+  
Sbjct: 177 GDYGGPLVCEQ-HKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKI 225

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A Length = 240

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GD GGPL+ ++  K   ++GV+  G GCA 
Sbjct: 176 EGDYGGPLVCEQ-HKMRMVLGVIVPGRGCAI 205

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} Length = 228

 Score = 68.0 bits (167), Expect = 3e-15
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK-TPGVYVQVNKYLRWIYNTAK 83
           GD+G P + Q      T++GV ++     +  P V+ +V  Y+ WI +  K
Sbjct: 181 GDAGDPTVQQ-----DTLVGVAAYFPKRPEGAPEVFTKVGSYVSWIQDIIK 226

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} Length = 228

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 5/31 (16%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
            GD+G P + Q      T++GV ++     +
Sbjct: 180 SGDAGDPTVQQ-----DTLVGVAAYFPKRPE 205

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} PDB: 3g01_A Length = 227

 Score = 67.9 bits (167), Expect = 3e-15
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNT 81
            DSGGPL+ +         G+VS+G   G  P V+ +V  ++ WI  T
Sbjct: 182 EDSGGPLVCK-----RAAAGIVSYGQTDGSAPQVFTRVLSFVSWIKKT 224

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} PDB: 3g01_A Length = 227

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 5/31 (16%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           + DSGGPL+ +         G+VS+G     
Sbjct: 181 EEDSGGPLVCK-----RAAAGIVSYGQTDGS 206

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2 Length = 241

 Score = 67.6 bits (166), Expect = 4e-15
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 4/52 (7%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWG--IGCG--KTPGVYVQVNKYLRWIYNT 81
           GDSGGPL  Q  + QW + G+VS+G  +GC     P V+ +V+ Y+ WI + 
Sbjct: 186 GDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSV 237

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2 Length = 241

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWG--IGCAQVLK 116
            GDSGGPL  Q  + QW + G+VS+G  +GC    K
Sbjct: 185 NGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHK 220

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A* Length = 245

 Score = 67.7 bits (166), Expect = 4e-15
 Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 3/50 (6%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGPL+ +  +  W   GVVSWG GC +   PG+Y +V  YL WI++ 
Sbjct: 192 GDSGGPLVCKV-NGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHY 240

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A* Length = 245

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GDSGGPL+ +  +  W   GVVSWG GCAQ
Sbjct: 191 QGDSGGPLVCKV-NGTWLQAGVVSWGEGCAQ 220

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis} Length = 235

 Score = 67.2 bits (165), Expect = 4e-15
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK-TPGVYVQVNKYLRWIYNT 81
           GD+G P +     +  T++GV S+        P V+++V  Y+  I + 
Sbjct: 184 GDAGDPAV-----QNGTLVGVASYISSMPSEFPSVFLRVGYYVLDIKDI 227

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis} Length = 235

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 5/30 (16%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCA 112
            GD+G P +     +  T++GV S+     
Sbjct: 183 YGDAGDPAV-----QNGTLVGVASYISSMP 207

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens} Length = 234

 Score = 66.9 bits (164), Expect = 7e-15
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCG--KTPGVYVQVNKYLRWIYNTAKGDSGGP 89
           GD GGPL     +  W + G++     C   + P V+ +V+ ++ WI+   +      
Sbjct: 176 GDYGGPLACFTHNS-WVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVMRLGHHHH 232

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens} Length = 234

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +GD GGPL     +  W + G++     CA+
Sbjct: 175 EGDYGGPLACFTHNS-WVLEGIIIPNRVCAR 204

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C Length = 240

 Score = 66.5 bits (163), Expect = 8e-15
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSW--GIGCG--KTPGVYVQVNKYLRWIYNT 81
           GDSGGPL     D  W + GV S+    GC   K P V+ +V+ ++ WI  T
Sbjct: 185 GDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDET 236

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C Length = 240

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSW--GIGCAQVLK 116
            GDSGGPL     D  W + GV S+    GC  + K
Sbjct: 184 NGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKK 219

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497

 Score = 67.6 bits (165), Expect = 1e-14
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 13/67 (19%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK----------TPGVYVQVNKYLRWIYNT 81
           GDSGGPL++ +   ++  +GV+SWG+   C                ++ + + L W+   
Sbjct: 430 GDSGGPLIVHK-RSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEK 488

Query: 82  AKGDSGG 88
            + +  G
Sbjct: 489 LQDEDLG 495

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497

 Score = 51.4 bits (123), Expect = 6e-09
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 3/33 (9%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQ 113
           +GDSGGPL++ +   ++  +GV+SWG+   C  
Sbjct: 429 RGDSGGPLIVHK-RSRFIQVGVISWGVVDVCKN 460

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2 Length = 228

 Score = 66.0 bits (162), Expect = 1e-14
 Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 7/55 (12%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNTAKGDS 86
           GDSGGP++         + GVVSWG GC +   PGVY +V  Y++WI NT   +S
Sbjct: 179 GDSGGPVVCN-----GQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAANS 228

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2 Length = 228

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 5/34 (14%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLK 116
           +GDSGGP++         + GVVSWG GCAQ  K
Sbjct: 178 QGDSGGPVVCN-----GQLQGVVSWGDGCAQKNK 206

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster} Length = 408

 Score = 67.2 bits (164), Expect = 2e-14
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 8/56 (14%)

Query: 34  GDSGGPLLLQ-----RPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGPL            +    G+VS G + CG+   PG+Y  V +Y++WI +T
Sbjct: 316 GDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITDT 371

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster} Length = 408

 Score = 46.8 bits (111), Expect = 2e-07
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 6/37 (16%)

Query: 83  KGDSGGPLLLQ-----RPDKQWTIIGVVSWG-IGCAQ 113
           KGDSGGPL            +    G+VS G + C Q
Sbjct: 315 KGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQ 351

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ... Length = 223

 Score = 65.6 bits (161), Expect = 2e-14
 Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 7/50 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
           GDSGGP++         + G+VSWG GC +   PGVY +V  Y+ WI  T
Sbjct: 175 GDSGGPVVCS-----GKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQT 219

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ... Length = 223

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 5/34 (14%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLK 116
           +GDSGGP++         + G+VSWG GCAQ  K
Sbjct: 174 QGDSGGPVVCS-----GKLQGIVSWGSGCAQKNK 202

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2 Length = 222

 Score = 65.3 bits (160), Expect = 2e-14
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK-TPGVYVQVNKYLRWIYNTAK 83
           GDSGGPL+          IG+VS+G  C    P VY +V+ ++ WI    K
Sbjct: 176 GDSGGPLVAN-----GAQIGIVSFGSPCALGEPDVYTRVSSFVSWINANLK 221

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2 Length = 222

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)

Query: 84  GDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           GDSGGPL+          IG+VS+G  CA 
Sbjct: 176 GDSGGPLVAN-----GAQIGIVSFGSPCAL 200

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A Length = 222

 Score = 64.4 bits (158), Expect = 4e-14
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 7/50 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
           GDSGGP++         + GVVSWG GC +   PGVY +V  +  W+ +T
Sbjct: 174 GDSGGPVVCN-----GELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTST 218

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A Length = 222

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 5/34 (14%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLK 116
           +GDSGGP++         + GVVSWG GCA+   
Sbjct: 173 QGDSGGPVVCN-----GELQGVVSWGYGCAEPGN 201

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score = 65.1 bits (158), Expect = 8e-14
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 13/67 (19%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCG------------KTPGVYVQVNKYLRWIYNT 81
           GDSGGPL++ +   ++  +GV+SWG+                    ++ + + L W+   
Sbjct: 672 GDSGGPLIVHK-RSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEK 730

Query: 82  AKGDSGG 88
            + +  G
Sbjct: 731 LQDEDLG 737

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score = 50.1 bits (119), Expect = 2e-08
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 3/33 (9%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQ 113
           +GDSGGPL++ +   ++  +GV+SWG+   C  
Sbjct: 671 RGDSGGPLIVHK-RSRFIQVGVISWGVVDVCKN 702

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys} Length = 238

 Score = 63.7 bits (156), Expect = 9e-14
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 8/59 (13%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG-CGKT--PGVYVQVNKYLRWIYNTAKGDSGGP 89
           GDSGGPL+           G+ SWG   C +   P  Y +V  +L WI N   G++   
Sbjct: 182 GDSGGPLICN-----GQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAGNTDAS 235

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys} Length = 238

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQVLK 116
           KGDSGGPL+           G+ SWG   CAQ  K
Sbjct: 181 KGDSGGPLICN-----GQFQGIASWGDDPCAQPHK 210

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A Length = 240

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 8/51 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCG--KTPGVYVQV-NKYLRWIYNT 81
           GD+GGPL+ +          +VS G  CG    PG+Y  +  KY  WI + 
Sbjct: 188 GDAGGPLICK-----GVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSN 233

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A Length = 240

 Score = 44.9 bits (107), Expect = 6e-07
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 5/31 (16%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           KGD+GGPL+ +          +VS G  C  
Sbjct: 187 KGDAGGPLICK-----GVFHAIVSGGHECGV 212

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 64.0 bits (156), Expect = 1e-13
 Identities = 8/50 (16%), Positives = 16/50 (32%), Gaps = 4/50 (8%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
              G  +  +     W + GV+      G      +  +V++Y  W    
Sbjct: 227 WMDGSVVT-REHRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLWFKQI 274

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 44.7 bits (106), Expect = 9e-07
 Identities = 4/34 (11%), Positives = 8/34 (23%), Gaps = 2/34 (5%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLK 116
               G  +  +     W + GV+           
Sbjct: 226 HWMDGSVVT-REHRGSWFLTGVLGSQ-PVGGQAH 257

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2 Length = 251

 Score = 63.4 bits (155), Expect = 2e-13
 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 5/52 (9%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG--CG--KTPGVYVQVNKYLRWIYNT 81
           GDSGGPL  Q  D QW + G+VS+G G  C   K P V+ +V+ Y+ WI   
Sbjct: 198 GDSGGPLNCQA-DGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQK 248

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2 Length = 251

 Score = 45.3 bits (108), Expect = 5e-07
 Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIG--CAQVLK 116
            GDSGGPL  Q  D QW + G+VS+G G  C    K
Sbjct: 197 NGDSGGPLNCQA-DGQWDVRGIVSFGSGLSCNTFKK 231

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens} Length = 238

 Score = 62.6 bits (153), Expect = 2e-13
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 8/56 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWG-IGCG--KTPGVYVQVNKYLRWIYNTAKGDS 86
           GDSGGPL+         + GV SWG + CG    P V V+V  Y++WI +T   +S
Sbjct: 188 GDSGGPLMCD-----GVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIAENS 238

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens} Length = 238

 Score = 42.2 bits (100), Expect = 6e-06
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQVLK 116
            GDSGGPL+         + GV SWG + C    K
Sbjct: 187 VGDSGGPLMC-----DGVLQGVTSWGYVPCGTPNK 216

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A* Length = 234

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 8/51 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGI-GCGKT--PGVYVQVNKYLRWIYNT 81
           GDSGGPL+         + G+V+ G   CG+   P VY +V  Y  WI + 
Sbjct: 178 GDSGGPLICN-----GEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSI 223

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A* Length = 234

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQVLK 116
            GDSGGPL+         + G+V+ G   C Q LK
Sbjct: 177 HGDSGGPLICN-----GEMHGIVAGGSEPCGQHLK 206

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A Length = 224

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 8/51 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYLRWIYNT 81
           GDSGGPL+ +      T+ G+VSWG   CG+   PGVY QV K+ +WI +T
Sbjct: 174 GDSGGPLVCR-----GTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDT 219

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A Length = 224

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQVLK 116
            GDSGGPL+ +      T+ G+VSWG   C Q   
Sbjct: 173 NGDSGGPLVCR-----GTLQGLVSWGTFPCGQPND 202

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ... Length = 240

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWG--IGCG--KTPGVYVQVNKYLRWIYNT 81
           GDSGGPL     + Q+ + GV S+   +GC   + P V+ +V+ Y+ WI N 
Sbjct: 186 GDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNV 236

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ... Length = 240

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWG--IGCAQ 113
           +GDSGGPL     + Q+ + GV S+   +GC  
Sbjct: 185 QGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNV 216

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 63.2 bits (154), Expect = 3e-13
 Identities = 8/50 (16%), Positives = 16/50 (32%), Gaps = 4/50 (8%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNT 81
              G  +  +     W + GV+      G      +  +V++Y  W    
Sbjct: 268 WMDGSVVTREHRGS-WFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLWFKQI 315

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 4/34 (11%), Positives = 8/34 (23%), Gaps = 2/34 (5%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLK 116
               G  +  +     W + GV+           
Sbjct: 267 HWMDGSVVTREHRGS-WFLTGVLGSQ-PVGGQAH 298

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A Length = 240

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG-CG--KTPGVYVQVNKYLRWIYNTAKGDS 86
           GDSGGPL+     K   + GV+S+    C     P V   V  Y+ WI       +
Sbjct: 180 GDSGGPLVCG---KGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGRSA 232

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A Length = 240

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 4/35 (11%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQVLK 116
           KGDSGGPL+     K   + GV+S+    C  + K
Sbjct: 179 KGDSGGPLVCG---KGRVLAGVLSFSSRVCTDIFK 210

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2 Length = 236

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSW--GIGCG--KTPGVYVQVNKYLRWIYNT 81
           GDSGGPL  Q  +  + + GV S+    GC   K P V+ +V+ Y+ W+   
Sbjct: 185 GDSGGPLNCQV-NGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGI 235

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2 Length = 236

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSW--GIGCAQ 113
            GDSGGPL  Q  +  + + GV S+    GC  
Sbjct: 184 NGDSGGPLNCQV-NGSYYVHGVTSFVSSSGCNA 215

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G* Length = 237

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 8/56 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWG-IGCG--KTPGVYVQVNKYLRWIYNTAKGDS 86
            DSGGPL+         + G  S+G + CG    P +Y  + K+  WI +T   ++
Sbjct: 187 DDSGGPLICD-----GILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMMKNA 237

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G* Length = 237

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQVLK 116
           + DSGGPL+         + G  S+G + C +   
Sbjct: 186 RDDSGGPLICD-----GILQGTTSYGPVPCGKPGV 215

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A* Length = 234

 Score = 61.8 bits (151), Expect = 4e-13
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 8/56 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYLRWIYNTAKGDS 86
           GDSGGPL+           G+VS+G   CG+   PGVY +V  Y  WI +   G++
Sbjct: 178 GDSGGPLICN-----GQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAGNT 228

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A* Length = 234

 Score = 42.2 bits (100), Expect = 6e-06
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQVLK 116
            GDSGGPL+           G+VS+G   C Q LK
Sbjct: 177 GGDSGGPLICN-----GQFQGIVSFGAHPCGQGLK 206

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2 Length = 241

 Score = 61.9 bits (151), Expect = 5e-13
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 8/55 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSW----GIGCG--KTPGVYVQVNKYLRWIYNTA 82
           GDSGGPL     D    ++GV SW    G+G      P VY +V+ YL WI + +
Sbjct: 189 GDSGGPLNCP--DGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGDNS 241

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2 Length = 241

 Score = 45.3 bits (108), Expect = 6e-07
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSW----GIGCAQ 113
            GDSGGPL     D    ++GV SW    G+G   
Sbjct: 188 NGDSGGPLNCP--DGGTRVVGVTSWVVSSGLGACL 220

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A* Length = 223

 Score = 61.4 bits (150), Expect = 6e-13
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 8/54 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG-CG--KTPGVYVQVNKYLRWIYNTAKG 84
           GDSGGPL+         + G+VS+G   CG    PGVY  + K+  WI  T + 
Sbjct: 175 GDSGGPLICN-----GYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQA 223

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A* Length = 223

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQVLK 116
            GDSGGPL+         + G+VS+G   C QV  
Sbjct: 174 NGDSGGPLICN-----GYLQGLVSFGKAPCGQVGV 203

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A* Length = 227

 Score = 61.4 bits (150), Expect = 7e-13
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 8/56 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWG-IGCGKT--PGVYVQVNKYLRWIYNTAKGDS 86
           GDSGGP++        ++ G+VSWG   C +   PGVY  + K+ +WI  T + +S
Sbjct: 177 GDSGGPVVCN-----GSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQANS 227

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A* Length = 227

 Score = 42.5 bits (101), Expect = 6e-06
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQVLK 116
           +GDSGGP++        ++ G+VSWG   CA+  +
Sbjct: 176 QGDSGGPVVCN-----GSLQGLVSWGDYPCARPNR 205

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2 Length = 226

 Score = 61.4 bits (150), Expect = 7e-13
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 8/51 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCG---KTPGVYVQVNKYLRWIYNT 81
           GDSGGPL            G+ S+G   G     P  + +V  +L WI   
Sbjct: 176 GDSGGPLNYN-----GLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQ 221

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2 Length = 226

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 10/28 (35%), Positives = 12/28 (42%), Gaps = 5/28 (17%)

Query: 84  GDSGGPLLLQRPDKQWTIIGVVSWGIGC 111
           GDSGGPL            G+ S+G   
Sbjct: 176 GDSGGPLNYN-----GLTYGITSFGAAA 198

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P* Length = 237

 Score = 61.5 bits (150), Expect = 8e-13
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 8/51 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGI-GCG--KTPGVYVQVNKYLRWIYNT 81
           GDSGGPL+         + G+ SWG   C   + P +Y +V  Y +WI +T
Sbjct: 187 GDSGGPLVCN-----GVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDT 232

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P* Length = 237

 Score = 42.2 bits (100), Expect = 7e-06
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQVLK 116
            GDSGGPL+         + G+ SWG   CA   +
Sbjct: 186 SGDSGGPLVCN-----GVLQGITSWGSEPCALPER 215

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2 Length = 225

 Score = 61.0 bits (149), Expect = 9e-13
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 8/51 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG-CG--KTPGVYVQVNKYLRWIYNT 81
           GDSGGPL+         + G+ SWG   CG  + PGVY ++ +Y  WI  T
Sbjct: 178 GDSGGPLVCD-----GMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKT 223

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2 Length = 225

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQVLK 116
           +GDSGGPL+         + G+ SWG   C +  K
Sbjct: 177 QGDSGGPLVCD-----GMLQGITSWGSDPCGKPEK 206

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A* Length = 231

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 8/56 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGI-GCG--KTPGVYVQVNKYLRWIYNTAKGDS 86
           GDSGGPL+           G++S G   C   + PG+Y +V  Y  WI +   G++
Sbjct: 175 GDSGGPLICN-----GQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISGNT 225

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A* Length = 231

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 6/32 (18%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQ 113
           KGDSGGPL+           G++S G   CAQ
Sbjct: 174 KGDSGGPLIC-----NGQFQGILSVGGNPCAQ 200

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2 Length = 235

 Score = 60.7 bits (148), Expect = 1e-12
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 8/54 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG-CG--KTPGVYVQVNKYLRWIYNTAKG 84
           GDSGGPL+         + G+ S G   C   KTP +Y ++ K+  WI    K 
Sbjct: 185 GDSGGPLI-----CDGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKE 233

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2 Length = 235

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQVLK 116
            GDSGGPL+         + G+ S G   CA+   
Sbjct: 184 AGDSGGPLI-----CDGVLQGITSGGATPCAKPKT 213

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A Length = 228

 Score = 60.6 bits (148), Expect = 1e-12
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 8/51 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG-CG--KTPGVYVQVNKYLRWIYNT 81
           GD+GGPL+         + GVV+ G   CG  K PG+Y +V  Y  WI + 
Sbjct: 181 GDAGGPLVCG-----GVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSV 226

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A Length = 228

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQVLK 116
           KGD+GGPL+         + GVV+ G   C    K
Sbjct: 180 KGDAGGPLVCG-----GVLEGVVTSGSRVCGNRKK 209

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A* Length = 218

 Score = 60.2 bits (147), Expect = 1e-12
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 8/51 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWG-IGCG--KTPGVYVQVNKYLRWIYNT 81
           GDSG PL+         I G+ S+   GC     P  +  V +++ WI + 
Sbjct: 171 GDSGSPLVCN-----GLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSI 216

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A* Length = 218

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQVLK 116
            GDSG PL+         I G+ S+   GCA  L 
Sbjct: 170 FGDSGSPLVCN-----GLIHGIASFVRGGCASGLY 199

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2 Length = 240

 Score = 60.7 bits (148), Expect = 2e-12
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 8/51 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGI-GCG--KTPGVYVQVNKYLRWIYNT 81
            DSGGPL+         + G+ SWG   CG    P VY ++ K+  WI  T
Sbjct: 190 HDSGGPLICD-----GILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRET 235

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2 Length = 240

 Score = 42.2 bits (100), Expect = 7e-06
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQVLK 116
           + DSGGPL+         + G+ SWG   C +  +
Sbjct: 189 EHDSGGPLICD-----GILQGITSWGPEPCGEPTE 218

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2 Length = 221

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 8/53 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGI-GCG--KTPGVYVQVNKYLRWIYNTAK 83
           GDSGGPL+         I G+ S+ I GC     P  + +V  Y+ WI +T +
Sbjct: 174 GDSGGPLICD-----GIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTLR 221

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2 Length = 221

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQVLK 116
            GDSGGPL+         I G+ S+ I GCA  L 
Sbjct: 173 FGDSGGPLIC-----DGIIQGIDSFVIWGCATRLF 202

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A* Length = 223

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 8/54 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWG-IGCG--KTPGVYVQVNKYLRWIYNTAKG 84
           GDSGGPL+         + G+VSWG I CG  + PGVY  V +Y  WI  T + 
Sbjct: 174 GDSGGPLVCG-----DHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQA 222

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A* Length = 223

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQVLK 116
           +GDSGGPL+         + G+VSWG I C    K
Sbjct: 173 QGDSGGPLVC-----GDHLRGLVSWGNIPCGSKEK 202

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A Length = 230

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 6/50 (12%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCG---KTPGVYVQVNKYLRWIYN 80
           GDSGGP +L     +  +IGVVS+  G G     P  + +V  Y+ WI  
Sbjct: 178 GDSGGPFVLS---DKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQ 224

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A Length = 230

 Score = 42.2 bits (100), Expect = 7e-06
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)

Query: 84  GDSGGPLLLQRPDKQWTIIGVVSWGIGC 111
           GDSGGP +L     +  +IGVVS+  G 
Sbjct: 178 GDSGGPFVLS---DKNLLIGVVSFVSGA 202

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2 Length = 237

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 8/56 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG-CG--KTPGVYVQVNKYLRWIYNTAKGDS 86
           GDSGG L+           G+ SWG   C       V+ +V  + +WI  T + +S
Sbjct: 187 GDSGGALICD-----GVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIEKNS 237

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2 Length = 237

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQVLK 116
            GDSGG L+           G+ SWG   CA    
Sbjct: 186 LGDSGGALIC-----DGVFQGITSWGYSECADFND 215

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A* Length = 509

 Score = 59.2 bits (143), Expect = 9e-12
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 20/65 (30%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGI-----GCGK--------------TPGVYVQVNKY 74
           G+SGG + L+R   ++  +G+VSWG+     G                     ++ + + 
Sbjct: 434 GESGGAVFLER-RFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRM 492

Query: 75  LRWIY 79
             W+ 
Sbjct: 493 QPWLR 497

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A* Length = 509

 Score = 47.7 bits (113), Expect = 1e-07
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 6/36 (16%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGI-----GCAQ 113
           KG+SGG + L+R   ++  +G+VSWG+     G A 
Sbjct: 433 KGESGGAVFLER-RFRFFQVGLVSWGLYNPCLGSAD 467

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A Length = 234

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 10/56 (17%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGI--GCG--KTPGVYVQV-NKYLRWIYNTAKG 84
           GDSG PLL +         GV S+G+   CG  + PGVY+ +  K+L WI  T KG
Sbjct: 182 GDSGSPLLCE-----GVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIKG 232

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A Length = 234

 Score = 39.5 bits (93), Expect = 6e-05
 Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 7/36 (19%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQVLK 116
            GDSG PLL      +    GV S+G+   C     
Sbjct: 181 NGDSGSPLLC-----EGVFRGVTSFGLENKCGDPRG 211

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B Length = 152

 Score = 54.9 bits (133), Expect = 6e-11
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 8/51 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG-CGKT--PGVYVQVNKYLRWIYNT 81
           GDSGGPL+    +  W   G+ SWG   CG    P +Y ++  YL WI +T
Sbjct: 102 GDSGGPLIC---NGMWQ--GITSWGHTPCGSANKPSIYTKLIFYLDWIDDT 147

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B Length = 152

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 6/35 (17%)

Query: 83  KGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQVLK 116
            GDSGGPL+    +  W   G+ SWG   C    K
Sbjct: 101 MGDSGGPLIC---NGMWQ--GITSWGHTPCGSANK 130

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A Length = 215

 Score = 40.0 bits (93), Expect = 4e-05
 Identities = 14/91 (15%), Positives = 25/91 (27%), Gaps = 11/91 (12%)

Query: 31  AQTGDSGGPLLLQRPDKQWTIIG-------VVSWGIGCGKTPGVYVQVNKYLRWIYNTAK 83
              G      +         I G                 +  V  +      +  +T  
Sbjct: 109 NTVGYRSIRQVTNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDTNLAYYTIDTFS 168

Query: 84  GDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV 114
           G+SG  +L    D+   I+GV + G     +
Sbjct: 169 GNSGSAML----DQNQQIVGVHNAGYSNGTI 195

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A Length = 215

 Score = 39.2 bits (91), Expect = 7e-05
 Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 6/48 (12%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNK-YLRWIYN 80
           G+SG  +L    D+   I+GV + G   G T     +    ++ +I  
Sbjct: 169 GNSGSAML----DQNQQIVGVHNAGYSNG-TINGGPKATAAFVEFINY 211

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica} Length = 218

 Score = 37.0 bits (85), Expect = 4e-04
 Identities = 11/53 (20%), Positives = 14/53 (26%), Gaps = 1/53 (1%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDS 86
           G SGGP  L             S+G                 +  YN A   +
Sbjct: 167 GSSGGPWFLGN-GTGGAQNSTNSYGYTFLPNVMFGPYFGSGAQQNYNYASTTN 218

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	117
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	99.71
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	99.67
2vnt_A	276	Urokinase-type plasminogen activator; UPA, inhibit	99.62
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	99.61
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	99.6
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	99.58
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	99.58
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	99.57
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	99.57
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	99.57
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	99.57
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	99.57
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	99.57
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	99.57
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	99.57
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	99.57
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	99.57
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	99.57
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	99.57
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	99.56
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	99.56
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	99.56
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	99.56
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	99.55
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	99.55
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	99.55
1md8_A	329	C1R complement serine protease; innate immunity, a	99.55
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	99.55
1aut_C	250	Activated protein C; serine proteinase, plasma cal	99.55
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	99.55
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	99.54
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	99.54
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	99.54
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	99.54
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	99.53
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	99.53
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	99.52
1gpz_A	399	Complement C1R component; hydrolase, activation, i	99.52
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	99.52
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	99.52
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	99.51
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	99.51
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	99.51
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	99.51
1elv_A	333	Complement C1S component; trypsin-like serin prote	99.49
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	99.47
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	99.46
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	99.46
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	99.45
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	99.45
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	99.45
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	99.45
2xrc_A	565	Human complement factor I; immune system, hydrolas	99.44
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	99.44
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	99.44
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	99.43
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	99.43
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	99.43
4i8h_A	223	Cationic trypsin, beta-trypsin; serine protease, h	99.43
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	99.43
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	99.42
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	99.42
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	99.41
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	99.41
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	99.41
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	99.41
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	99.41
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	99.4
2aiq_A	231	Protein C activator; snake venom serine proteinase	99.4
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	99.4
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	99.4
1a7s_A	225	Heparin binding protein; serine protease homolog,	99.4
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	99.39
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	99.39
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	99.39
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	99.39
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	99.39
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	99.39
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	99.38
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	99.38
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	99.38
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	99.37
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	99.35
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	99.35
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	99.35
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	99.34
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	99.33
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	99.31
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	99.3
3hrz_D	741	Complement factor B; serine protease, glycosilated	99.3
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.29
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	99.29
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	99.24
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	99.2
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	99.08
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	98.94
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	98.91
2vnt_A	276	Urokinase-type plasminogen activator; UPA, inhibit	98.9
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	98.85
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	98.84
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	98.83
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	98.81
2qa9_E	185	Streptogrisin-B; chymotrypsin-type serine peptidas	98.78
1aut_C	250	Activated protein C; serine proteinase, plasma cal	98.77
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	98.75
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	98.74
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	98.74
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	98.74
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	98.72
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	98.71
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	98.71
1gpz_A	399	Complement C1R component; hydrolase, activation, i	98.71
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	98.7
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	98.7
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	98.7
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	98.69
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	98.69
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	98.68
1elv_A	333	Complement C1S component; trypsin-like serin prote	98.66
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	98.66
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	98.65
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	98.64
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	98.63
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	98.62
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	98.62
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	98.61
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	98.6
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	98.59
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	98.56
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	98.56
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	98.55
1md8_A	329	C1R complement serine protease; innate immunity, a	98.54
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	98.54
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	98.53
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	98.53
1arb_A	268	Achromobacter protease I; hydrolase(serine proteas	98.53
2xrc_A	565	Human complement factor I; immune system, hydrolas	98.52
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	98.51
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	98.51
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	98.5
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	98.49
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	98.46
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	98.45
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	98.45
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	98.45
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	98.44
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	98.44
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	98.43
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	98.43
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	98.42
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	98.42
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	98.42
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	98.41
4i8h_A	223	Cationic trypsin, beta-trypsin; serine protease, h	98.41
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	98.41
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	98.41
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	98.4
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	98.4
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	98.4
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	98.39
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	98.38
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	98.37
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	98.37
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	98.36
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	98.36
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	98.35
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	98.33
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	98.32
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	98.31
2aiq_A	231	Protein C activator; snake venom serine proteinase	98.27
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	98.27
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	98.24
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	98.23
3hrz_D	741	Complement factor B; serine protease, glycosilated	98.22
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	98.21
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	98.2
1a7s_A	225	Heparin binding protein; serine protease homolog,	98.18
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	98.18
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	98.18
2w7s_A	200	Serine protease SPLA; hydrolase, family S1; 1.80A	98.17
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	98.13
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	98.13
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	98.13
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	98.08
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	98.07
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	98.07
2vid_A	204	Serine protease SPLB; hydrolase; 1.80A {Staphyloco	98.03
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	98.01
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	98.01
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	97.99
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	97.98
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	97.92
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	97.88
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	97.85
2sga_A	181	Proteinase A; hydrolase (serine proteinase); 1.50A	97.84
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	97.82
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	97.82
2qa9_E	185	Streptogrisin-B; chymotrypsin-type serine peptidas	97.81
1arb_A	268	Achromobacter protease I; hydrolase(serine proteas	97.73
1agj_A	242	Epidermolytic toxin A; hydrolase, serine protease;	97.68
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	97.67
2w7s_A	200	Serine protease SPLA; hydrolase, family S1; 1.80A	97.57
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	97.55
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	97.46
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	97.45
2sga_A	181	Proteinase A; hydrolase (serine proteinase); 1.50A	97.26
2vid_A	204	Serine protease SPLB; hydrolase; 1.80A {Staphyloco	97.1
1agj_A	242	Epidermolytic toxin A; hydrolase, serine protease;	97.01
1hpg_A	187	Glutamic acid specific protease; serine protease,	96.81
2as9_A	210	Serine protease; trypsin-like fold, hydrolase; 1.7	96.79
2ea3_A	189	Chymotrypsin; celloulomonas, protease, hydrolase;	96.74
1hpg_A	187	Glutamic acid specific protease; serine protease,	96.66
2pfe_A	186	Protease A, alkaline serine protease, TFPA; beta-b	96.66
2ea3_A	189	Chymotrypsin; celloulomonas, protease, hydrolase;	96.58
2as9_A	210	Serine protease; trypsin-like fold, hydrolase; 1.7	96.35
1qtf_A	246	Exfoliative toxin B; serine protease, superantigen	96.31
2oua_A	188	Serine protease, protein NAPA; kinetic stability,	96.06
2pfe_A	186	Protease A, alkaline serine protease, TFPA; beta-b	96.04
1qtf_A	246	Exfoliative toxin B; serine protease, superantigen	95.21
3k6y_A	237	Serine protease, possible membrane-associated seri	94.1
3tjo_A	231	Serine protease HTRA1; peptidase, hydrolase; HET:	93.84
1l1j_A	239	Heat shock protease HTRA; hydrolase, serine protei	93.76
3lgi_A	237	Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydro	93.34
2oua_A	188	Serine protease, protein NAPA; kinetic stability,	93.09
2h5c_A	198	Alpha-lytic protease; serine protease, acylation t	92.83
3k6y_A	237	Serine protease, possible membrane-associated seri	92.8
1y8t_A	324	Hypothetical protein RV0983; serine protease, stru	92.53
1l1j_A	239	Heat shock protease HTRA; hydrolase, serine protei	91.81
3qo6_A	348	Protease DO-like 1, chloroplastic; protease, HTRA,	91.58
3qo6_A	348	Protease DO-like 1, chloroplastic; protease, HTRA,	91.05
3lgi_A	237	Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydro	91.01
3num_A	332	Serine protease HTRA1; DEGP, hydrolase; 2.75A {Hom	90.95
3tjo_A	231	Serine protease HTRA1; peptidase, hydrolase; HET:	90.73
1te0_A	318	Protease DEGS; two domains, serine protease, PDZ,	90.71
1lcy_A	325	HTRA2 serine protease; apoptosis, PDZ domain, casp	90.01
3sti_A	245	Protease DEGQ; serine protease, PDZ domain, chaper	89.66
1y8t_A	324	Hypothetical protein RV0983; serine protease, stru	88.92
1te0_A	318	Protease DEGS; two domains, serine protease, PDZ,	88.36
1wxr_A	1048	Haemoglobin protease; hemoglobine protease, autotr	88.01
1lcy_A	325	HTRA2 serine protease; apoptosis, PDZ domain, casp	87.63
3syj_A	1011	Adhesion and penetration protein autotransporter;	87.6
3sti_A	245	Protease DEGQ; serine protease, PDZ domain, chaper	85.91
3num_A	332	Serine protease HTRA1; DEGP, hydrolase; 2.75A {Hom	85.18
1wxr_A	1048	Haemoglobin protease; hemoglobine protease, autotr	83.2

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...

Probab=99.71  E-value=9.1e-18  Score=99.98  Aligned_cols=79  Identities=33%  Similarity=0.625  Sum_probs=61.9

Q ss_pred             eeeeccccccCC---cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHH
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRW   77 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~w   77 (117)
                      +.+.+...|...   .+....+|+. ..++++|+||+|+||++.. .++|+++||+||+..|..  .|++||++..|.+|
T Consensus        12 v~i~~~~~C~~~~~~~i~~~~iCa~-~~~~~~C~GDSGGPL~~~~-~~~~~l~GIvS~g~~c~~~~~p~vyt~V~~y~~W   89 (97)
T 1yph_E           12 LPLLSNTNCKKYWGTKIKDAMICAG-ASGVSSCMGDSGGPLVCKK-NGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNW   89 (97)
T ss_dssp             EEBCCHHHHHHHHGGGCCTTEEEEE-CSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCTTCCTTSEEEEEEHHHHHHH
T ss_pred             EEECCHHHhhHHhcCCCCCceEeec-CCCCCCCcCCCCCcEEEEe-CCeEEEEEEEEeCCCCCCCCCCeEEEEHHHhHHH
Confidence            556666667532   2344556776 3467899999999999874 678999999999977764  89999999999999


Q ss_pred             HHhhcc
Q psy7307          78 IYNTAK   83 (117)
Q Consensus        78 i~~~~~   83 (117)
                      |++.++
T Consensus        90 I~~~~~   95 (97)
T 1yph_E           90 VQQTLA   95 (97)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            998764

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=99.67  E-value=8.4e-17  Score=115.02  Aligned_cols=60  Identities=28%  Similarity=0.607  Sum_probs=53.2

Q ss_pred             CCCCCCcccCCCCCeeEEEc-CCCcEEEEEEeecCCCCCC-CCceeeecccchHHHHhhccC
Q psy7307          25 NRTSRQAQTGDSGGPLLLQR-PDKQWTIIGVVSWGIGCGK-TPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        25 ~~~~~~~C~~dsG~pl~~~~-~~~~~~~vgI~s~~~~C~~-~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      ..+++++|+|||||||++.. .+++|+++||+||+..|.. .|++||++..|.+||+++++.
T Consensus       285 ~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C~~~~pgVYTrVs~y~~WI~~~i~~  346 (347)
T 4f4o_C          285 SKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSCRTAEYGVYVRVTSILDWIQTTIAD  346 (347)
T ss_dssp             CTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCTTTSSCEEEEEHHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCCCCCCCeEEEEHHHHHHHHHHHHHc
Confidence            34678999999999999864 3689999999999988987 899999999999999998864

>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}

Probab=99.62  E-value=1.2e-15  Score=105.11  Aligned_cols=84  Identities=32%  Similarity=0.637  Sum_probs=64.6

Q ss_pred             eeeeccccccCCc-----ccccce-eecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAHQ-----LVRADY-DVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~~-----~~~~~~-~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~   74 (117)
                      +.+.+...|....     .....+ |....+.+++|+|||||||++.. +++|+++||+||+..|..  .|++||++..|
T Consensus       182 ~~i~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~-~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y  260 (276)
T 2vnt_A          182 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWGRGCALKDKPGVYTRVSHF  260 (276)
T ss_dssp             EEEECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBTTBCEEEEEGGGG
T ss_pred             eeEecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEee-CCeEEEEEEEEECCCCCCCCCCEEEEEHHHH
Confidence            4556667776532     111223 44445678999999999999874 679999999999988975  89999999999


Q ss_pred             hHHHHhhccCCCC
Q psy7307          75 LRWIYNTAKGDSG   87 (117)
Q Consensus        75 ~~wi~~~~~gdsg   87 (117)
                      .+||++.++.++|
T Consensus       261 ~~WI~~~~~~~nG  273 (276)
T 2vnt_A          261 LPWIRSHTKEENG  273 (276)
T ss_dssp             HHHHHHHHSCC--
T ss_pred             HHHHHHHhhhhcC
Confidence            9999999998776

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}

Probab=99.60  E-value=2e-15  Score=104.47  Aligned_cols=81  Identities=33%  Similarity=0.636  Sum_probs=65.4

Q ss_pred             eeeeccccccCCc------ccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAHQ------LVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~~------~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~   74 (117)
                      +.+.+...|....      +....+|+....++++|+|||||||++....++|+++||+||+..|..  .|++||++..|
T Consensus       189 ~~i~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y  268 (278)
T 2olg_A          189 VPVVHAEQCAKTFGAAGVRVRSSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKY  268 (278)
T ss_dssp             EEBCCGGGGGGGGSSTTCCCCTTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBCSTTCBCEEEEEGGGG
T ss_pred             ccccCHHHHHHHhccccccCCCceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCCCCCCCCCcEEeEHHHH
Confidence            5566777776422      344557877666789999999999998744578999999999978986  79999999999


Q ss_pred             hHHHHhhcc
Q psy7307          75 LRWIYNTAK   83 (117)
Q Consensus        75 ~~wi~~~~~   83 (117)
                      .+||++.++
T Consensus       269 ~~WI~~~i~  277 (278)
T 2olg_A          269 RDWIEGNIR  277 (278)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHHhhC
Confidence            999998764

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*

Probab=99.58  E-value=3.4e-15  Score=104.13  Aligned_cols=82  Identities=28%  Similarity=0.675  Sum_probs=64.5

Q ss_pred             eeeeccccccCC-----cccccceeecC-CCCCCcccCCCCCeeEEEcC-CCcEEEEEEeecCCCCCC--CCceeeeccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRP-DKQWTIIGVVSWGIGCGK--TPGVYVQVNK   73 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~-~~~~~~vgI~s~~~~C~~--~p~~~t~v~~   73 (117)
                      +.+.+...|...     .+....+|+.. .+.++.|+||+||||++... .++|+++||+||+..|..  .|++|+++..
T Consensus       160 v~i~~~~~C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~  239 (290)
T 1fiw_A          160 VDLIDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWS  239 (290)
T ss_dssp             EEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGG
T ss_pred             EEEecHHHhccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHH
Confidence            556666777642     23445577764 45679999999999999753 578999999999988975  8999999999


Q ss_pred             chHHHHhhccC
Q psy7307          74 YLRWIYNTAKG   84 (117)
Q Consensus        74 ~~~wi~~~~~g   84 (117)
                      |.+||++.++.
T Consensus       240 y~~WI~~~~~~  250 (290)
T 1fiw_A          240 YLNWIASKIGS  250 (290)
T ss_dssp             GHHHHHHHHCH
T ss_pred             hHHHHHHHhCc
Confidence            99999887753

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B

Probab=99.58  E-value=4.6e-15  Score=100.05  Aligned_cols=63  Identities=33%  Similarity=0.690  Sum_probs=53.1

Q ss_pred             ceeec-CCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          20 DYDVF-NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        20 ~~~~~-~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .+|+. ..+..++|+||+|+||++.. +++|+++||+||+..|..  .|++|+++..|.+||++.++
T Consensus       170 ~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~i~  235 (235)
T 4dgj_A          170 MICAGYEEGGIDSCQGDSGGPLMCQE-NNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQSFLH  235 (235)
T ss_dssp             EEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHTTCC
T ss_pred             eEeecCCCCCCccCCCCCCCeEEEEE-CCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHHHhC
Confidence            34553 34567899999999999874 678999999999988975  89999999999999998753

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2

Probab=99.57  E-value=5e-15  Score=100.60  Aligned_cols=82  Identities=30%  Similarity=0.565  Sum_probs=65.5

Q ss_pred             eeeeccccccCC-----cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC--CCceeeeccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK--TPGVYVQVNK   73 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~--~p~~~t~v~~   73 (117)
                      +.+.+...|...     .+....+|+...+..++|+||+|+||++...+++|+++||+||+.  .|..  .|++|+++..
T Consensus       150 ~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~  229 (241)
T 1bru_P          150 LLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSN  229 (241)
T ss_dssp             EEEECHHHHTSTTTTGGGCCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGG
T ss_pred             EEEecHHHhCcccccCCcCCCceEeecCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHH
Confidence            456666777653     234445787766678999999999999985568999999999985  6875  8999999999


Q ss_pred             chHHHHhhccC
Q psy7307          74 YLRWIYNTAKG   84 (117)
Q Consensus        74 ~~~wi~~~~~g   84 (117)
                      |.+||++.++.
T Consensus       230 ~~~WI~~~i~~  240 (241)
T 1bru_P          230 YIDWINSVIAN  240 (241)
T ss_dssp             SHHHHHHHHHH
T ss_pred             hHHHHHHHHhc
Confidence            99999988753

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A

Probab=99.57  E-value=3.4e-15  Score=101.72  Aligned_cols=81  Identities=28%  Similarity=0.691  Sum_probs=63.3

Q ss_pred             eeeeccccccCC-----cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~   74 (117)
                      +.+.+...|...     .+....+|+.. .+++++|+||+|+||++.. .++|+++||+||+..|..  .|++||++..|
T Consensus       158 ~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y  236 (247)
T 1ddj_A          158 LPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFE-KDKYILQGVTSWGLGCARPNKPGVYVRVSRF  236 (247)
T ss_dssp             EEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEEC-SSSEEEEEEECGGGCCBBTTBCEEEEEGGGS
T ss_pred             eeecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcCcEEEEE-CCcEEEEEEEEECCCCCCCCCCEEEEEhHHh
Confidence            455566667542     12344567764 3568999999999999874 578999999999978875  79999999999


Q ss_pred             hHHHHhhccC
Q psy7307          75 LRWIYNTAKG   84 (117)
Q Consensus        75 ~~wi~~~~~g   84 (117)
                      .+||++.++.
T Consensus       237 ~~WI~~~~~~  246 (247)
T 1ddj_A          237 VTWIEGVMRN  246 (247)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHhhc
Confidence            9999998764

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}

Probab=99.57  E-value=4.6e-15  Score=100.12  Aligned_cols=81  Identities=31%  Similarity=0.590  Sum_probs=63.8

Q ss_pred             eeeeccccccCC-----cccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~   74 (117)
                      +.+.+...|...     .+....+|+... +..++|+||+|+||++....++|+++||+||+..|..  .|++||++..|
T Consensus       143 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~  222 (232)
T 2oq5_A          143 VTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTAL  222 (232)
T ss_dssp             EEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGG
T ss_pred             EEEeCHHHcCCccccCCccCCCEEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHh
Confidence            456666777642     133445777654 4579999999999998755688999999999978975  79999999999


Q ss_pred             hHHHHhhcc
Q psy7307          75 LRWIYNTAK   83 (117)
Q Consensus        75 ~~wi~~~~~   83 (117)
                      .+||++.+.
T Consensus       223 ~~WI~~~~~  231 (232)
T 2oq5_A          223 RDWITSKTG  231 (232)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999998763

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A

Probab=99.57  E-value=4.2e-15  Score=99.70  Aligned_cols=81  Identities=27%  Similarity=0.553  Sum_probs=61.9

Q ss_pred             eeeeccccccCC----cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAH----QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~----~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|...    .+....+|+.. ....+.|+||+|+||++....++|+++||+||+..|..  .|++|+++..|.
T Consensus       135 ~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~  214 (224)
T 3beu_A          135 VPFVSDAACRSSSSFILVANEMICAGYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFA  214 (224)
T ss_dssp             EEEECHHHHHHHCSSCCCGGGEEEECCSSSSCBCCTTCTTCEEEEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHH
T ss_pred             CcccCHHHhhhhcCCccCCCCeEEeccCCCCCcCCCCcCCCeeEEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHH
Confidence            344455555431    12334456553 35679999999999998855689999999999978975  899999999999


Q ss_pred             HHHHhhcc
Q psy7307          76 RWIYNTAK   83 (117)
Q Consensus        76 ~wi~~~~~   83 (117)
                      +||++.++
T Consensus       215 ~WI~~~~~  222 (224)
T 3beu_A          215 SAIASAAR  222 (224)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            99998875

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*

Probab=99.57  E-value=6.3e-15  Score=99.65  Aligned_cols=64  Identities=36%  Similarity=0.603  Sum_probs=54.1

Q ss_pred             cceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhc
Q psy7307          19 ADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTA   82 (117)
Q Consensus        19 ~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~   82 (117)
                      ..+|+.. .+.++.|+||+|+||++...+++|+++||+||+..|..  .|++|+++..|.+||++.+
T Consensus       173 ~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~~~  239 (241)
T 3ncl_A          173 RMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENT  239 (241)
T ss_dssp             TEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHHH
T ss_pred             CeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence            3455543 45789999999999998756789999999999988876  8999999999999999875

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...

Probab=99.57  E-value=7.2e-15  Score=99.58  Aligned_cols=65  Identities=35%  Similarity=0.809  Sum_probs=54.4

Q ss_pred             ccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          18 RADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        18 ~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      ...+|+.. ..++++|+||+|+||++.. +++|+++||+||+..|..  .|++|+++..|.+||++.++
T Consensus       169 ~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~  236 (238)
T 3bg8_A          169 HKMICAGYREGGKDACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ  236 (238)
T ss_dssp             TTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred             CCeEeecCCCCCCCcCCCCCCcceEEEE-CCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence            33455543 3568999999999999874 578999999999988975  89999999999999998875

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*

Probab=99.57  E-value=5.1e-15  Score=100.63  Aligned_cols=63  Identities=40%  Similarity=0.802  Sum_probs=53.6

Q ss_pred             ceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccC
Q psy7307          20 DYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        20 ~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      .+|+. ..+++.|+||+|+||++.. +++|+++||+||+..|..  .|++|+++..|.+||++.++.
T Consensus       179 ~~Ca~-~~~~~~C~GDSGgPL~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~  243 (245)
T 2f9n_A          179 MLCAG-NSQRDSCQGDSGGPLVCKV-NGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVPK  243 (245)
T ss_dssp             EEEEC-CSSSBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHSCC
T ss_pred             cEeec-CCCCCcCCCCCCCceEEEE-CCEEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHhhc
Confidence            35554 2467899999999999874 688999999999988975  799999999999999998764

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*

Probab=99.57  E-value=6.5e-15  Score=105.96  Aligned_cols=86  Identities=30%  Similarity=0.673  Sum_probs=65.3

Q ss_pred             eeeeccccccCC-----cccccceeecC-CCCCCcccCCCCCeeEEEcC---CCcEEEEEEeecCCCCCC--CCceeeec
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRP---DKQWTIIGVVSWGIGCGK--TPGVYVQV   71 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~---~~~~~~vgI~s~~~~C~~--~p~~~t~v   71 (117)
                      +.+.+...|...     .+....+|+.. .+++++|+||||+||++...   .++|+++||+||+..|..  .|++||++
T Consensus       269 v~ii~~~~C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V  348 (372)
T 1z8g_A          269 VPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKV  348 (372)
T ss_dssp             EEEECHHHHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEG
T ss_pred             EEecChHHhCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEH
Confidence            445566666542     23334466654 35679999999999998743   378999999999988975  89999999


Q ss_pred             ccchHHHHhhccCCCCC
Q psy7307          72 NKYLRWIYNTAKGDSGG   88 (117)
Q Consensus        72 ~~~~~wi~~~~~gdsg~   88 (117)
                      ..|.+||++.++..+..
T Consensus       349 ~~y~~WI~~~i~~~~~~  365 (372)
T 1z8g_A          349 SDFREWIFQAIKTHSEA  365 (372)
T ss_dssp             GGGHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHhccCCC
Confidence            99999999998755543

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2

Probab=99.57  E-value=9.6e-15  Score=98.97  Aligned_cols=65  Identities=32%  Similarity=0.708  Sum_probs=54.2

Q ss_pred             ceeecCC-CCCCcccCCCCCeeEEEc-CCCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhccC
Q psy7307          20 DYDVFNR-TSRQAQTGDSGGPLLLQR-PDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        20 ~~~~~~~-~~~~~C~~dsG~pl~~~~-~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      .+|+... ..+++|+||+|+||++.. ..++|+++||+||+..|...|++|+++..|.+||++.++.
T Consensus       174 ~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~vyt~V~~y~~WI~~~~~~  240 (242)
T 2qy0_B          174 MFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEMEE  240 (242)
T ss_dssp             EEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSSSCEEEEEGGGGHHHHHHHTTC
T ss_pred             EEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCCCCcEEEEHHHHHHHHHHHhhc
Confidence            3455443 468999999999999863 4588999999999988987679999999999999998764

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B

Probab=99.57  E-value=8.1e-15  Score=99.49  Aligned_cols=63  Identities=35%  Similarity=0.693  Sum_probs=53.4

Q ss_pred             eeecC-CCCCCcccCCCCCeeEEEc-CCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          21 YDVFN-RTSRQAQTGDSGGPLLLQR-PDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        21 ~~~~~-~~~~~~C~~dsG~pl~~~~-~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      +|+.. .+.++.|+||+|+||++.. ..++|+++||+||+..|..  .|++|+++..|.+||++.++
T Consensus       182 ~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~  248 (251)
T 3gov_B          182 ICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRVTG  248 (251)
T ss_dssp             EEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHHHHHHHHC
T ss_pred             EEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHHHHhc
Confidence            45443 3568999999999999874 3589999999999988986  78999999999999998875

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...

Probab=99.57  E-value=5.7e-15  Score=102.80  Aligned_cols=57  Identities=37%  Similarity=0.897  Sum_probs=50.7

Q ss_pred             CCCcccCCCCCeeEEEcC-CCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccC
Q psy7307          28 SRQAQTGDSGGPLLLQRP-DKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~-~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      .+++|+||||+||++... .++|+++||+||+..|..  .|++||++..|.+||++.++.
T Consensus       227 ~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~  286 (289)
T 2bdy_A          227 RGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQ  286 (289)
T ss_dssp             CCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGGHHHHHHHHHC
T ss_pred             CCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHh
Confidence            678999999999999743 589999999999988975  899999999999999988753

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*

Probab=99.57  E-value=8.1e-15  Score=99.74  Aligned_cols=83  Identities=31%  Similarity=0.605  Sum_probs=62.5

Q ss_pred             eeeeccccccCC-----cccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~   74 (117)
                      +.+.+...|...     .+....+|+... ...+.|+||+|+||++.. +++|+++||+||+..|..  .|++|+++..|
T Consensus       152 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~  230 (248)
T 2r0l_A          152 VPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEK-NGVAYLYGIISWGDGCGRLHKPGVYTRVANY  230 (248)
T ss_dssp             EEBCCHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSTTTCTTCCEEEEEGGGG
T ss_pred             EeeeCHHHhCCccccCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEE-CCcEEEEEEEEeCCCCCCCCCCcEEEEHHHH
Confidence            445556666542     123344666543 467999999999999874 688999999999988975  89999999999


Q ss_pred             hHHHHhhccCCC
Q psy7307          75 LRWIYNTAKGDS   86 (117)
Q Consensus        75 ~~wi~~~~~gds   86 (117)
                      .+||++.++...
T Consensus       231 ~~WI~~~~~~~~  242 (248)
T 2r0l_A          231 VDWINDRIRPPR  242 (248)
T ss_dssp             HHHHHHHHC---
T ss_pred             HHHHHHHhcCCC
Confidence            999999987544

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}

Probab=99.56  E-value=5.3e-15  Score=100.02  Aligned_cols=82  Identities=34%  Similarity=0.645  Sum_probs=61.9

Q ss_pred             eeeeccccccCC----cccccceeecCCC-C--CCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC-CCceeeecccc
Q psy7307           3 LCLVLVLICAAH----QLVRADYDVFNRT-S--RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK-TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~----~~~~~~~~~~~~~-~--~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~-~p~~~t~v~~~   74 (117)
                      +.+.+...|...    .+....+|+.... .  ++.|+||+|+||++...+++|+++||+||+..|.. .|++|+++..|
T Consensus       148 ~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~~~~p~vyt~v~~~  227 (238)
T 1ym0_A          148 LNITTNAFCDAVYTSDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCASGYPGVYSRVGFH  227 (238)
T ss_dssp             EEECCHHHHHHHCTTSCCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSSSSSCEEEEEHHHH
T ss_pred             EEeeCHHHHhHhhcccccCCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCCCCCCcEEEEHHHh
Confidence            344455555431    1233445665432 3  78999999999999855689999999999988986 89999999999


Q ss_pred             hHHHHhhccC
Q psy7307          75 LRWIYNTAKG   84 (117)
Q Consensus        75 ~~wi~~~~~g   84 (117)
                      .+||++.++.
T Consensus       228 ~~WI~~~i~~  237 (238)
T 1ym0_A          228 AGWITDTITN  237 (238)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHhcC
Confidence            9999998764

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*

Probab=99.56  E-value=1.1e-14  Score=98.77  Aligned_cols=83  Identities=31%  Similarity=0.713  Sum_probs=63.8

Q ss_pred             eeeeccccccCCc----ccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAHQ----LVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~~----~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|....    +....+|+.. ....++|.||+|+||++.. +++|+++||+||+..|..  .|++|+++..|.
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~  228 (241)
T 2any_A          150 IPLVTNEECQKRYQDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKH-NGMWRLVGITSWGEGCARREQPGVYTKVAEYM  228 (241)
T ss_dssp             EEEECHHHHHTTSCTTCSCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGH
T ss_pred             eEEeCHHHhhhHhccCCCCcCcEeecCCCCCCccCCCCCCCcEEEEE-CCEEEEEEEEEecCCCCCCCCCeEEEEHHHhH
Confidence            4455666665422    3344466654 3568999999999999874 578999999999988875  799999999999


Q ss_pred             HHHHhhccCCC
Q psy7307          76 RWIYNTAKGDS   86 (117)
Q Consensus        76 ~wi~~~~~gds   86 (117)
                      +||++.++...
T Consensus       229 ~WI~~~~~~~~  239 (241)
T 2any_A          229 DWILEKTQSSD  239 (241)
T ss_dssp             HHHHHHHSCC-
T ss_pred             HHHHHHhhccc
Confidence            99999887543

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A

Probab=99.56  E-value=3.1e-14  Score=96.57  Aligned_cols=84  Identities=27%  Similarity=0.499  Sum_probs=66.6

Q ss_pred             eeeeccccccCCc-----ccccceeecCCC-CCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAHQ-----LVRADYDVFNRT-SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~~-----~~~~~~~~~~~~-~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~   74 (117)
                      +.+.+...|....     +....+|+.... +.++|+||+|+||++.. .++|+++||+||+..|..  .|++|+++..|
T Consensus       140 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y  218 (240)
T 1si5_H          140 LYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQ-HKMRMVLGVIVPGRGCAIPNRPGIFVRVAYY  218 (240)
T ss_dssp             EEEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTTCEEEEEC-SSSEEEEEEECSCSCSSCTTCCEEEEEGGGG
T ss_pred             EeecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCCCcEEEEE-CCcEEEEEEEEECCCCCCCCCCcEEEEHHHH
Confidence            5566777776532     344557776543 68999999999999984 688999999999988975  89999999999


Q ss_pred             hHHHHhhccCCCC
Q psy7307          75 LRWIYNTAKGDSG   87 (117)
Q Consensus        75 ~~wi~~~~~gdsg   87 (117)
                      .+||++.++....
T Consensus       219 ~~WI~~~i~~~~~  231 (240)
T 1si5_H          219 AKWIHKIILTYKV  231 (240)
T ss_dssp             HHHHHHHHSSCCC
T ss_pred             HHHHHHHHhccCc
Confidence            9999999875443

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...

Probab=99.56  E-value=7.6e-15  Score=99.50  Aligned_cols=80  Identities=33%  Similarity=0.632  Sum_probs=62.2

Q ss_pred             eeeeccccccCC-----cccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~   74 (117)
                      +.+.+...|...     .+....+|+... ...++|+||+|+||++.. +++|+++||+||+..|..  .|++|+++..|
T Consensus       159 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~-~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~  237 (247)
T 3mhw_U          159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWGRGCALKDKPGVYTRVSHF  237 (247)
T ss_dssp             EEEECHHHHTSTTTTGGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBTTBCEEEEEGGGC
T ss_pred             EEEEChHHhcCccccCCcCCCCeEecCCCCCCCccCCCCCCCeEEEEE-CCCEEEEEEEEECCCCCCCCCCeEEEEHHHH
Confidence            445555666542     233344666554 467999999999999874 578999999999988975  89999999999


Q ss_pred             hHHHHhhcc
Q psy7307          75 LRWIYNTAK   83 (117)
Q Consensus        75 ~~wi~~~~~   83 (117)
                      .+||++.++
T Consensus       238 ~~WI~~~~~  246 (247)
T 3mhw_U          238 LPWIRSHTK  246 (247)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHhc
Confidence            999998875

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*

Probab=99.55  E-value=1e-14  Score=98.47  Aligned_cols=80  Identities=28%  Similarity=0.554  Sum_probs=60.9

Q ss_pred             eeeeccccccCC---cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchH
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLR   76 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~   76 (117)
                      +.+.+...|...   .+....+|+.. ...++.|+||+|+||++.. +++|+++||+||+..|..  .|++|+++..|.+
T Consensus       148 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~  226 (235)
T 2wph_S          148 VPLVDRATCLRSTKFTITNNMFCAGFHEGGRDSCQGDSGGPHVTEV-EGTSFLTGIISWGEECAMKGKYGIYTKVSRYVN  226 (235)
T ss_dssp             EEEECHHHHHHTCSSCCCTTEEEESCTTCSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHH
T ss_pred             eeeeCHHHhcCcccCCCCCCEEEeCCCCCCCccCCCCCCCceEEeE-CCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHH
Confidence            344555555431   13334456643 3567999999999999873 578999999999988975  7999999999999


Q ss_pred             HHHhhcc
Q psy7307          77 WIYNTAK   83 (117)
Q Consensus        77 wi~~~~~   83 (117)
                      ||++.++
T Consensus       227 WI~~~~~  233 (235)
T 2wph_S          227 WIKEKTK  233 (235)
T ss_dssp             HHHHHCC
T ss_pred             HHHHHHh
Confidence            9998875

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...

Probab=99.55  E-value=1.3e-14  Score=99.10  Aligned_cols=67  Identities=31%  Similarity=0.708  Sum_probs=55.7

Q ss_pred             ceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccCCCC
Q psy7307          20 DYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKGDSG   87 (117)
Q Consensus        20 ~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~gdsg   87 (117)
                      .+|+.. .+.+++|+||+|+||++.. +++|+++||+||+..|..  .|++|+++..|.+||++.++....
T Consensus       175 ~~Ca~~~~~~~~~C~GDSGgPl~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~~~~  244 (254)
T 2bz6_H          175 MFCAGYSDGSKDSCKGDSGGPHATHY-RGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSEPR  244 (254)
T ss_dssp             EEEESCSSSSCBCCGGGTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHTSCCC
T ss_pred             EEeecCCCCCCccccccCCCceEEeE-CCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHHhccCC
Confidence            345443 3457899999999999873 578999999999988975  789999999999999999976554

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}

Probab=99.55  E-value=1.2e-14  Score=98.40  Aligned_cols=81  Identities=21%  Similarity=0.420  Sum_probs=60.5

Q ss_pred             eeeeccccccCC---cccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchH
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLR   76 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~   76 (117)
                      +.+.+...|...   .+....+|+... ++.++|+||+|+||++.. .++|+++||+||+..|..  .|++|+++..|.+
T Consensus       141 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~  219 (234)
T 2asu_B          141 LNVISNQECNIKHRGRVRESEMCTEGLLAPVGACEGDYGGPLACFT-HNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVD  219 (234)
T ss_dssp             EEEECHHHHHHHTTTCCCTTEEEECCCSSCCBCCTTCTTCEEEEEE-TTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHH
T ss_pred             eeEEcHHHcccccCCccCcceEeecCCCCCCeeccCCCCCceEEEE-CCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHH
Confidence            344455555431   233344565543 468999999999999874 578999999999988975  8999999999999


Q ss_pred             HHHhhccC
Q psy7307          77 WIYNTAKG   84 (117)
Q Consensus        77 wi~~~~~g   84 (117)
                      ||++.++.
T Consensus       220 WI~~~~~~  227 (234)
T 2asu_B          220 WIHKVMRL  227 (234)
T ss_dssp             HHHHHC--
T ss_pred             HHHHHhhc
Confidence            99998764

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=99.55  E-value=9.9e-15  Score=103.51  Aligned_cols=64  Identities=33%  Similarity=0.723  Sum_probs=53.2

Q ss_pred             ceeecCC-CCCCcccCCCCCeeEEEc-CCCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhcc
Q psy7307          20 DYDVFNR-TSRQAQTGDSGGPLLLQR-PDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        20 ~~~~~~~-~~~~~C~~dsG~pl~~~~-~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .+|+... .++++|+|||||||++.. ..++|+++||+||+..|...|++||++..|.+||++.++
T Consensus       263 ~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~~~~gvyT~V~~y~~WI~~~i~  328 (329)
T 1md8_A          263 MFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEME  328 (329)
T ss_dssp             EEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSSSSCEEEEEGGGTHHHHHHHHH
T ss_pred             eEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcCCCCcEEEEHHHHHHHHHHHHh
Confidence            3454433 468999999999999853 358999999999998898767999999999999998764

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...

Probab=99.55  E-value=1.2e-14  Score=98.56  Aligned_cols=66  Identities=32%  Similarity=0.679  Sum_probs=53.9

Q ss_pred             cceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccCC
Q psy7307          19 ADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKGD   85 (117)
Q Consensus        19 ~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~gd   85 (117)
                      ..+|+.. ...++.|+||+|+||++.. +++|+++||+||+..|..  .|++|+++..|.+||++.++..
T Consensus       167 ~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~~  235 (241)
T 2jkh_A          167 NMFCAGYDTKQEDACQGDSGGPHVTRF-KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTR  235 (241)
T ss_dssp             TEEEESCSSSSCBCCTTTTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHTC--
T ss_pred             CeEEeeCCCCCCccCcCcCCCeeEEEE-CCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHhccc
Confidence            3455543 3467899999999999873 578999999999988975  7899999999999999998754

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*

Probab=99.55  E-value=1e-14  Score=99.57  Aligned_cols=80  Identities=33%  Similarity=0.623  Sum_probs=60.3

Q ss_pred             eeeccccccCC---cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHH
Q psy7307           4 CLVLVLICAAH---QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRW   77 (117)
Q Consensus         4 ~~~~~~~C~~~---~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~w   77 (117)
                      .+.+...|...   .+....+|+.. ...+++|+||+|+||++.. +++|+++||+||+..|..  .|++||++..|.+|
T Consensus       155 ~i~~~~~C~~~~~~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~-~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~W  233 (250)
T 1aut_C          155 PVVPHNECSEVMSNMVSENMLCAGILGDRQDACEGDSGGPMVASF-HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDW  233 (250)
T ss_dssp             EEECHHHHHHHCSSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHH
T ss_pred             EEecHHHhhHHhccCCCCCEEEeCCCCCCCCCCCCCCchheEEEE-CCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHH
Confidence            34445555431   12334456543 3467999999999999863 578999999999988975  89999999999999


Q ss_pred             HHhhccC
Q psy7307          78 IYNTAKG   84 (117)
Q Consensus        78 i~~~~~g   84 (117)
                      |++.++.
T Consensus       234 I~~~~~~  240 (250)
T 1aut_C          234 IHGHIRD  240 (250)
T ss_dssp             HHHHHC-
T ss_pred             HHHHhhc
Confidence            9998863

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A

Probab=99.55  E-value=1.4e-14  Score=100.54  Aligned_cols=82  Identities=32%  Similarity=0.613  Sum_probs=62.3

Q ss_pred             eeeeccccccCC-----cccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~   74 (117)
                      +.+.+...|...     .+....+|+... ...+.|+||+|+||++.. +++|+++||+||+..|..  .|++|+++..|
T Consensus       187 v~i~~~~~C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~-~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y  265 (283)
T 1yc0_A          187 VPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEK-NGVAYLYGIISWGDGCGRLHKPGVYTRVANY  265 (283)
T ss_dssp             EEBCCHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSTTTCTTCCEEEEEGGGG
T ss_pred             EEEECHHHhcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEE-CCcEEEEEEEEECCCCCCCCCCeEEEEhhhH
Confidence            445555666542     123344666543 467899999999999874 688999999999988975  89999999999


Q ss_pred             hHHHHhhccCC
Q psy7307          75 LRWIYNTAKGD   85 (117)
Q Consensus        75 ~~wi~~~~~gd   85 (117)
                      .+||++.++..
T Consensus       266 ~~WI~~~i~~~  276 (283)
T 1yc0_A          266 VDWINDRIRPP  276 (283)
T ss_dssp             HHHHHHHCC--
T ss_pred             HHHHHHHhcCC
Confidence            99999998754

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*

Probab=99.54  E-value=1e-14  Score=99.71  Aligned_cols=67  Identities=34%  Similarity=0.655  Sum_probs=55.8

Q ss_pred             eeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccCCCCC
Q psy7307          21 YDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKGDSGG   88 (117)
Q Consensus        21 ~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~gdsg~   88 (117)
                      +|+.. ....+.|.||+|+||++.. +++|+++||+||+..|..  .|++|+++..|.+||++.++.....
T Consensus       178 ~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~lvGI~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~~~~~~  247 (261)
T 3gyl_B          178 VCAGYVEGGKDACQGDSGGPLSCPV-EGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQSKVTELQPR  247 (261)
T ss_dssp             EEESCSSSSCBCCTTTTTCEEEEEE-TTEEEEEEEECCCCCSSCTTCCEEEEEGGGGHHHHHHHHHHHSCC
T ss_pred             EeeCCCCCCCccCCCCCCCeeEEEe-CCEEEEEEEEecCCCCCCCCCCCEEEEHHHhHHHHHHHHhhccCc
Confidence            44432 4568899999999999874 688999999999988975  7999999999999999988754444

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B

Probab=99.54  E-value=8e-15  Score=93.50  Aligned_cols=77  Identities=31%  Similarity=0.605  Sum_probs=58.4

Q ss_pred             eeeeccccccCC---cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|...   .+....+|+.. ..++++|+||+|+||++.   +  .++||+||+ ..|..  .|++|+++..|.
T Consensus        67 ~~i~~~~~C~~~~~~~~~~~~iCa~~~~~~~~~C~GDsGgPL~~~---g--~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~  141 (152)
T 2pka_B           67 LTLLQNTFCADAHPDKVTESMLCAGYLPGGKDTCMGDSGGPLICN---G--MWQGITSWGHTPCGSANKPSIYTKLIFYL  141 (152)
T ss_dssp             EEEECHHHHHHHCSSBCCTTEEEEECTTSSCBCCTTCTTCEEEET---T--EEEEEECCCCSSTTCTTCCEEEEEGGGGH
T ss_pred             eEEcCHHHhhhhhcCCCCCCEEeeccCCCCCcccCCccccceEEC---C--EEEEEEecCCCCCCCCCCCeEEEEHHHHH
Confidence            445555566431   23344566654 356899999999999986   4  399999999 68975  899999999999


Q ss_pred             HHHHhhccC
Q psy7307          76 RWIYNTAKG   84 (117)
Q Consensus        76 ~wi~~~~~g   84 (117)
                      +||++.++.
T Consensus       142 ~WI~~~~~~  150 (152)
T 2pka_B          142 DWIDDTITE  150 (152)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhcc
Confidence            999988754

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...

Probab=99.54  E-value=1.2e-14  Score=99.01  Aligned_cols=80  Identities=33%  Similarity=0.619  Sum_probs=61.7

Q ss_pred             eeeeccccccCC---cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHH
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRW   77 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~w   77 (117)
                      +.+.+...|...   .+....+|+. ..+++.|+||+|+||++.. +++|+++||+||+..|..  .|++|+++..|.+|
T Consensus       160 ~~~~~~~~C~~~~~~~~~~~~~Ca~-~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~W  237 (245)
T 1t8o_A          160 LPLLSNTNCKKYWGTKIKDAMICAG-ASGVSSCMGDSGGPLVCKK-NGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNW  237 (245)
T ss_dssp             EEEECHHHHHHHHGGGCCTTEEEEE-CSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCTTCCTTSEEEEEEGGGTHHH
T ss_pred             EeeEcchhhhHhhcCcCCCceEEcc-CCCCccCcccCcCCEEEEE-CCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHH
Confidence            445555556431   2334446665 4567899999999999874 689999999999977875  79999999999999


Q ss_pred             HHhhccC
Q psy7307          78 IYNTAKG   84 (117)
Q Consensus        78 i~~~~~g   84 (117)
                      |++.++.
T Consensus       238 I~~~~~~  244 (245)
T 1t8o_A          238 VQQTLAA  244 (245)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHcc
Confidence            9988753

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*

Probab=99.54  E-value=1.6e-14  Score=97.54  Aligned_cols=64  Identities=34%  Similarity=0.710  Sum_probs=52.9

Q ss_pred             ceeecC-CCCCCcccCCCCCeeEEEc-CCCcEEEEEEeecC-CCCCC--CCceeeecccchHHHHhhcc
Q psy7307          20 DYDVFN-RTSRQAQTGDSGGPLLLQR-PDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        20 ~~~~~~-~~~~~~C~~dsG~pl~~~~-~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .+|+.. .+..+.|+||+|+||++.. ..++|+++||+||+ ..|..  .|++|+++..|.+||++.++
T Consensus       172 ~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~  240 (242)
T 3tvj_B          172 MLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS  240 (242)
T ss_dssp             EEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             eEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence            344432 3568999999999999864 35899999999998 68976  78999999999999998764

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2

Probab=99.53  E-value=1.2e-14  Score=98.44  Aligned_cols=63  Identities=35%  Similarity=0.646  Sum_probs=52.9

Q ss_pred             cceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhc
Q psy7307          19 ADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTA   82 (117)
Q Consensus        19 ~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~   82 (117)
                      ..+|+.. ..++++|+||+|+||++. ..++|+++||+||+..|..  .|++||++..|.+||++.+
T Consensus       171 ~~~Ca~~~~~~~~~C~GDSGgPL~~~-~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~  236 (237)
T 2f91_A          171 SMICAGVPEGGKDSCQGDSGGPLAAS-DTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKANA  236 (237)
T ss_dssp             TEEEECCTTCCCBCCTTCTTCEEEEC-TTSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHHHC
T ss_pred             CeEEEecCCCCCCCCCCcCCCCeEEe-cCCCEEEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHHhc
Confidence            3455543 357899999999999987 3678999999999978986  7999999999999998864

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}

Probab=99.53  E-value=1.8e-14  Score=105.25  Aligned_cols=56  Identities=38%  Similarity=0.919  Sum_probs=50.1

Q ss_pred             CCCcccCCCCCeeEEEcC-CCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          28 SRQAQTGDSGGPLLLQRP-DKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~-~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      ..++|+|||||||++... +++|+++||+||+..|..  .|++||++..|.+||++.++
T Consensus       362 ~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~pgVyT~Vs~y~~WI~~~i~  420 (424)
T 3nxp_A          362 RGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID  420 (424)
T ss_dssp             CCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTCCSCEEEEECTTCHHHHHHHHH
T ss_pred             CCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHH
Confidence            468999999999999753 589999999999988986  89999999999999998775

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*

Probab=99.52  E-value=5e-14  Score=95.94  Aligned_cols=80  Identities=36%  Similarity=0.769  Sum_probs=62.7

Q ss_pred             eeeeccccccCCc-----ccccceeecCCCC-------CCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCcee
Q psy7307           3 LCLVLVLICAAHQ-----LVRADYDVFNRTS-------RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVY   68 (117)
Q Consensus         3 ~~~~~~~~C~~~~-----~~~~~~~~~~~~~-------~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~   68 (117)
                      +.+.+...|....     +....+|+.....       +++|+||+|+||++.. +++|+++||+||+..|..  .|++|
T Consensus       158 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~-~~~~~l~Gi~S~g~~C~~~~~p~vy  236 (252)
T 1rtf_B          158 VRLYPSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLN-DGRMTLVGIISWGLGCGQKDVPGVY  236 (252)
T ss_dssp             EEECCGGGSSTTTTTTCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEE
T ss_pred             eEEecHHHhhhhhccCCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEe-CCcEEEEEEEEEcCCCCCCCCCeEE
Confidence            4566677776532     3344567765432       7899999999999874 588999999999988975  79999


Q ss_pred             eecccchHHHHhhcc
Q psy7307          69 VQVNKYLRWIYNTAK   83 (117)
Q Consensus        69 t~v~~~~~wi~~~~~   83 (117)
                      +++..|.+||++.++
T Consensus       237 t~V~~y~~WI~~~~~  251 (252)
T 1rtf_B          237 TKVTNYLDWIRDNMR  251 (252)
T ss_dssp             EEGGGGHHHHHHHCC
T ss_pred             EEHHHHHHHHHHhcC
Confidence            999999999998875

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=99.52  E-value=1.2e-14  Score=105.12  Aligned_cols=65  Identities=34%  Similarity=0.751  Sum_probs=53.7

Q ss_pred             ceeecCC-CCCCcccCCCCCeeEEEcC-CCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhccC
Q psy7307          20 DYDVFNR-TSRQAQTGDSGGPLLLQRP-DKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        20 ~~~~~~~-~~~~~C~~dsG~pl~~~~~-~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      .+|+... +++++|+|||||||++... .++|+++||+||+..|...|++||++..|.+||++.++.
T Consensus       331 ~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~~~~vyt~V~~y~~WI~~~~~~  397 (399)
T 1gpz_A          331 MFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEMEE  397 (399)
T ss_dssp             EEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTTTTEEEEEEGGGGHHHHHHHTC-
T ss_pred             eEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcCCCCeEEEEhHHhHHHHHHHhcc
Confidence            4555433 4679999999999998643 578999999999988987679999999999999998864

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...

Probab=99.52  E-value=2.1e-14  Score=97.38  Aligned_cols=80  Identities=31%  Similarity=0.512  Sum_probs=63.3

Q ss_pred             eeeeccccccCC-----cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC--CCceeeeccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK--TPGVYVQVNK   73 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~--~p~~~t~v~~   73 (117)
                      +.+.+...|...     .+....+|+.....++.|+||+|+||++.. +++|+++||+||+.  .|..  .|++||++..
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~-~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~  228 (240)
T 1gvk_B          150 LPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSA  228 (240)
T ss_dssp             CCEECHHHHTSTTTTGGGCCTTEEEECCSSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECBTTBSSCTTCCEEEEEGGG
T ss_pred             EEEEcHHHhccccccCccCCcceEeecCCCCCcccCCCCcCceEEEE-CCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHH
Confidence            445566667642     233445777766678999999999999874 58899999999984  6875  8999999999


Q ss_pred             chHHHHhhcc
Q psy7307          74 YLRWIYNTAK   83 (117)
Q Consensus        74 ~~~wi~~~~~   83 (117)
                      |.+||++.++
T Consensus       229 ~~~WI~~~i~  238 (240)
T 1gvk_B          229 YISWINNVIA  238 (240)
T ss_dssp             SHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999998775

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2

Probab=99.52  E-value=5.5e-14  Score=95.94  Aligned_cols=80  Identities=31%  Similarity=0.557  Sum_probs=63.7

Q ss_pred             eeeeccccccCC-----cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC--CCceeeeccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK--TPGVYVQVNK   73 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~--~p~~~t~v~~   73 (117)
                      +.+.+...|...     .+....+|+...+..++|+||+|+||++.. +++|+++||+||+.  .|..  .|++||++..
T Consensus       162 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~  240 (251)
T 1pyt_D          162 QPVVDYATCSQRDWWGTTVKETMVCAGGDGVISACNGDSGGPLNCQA-DGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSA  240 (251)
T ss_dssp             EECBCHHHHTSTTTTTTTCCTTEEEECCSCSSCCCCSCTTCEEEEES-SSSEEEEEEEEECCSSCTTBTTBCEEEEEGGG
T ss_pred             eEeeCHHHcchhhccCCCcCCCeEEecCCCCCccCCCCCCCceEEEE-CCCEEEEEEEEECCCCCCCCCCCCeEEEEHHH
Confidence            455666677642     234455787766678999999999999974 68899999999985  6875  7999999999


Q ss_pred             chHHHHhhcc
Q psy7307          74 YLRWIYNTAK   83 (117)
Q Consensus        74 ~~~wi~~~~~   83 (117)
                      |.+||++.++
T Consensus       241 ~~~WI~~~~~  250 (251)
T 1pyt_D          241 YIDWINQKLQ  250 (251)
T ss_dssp             GHHHHHHHTT
T ss_pred             HHHHHHHHhc
Confidence            9999998764

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}

Probab=99.51  E-value=1.3e-14  Score=105.17  Aligned_cols=67  Identities=33%  Similarity=0.747  Sum_probs=55.5

Q ss_pred             cceeecCCCCCCcccCCCCCeeEEEcC--CCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccCC
Q psy7307          19 ADYDVFNRTSRQAQTGDSGGPLLLQRP--DKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKGD   85 (117)
Q Consensus        19 ~~~~~~~~~~~~~C~~dsG~pl~~~~~--~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~gd   85 (117)
                      ..+|+....++++|+||+||||++...  .++|+++||+||+..|..  .|++||++..|.+||++.++..
T Consensus       315 ~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~~~PgVYT~V~~y~~WI~~~i~~~  385 (394)
T 2b9l_A          315 TFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHFRNWIDQEMQAK  385 (394)
T ss_dssp             TEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBSSSCEEEEEGGGGHHHHHHHHHHT
T ss_pred             CEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHHhc
Confidence            345555556789999999999998632  368999999999988975  8999999999999999988643

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...

Probab=99.51  E-value=4.1e-14  Score=96.41  Aligned_cols=56  Identities=38%  Similarity=0.919  Sum_probs=50.0

Q ss_pred             CCCcccCCCCCeeEEEcC-CCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          28 SRQAQTGDSGGPLLLQRP-DKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~-~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      ..+.|+||+|+||++... .++|+++||+||+..|..  .|++||++..|.+||++.++
T Consensus       197 ~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i~  255 (259)
T 3rm2_H          197 RGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID  255 (259)
T ss_dssp             CCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGGHHHHHHHHH
T ss_pred             CCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHH
Confidence            468999999999999753 689999999999988976  88999999999999998875

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C

Probab=99.51  E-value=3e-14  Score=96.53  Aligned_cols=80  Identities=31%  Similarity=0.537  Sum_probs=62.6

Q ss_pred             eeeeccccccCC-----cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC--CCceeeeccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK--TPGVYVQVNK   73 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~--~p~~~t~v~~   73 (117)
                      +.+.+...|...     .+....+|+...+ ++.|+||+|+||++...+++|+++||+||+.  .|..  .|++|+++..
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~-~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~  228 (240)
T 1fon_A          150 LPTVDYEHCSQWDWWGITVKKTMVCAGGDT-RSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSA  228 (240)
T ss_dssp             CCEECHHHHTSTTTTGGGCCTTEEEECCSS-SCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGG
T ss_pred             EeeeCHHHhccceecCCccccceEeecCCC-CcccCCCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHH
Confidence            445566667642     2334456776544 8899999999999975468899999999985  7875  8999999999


Q ss_pred             chHHHHhhcc
Q psy7307          74 YLRWIYNTAK   83 (117)
Q Consensus        74 ~~~wi~~~~~   83 (117)
                      |.+||++.++
T Consensus       229 ~~~WI~~~~~  238 (240)
T 1fon_A          229 FIDWIDETIA  238 (240)
T ss_dssp             SHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999998875

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=99.51  E-value=3.1e-14  Score=103.15  Aligned_cols=64  Identities=34%  Similarity=0.710  Sum_probs=52.0

Q ss_pred             ceeecC-CCCCCcccCCCCCeeEEEc-CCCcEEEEEEeecC-CCCCC--CCceeeecccchHHHHhhcc
Q psy7307          20 DYDVFN-RTSRQAQTGDSGGPLLLQR-PDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        20 ~~~~~~-~~~~~~C~~dsG~pl~~~~-~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .+|+.. .+++++|+|||||||++.. ..++|+++||+||+ ..|..  .|++||++..|.+||++.++
T Consensus       333 ~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~  401 (403)
T 1zjk_A          333 MLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS  401 (403)
T ss_dssp             EEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHHHT
T ss_pred             eEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence            345543 3478999999999999864 35789999999998 68985  78999999999999999875

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=99.49  E-value=5.4e-14  Score=99.64  Aligned_cols=67  Identities=36%  Similarity=0.697  Sum_probs=55.3

Q ss_pred             cceeecCCCCCCcccCCCCCeeEEEcC-CC-cEEEEEEeecCCCCCCCCceeeecccchHHHHhhccCCC
Q psy7307          19 ADYDVFNRTSRQAQTGDSGGPLLLQRP-DK-QWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDS   86 (117)
Q Consensus        19 ~~~~~~~~~~~~~C~~dsG~pl~~~~~-~~-~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~gds   86 (117)
                      ..+|+....++++|+|||||||++... .+ +|+++||+||+..|.. |++||++..|.+||++.++..+
T Consensus       260 ~~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C~~-~~vyt~V~~y~~WI~~~~~~~~  328 (333)
T 1elv_A          260 NMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT-YGLYTRVKNYVDWIMKTMQENS  328 (333)
T ss_dssp             TEEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTTS-EEEEEEGGGGHHHHHHHHHHTC
T ss_pred             CeECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCCCCC-CcEEeEHHHHHHHHHHHHhccC
Confidence            345665455789999999999998743 24 8999999999988985 8999999999999999887543

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A

Probab=99.47  E-value=5.6e-14  Score=95.44  Aligned_cols=80  Identities=26%  Similarity=0.441  Sum_probs=61.5

Q ss_pred             eeeeccccccCC-----cccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeeccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNK   73 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~   73 (117)
                      +.+.+...|...     .+....+|+... ...++|+||+|+||++.   +.|+++||+||+ ..|..  .|++||++..
T Consensus       143 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~  219 (240)
T 2zgc_A          143 LQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVCG---KGRVLAGVLSFSSRVCTDIFKPPVATAVAP  219 (240)
T ss_dssp             EEECCHHHHTSTTTTTTCCCTTEEEEECSSTTCBCCTTCTTCEEEET---TTTEEEEEECCCCSSTTCTTSCCEEEESGG
T ss_pred             eeecCHHHhCCccccCCCCCCceEeeccCCCCCccCCCCccCeeEEC---CCCEEEEEEEECCCCCCCCCCCcEEEEHHH
Confidence            455666677651     133345676654 46789999999999986   347899999998 57976  7999999999


Q ss_pred             chHHHHhhccCC
Q psy7307          74 YLRWIYNTAKGD   85 (117)
Q Consensus        74 ~~~wi~~~~~gd   85 (117)
                      |.+||++.++.+
T Consensus       220 y~~WI~~~~~~~  231 (240)
T 2zgc_A          220 YVSWIRKVTGRS  231 (240)
T ss_dssp             GHHHHHHHHCCC
T ss_pred             hHHHHHHHHhhc
Confidence            999999988644

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2

Probab=99.46  E-value=1.5e-13  Score=93.02  Aligned_cols=63  Identities=37%  Similarity=0.643  Sum_probs=51.4

Q ss_pred             ccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeec----CCCCCC--CCceeeecccchHHHHhhc
Q psy7307          18 RADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSW----GIGCGK--TPGVYVQVNKYLRWIYNTA   82 (117)
Q Consensus        18 ~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~----~~~C~~--~p~~~t~v~~~~~wi~~~~   82 (117)
                      ...+|+.. .+..+.|+||+|+||++..  ++|.++||+||    +..|..  .|++|+++..|.+||++.+
T Consensus       172 ~~~~Ca~~~~~~~~~C~GDSGgPL~~~~--~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~~~  241 (241)
T 1m9u_A          172 DNHICVQDPAGNTGACNGDSGGPLNCPD--GGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGDNS  241 (241)
T ss_dssp             TTEEEECCTTSCCBCCTTCTTCEEEEES--SSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHHHC
T ss_pred             CCcEEECcCCCCCeeecCcCCccEEEeC--CCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhhhC
Confidence            33455554 4567999999999999984  78999999999    446875  8999999999999998753

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=99.46  E-value=1e-13  Score=105.61  Aligned_cols=63  Identities=37%  Similarity=0.833  Sum_probs=44.4

Q ss_pred             ceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          20 DYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        20 ~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .+|+.. .+++++|+||+||||++.. +++|+++||+||+..|..  .|++||++..|.+||++.++
T Consensus       558 ~iCag~~~~~~d~C~GDSGGPLv~~~-~~~~~lvGIvS~G~~C~~~~~P~vyT~V~~y~~WI~~~~~  623 (625)
T 2f83_A          558 MICAGYREGGKDACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ  623 (625)
T ss_dssp             BCCC----------CCCTTCEEEEEE-TTEEEEEEEEEECCC----CCCCEEEEGGGGHHHHHHTC-
T ss_pred             eEEeecCCCCCcCCCCCcccceEEEE-CCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence            344432 3568999999999999874 578999999999988975  89999999999999998775

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}

Probab=99.45  E-value=9.5e-14  Score=93.89  Aligned_cols=78  Identities=32%  Similarity=0.600  Sum_probs=58.5

Q ss_pred             eeeeccccccCC---cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|...   .+....+|+.. ..++++|+||+|+||+++   +  +++||+||+ ..|..  .|++||++..|.
T Consensus       153 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~  227 (238)
T 1spj_A          153 LKILPNDECKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMCD---G--VLQGVTSWGYVPCGTPNKPSVAVRVLSYV  227 (238)
T ss_dssp             EEEECHHHHHHHCSSCCCTTEEEEECTTCSSBCCTTCTTCEEEET---T--EEEEEEEECCSSTTCTTCCEEEEEGGGGH
T ss_pred             EeecCHHHhhhhccCCCCCCeEEeeCCCCCCCCCCCCCCCcEEEc---C--EEEEEEEeCCCCCCCCCCCeEEEEHHHhH
Confidence            344555556431   12334466654 457899999999999975   3  699999999 57975  899999999999


Q ss_pred             HHHHhhccCC
Q psy7307          76 RWIYNTAKGD   85 (117)
Q Consensus        76 ~wi~~~~~gd   85 (117)
                      +||++.++..
T Consensus       228 ~WI~~~i~~~  237 (238)
T 1spj_A          228 KWIEDTIAEN  237 (238)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHhhcC
Confidence            9999988654

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2

Probab=99.45  E-value=8.1e-14  Score=93.88  Aligned_cols=78  Identities=35%  Similarity=0.690  Sum_probs=57.7

Q ss_pred             eeeeccccccCC---cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchH
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLR   76 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~   76 (117)
                      +.+.+...|...   .+....+|+.. ..+++.|+||+|+||+++   +  .++||+||+..|..  .|++|+++..|.+
T Consensus       144 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~  218 (228)
T 1fxy_A          144 APVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCN---G--QLQGVVSWGDGCAQKNKPGVYTKVYNYVK  218 (228)
T ss_dssp             EEBCCHHHHHHHSTTTCCTTEEEESCTTCSCBCCTTCTTCEEEET---T--EEEEEEEECSSSSBTTBCEEEEEGGGGHH
T ss_pred             EEEeCHHHhHhhcCCCCCCCEEEeccCCCCCccccCccccceEEC---C--EEEEEEEECCCCCCCCCCEEEEEhHHHHH
Confidence            344444555431   12334456543 457899999999999985   3  59999999988975  7999999999999


Q ss_pred             HHHhhccCC
Q psy7307          77 WIYNTAKGD   85 (117)
Q Consensus        77 wi~~~~~gd   85 (117)
                      ||++.++..
T Consensus       219 WI~~~~~~~  227 (228)
T 1fxy_A          219 WIKNTIAAN  227 (228)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHhcc
Confidence            999987644

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2

Probab=99.45  E-value=2.3e-13  Score=91.94  Aligned_cols=78  Identities=27%  Similarity=0.465  Sum_probs=60.5

Q ss_pred             eeeeccccccCC-----cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC--CCceeeeccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK--TPGVYVQVNK   73 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~--~p~~~t~v~~   73 (117)
                      +.+.+...|...     .+....+|+... +++.|+||+|+||++.. +++|+++||+||+.  .|..  .|++|+++..
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~-~~~~C~GDSGgPL~~~~-~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~  227 (236)
T 1elt_A          150 LPSVDHATCSSSGWWGSTVKTTMVCAGGG-ANSGCNGDSGGPLNCQV-NGSYYVHGVTSFVSSSGCNASKKPTVFTRVSA  227 (236)
T ss_dssp             CCEECHHHHTSTTTTGGGSCTTEEEECCS-SCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCSSCTTCTTCCEEEEEGGG
T ss_pred             eeecCHHHhccccccCCcCCcceEEecCC-CCccCCCCCCCeeEEEE-CCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHH
Confidence            345566667653     133445677644 48899999999999874 68899999999984  7975  8999999999


Q ss_pred             chHHHHhhc
Q psy7307          74 YLRWIYNTA   82 (117)
Q Consensus        74 ~~~wi~~~~   82 (117)
                      |.+||++.+
T Consensus       228 ~~~WI~~~i  236 (236)
T 1elt_A          228 YISWMNGIM  236 (236)
T ss_dssp             GHHHHHHHC
T ss_pred             hHHHHHhhC
Confidence            999998763

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}

Probab=99.45  E-value=1.5e-13  Score=92.38  Aligned_cols=60  Identities=22%  Similarity=0.351  Sum_probs=50.5

Q ss_pred             eeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC-CCceeeecccchHHHHhhccCC
Q psy7307          21 YDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK-TPGVYVQVNKYLRWIYNTAKGD   85 (117)
Q Consensus        21 ~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~-~p~~~t~v~~~~~wi~~~~~gd   85 (117)
                      +|+... +..+.|+||+|+||++.   ++  ++||+||+..|.. .|++|+++..|.+||++.+++.
T Consensus       170 ~Ca~~~~~~~~~C~GDsGgPl~~~---~~--l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~~~  231 (235)
T 3h7t_A          170 FCAGGEYDETYIGYGDAGDPAVQN---GT--LVGVASYISSMPSEFPSVFLRVGYYVLDIKDIISGK  231 (235)
T ss_dssp             EEECBTTTTBBCCTTCTTCEEEET---TE--EEEEECCCTTCCTTSCEEEEEGGGGHHHHHHHHTTC
T ss_pred             EecCCCCCCCccccCCCCCceeeC---Ce--EEEEEEecCCCCCCCCceEEEHHHHHHHHHHHHhCC
Confidence            444333 47899999999999985   43  9999999988987 8999999999999999998754

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}

Probab=99.44  E-value=8.5e-14  Score=104.94  Aligned_cols=64  Identities=41%  Similarity=0.659  Sum_probs=41.2

Q ss_pred             ceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          20 DYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        20 ~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .+|+... +.+++|+|||||||++...+++|+++||+||+..|..  .|++||++..|.+||++.+.
T Consensus       490 ~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYTrVs~y~~WI~~~i~  556 (565)
T 2xrc_A          490 MECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYHVG  556 (565)
T ss_dssp             EEEEEEC----------CCCEEEEECTTCCEEEEEEECC------CCCCEEEEEGGGGHHHHHHHC-
T ss_pred             eEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEEEHHHHHHHHHHHhc
Confidence            3454433 4578999999999998755689999999999988975  89999999999999999885

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A

Probab=99.44  E-value=1.1e-13  Score=107.57  Aligned_cols=81  Identities=30%  Similarity=0.695  Sum_probs=61.6

Q ss_pred             eeeeccccccCC-----cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAH-----QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~-----~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~   74 (117)
                      +.|.+...|...     .+....+|+.. .++.++|+|||||||++.. .++|+++||+||+..|..  .|++|++|..|
T Consensus       702 v~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSGGPLv~~~-~~~~~LvGIvS~G~gC~~~~~PgVYTrVs~y  780 (791)
T 4dur_A          702 LPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFE-KDKYILQGVTSWGLGCARPNKPGVYVRVSRF  780 (791)
T ss_dssp             EEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEEE-TTEEEEEEECCTTTCCBBTTBCEEEEEGGGT
T ss_pred             EEEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCCCCCcccceEEEe-CCeEEEEEEEEeCCCCCCCCCCeEEEEHHHH
Confidence            444555555432     12333455543 4578999999999999874 578999999999988976  79999999999


Q ss_pred             hHHHHhhccC
Q psy7307          75 LRWIYNTAKG   84 (117)
Q Consensus        75 ~~wi~~~~~g   84 (117)
                      .+||++.++.
T Consensus       781 ~dWI~~~i~~  790 (791)
T 4dur_A          781 VTWIEGVMRN  790 (791)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999998753

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}

Probab=99.44  E-value=5.6e-13  Score=89.86  Aligned_cols=80  Identities=29%  Similarity=0.543  Sum_probs=62.1

Q ss_pred             eeeeccccccCCc------ccccceeec-CCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCC-CCC--CCceeeecc
Q psy7307           3 LCLVLVLICAAHQ------LVRADYDVF-NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGK--TPGVYVQVN   72 (117)
Q Consensus         3 ~~~~~~~~C~~~~------~~~~~~~~~-~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~-C~~--~p~~~t~v~   72 (117)
                      +.+.+...|....      .....+|+. ..++++.|+||+|+||+++   +  .++||+||+.. |..  .|++|+++.
T Consensus       144 ~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~  218 (238)
T 4e7n_A          144 INLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDSGGPLICN---G--QFQGIASWGDDPCAQPHKPAAYTKVF  218 (238)
T ss_dssp             EEEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTTCTTCEEEET---T--EEEEEEEECCSSTTCTTCCEEEEESG
T ss_pred             ccccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCCCCCcceEEC---C--EEEEEEEEeCCCCCCCCCCeEEEEhH
Confidence            4566667776532      233446775 3467899999999999986   3  38999999866 876  899999999


Q ss_pred             cchHHHHhhccCCCC
Q psy7307          73 KYLRWIYNTAKGDSG   87 (117)
Q Consensus        73 ~~~~wi~~~~~gdsg   87 (117)
                      .|.+||++.+++.+.
T Consensus       219 ~~~~WI~~~i~~~~~  233 (238)
T 4e7n_A          219 DHLDWIENIIAGNTD  233 (238)
T ss_dssp             GGHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHhcCCC
Confidence            999999999987654

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=99.43  E-value=1.4e-13  Score=92.52  Aligned_cols=76  Identities=32%  Similarity=0.658  Sum_probs=56.3

Q ss_pred             eeeeccccccCC---cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchH
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLR   76 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~   76 (117)
                      +.+.+...|...   .+....+|+.. ..+++.|+||+|+||+++   +  .++||+||+..|..  .|++|+++..|.+
T Consensus       140 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~C~~~~~p~vyt~V~~~~~  214 (223)
T 3mfj_A          140 APILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCS---G--KLQGIVSWGSGCAQKNKPGVYTKVCNYVS  214 (223)
T ss_dssp             EEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTCEEEET---T--EEEEEEEECSSSSBTTBCEEEEEGGGGHH
T ss_pred             EEEeCHHHhhhhhcCcCCCCEEEccCCCCCCCcCCCCcccceEEC---C--EEEEEEEECCCCCCCCCCeEEEEHHHhHH
Confidence            334444555431   12333456543 457899999999999985   3  49999999988975  7999999999999


Q ss_pred             HHHhhcc
Q psy7307          77 WIYNTAK   83 (117)
Q Consensus        77 wi~~~~~   83 (117)
                      ||++.++
T Consensus       215 WI~~~i~  221 (223)
T 3mfj_A          215 WIKQTIA  221 (223)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998775

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*

Probab=99.43  E-value=1.3e-13  Score=92.86  Aligned_cols=78  Identities=29%  Similarity=0.685  Sum_probs=59.3

Q ss_pred             eeeeccccccCC---cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeecccchH
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYLR   76 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~~   76 (117)
                      +.+.+...|...   .+....+|+....+++.|+||+|+||++.   +  .++||+||+ ..|..  .|++||++..|.+
T Consensus       143 ~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~  217 (227)
T 2psx_A          143 ISVLSQKRCEDAYPRQIDDTMFCAGDKAGRDSCQGDSGGPVVCN---G--SLQGLVSWGDYPCARPNRPGVYTNLCKFTK  217 (227)
T ss_dssp             EEBCCHHHHHHHSTTTCCTTEEEECCSTTCBCCTTCTTCEEEET---T--EEEEEEEECCSSTTCTTCCEEEEEGGGCHH
T ss_pred             EEecCHhHhhhhcCCCCCCCEEcccCCCCCccCCCCCCcceeeC---C--EEEEEEeecCCCCCCCCCCcEEEEHHHhHH
Confidence            344455556431   23344567665567899999999999986   3  599999998 57975  8999999999999


Q ss_pred             HHHhhccCC
Q psy7307          77 WIYNTAKGD   85 (117)
Q Consensus        77 wi~~~~~gd   85 (117)
                      ||++.++.+
T Consensus       218 WI~~~~~~~  226 (227)
T 2psx_A          218 WIQETIQAN  226 (227)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHhcC
Confidence            999988654

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A

Probab=99.43  E-value=2.2e-13  Score=92.28  Aligned_cols=77  Identities=25%  Similarity=0.503  Sum_probs=59.9

Q ss_pred             eeeeccccccC--C-----cccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecc
Q psy7307           3 LCLVLVLICAA--H-----QLVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVN   72 (117)
Q Consensus         3 ~~~~~~~~C~~--~-----~~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~   72 (117)
                      +.+.+...|..  .     .+....+|+... ..++.|+||+|+||+++   +  .++||+||+..|..  .|++|+++.
T Consensus       149 ~~i~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~~---~--~l~Gi~S~g~~C~~~~~p~vyt~v~  223 (240)
T 1mza_A          149 VTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICK---G--VFHAIVSGGHECGVATKPGIYTLLT  223 (240)
T ss_dssp             EEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEET---T--EEEEEECSSCCSSCTTCCEEEEECC
T ss_pred             EEEeCHHHcCCcceeCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEEC---C--EEEEEEEECCCCCCCCCCcEEEeCh
Confidence            45566667762  1     233445677643 56899999999999985   3  59999999988986  899999999


Q ss_pred             c-chHHHHhhccC
Q psy7307          73 K-YLRWIYNTAKG   84 (117)
Q Consensus        73 ~-~~~wi~~~~~g   84 (117)
                      . |.+||++.++.
T Consensus       224 ~~y~~WI~~~~~~  236 (240)
T 1mza_A          224 KKYQTWIKSNLVP  236 (240)
T ss_dssp             HHHHHHHHHHTCC
T ss_pred             HHHHHHHHHhccC
Confidence            8 99999998864

>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=99.43  E-value=2.3e-13  Score=91.07  Aligned_cols=61  Identities=36%  Similarity=0.769  Sum_probs=50.4

Q ss_pred             cceeec-CCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccC
Q psy7307          19 ADYDVF-NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        19 ~~~~~~-~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      ..+|+. .....+.|.||+|+||++.   .  .++||+||+..|..  .|++|+++..|.+||++.++.
T Consensus       159 ~~~Ca~~~~~~~~~C~GDsGgPl~~~---~--~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~~  222 (223)
T 4i8h_A          159 NMFCAGYLEGGKDSCQGDSGGPVVCS---G--KLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIAS  222 (223)
T ss_dssp             TEEEESCTTSSCBCCTTCTTCEEEET---T--EEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred             CeEeccCCCCCCccCCCCCCCcEEEC---C--EEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence            334553 3467899999999999986   3  59999999988875  799999999999999998753

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A

Probab=99.43  E-value=2.3e-13  Score=91.38  Aligned_cols=61  Identities=36%  Similarity=0.741  Sum_probs=50.4

Q ss_pred             ccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          18 RADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        18 ~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      ...+|+.. ...++.|+||+|+||+++   +  .++||+||+..|..  .|++|+++..|.+||++.++
T Consensus       157 ~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~~~  220 (222)
T 1hj8_A          157 NAMFCAGYLEGGKDSCQGDSGGPVVCN---G--ELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMA  220 (222)
T ss_dssp             TTEEEESCTTSSCBCCTTCTTCEEEET---T--EEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCeEEeccCCCCCccCCCCcccceEEC---C--EEEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHHhh
Confidence            33456544 457899999999999985   3  48999999988985  89999999999999998775

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*

Probab=99.42  E-value=2.5e-13  Score=91.86  Aligned_cols=77  Identities=29%  Similarity=0.597  Sum_probs=57.6

Q ss_pred             eeeeccccccC---CcccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAA---HQLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~---~~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|..   ..+....+|+.. ..++++|+||||+||+++   +  +++||+||+. .|..  .|++|+++..|.
T Consensus       152 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~  226 (237)
T 2zch_P          152 LHVISNDVCAQVHPQKVTKFMLCAGRWTGGKSTCSGDSGGPLVCN---G--VLQGITSWGSEPCALPERPSLYTKVVHYR  226 (237)
T ss_dssp             EEEECHHHHHHHCSSBCCTTEEEEECTTCSCBCCTTCTTCEEESS---S--SEEEEEEECCSSTTCTTCCEEEEEGGGGH
T ss_pred             EEEeCHHHhcccccCCCCceEEeecCCCCCCcccCCCccCeEEEC---C--EEEEEEEeCcCCCCCCCCCcEEEEHHHHH
Confidence            44555555643   122334466654 356899999999999975   3  4999999996 6875  899999999999


Q ss_pred             HHHHhhccC
Q psy7307          76 RWIYNTAKG   84 (117)
Q Consensus        76 ~wi~~~~~g   84 (117)
                      +||++.++.
T Consensus       227 ~WI~~~i~~  235 (237)
T 2zch_P          227 KWIKDTIVA  235 (237)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhc
Confidence            999998764

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*

Probab=99.42  E-value=2.6e-13  Score=91.32  Aligned_cols=80  Identities=33%  Similarity=0.576  Sum_probs=59.6

Q ss_pred             eeeeccccccCC----cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCC-CCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAH----QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~----~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~-C~~--~p~~~t~v~~~   74 (117)
                      +.+.+...|...    ......+|+.. .++++.|+||+|+||+++   .+  ++||+||+.. |..  .|++|+++..|
T Consensus       142 ~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~~--l~Gi~S~g~~~C~~~~~p~vyt~V~~~  216 (234)
T 3s69_A          142 INLLDDAVCQAGYPELLTEYRTLCAGILEGGKDTCGGDSGGPLICN---GQ--FQGIVSFGAHPCGQGLKPGVYTKVFDY  216 (234)
T ss_dssp             EEEECHHHHHHHCTTCCTTSCEEEEECTTCSCBCCTTCTTCEEEET---TE--EEEEEEECCSSTTCTTCCEEEEEGGGG
T ss_pred             EeecCHHHHhhhcccccCCcceEeccCCCCCCccCCCCCccceEEc---CE--EEEEEEEcccccCCCCCCcEEeeHHHH
Confidence            345555556431    12333456653 457899999999999986   33  8999999865 886  79999999999


Q ss_pred             hHHHHhhccCCCC
Q psy7307          75 LRWIYNTAKGDSG   87 (117)
Q Consensus        75 ~~wi~~~~~gdsg   87 (117)
                      .+||++.+++.+.
T Consensus       217 ~~WI~~~i~~~~~  229 (234)
T 3s69_A          217 NHWIQSIIAGNTT  229 (234)
T ss_dssp             HHHHHHHHHTCTT
T ss_pred             HHHHHHHhcCCcc
Confidence            9999999986653

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2

Probab=99.41  E-value=3.6e-13  Score=90.36  Aligned_cols=76  Identities=30%  Similarity=0.611  Sum_probs=59.1

Q ss_pred             eeeecccccc-CC-cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC-CCceeeecccchHHHH
Q psy7307           3 LCLVLVLICA-AH-QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK-TPGVYVQVNKYLRWIY   79 (117)
Q Consensus         3 ~~~~~~~~C~-~~-~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~-~p~~~t~v~~~~~wi~   79 (117)
                      +.+.+...|. .. .+....+|+....+++.|+||+|+||+++   +  .++||+||+..|.. .|++|+++..|.+||+
T Consensus       143 ~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~C~~~~p~vyt~V~~~~~WI~  217 (222)
T 1eq9_A          143 LIVHPQKQCERDQWRVIDSHICTLTKRGEGACHGDSGGPLVAN---G--AQIGIVSFGSPCALGEPDVYTRVSSFVSWIN  217 (222)
T ss_dssp             EEEECHHHHHHHSSSCCTTEEEECCCTTCBCCTTCTTCEEEET---T--EEEEEEEECSTTTSSSCEEEEEGGGGHHHHH
T ss_pred             EEEeCHHHhCcccCCCCccEEeecCCCCCeeeeCCccceEEEC---C--EEEEEEEECCCcCCCCCCEEEEHHHHHHHHH
Confidence            4455556665 21 13344567766677899999999999985   3  58999999988987 8999999999999999


Q ss_pred             hhcc
Q psy7307          80 NTAK   83 (117)
Q Consensus        80 ~~~~   83 (117)
                      +.++
T Consensus       218 ~~~~  221 (222)
T 1eq9_A          218 ANLK  221 (222)
T ss_dssp             HTSC
T ss_pred             HHhh
Confidence            8764

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A

Probab=99.41  E-value=3.6e-13  Score=99.39  Aligned_cols=67  Identities=24%  Similarity=0.575  Sum_probs=52.7

Q ss_pred             cceeecCC---CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCC----C--CCc----eeeecccchHHHHhhcc
Q psy7307          19 ADYDVFNR---TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCG----K--TPG----VYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        19 ~~~~~~~~---~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~----~--~p~----~~t~v~~~~~wi~~~~~   83 (117)
                      ..+|+...   .++++|+|||||||++.. .++|+++||+||+.  .|.    .  +|+    +||++..|.+||++.++
T Consensus       412 ~~iCag~~~~~~~~~~C~GDSGGPL~~~~-~~~~~l~GIvS~g~~~~C~~~~~~~~~P~~~r~vyt~V~~~~~WI~~~~~  490 (497)
T 1rrk_A          412 RFLCTGGVSPYADPNTCRGDSGGPLIVHK-RSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQ  490 (497)
T ss_dssp             TEEEEESSSSSCCCCCCGGGTTCEEEEEE-TTEEEEEEEEEEESCCCC--------CCTTCEEEEEEGGGGHHHHHHHTT
T ss_pred             CeEEeCCCCCCCCCcCCCCCCCCeeEEEe-CCEEEEEEEEEecCCCCCCCccccCCCCCccceeeeeHHHHHHHHHHHhC
Confidence            33555543   257899999999999874 57899999999996  698    3  675    99999999999999987


Q ss_pred             CCC
Q psy7307          84 GDS   86 (117)
Q Consensus        84 gds   86 (117)
                      ...
T Consensus       491 ~~~  493 (497)
T 1rrk_A          491 DED  493 (497)
T ss_dssp             TSS
T ss_pred             ccc
Confidence            543

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A

Probab=99.41  E-value=4.6e-13  Score=90.15  Aligned_cols=79  Identities=28%  Similarity=0.448  Sum_probs=61.6

Q ss_pred             eeeeccccccCC----cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC-CCceeeecccch
Q psy7307           3 LCLVLVLICAAH----QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK-TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~----~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~-~p~~~t~v~~~~   75 (117)
                      +.+.+...|...    .+....+|+....+.++|+||+|+||++..   .++++||+||+.  .|.. .|.+|+++..|.
T Consensus       143 ~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPl~~~~---~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~  219 (230)
T 2hlc_A          143 NLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPFVLSD---KNLLIGVVSFVSGAGCESGKPVGFSRVTSYM  219 (230)
T ss_dssp             EEEECHHHHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEEEEGG---GTEEEEEEEECCTTCTTSCCCEEEEEGGGGH
T ss_pred             EEEeCHHHhhhhhCCCcccCCeEEecCCCCCCcCCCCCCCeeEECc---CCEEEEEEEEeCCCCCCCCCCCEEEEhHHhH
Confidence            445566667643    234455777767788999999999999873   347999999975  6866 899999999999


Q ss_pred             HHHHhhccC
Q psy7307          76 RWIYNTAKG   84 (117)
Q Consensus        76 ~wi~~~~~g   84 (117)
                      +||++.++.
T Consensus       220 ~WI~~~~~~  228 (230)
T 2hlc_A          220 DWIQQNTGI  228 (230)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHhhCc
Confidence            999998764

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*

Probab=99.41  E-value=3.9e-13  Score=90.32  Aligned_cols=76  Identities=30%  Similarity=0.620  Sum_probs=56.6

Q ss_pred             eeeeccccccCC---cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|...   .+....+|+.. ...++.|+||+|+||+++   +  +++||+||+. .|..  .|++||++..|.
T Consensus       140 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~  214 (223)
T 2bdg_A          140 VSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICN---G--YLQGLVSFGKAPCGQVGVPGVYTNLCKFT  214 (223)
T ss_dssp             EEBCCHHHHHHHSTTTCCTTEEEECCSTTCCBCCTTCTTCEEEET---T--EEEEEEEECCSSTTCTTCCEEEECGGGTH
T ss_pred             EEEeCHHHhhhhhCCCCCCCeEeccCCCCCCCcCCCCCCchheEc---c--EEEEEEEecCCCCCCCCCCcEEEEHHHhH
Confidence            344455555431   12334466654 457899999999999986   3  5999999985 6975  899999999999


Q ss_pred             HHHHhhcc
Q psy7307          76 RWIYNTAK   83 (117)
Q Consensus        76 ~wi~~~~~   83 (117)
                      +||++.++
T Consensus       215 ~WI~~~i~  222 (223)
T 2bdg_A          215 EWIEKTVQ  222 (223)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhc
Confidence            99998764

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A

Probab=99.41  E-value=3.1e-13  Score=90.67  Aligned_cols=78  Identities=32%  Similarity=0.502  Sum_probs=61.8

Q ss_pred             ceeeeccccccC--CcccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHHH
Q psy7307           2 SLCLVLVLICAA--HQLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWI   78 (117)
Q Consensus         2 ~~~~~~~~~C~~--~~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi   78 (117)
                      ++.+.+...|..  .......+|+.. ...++.|+||+|+||++.   .  +++||+||+..|...|++|+++..|.+||
T Consensus       145 ~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~---~--~l~Gi~S~g~~c~~~p~vyt~v~~~~~WI  219 (226)
T 4ag1_A          145 KLRLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCA---G--VAQGIVSYGRSDAKPPAVFTRISHYRPWI  219 (226)
T ss_dssp             EEEEECGGGGTTSTTCCTTTEEEESCTTSCCBCCTTCTTCEEEET---T--EEEEEEEECBTTCCSCEEEEEHHHHHHHH
T ss_pred             EEEEcChHHcccccCcCccceEeeccCCCCCcCccCCCCCceEEc---C--EEEEEEEECCCCCCCCCEEEEhHHHHHHH
Confidence            356677788873  333445578765 457899999999999985   2  69999999977876799999999999999


Q ss_pred             HhhccC
Q psy7307          79 YNTAKG   84 (117)
Q Consensus        79 ~~~~~g   84 (117)
                      ++.++.
T Consensus       220 ~~~i~~  225 (226)
T 4ag1_A          220 NQILQA  225 (226)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998764

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2

Probab=99.40  E-value=6.9e-13  Score=89.57  Aligned_cols=77  Identities=27%  Similarity=0.500  Sum_probs=61.0

Q ss_pred             eeeeccccccCCc---ccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAHQ---LVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~~---~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|....   +....+|+.. ..+++.|+||+|+||+++   +  .++||+||+ ..|..  .|++|+++..|.
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~  224 (235)
T 1ton_A          150 IHLLSNEKCIETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLICD---G--VLQGITSGGATPCAKPKTPAIYAKLIKFT  224 (235)
T ss_dssp             EEEECGGGCGGGGSTTGGGGEEEEECTTCSCBCCTTCTTCEEEET---T--EEEEEECCCCSSCSCTTCCEEEEEGGGGH
T ss_pred             EEEeCHHHHHHHhcCcCCCCeEeeccCCCCCcCCCCCCccccEEC---C--EEEEEEeeCCCCCCCCCCCeEEEEHHHHH
Confidence            5566777786532   3445578765 457899999999999985   3  599999998 56975  899999999999


Q ss_pred             HHHHhhccC
Q psy7307          76 RWIYNTAKG   84 (117)
Q Consensus        76 ~wi~~~~~g   84 (117)
                      +||++.++.
T Consensus       225 ~WI~~~~~~  233 (235)
T 1ton_A          225 SWIKKVMKE  233 (235)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHcc
Confidence            999998764

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*

Probab=99.40  E-value=4.4e-13  Score=90.44  Aligned_cols=79  Identities=28%  Similarity=0.563  Sum_probs=59.5

Q ss_pred             eeeeccccccCCc--ccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeecccchH
Q psy7307           3 LCLVLVLICAAHQ--LVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYLR   76 (117)
Q Consensus         3 ~~~~~~~~C~~~~--~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~~   76 (117)
                      +.+.+...|....  +....+|+.. ..+++.|+||+|+||+++   +  .++||+||+ ..|..  .|++|+++..|.+
T Consensus       141 ~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~  215 (231)
T 2aiq_A          141 INILDYAVCQAAYKGLAATTLCAGILEGGKDTCKGDSGGPLICN---G--QFQGILSVGGNPCAQPRKPGIYTKVFDYTD  215 (231)
T ss_dssp             EEEECHHHHHHHCTTCCSSEEEEECTTCSCBCCTTCTTCEEEET---T--EEEEEEEEECSSTTCTTCCEEEEEGGGGHH
T ss_pred             ceecchhhhhhhhcCCCcCcEEeccCCCCCcccCCcCCCcEEEC---C--EEEEEEEEeCCCCCCCCCCEEEEEHHHHHH
Confidence            3445555564321  3344466653 467899999999999985   3  599999998 67976  7999999999999


Q ss_pred             HHHhhccCCC
Q psy7307          77 WIYNTAKGDS   86 (117)
Q Consensus        77 wi~~~~~gds   86 (117)
                      ||++.++.+.
T Consensus       216 WI~~~~~~~~  225 (231)
T 2aiq_A          216 WIQSIISGNT  225 (231)
T ss_dssp             HHHHHHHTCS
T ss_pred             HHHHHHcCCC
Confidence            9999987654

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}

Probab=99.40  E-value=1.7e-13  Score=99.73  Aligned_cols=82  Identities=29%  Similarity=0.517  Sum_probs=61.1

Q ss_pred             eeeeccccccCCc---ccccceeecCCCCCCcccCCCCCeeEEEc-----CCCcEEEEEEeecC-CCCCC--CCceeeec
Q psy7307           3 LCLVLVLICAAHQ---LVRADYDVFNRTSRQAQTGDSGGPLLLQR-----PDKQWTIIGVVSWG-IGCGK--TPGVYVQV   71 (117)
Q Consensus         3 ~~~~~~~~C~~~~---~~~~~~~~~~~~~~~~C~~dsG~pl~~~~-----~~~~~~~vgI~s~~-~~C~~--~p~~~t~v   71 (117)
                      +.+.+...|....   .....+|+....++++|+|||||||++..     ..++|+++||+||+ ..|..  .|++||++
T Consensus       282 v~iv~~~~C~~~~~~~~~~~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYTrV  361 (408)
T 2xxl_A          282 VPLQPRSACSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNV  361 (408)
T ss_dssp             EEEECHHHHHHHHTSCCCTTEEEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEEEG
T ss_pred             eeecCHHHHHHHhcccCCCceEeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEEEH
Confidence            4455556664311   22345677666678999999999994321     24689999999999 68986  79999999


Q ss_pred             ccchHHHHhhccC
Q psy7307          72 NKYLRWIYNTAKG   84 (117)
Q Consensus        72 ~~~~~wi~~~~~g   84 (117)
                      ..|.+||++.++.
T Consensus       362 s~y~~WI~~~i~~  374 (408)
T 2xxl_A          362 GEYVQWITDTMAS  374 (408)
T ss_dssp             GGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999888753

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*

Probab=99.40  E-value=4.5e-13  Score=90.01  Aligned_cols=77  Identities=36%  Similarity=0.692  Sum_probs=56.7

Q ss_pred             eeeeccccccCC---cccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|...   .+....+|+... .+++.|+||+|+||+++   +  .++||+||+ ..|..  .|++|+++..|.
T Consensus       139 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~  213 (223)
T 1lo6_A          139 IHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCG---D--HLRGLVSWGNIPCGSKEKPGVYTNVCRYT  213 (223)
T ss_dssp             EEEECHHHHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTCEEEET---T--EEEEEEEECCSSCCCSSSCEEEEEGGGGH
T ss_pred             EEEeCHHHhhhhhCCCCCCCeEEeecCCCCCeeccccCCCcEEeC---C--EEEEEEeeCCCCCCCCCCCcEEEEHHHHH
Confidence            344455555431   223344666543 46899999999999985   3  489999998 57975  899999999999


Q ss_pred             HHHHhhccC
Q psy7307          76 RWIYNTAKG   84 (117)
Q Consensus        76 ~wi~~~~~g   84 (117)
                      +||++.++.
T Consensus       214 ~WI~~~i~~  222 (223)
T 1lo6_A          214 NWIQKTIQA  222 (223)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHHhcc
Confidence            999988753

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*

Probab=99.40  E-value=8.8e-13  Score=88.50  Aligned_cols=78  Identities=22%  Similarity=0.381  Sum_probs=61.2

Q ss_pred             eeeeccccccCCcccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCCCCceeeecccchHHHHh
Q psy7307           3 LCLVLVLICAAHQLVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGKTPGVYVQVNKYLRWIYN   80 (117)
Q Consensus         3 ~~~~~~~~C~~~~~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~~p~~~t~v~~~~~wi~~   80 (117)
                      +.+.+...|...     .+|+... ...+.|+||+|+||++.   +  +++||+||+ ..|...|++|+++..|.+||++
T Consensus       146 ~~~~~~~~C~~~-----~~Ca~~~~~~~~~C~GDSGgPl~~~---g--~l~Gi~S~g~~~C~~~p~vyt~V~~~~~WI~~  215 (225)
T 1a7s_A          146 VTVTPEDQCRPN-----NVCTGVLTRRGGICNGDGGTPLVCE---G--LAHGVASFSLGPCGRGPDFFTRVALFRDWIDG  215 (225)
T ss_dssp             EEECCGGGSCTT-----EEEEECSSSSCBCCTTCTTCEEEET---T--EEEEEEEEECSSTTSSCEEEEEGGGGHHHHHH
T ss_pred             eEECCHHHhccC-----ceEEeccCCCCCcccCCCcchheeC---C--EEEEEEEEccCCcCCCCcEEEEhHHhHHHHHH
Confidence            455666666552     4555543 36799999999999986   3  699999998 5787568999999999999999


Q ss_pred             hccCCCCCce
Q psy7307          81 TAKGDSGGPL   90 (117)
Q Consensus        81 ~~~gdsg~pl   90 (117)
                      .++....+|.
T Consensus       216 ~~~~~~~~p~  225 (225)
T 1a7s_A          216 VLNNPGPGPA  225 (225)
T ss_dssp             HHHSCSCCCC
T ss_pred             HhcCCCCCCC
Confidence            9987776663

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*

Probab=99.39  E-value=3e-13  Score=91.45  Aligned_cols=78  Identities=27%  Similarity=0.506  Sum_probs=58.6

Q ss_pred             eeeeccccccCC---cccccceeec-CCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVF-NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~-~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|...   .+....+|+. ...++++|+||+|+||+++   +  .++||+||+ ..|..  .|++||++..|.
T Consensus       152 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~  226 (237)
T 1ao5_A          152 ITLLPNENCAKVYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLICD---G--ILQGTTSYGPVPCGKPGVPAIYTNLIKFN  226 (237)
T ss_dssp             EEEECHHHHHHHCSSCCCTTEEEEECTTCSCBCCTTCTTCEEEET---T--EEEEEEEECCSSTTCTTCCEEEECGGGGH
T ss_pred             EEecChhHhhhhhcccCCCCEEEEccCCCCCCCCCCCCcceEEEC---C--EEeEEEeEcCCCCCCCCCCcEEEEHHHHH
Confidence            344555556432   2333446665 4467899999999999985   3  599999998 67986  799999999999


Q ss_pred             HHHHhhccCC
Q psy7307          76 RWIYNTAKGD   85 (117)
Q Consensus        76 ~wi~~~~~gd   85 (117)
                      +||++.++.+
T Consensus       227 ~WI~~~~~~n  236 (237)
T 1ao5_A          227 SWIKDTMMKN  236 (237)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHhhc
Confidence            9999987643

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2

Probab=99.39  E-value=2.8e-13  Score=91.61  Aligned_cols=79  Identities=27%  Similarity=0.404  Sum_probs=61.6

Q ss_pred             ceeeeccccccCCc---ccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccc
Q psy7307           2 SLCLVLVLICAAHQ---LVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKY   74 (117)
Q Consensus         2 ~~~~~~~~~C~~~~---~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~   74 (117)
                      ++.+.+...|....   +....+|+.. ...++.|+||+|+||+++   +  .++||+||+. .|..  .|++||++..|
T Consensus       151 ~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~~C~~~~~p~vyt~V~~~  225 (237)
T 1gvz_A          151 ELRLQSNEKCARAYPEKMTEFVLCATHRDDSGSICLGDSGGALICD---G--VFQGITSWGYSECADFNDNFVFTKVMPH  225 (237)
T ss_dssp             EEEEECGGGGCSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEEET---T--EEEEEECCCSSSCEETTTSCCEEESGGG
T ss_pred             EEeEeChhHhhhhhhhcCCCceEEEeeCCCCCccCCCCccCcEeeC---C--EEEEEEEeCCCCCCCCCCCcEEEEHHHH
Confidence            35666777787532   3445577766 456789999999999985   4  4889999996 7974  89999999999


Q ss_pred             hHHHHhhccCC
Q psy7307          75 LRWIYNTAKGD   85 (117)
Q Consensus        75 ~~wi~~~~~gd   85 (117)
                      .+||++.++.+
T Consensus       226 ~~WI~~~~~~~  236 (237)
T 1gvz_A          226 KKWIKETIEKN  236 (237)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHhcc
Confidence            99999987643

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*

Probab=99.39  E-value=1.3e-12  Score=87.98  Aligned_cols=79  Identities=29%  Similarity=0.523  Sum_probs=61.7

Q ss_pred             eeeeccccccCCc----ccccceeec-CCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCC-CCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAHQ----LVRADYDVF-NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~~----~~~~~~~~~-~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~-C~~--~p~~~t~v~~~   74 (117)
                      +.+.+...|....    .....+|+. ..++++.|+||+|+||+++   ..  ++||+||+.. |..  .|++|+++..|
T Consensus       142 ~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~---~~--l~Gi~S~g~~~C~~~~~p~vyt~V~~y  216 (234)
T 3s9c_A          142 IFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSGGPLICN---GE--MHGIVAGGSEPCGQHLKPAVYTKVFDY  216 (234)
T ss_dssp             EEEECGGGTTTTCTTSCTTSSEEEEECTTSSCBCCTTCTTCEEEET---TE--EEEEEEECCSSTTCTTCCEEEEEGGGG
T ss_pred             eEecCHHHhhhcccCCCCCcceEEeecCCCCCccCCCCCCCeEEEe---CC--cEEEEEEeCCCCCCCCCCcEEEEhHHh
Confidence            4566677776532    234456775 3567899999999999986   33  9999999865 886  79999999999


Q ss_pred             hHHHHhhccCCC
Q psy7307          75 LRWIYNTAKGDS   86 (117)
Q Consensus        75 ~~wi~~~~~gds   86 (117)
                      .+||++.++++.
T Consensus       217 ~~WI~~~i~~~~  228 (234)
T 3s9c_A          217 NNWIQSIIAGNR  228 (234)
T ss_dssp             HHHHHHHHHTCS
T ss_pred             HHHHHHHHcCCC
Confidence            999999987653

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*

Probab=99.39  E-value=5.1e-13  Score=89.68  Aligned_cols=75  Identities=31%  Similarity=0.567  Sum_probs=55.3

Q ss_pred             eeeeccccccCC----cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAH----QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~----~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|...    .+....+|+.. ...++.|+||+|+||++.  ++  .++||+||+..|..  .|++|+++..|.
T Consensus       142 ~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~--~g--~l~Gi~S~g~~C~~~~~p~vyt~V~~~~  217 (224)
T 1pq7_A          142 VPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGGPIVDS--SN--TLIGAVSWGNGCARPNYSGVYASVGALR  217 (224)
T ss_dssp             EEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEECT--TC--CEEEEEEECSSSSCTTCCEEEEETTTSH
T ss_pred             EEEEcHHHhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCCcceECc--CC--eEEEEEEeCCCCCCCCCCeEEEEHHHHH
Confidence            344455555431    12334456543 457899999999999975  24  59999999988986  799999999999


Q ss_pred             HHHHhh
Q psy7307          76 RWIYNT   81 (117)
Q Consensus        76 ~wi~~~   81 (117)
                      +||++.
T Consensus       218 ~WI~~~  223 (224)
T 1pq7_A          218 SFIDTY  223 (224)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            999875

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2

Probab=99.39  E-value=3.7e-13  Score=91.19  Aligned_cols=77  Identities=30%  Similarity=0.520  Sum_probs=58.7

Q ss_pred             eeeeccccccCCc---ccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAHQ---LVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~~---~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|....   +....+|+.. ..+.+.|+||+|+||+++   +  .++||+||+ ..|..  .|++|+++..|.
T Consensus       155 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~~C~~~~~p~vyt~V~~~~  229 (240)
T 1sgf_A          155 LKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICD---G--ILQGITSWGPEPCGEPTEPSVYTKLIKFS  229 (240)
T ss_dssp             EEEECTHHHHTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEET---T--EEEEEECCCCSSCCCSSCCEEEEESGGGH
T ss_pred             eeEeCHHHhhhhhCCCcCCCeEeEccCCCCCCCCCCCCcCcEEEc---c--EEEEEEEECCCCCCCCCCCeEEEeHHHHH
Confidence            4555666665421   3344466654 356789999999999985   3  599999998 56975  899999999999


Q ss_pred             HHHHhhccC
Q psy7307          76 RWIYNTAKG   84 (117)
Q Consensus        76 ~wi~~~~~g   84 (117)
                      +||++.++.
T Consensus       230 ~WI~~~~~~  238 (240)
T 1sgf_A          230 SWIRETMAN  238 (240)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHhc
Confidence            999998864

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*

Probab=99.39  E-value=6.4e-13  Score=98.48  Aligned_cols=65  Identities=20%  Similarity=0.431  Sum_probs=53.2

Q ss_pred             ceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCC---------C--CC------ceeeecccchHHHHh
Q psy7307          20 DYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCG---------K--TP------GVYVQVNKYLRWIYN   80 (117)
Q Consensus        20 ~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~---------~--~p------~~~t~v~~~~~wi~~   80 (117)
                      .+|+....++++|+|||||||++.. .++|+++||+||+.  .|.         +  +|      .+||++..|.+||++
T Consensus       420 ~iCag~~~~~~~C~GDSGGPL~~~~-~~~~~l~GIvS~G~~~~C~~~~~~~~~~~~~~Pg~~y~~~vyt~V~~~~~WI~~  498 (509)
T 2odp_A          420 FLCSGTQEDESPCKGESGGAVFLER-RFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQ  498 (509)
T ss_dssp             EEEECCTTCCCCCGGGTTCEEEEEE-TTEEEEEEEEEEESCCTTC-----CCCCCCCTTCSSCCCEEEEEGGGCHHHHHH
T ss_pred             EEEeCCCCCCcccCCCccCceEEEE-CCeEEEEEEEEEcCCCCCCCcccccccccCcccCCCCCCceeeeHHHHhHHHHH
Confidence            3565555678999999999999874 57999999999985  595         2  44      489999999999999


Q ss_pred             hccCC
Q psy7307          81 TAKGD   85 (117)
Q Consensus        81 ~~~gd   85 (117)
                      .++.+
T Consensus       499 ~~~~~  503 (509)
T 2odp_A          499 HLGDV  503 (509)
T ss_dssp             HHTTT
T ss_pred             HhCCc
Confidence            98744

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A

Probab=99.38  E-value=6e-13  Score=89.88  Aligned_cols=77  Identities=35%  Similarity=0.643  Sum_probs=59.2

Q ss_pred             eeeeccccccCC---cccc----cceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC--CCceeee
Q psy7307           3 LCLVLVLICAAH---QLVR----ADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK--TPGVYVQ   70 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~----~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~--~p~~~t~   70 (117)
                      +.+.+...|...   .+..    ..+|+.. ..++++|+||+|+||+++   +  .++||+||+.  .|..  .|++|++
T Consensus       143 ~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~~~C~~~~~p~vyt~  217 (234)
T 1orf_A          143 ITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCE---G--VFRGVTSFGLENKCGDPRGPGVYIL  217 (234)
T ss_dssp             EEEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEET---T--EEEEEEEECCTTCTTCTTSCEEEEE
T ss_pred             EEeeCHHHcCCccccccCCccCCCEEEecCCCCCCcCCCCCCCCeEEEC---C--EEEEEEEEcCCCCCCCCCCCCEEEE
Confidence            456666777621   1222    4577765 357899999999999985   3  5999999996  7975  7999999


Q ss_pred             cc-cchHHHHhhccC
Q psy7307          71 VN-KYLRWIYNTAKG   84 (117)
Q Consensus        71 v~-~~~~wi~~~~~g   84 (117)
                      +. .|.+||++.+++
T Consensus       218 v~~~~~~WI~~~~~~  232 (234)
T 1orf_A          218 LSKKHLNWIIMTIKG  232 (234)
T ss_dssp             CCHHHHHHHHHHHCC
T ss_pred             chHHHHHHHHHHHHh
Confidence            99 999999998764

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A

Probab=99.38  E-value=5.2e-13  Score=89.76  Aligned_cols=77  Identities=39%  Similarity=0.684  Sum_probs=56.9

Q ss_pred             eeeeccccccCC---cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|...   .+....+|+.. ...++.|+||+|+||+++   +  .++||+||+ ..|..  .|++|+++..|.
T Consensus       139 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~  213 (224)
T 2qxi_A          139 VKLISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPLVCR---G--TLQGLVSWGTFPCGQPNDPGVYTQVCKFT  213 (224)
T ss_dssp             EEEECHHHHHHHHGGGCCTTEEEEECTTCCCBCCTTCTTCEEEET---T--EEEEEEEECCSSSCCTTCCEEEEEGGGSH
T ss_pred             eeecCHHHhhHHhcCcCCCCeEEecCCCCCCccCCCCccccEEEC---C--EEEEEEEeCCCCCCCCCCCeEEEEHHHHH
Confidence            344455555431   12334456654 456899999999999985   3  499999998 57975  899999999999


Q ss_pred             HHHHhhccC
Q psy7307          76 RWIYNTAKG   84 (117)
Q Consensus        76 ~wi~~~~~g   84 (117)
                      +||++.++.
T Consensus       214 ~WI~~~~~~  222 (224)
T 2qxi_A          214 KWINDTMKK  222 (224)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999988753

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=99.38  E-value=5.9e-13  Score=92.44  Aligned_cols=64  Identities=16%  Similarity=0.236  Sum_probs=50.1

Q ss_pred             ccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccCC
Q psy7307          18 RADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKGD   85 (117)
Q Consensus        18 ~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~gd   85 (117)
                      ...+|+....+  .|.+|+|+||++. .+++|+++||+||+ .|..  .|++||++..|.+||++.++..
T Consensus       213 ~~~~Ca~~~~~--~~~gDSGgPlv~~-~~~~~~l~GIvS~g-~c~~~~~p~vyt~V~~y~~WI~~~~~~~  278 (283)
T 3f1s_B          213 TRTYCERSSVA--AMHWMDGSVVTRE-HRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLWFKQIMNAH  278 (283)
T ss_dssp             TTEEEEECSSC--GGGBCTTCEEEEE-CSSCEEEEEEECCC-SGGGCSSEEEEEEGGGGHHHHHHHHTC-
T ss_pred             CCeEcccCCCC--CCCCCCCCcEEEE-ECCEEEEEEEEEeC-CCCCCCcceEEEEhHHhHHHHHHHhhcc
Confidence            33455544444  4566999999987 46899999999998 5654  7899999999999999998754

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2

Probab=99.37  E-value=6.5e-13  Score=89.39  Aligned_cols=77  Identities=25%  Similarity=0.470  Sum_probs=58.1

Q ss_pred             eeeeccccccCC--cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC-CCceeeecccchHH
Q psy7307           3 LCLVLVLICAAH--QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK-TPGVYVQVNKYLRW   77 (117)
Q Consensus         3 ~~~~~~~~C~~~--~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~-~p~~~t~v~~~~~w   77 (117)
                      +.+.+...|...  .+....+|+....++++|+||+|+||+.+   +  .++||+||+.  .|.. .|++|+++..|.+|
T Consensus       143 ~~i~~~~~C~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~W  217 (226)
T 1azz_A          143 VPIMSNADCDAVYGIVTDGNICIDSTGGKGTCNGDSGGPLNYN---G--LTYGITSFGAAAGCEAGYPDAFTRVTYFLDW  217 (226)
T ss_dssp             EEEECHHHHHHHHSCCCTTEEEECCTTTCBCCTTCTTCEEEET---T--EEEEEEEEEETTCTTSCCCEEEEESGGGHHH
T ss_pred             EEEEChhHhhhhhCcCCCceEeecCCCCCccCCCCCCcceEEC---C--EEEEEEEEECCCCCCCCCCCEEEEHHHHHHH
Confidence            445555555432  13344566665667899999999999953   3  6999999985  6876 89999999999999


Q ss_pred             HHhhccC
Q psy7307          78 IYNTAKG   84 (117)
Q Consensus        78 i~~~~~g   84 (117)
                      |++.++.
T Consensus       218 I~~~~~~  224 (226)
T 1azz_A          218 IQTQTGI  224 (226)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhCC
Confidence            9998764

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0

Probab=99.35  E-value=9.8e-13  Score=88.16  Aligned_cols=76  Identities=25%  Similarity=0.420  Sum_probs=56.7

Q ss_pred             eeeeccccccCC----cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC-CCceeeecccchHH
Q psy7307           3 LCLVLVLICAAH----QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK-TPGVYVQVNKYLRW   77 (117)
Q Consensus         3 ~~~~~~~~C~~~----~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~-~p~~~t~v~~~~~w   77 (117)
                      +.+.+...|...    .+....+|+.... .+.|+||+|+||+++   +  .++||+||+..|.. .|++|+++..|.+|
T Consensus       147 ~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~-~~~C~GDsGgPl~~~---~--~l~Gi~S~g~~c~~~~p~vyt~v~~~~~W  220 (228)
T 3h7o_A          147 LTVVDLDECRTKYGPIFLSLQVFCAQKVG-VSLESGDAGDPTVQQ---D--TLVGVAAYFPKRPEGAPEVFTKVGSYVSW  220 (228)
T ss_dssp             EEEECHHHHHHHHTTSCCCSSEEEEECTT-CCCCGGGTTCEEEET---T--EEEEEECCCTTCCTTCCEEEEEGGGTHHH
T ss_pred             eEEEcHHHHHHHhcCccCCceEEecCCCC-CcCCCCCCCCcceec---C--eEEEEEeecCcCCCCCCcEEEEHHHHHHH
Confidence            344455555431    1233345655444 889999999999985   3  39999999978887 89999999999999


Q ss_pred             HHhhccC
Q psy7307          78 IYNTAKG   84 (117)
Q Consensus        78 i~~~~~g   84 (117)
                      |++.++.
T Consensus       221 I~~~i~~  227 (228)
T 3h7o_A          221 IQDIIKK  227 (228)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhhc
Confidence            9998764

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A

Probab=99.35  E-value=1.5e-12  Score=87.20  Aligned_cols=76  Identities=28%  Similarity=0.493  Sum_probs=57.0

Q ss_pred             eeeeccccccCC----cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHH
Q psy7307           3 LCLVLVLICAAH----QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRW   77 (117)
Q Consensus         3 ~~~~~~~~C~~~----~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~w   77 (117)
                      +.+.+...|...    ......+|+.. ....+.|++|+|+||+++   .  .++||+||+..|...|++|+++..|.+|
T Consensus       146 ~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~---~--~l~Gi~S~g~~c~~~p~vyt~V~~~~~W  220 (227)
T 3fzz_A          146 LTVQKDQVCESQFQSSYNRANEICVGDSKIKGASFEEDSGGPLVCK---R--AAAGIVSYGQTDGSAPQVFTRVLSFVSW  220 (227)
T ss_dssp             EEBCCHHHHHHHHTTTCCTTTEEEECCCSSCBCCTTTTTTCEEEET---T--EEEEEEEECCTTCSSSEEEEEGGGTHHH
T ss_pred             eeeecHHHhhhhhccccCCCceEEEeCCCCCCcccccCCccceEEe---c--CCcEEEEECCCCCCCCeEEEEhHHhHHH
Confidence            445555556431    11333456654 456889999999999986   2  5899999997787679999999999999


Q ss_pred             HHhhcc
Q psy7307          78 IYNTAK   83 (117)
Q Consensus        78 i~~~~~   83 (117)
                      |++.++
T Consensus       221 I~~~i~  226 (227)
T 3fzz_A          221 IKKTMK  226 (227)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            998875

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2

Probab=99.35  E-value=2.5e-12  Score=86.05  Aligned_cols=77  Identities=31%  Similarity=0.465  Sum_probs=60.3

Q ss_pred             ceeeeccccccC--CcccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHHH
Q psy7307           2 SLCLVLVLICAA--HQLVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWI   78 (117)
Q Consensus         2 ~~~~~~~~~C~~--~~~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi   78 (117)
                      ++.+.+...|..  .......+|+... ...+.|.||+|+||++.   .  +++||+||+..|...|++|+++..|.+||
T Consensus       145 ~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~---~--~l~Gi~S~g~~c~~~p~vyt~v~~y~~WI  219 (224)
T 3rp2_A          145 ELRIMDEKACVDYRYYEYKFQVCVGSPTTLRAAFMGDSGGPLLCA---G--VAHGIVSYGHPDAKPPAIFTRVSTYVPWI  219 (224)
T ss_dssp             EEEEECGGGTTTTTCCCTTTEEEECCTTSCCBCCTTTTTCEEEET---T--EEEEEEEECCTTCCSCEEEEEHHHHHHHH
T ss_pred             eeeecChHHhccccccCcCCEEEecCCCCCCeeccCCCCCeEEEc---c--eeeEEEEECCCCCCCCcEEEEHHHhHHHH
Confidence            356677788874  2234445777654 46899999999999985   2  69999999977876799999999999999


Q ss_pred             Hhhcc
Q psy7307          79 YNTAK   83 (117)
Q Consensus        79 ~~~~~   83 (117)
                      ++.++
T Consensus       220 ~~~i~  224 (224)
T 3rp2_A          220 NAVIN  224 (224)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            98763

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2

Probab=99.34  E-value=6.1e-13  Score=89.39  Aligned_cols=75  Identities=31%  Similarity=0.615  Sum_probs=56.9

Q ss_pred             eeeeccccccCC---cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeecccchH
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYLR   76 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~~   76 (117)
                      +.+.+...|...   .+....+|+....+++.|+||+|+||++.   +  .++||+||+ ..|..  .|++||++..|.+
T Consensus       144 ~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~---~--~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~  218 (225)
T 1npm_A          144 VKIYSQNKCERAYPGKITEGMVCAGSSNGADTCQGDSGGPLVCD---G--MLQGITSWGSDPCGKPEKPGVYTKICRYTT  218 (225)
T ss_dssp             EEECCHHHHHHHSTTTCCTTEEEEECTTCCBCCTTCTTCEEEET---T--EEEEEEEECCSSSCBTTBCEEEEEHHHHHH
T ss_pred             EeeecHHHhhHHhCCCCCCCEEeecCCCCCeecCCCCCchheEC---C--EEEEEEEeCCCCCCCCCCCeEEEEHHHHHH
Confidence            445555566432   23344567765557899999999999985   3  488999998 56975  8999999999999


Q ss_pred             HHHhhc
Q psy7307          77 WIYNTA   82 (117)
Q Consensus        77 wi~~~~   82 (117)
                      ||++.+
T Consensus       219 WI~~~~  224 (225)
T 1npm_A          219 WIKKTM  224 (225)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            999875

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A

Probab=99.33  E-value=2.3e-12  Score=86.55  Aligned_cols=74  Identities=30%  Similarity=0.556  Sum_probs=56.5

Q ss_pred             eeeeccccccCCc-----ccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccc
Q psy7307           3 LCLVLVLICAAHQ-----LVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKY   74 (117)
Q Consensus         3 ~~~~~~~~C~~~~-----~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~   74 (117)
                      +.+.+...|....     +....+|+.. ..++.|+||+|+||++.   +  .++||+|++. .|..  .|++|+++..|
T Consensus       146 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~-~~~~~C~GDsGgPL~~~---~--~l~Gi~s~g~~~C~~~~~p~vyt~V~~~  219 (228)
T 2xw9_A          146 LPVLDRATCNRRTHHDGAITERLMCAES-NRRDSCKGDAGGPLVCG---G--VLEGVVTSGSRVCGNRKKPGIYTRVASY  219 (228)
T ss_dssp             CCEECHHHHTSTTTTTTCCCTTEEEECC-SSCBCCTTCTTCEEEET---T--EEEEEECCSCCCSSCTTSCEEEEEGGGG
T ss_pred             EEEcChhHhcCccccCCcccCCEEecCC-CCCccCCCCCcccEEEC---C--EEEEEEeecCCcCCCCCCCcEEEEHHHH
Confidence            3455566675422     2344467654 56789999999999985   3  6999999986 6875  79999999999


Q ss_pred             hHHHHhhc
Q psy7307          75 LRWIYNTA   82 (117)
Q Consensus        75 ~~wi~~~~   82 (117)
                      .+||++.+
T Consensus       220 ~~WI~~~i  227 (228)
T 2xw9_A          220 AAWIDSVL  227 (228)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99999875

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*

Probab=99.31  E-value=3.4e-12  Score=85.71  Aligned_cols=75  Identities=33%  Similarity=0.507  Sum_probs=54.9

Q ss_pred             eeeeccccccCCc---ccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC-CCceeeecccchHH
Q psy7307           3 LCLVLVLICAAHQ---LVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK-TPGVYVQVNKYLRW   77 (117)
Q Consensus         3 ~~~~~~~~C~~~~---~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~-~p~~~t~v~~~~~w   77 (117)
                      +.+.+...|....   .....+|+... ..++.|+||+|+||+++   +  +++||+||+. |.. .|++|+++..|.+|
T Consensus       144 ~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g~-~~~~~p~vyt~V~~~~~W  217 (224)
T 1cgh_A          144 LRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCN---N--VAHGIVSYGK-SSGVPPEVFTRVSSFLPW  217 (224)
T ss_dssp             EEBCCHHHHHHHCTTCCTTTEEEECCTTSCCBCCTTCTTCEEEET---T--EEEEEEEECC-TTCCSCEEEEEGGGGHHH
T ss_pred             EEeeCHHHHHHHhCcCCCcceEeeccCCCCCeEeeCCCccceEEc---c--EEEEEEEEEC-CCCCCCeEEEEHHHhHHH
Confidence            3444555554311   12224666544 46899999999999985   3  6999999995 555 89999999999999


Q ss_pred             HHhhcc
Q psy7307          78 IYNTAK   83 (117)
Q Consensus        78 i~~~~~   83 (117)
                      |++.++
T Consensus       218 I~~~~~  223 (224)
T 1cgh_A          218 IRTTMR  223 (224)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            998765

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A

Probab=99.30  E-value=3.1e-12  Score=85.99  Aligned_cols=58  Identities=33%  Similarity=0.605  Sum_probs=48.2

Q ss_pred             ceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccC
Q psy7307          20 DYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        20 ~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      .+|+... ..++.|+||+|+||+++   +  .++||+||+  |..  .|++|+++..|.+||++.++.
T Consensus       166 ~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~S~g--c~~~~~p~vyt~v~~~~~WI~~~~~~  226 (227)
T 1iau_A          166 ELCVGDPEIKKTSFKGDSGGPLVCN---K--VAQGIVSYG--RNNGMPPRACTKVSSFVHWIKKTMKR  226 (227)
T ss_dssp             EEEESCTTSCCBCCTTCTTSEEEET---T--EEEEEEEEE--CTTSCSCEEEEEGGGGHHHHHHHHHC
T ss_pred             EEEeECCCCCCeeeecCCCchheEe---e--EEEEEEeEe--cCCCCCCeEEEEHHHHHHHHHHHHhh
Confidence            4666554 36899999999999985   3  599999998  654  799999999999999988753

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=99.30  E-value=4.1e-12  Score=97.70  Aligned_cols=57  Identities=26%  Similarity=0.696  Sum_probs=50.2

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC-----CC-----ceeeecccchHHHHhhccCC
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK-----TP-----GVYVQVNKYLRWIYNTAKGD   85 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~-----~p-----~~~t~v~~~~~wi~~~~~gd   85 (117)
                      ++++|+|||||||++.. +++|+++||+||+.  .|..     .|     ++|+++..|.+||++.++++
T Consensus       666 ~~~~C~GDSGGPL~~~~-~~~~~lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~~  734 (741)
T 3hrz_D          666 DPNTCRGDSGGPLIVHK-RSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDE  734 (741)
T ss_dssp             CCCCCGGGTTCEEEEEE-TTEEEEEEEEEEESSCCCC------CCCTTCEEEEEEGGGSHHHHHHHTTTS
T ss_pred             CCCcCcCcccCceEEee-CCeEEEEEEEeecCCcccCCcccccCCCCCccceEEEhHHhHHHHHHHhcCC
Confidence            67899999999999884 68999999999996  7853     56     89999999999999999875

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.29  E-value=4.5e-12  Score=89.12  Aligned_cols=77  Identities=17%  Similarity=0.237  Sum_probs=55.2

Q ss_pred             eeeeccccccCC---cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHH
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRW   77 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~w   77 (117)
                      +.+.+...|...   .+....+|+....+  .|.+|+|+||+... +++|+++||+|++ .|..  .|++||++..|.+|
T Consensus       236 v~~~~~~~C~~~~~~~~~~~~~Ca~~~~~--~~~gDsGgPl~~~~-~~~~~l~Gi~S~g-~~~~~~~p~vyt~V~~y~~W  311 (317)
T 3h5c_B          236 VTLVEGEECGQVLNVTVTTRTYCERSSVA--AMHWMDGSVVTREH-RGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLW  311 (317)
T ss_dssp             EEEECHHHHHHHHTCCCCTTEEEEECSCC--CCCCCTTCEEEEEE-TTEEEEEEEECCC-CSSCCTTEEEEEEGGGCHHH
T ss_pred             EEEECHHHHhhhhcCcCCCceeECCCCCC--CcCCCCCCCEEEec-CCEEEEEEEEEEC-CCCCCCcceEEEEhHHhHHH
Confidence            444455555431   23334455544433  57889999999873 6799999999998 5654  88999999999999


Q ss_pred             HHhhcc
Q psy7307          78 IYNTAK   83 (117)
Q Consensus        78 i~~~~~   83 (117)
                      |++.++
T Consensus       312 I~~~i~  317 (317)
T 3h5c_B          312 FKQIMN  317 (317)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            998763

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*

Probab=99.29  E-value=1e-11  Score=82.97  Aligned_cols=58  Identities=28%  Similarity=0.557  Sum_probs=48.0

Q ss_pred             ceeecCCC-CCCcccCCCCCeeEEEcCCCcEEEEEEeec--CCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          20 DYDVFNRT-SRQAQTGDSGGPLLLQRPDKQWTIIGVVSW--GIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        20 ~~~~~~~~-~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~--~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .+|+.... ..+.|+||+|+||+++   +  .++||+||  +. |..  +|++|+++..|.+||++.++
T Consensus       156 ~~Ca~~~~~~~~~C~GDSGgPl~~~---~--~l~Gi~S~~~g~-C~~~~~p~vyt~V~~~~~WI~~~~~  218 (218)
T 2z7f_E          156 NVCTLVRGRQAGVCFGDSGSPLVCN---G--LIHGIASFVRGG-CASGLYPDAFAPVAQFVNWIDSIIQ  218 (218)
T ss_dssp             SEEEECTTSCCBCCTTCTTCEEEET---T--EEEEEEEEESSS-TTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred             eeeeccCCCCCeeCCCcCCCceEEc---c--EEEEEEEeCCcc-CCCCCCCeEEEEHHHhHHHHHHHhC
Confidence            45555444 6899999999999985   3  59999999  74 976  79999999999999998753

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2

Probab=99.24  E-value=1.8e-11  Score=82.27  Aligned_cols=74  Identities=30%  Similarity=0.530  Sum_probs=55.5

Q ss_pred             eeeeccccccCCc---ccccceeecCCCC-CCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchH
Q psy7307           3 LCLVLVLICAAHQ---LVRADYDVFNRTS-RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLR   76 (117)
Q Consensus         3 ~~~~~~~~C~~~~---~~~~~~~~~~~~~-~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~   76 (117)
                      +.+.+...|....   +....+|+..... ...|+||+|+||++.   +  +++||+||+  |..  .|++||++..|.+
T Consensus       145 ~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~~~GDsGgPL~~~---~--~l~Gi~S~g--c~~~~~p~vyt~V~~y~~  217 (227)
T 1euf_A          145 LEVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDSGGPLVCN---G--VAQGIVSYG--RNDGTTPDVYTRISSFLS  217 (227)
T ss_dssp             EEBCCTHHHHTTCTTCCTTTEEEESCTTSCCBCCTTCTTCEEEET---T--EEEEEEEEC--CTTCCSCEEEEEGGGTHH
T ss_pred             eccccHHHhhHhhcCcCCCcEEEccCCCCCCcccccCCCCceEEC---C--EEEEEEEEe--CCCCCCCeEEEEHHHhHH
Confidence            4555666675422   3344567655443 567899999999985   3  599999998  654  7999999999999


Q ss_pred             HHHhhcc
Q psy7307          77 WIYNTAK   83 (117)
Q Consensus        77 wi~~~~~   83 (117)
                      ||++.++
T Consensus       218 WI~~~~~  224 (227)
T 1euf_A          218 WIHSTMR  224 (227)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHHh
Confidence            9999875

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2

Probab=99.20  E-value=5.9e-11  Score=79.29  Aligned_cols=59  Identities=34%  Similarity=0.632  Sum_probs=47.7

Q ss_pred             ceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccchHHHHhhcc
Q psy7307          20 DYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        20 ~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .+|+... ...+.|+||+|+||++.   +  .++||+|++. +|..  .|++|+++..|.+||++.++
T Consensus       159 ~~Ca~~~~~~~~~C~GDSGgPL~~~---~--~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i~  221 (221)
T 1fuj_A          159 NICTFVPRRKAGICFGDSGGPLICD---G--IIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTLR  221 (221)
T ss_dssp             EEEEECSSSSCBCCTTCTTCEEEET---T--EEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred             eeeeccCCCCCCCCCCCCCCeeEEC---C--EEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHhC
Confidence            4555544 46789999999999985   3  5999999953 4875  79999999999999998764

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...

Probab=99.08  E-value=8.2e-12  Score=73.97  Aligned_cols=64  Identities=28%  Similarity=0.488  Sum_probs=47.1

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ++.+.+.+++.. .|.+ +....  ..+|.. ...+++|++||||||++.. .++|+|+||+|||.+|+.
T Consensus         7 L~~~~v~i~~~~-~C~~~~~~~i~~~~iCa~-~~~~~~C~GDSGGPL~~~~-~~~~~l~GIvS~g~~c~~   73 (97)
T 1yph_E            7 LQQASLPLLSNT-NCKKYWGTKIKDAMICAG-ASGVSSCMGDSGGPLVCKK-NGAWTLVGIVSWGSSTCS   73 (97)
T ss_dssp             CEEEEEEBCCHH-HHHHHHGGGCCTTEEEEE-CSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCTTCC
T ss_pred             ceEEEEEECCHH-HhhHHhcCCCCCceEeec-CCCCCCCcCCCCCcEEEEe-CCeEEEEEEEEeCCCCCC
Confidence            566788888777 7875 32111  234544 2246899999999999985 789999999999998764

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=98.94  E-value=1.6e-10  Score=82.53  Aligned_cols=70  Identities=17%  Similarity=0.398  Sum_probs=49.8

Q ss_pred             CCcEEEEEEeecCCCCCC-CCc-----------------ee--eeccc-chHHHHhhccCCCCCceeecc-CCCcEEEEE
Q psy7307          46 DKQWTIIGVVSWGIGCGK-TPG-----------------VY--VQVNK-YLRWIYNTAKGDSGGPLLLQR-PDKQWTIIG  103 (117)
Q Consensus        46 ~~~~~~vgI~s~~~~C~~-~p~-----------------~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~-~~~~~~l~G  103 (117)
                      .++++.+.+++.. .|.+ +..                 ..  ..+|. +....+++|+|||||||++.+ .+++|+|+|
T Consensus       236 ~L~~~~v~iv~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvG  314 (347)
T 4f4o_C          236 HLKYVMLPVADQE-KCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAG  314 (347)
T ss_dssp             SCEEEEEEEECHH-HHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEE
T ss_pred             cceEEEEEEeCHH-HHHHHhccccccccccccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEE
Confidence            3677888888776 6643 110                 01  12333 445567899999999999975 478999999


Q ss_pred             eeeeCcccccccC
Q psy7307         104 VVSWGIGCAQVLK  116 (117)
Q Consensus       104 i~s~~~~C~~~~~  116 (117)
                      |+|||.+|+...+
T Consensus       315 IvS~G~~C~~~~p  327 (347)
T 4f4o_C          315 ILSFDKSCRTAEY  327 (347)
T ss_dssp             EEEECCCTTTSSC
T ss_pred             EEEeCCCCCCCCC
Confidence            9999999987543

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A

Probab=98.91  E-value=2e-10  Score=76.39  Aligned_cols=52  Identities=23%  Similarity=0.377  Sum_probs=44.4

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhcc
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~   83 (117)
                      ..+.|.||||+||++.  ++  .++||+|++..|...|.+|+++..|.+||++.+.
T Consensus       163 ~~~~C~GDSGgPl~~~--~g--~lvGi~S~g~~c~~~p~v~t~v~~~~~WI~~~~~  214 (215)
T 1p3c_A          163 TIDTFSGNSGSAMLDQ--NQ--QIVGVHNAGYSNGTINGGPKATAAFVEFINYAKA  214 (215)
T ss_dssp             CCCCCTTCTTCEEECT--TS--CEEEECCEEEGGGTEEEEEBCCHHHHHHHHHHHT
T ss_pred             ccccCCCCCCCeeEcc--CC--eEEEEEecccCCCccCceeEechHHHHHHHHHhc
Confidence            5789999999999975  24  5999999986776678899999999999998764

>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}

Probab=98.90  E-value=4.6e-10  Score=77.07  Aligned_cols=66  Identities=30%  Similarity=0.587  Sum_probs=47.3

Q ss_pred             CcEEEEEEeecCCCCCC-CCc--ee---eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG--VY---VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~--~~---t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      .+...+.+++.. .|.+ +..  ..   ..++......+++|+|||||||++. .+++|+|+||+|||.+|+..
T Consensus       177 l~~~~~~i~~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~-~~~~~~lvGIvS~G~~C~~~  248 (276)
T 2vnt_A          177 LKMTVVKLISHR-ECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCS-LQGRMTLTGIVSWGRGCALK  248 (276)
T ss_dssp             CEEEEEEEECHH-HHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEE-ETTEEEEEEEEEECSSSSBT
T ss_pred             heeeeeeEecHH-HhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEe-eCCeEEEEEEEEECCCCCCC
Confidence            445666777666 6765 221  11   1234444555789999999999998 47899999999999999864

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}

Probab=98.85  E-value=6.9e-10  Score=76.51  Aligned_cols=67  Identities=33%  Similarity=0.448  Sum_probs=47.4

Q ss_pred             CcEEEEEEeecCCCCCC-CCc---ee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG---VY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~---~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +..   ..  ..+|....-.+++|+|||||||++...+++|+|+||+|||.+|+..
T Consensus       184 l~~~~~~i~~~~-~C~~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~  256 (278)
T 2olg_A          184 KQKLAVPVVHAE-QCAKTFGAAGVRVRSSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTE  256 (278)
T ss_dssp             CEEEEEEBCCGG-GGGGGGSSTTCCCCTTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBCSTT
T ss_pred             hhcccccccCHH-HHHHHhccccccCCCceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCCCCCC
Confidence            455666777666 7865 321   11  1344432224789999999999998556789999999999999864

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*

Probab=98.84  E-value=1.3e-09  Score=75.78  Aligned_cols=67  Identities=31%  Similarity=0.698  Sum_probs=47.8

Q ss_pred             CcEEEEEEeecCCCCCC-C--Ccee--eeccc-chHHHHhhccCCCCCceeeccC-CCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T--PGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRP-DKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~--p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~-~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ .  ....  ..+|. +....+++|+|||||||++... +++|+|+||+|||.+|+..
T Consensus       155 L~~~~v~i~~~~-~C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~  228 (290)
T 1fiw_A          155 LQEARVDLIDLG-LCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARA  228 (290)
T ss_dssp             CEEEEEEEECHH-HHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBT
T ss_pred             eeEEEEEEecHH-HhccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCC
Confidence            566777787776 6864 1  1111  23443 2334468999999999999864 6899999999999999863

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*

Probab=98.83  E-value=7e-10  Score=74.72  Aligned_cols=67  Identities=36%  Similarity=0.503  Sum_probs=45.2

Q ss_pred             CcEEEEEEeecCCCCCC-CCceee--eccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVYV--QVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~t--~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.. ++...+  .+|. +....+++|++||||||++...+++|+|+||+|||.+|+..
T Consensus       149 l~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~  219 (241)
T 3ncl_A          149 LQKGEIRVINQT-TCENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQR  219 (241)
T ss_dssp             CEEEEEEECCHH-HHHHHSTTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCT
T ss_pred             eeEEeEEEECHH-HhhhhcccCCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCC
Confidence            344455555544 5654 322111  2232 23334688999999999988778899999999999999864

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}

Probab=98.81  E-value=2e-09  Score=72.34  Aligned_cols=67  Identities=25%  Similarity=0.490  Sum_probs=47.3

Q ss_pred             CcEEEEEEeecCCCCCC-C--Ccee--eecccc-hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T--PGVY--VQVNKY-LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~--p~~~--t~v~~~-~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ .  ....  ..+|.. ....+++|+|||||||++.+..++|+|+||+|||.+|+..
T Consensus       138 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~  210 (232)
T 2oq5_A          138 LRQAQVTLIDAT-TCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKP  210 (232)
T ss_dssp             CEEEEEEEECHH-HHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBT
T ss_pred             eeEeEEEEeCHH-HcCCccccCCccCCCEEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCC
Confidence            455667777766 6865 1  1111  123432 2334689999999999998667899999999999999863

>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...

Probab=98.78  E-value=1.8e-09  Score=70.53  Aligned_cols=46  Identities=33%  Similarity=0.424  Sum_probs=38.7

Q ss_pred             cccCCCCCeeEEEcCCCcEEEEEEeecCCCC-CC-CCceeeecccchHHHHhh
Q psy7307          31 AQTGDSGGPLLLQRPDKQWTIIGVVSWGIGC-GK-TPGVYVQVNKYLRWIYNT   81 (117)
Q Consensus        31 ~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C-~~-~p~~~t~v~~~~~wi~~~   81 (117)
                      .|+||||+||++.   .  .++||+||+..| .. .|++|+++..|.+||+..
T Consensus       136 ac~GDSGGPlv~~---~--~~vGI~s~g~~~~~~~~p~vyt~v~~~~~wI~~~  183 (185)
T 2qa9_E          136 AEPGDSGGPLYSG---T--RAIGLTSGGSGNCSSGGTTFFQPVTEALSAYGVS  183 (185)
T ss_dssp             CCTTCTTCEEEET---T--EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHTCE
T ss_pred             CCCCCccceEEEC---C--EEEEEEEecCCCCCCCCcEEEEEHHHHHHhhCcE
Confidence            4999999999975   3  589999998554 44 889999999999999754

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*

Probab=98.77  E-value=1.3e-09  Score=74.20  Aligned_cols=66  Identities=29%  Similarity=0.596  Sum_probs=45.8

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +....  ..+|. +....+++|+|||||||++. .+++|+|+||+|||.+|+..
T Consensus       149 L~~~~~~i~~~~-~C~~~~~~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~-~~g~~~l~GI~S~g~~C~~~  218 (250)
T 1aut_C          149 LNFIKIPVVPHN-ECSEVMSNMVSENMLCAGILGDRQDACEGDSGGPMVAS-FHGTWFLVGLVSWGEGCGLL  218 (250)
T ss_dssp             CEEEEEEEECHH-HHHHHCSSCCCTTEEEECCTTCCCBCCTTCTTCEEEEE-ETTEEEEEEEEEECSSSSCT
T ss_pred             eeEEEEEEecHH-HhhHHhccCCCCCEEEeCCCCCCCCCCCCCCchheEEE-ECCeEEEEEEEEECCCCCCC
Confidence            445666677666 6765 32211  12343 22334689999999999997 46789999999999999853

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*

Probab=98.75  E-value=3.4e-09  Score=76.14  Aligned_cols=67  Identities=28%  Similarity=0.545  Sum_probs=47.7

Q ss_pred             CcEEEEEEeecCCCCCC---CCcee--eeccc-chHHHHhhccCCCCCceeeccC---CCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK---TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRP---DKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~---~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~---~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+   +....  ..+|. +....+++|+|||||||++...   .++|+|+||+|||.+|+..
T Consensus       264 L~~~~v~ii~~~-~C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~  339 (372)
T 1z8g_A          264 LQEARVPIISND-VCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALA  339 (372)
T ss_dssp             CEEEEEEEECHH-HHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCT
T ss_pred             eeEEEEEecChH-HhCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCC
Confidence            566777788776 7864   11111  12343 3344568999999999999753   4789999999999999864

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B

Probab=98.74  E-value=1.9e-09  Score=72.42  Aligned_cols=66  Identities=30%  Similarity=0.516  Sum_probs=46.3

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee---eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY---VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~---t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ ++...   ..+|. +.....++|+|||||||++. .+++|+|+||+|||.+|+..
T Consensus       144 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~-~~~~~~l~Gi~S~g~~c~~~  214 (235)
T 4dgj_A          144 LQEADVPLLSNE-RCQQQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQ-ENNRWFLAGVTSFGYECALP  214 (235)
T ss_dssp             CEEEEEEEECHH-HHHHHCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEE-ETTEEEEEEEEEECSSSSCT
T ss_pred             heEeEeeecCHH-HhhhhccCccCCCCeEeecCCCCCCccCCCCCCCeEEEE-ECCcEEEEEEEEEcCCCCCC
Confidence            455666777665 6765 32211   12333 33444688999999999998 46799999999999999854

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2

Probab=98.74  E-value=3.8e-09  Score=71.44  Aligned_cols=66  Identities=35%  Similarity=0.532  Sum_probs=46.6

Q ss_pred             CcEEEEEEeecCCCCCC-C-Cc-ee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T-PG-VY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~-p~-~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~  113 (117)
                      ++...+.+++.. .|.+ + .. ..  ..+|......+++|+|||||||++...+++|+|+||+|||.  +|+.
T Consensus       145 L~~~~~~i~~~~-~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~  217 (241)
T 1bru_P          145 LQQGQLLVVDYA-TCSKPGWWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNY  217 (241)
T ss_dssp             CEEEEEEEECHH-HHTSTTTTGGGCCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSC
T ss_pred             ceeCEEEEecHH-HhCcccccCCcCCCceEeecCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCCC
Confidence            455666777666 6765 1 11 11  12444333346889999999999986678999999999997  8985

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A

Probab=98.74  E-value=8.8e-09  Score=69.54  Aligned_cols=66  Identities=23%  Similarity=0.377  Sum_probs=47.0

Q ss_pred             CcEEEEEEeecCCCCCC-CCce--e--eecccc-hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGV--Y--VQVNKY-LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~--~--t~v~~~-~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +...  .  ..+|.. .....++|+|||||||++.. +++|+|+||+|||.+|+..
T Consensus       135 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~Gi~S~g~~C~~~  206 (240)
T 1si5_H          135 LRVAHLYIMGNE-KCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQ-HKMRMVLGVIVPGRGCAIP  206 (240)
T ss_dssp             CEEEEEEEECGG-GTCC-------CCTTEEEEECSSSCCBCCTTCTTCEEEEEC-SSSEEEEEEECSCSCSSCT
T ss_pred             eEEEEEeecCHH-HhhhhhcCCccCCCCEEeecCCCCCCEeccCCCCCcEEEEE-CCcEEEEEEEEECCCCCCC
Confidence            566777888777 7976 3221  1  123432 22346899999999999984 7899999999999999853

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}

Probab=98.72  E-value=1.6e-09  Score=73.03  Aligned_cols=66  Identities=23%  Similarity=0.361  Sum_probs=45.0

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.. +....  ..+|. ......++|+|||||||++.. +++|+|+||+|||.+|+..
T Consensus       136 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~Gi~S~g~~C~~~  205 (234)
T 2asu_B          136 LNVALLNVISNQ-ECNIKHRGRVRESEMCTEGLLAPVGACEGDYGGPLACFT-HNSWVLEGIIIPNRVCARS  205 (234)
T ss_dssp             CEEEEEEEECHH-HHHHHTTTCCCTTEEEECCCSSCCBCCTTCTTCEEEEEE-TTEEEEEEEECCCSSSSCT
T ss_pred             ceEEEeeEEcHH-HcccccCCccCcceEeecCCCCCCeeccCCCCCceEEEE-CCeEEEEEEEEcCCCCCCC
Confidence            455566666655 6754 32111  12333 222346899999999999984 6799999999999999863

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...

Probab=98.71  E-value=8.1e-09  Score=71.64  Aligned_cols=67  Identities=30%  Similarity=0.563  Sum_probs=45.7

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-chH---HHHhhccCCCCCceeeccC-CCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YLR---WIYNTAKGDSGGPLLLQRP-DKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~~---wi~~~~~gdsg~pl~~~~~-~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++.+.+.+++.. .|.+ +....  ..+|. +..   ...++|+|||||||++... +++|+|+||+|||.+|+..
T Consensus       190 L~~~~v~i~~~~-~C~~~~~~~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~  264 (289)
T 2bdy_A          190 LQVVNLPIVERP-VCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD  264 (289)
T ss_dssp             CEEEEEEBCCHH-HHHHTCSSCCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCT
T ss_pred             ceEEEEEEECHH-HhhccccCcCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCC
Confidence            455666666655 6754 32111  12343 221   1468999999999999853 6899999999999999864

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=98.71  E-value=8.3e-09  Score=74.44  Aligned_cols=66  Identities=27%  Similarity=0.607  Sum_probs=47.2

Q ss_pred             CcEEEEEEeecCCCCCC-CCc-----eee--eccc-chHHHHhhccCCCCCceeecc-CCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG-----VYV--QVNK-YLRWIYNTAKGDSGGPLLLQR-PDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~-----~~t--~v~~-~~~wi~~~~~gdsg~pl~~~~-~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ++.+.+.+++.. .|.+ +..     ..+  .+|. +....+++|+|||||||++.. ..++|+|+||+|||.+|+.
T Consensus       301 L~~~~~~i~~~~-~C~~~~~~~~~~~~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~  376 (399)
T 1gpz_A          301 LRFVRLPVANPQ-ACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR  376 (399)
T ss_dssp             CEEEEEEEECHH-HHHC-----------CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTTT
T ss_pred             ceEEEEEEcCHH-HhhhhhhcccccCcCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcCC
Confidence            566777888776 7865 321     111  2444 334467999999999999875 3678999999999999985

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*

Probab=98.70  E-value=2.8e-09  Score=71.70  Aligned_cols=66  Identities=24%  Similarity=0.406  Sum_probs=46.3

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +....  ..+|. +....++.|++||||||++. .+++|+|+||+|||.+|+..
T Consensus       143 l~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~-~~~~~~l~GI~S~g~~C~~~  212 (235)
T 2wph_S          143 LQYLRVPLVDRA-TCLRSTKFTITNNMFCAGFHEGGRDSCQGDSGGPHVTE-VEGTSFLTGIISWGEECAMK  212 (235)
T ss_dssp             CEEEEEEEECHH-HHHHTCSSCCCTTEEEESCTTCSCBCCTTCTTCEEEEE-ETTEEEEEEEEEECSSSSCT
T ss_pred             heEeeeeeeCHH-HhcCcccCCCCCCEEEeCCCCCCCccCCCCCCCceEEe-ECCeEEEEEEEEECCCCCCC
Confidence            455667777766 6764 32111  12343 22334689999999999997 46789999999999999853

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...

Probab=98.70  E-value=4.3e-09  Score=70.98  Aligned_cols=66  Identities=30%  Similarity=0.597  Sum_probs=45.6

Q ss_pred             CcEEEEEEeecCCCCCC-C-C-cee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T-P-GVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~-p-~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.. . . ...  ..+|. ......++|+|||||||++.. +++|+|+||+|||.+|+..
T Consensus       154 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~-~~~~~l~Gi~S~g~~c~~~  225 (247)
T 3mhw_U          154 LKMTVVKLISHR-ECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWGRGCALK  225 (247)
T ss_dssp             CEEEEEEEECHH-HHTSTTTTGGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBT
T ss_pred             heeeEEEEEChH-HhcCccccCCcCCCCeEecCCCCCCCccCCCCCCCeEEEEE-CCCEEEEEEEEECCCCCCC
Confidence            455666677665 6765 1 1 111  12333 223346889999999999984 6899999999999999854

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A

Probab=98.70  E-value=4.9e-09  Score=71.13  Aligned_cols=66  Identities=27%  Similarity=0.529  Sum_probs=45.9

Q ss_pred             CcEEEEEEeecCCCCCC-C-C-cee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T-P-GVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~-p-~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ . . ...  ..+|. +....+++|+|||||||++. .+++|+|+||+|||.+|+..
T Consensus       153 L~~~~~~i~~~~-~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~-~~~~~~l~GI~S~g~~C~~~  224 (247)
T 1ddj_A          153 LKEAQLPVIENK-VCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCF-EKDKYILQGVTSWGLGCARP  224 (247)
T ss_dssp             CEEEEEEEECHH-HHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEE-CSSSEEEEEEECGGGCCBBT
T ss_pred             ceEEeeeecCHH-HhcchhccCCCCcCCeEeecCCCCCCccccCcCcCcEEEE-ECCcEEEEEEEEECCCCCCC
Confidence            455667777766 6765 1 1 111  12343 22334689999999999998 46789999999999999863

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}

Probab=98.69  E-value=1.2e-08  Score=68.69  Aligned_cols=66  Identities=27%  Similarity=0.624  Sum_probs=44.6

Q ss_pred             CcEEEEEEeecCCCCCC-CCc--ee-eeccc-chHHH--HhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG--VY-VQVNK-YLRWI--YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~--~~-t~v~~-~~~wi--~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ++...+.+++.. .|.+ +..  +. ..+|. +....  +++|+|||||||++...+++|+|+||+|||.+|+.
T Consensus       143 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~~  215 (238)
T 1ym0_A          143 LRYVTLNITTNA-FCDAVYTSDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCAS  215 (238)
T ss_dssp             CEEEEEEECCHH-HHHHHCTTSCCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSSS
T ss_pred             ceEEEEEeeCHH-HHhHhhcccccCCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCCC
Confidence            445566666555 5654 321  11 12333 21222  68899999999999866789999999999999984

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*

Probab=98.69  E-value=1.2e-08  Score=69.11  Aligned_cols=66  Identities=27%  Similarity=0.499  Sum_probs=45.9

Q ss_pred             CcEEEEEEeecCCCCCC-CC-c-ee--eecccc-hHHH------HhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TP-G-VY--VQVNKY-LRWI------YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p-~-~~--t~v~~~-~~wi------~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.. +. . ..  ..+|.. ....      +++|++||||||++.. +++|+|+||+|||.+|+..
T Consensus       153 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~-~~~~~l~Gi~S~g~~C~~~  230 (252)
T 1rtf_B          153 LKEAHVRLYPSS-RCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLN-DGRMTLVGIISWGLGCGQK  230 (252)
T ss_dssp             CEEEEEEECCGG-GSSTTTTTTCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCT
T ss_pred             heEeeeEEecHH-HhhhhhccCCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEe-CCcEEEEEEEEEcCCCCCC
Confidence            566677787776 7876 21 1 11  123432 2222      6899999999999984 6889999999999999853

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A

Probab=98.68  E-value=1.1e-08  Score=68.18  Aligned_cols=67  Identities=30%  Similarity=0.560  Sum_probs=46.6

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee---eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY---VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~---t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +...+   ..+|. +.....+.|++||||||++....++|+|+||+|||.+|+..
T Consensus       130 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~C~~~  201 (224)
T 3beu_A          130 LLKANVPFVSDA-ACRSSSSFILVANEMICAGYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARK  201 (224)
T ss_dssp             CEEEEEEEECHH-HHHHHCSSCCCGGGEEEECCSSSSCBCCTTCTTCEEEEECTTSCEEEEEEEEEESSSSCT
T ss_pred             eeEeeCcccCHH-HhhhhcCCccCCCCeEEeccCCCCCcCCCCcCCCeeEEecCCCCEEEEEEeccCCCCCCC
Confidence            455566676665 6765 32111   12333 22334688999999999998767899999999999999853

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=98.66  E-value=6.7e-09  Score=73.41  Aligned_cols=66  Identities=29%  Similarity=0.481  Sum_probs=45.4

Q ss_pred             CcEEEEEEeecCCCCCC-CCc---------ee--eecccchHHHHhhccCCCCCceeeccC-CC-cEEEEEeeeeCcccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG---------VY--VQVNKYLRWIYNTAKGDSGGPLLLQRP-DK-QWTIIGVVSWGIGCA  112 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~---------~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~-~~-~~~l~Gi~s~~~~C~  112 (117)
                      ++...+.+++.. .|.+ +..         ..  ..+|....-.+++|+|||||||++... .+ +|+|+||+|||.+|+
T Consensus       227 L~~~~v~v~~~~-~C~~~~~~~~~~~~~~~~~~~~~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C~  305 (333)
T 1elv_A          227 LKAARLPVAPLR-KCKEVKVEKPTADAEAYVFTPNMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCG  305 (333)
T ss_dssp             CEEEEEEEECHH-HHHTC----------CCCCCTTEEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTT
T ss_pred             eEEEEEEEEcHH-HhhhhhhcccccccccccCCCCeECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCCCC
Confidence            566777777766 6765 221         11  124442222578999999999999753 34 899999999999997


Q ss_pred             c
Q psy7307         113 Q  113 (117)
Q Consensus       113 ~  113 (117)
                      .
T Consensus       306 ~  306 (333)
T 1elv_A          306 T  306 (333)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B

Probab=98.66  E-value=4.4e-09  Score=66.70  Aligned_cols=62  Identities=27%  Similarity=0.421  Sum_probs=44.4

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccc-hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKY-LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~-~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+ ++...  ..+|.. ....+++|+|||||||++.+     +|+||+||| .+|+..
T Consensus        62 L~~~~~~i~~~~-~C~~~~~~~~~~~~iCa~~~~~~~~~C~GDsGgPL~~~g-----~l~Gi~S~g~~~C~~~  128 (152)
T 2pka_B           62 IQCVQLTLLQNT-FCADAHPDKVTESMLCAGYLPGGKDTCMGDSGGPLICNG-----MWQGITSWGHTPCGSA  128 (152)
T ss_dssp             CEEEEEEEECHH-HHHHHCSSBCCTTEEEEECTTSSCBCCTTCTTCEEEETT-----EEEEEECCCCSSTTCT
T ss_pred             ceEEEeEEcCHH-HhhhhhcCCCCCCEEeeccCCCCCcccCCccccceEECC-----EEEEEEecCCCCCCCC
Confidence            566778888776 7875 43222  234442 23457899999999999974     699999999 789863

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}

Probab=98.65  E-value=1.7e-08  Score=73.71  Aligned_cols=67  Identities=30%  Similarity=0.562  Sum_probs=46.6

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-ch---HHHHhhccCCCCCceeeccC-CCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YL---RWIYNTAKGDSGGPLLLQRP-DKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~---~wi~~~~~gdsg~pl~~~~~-~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++.+.+.+++.. .|.. +....  ..+|. +.   ....++|+|||||||++... +++|+|+||+|||.+|+..
T Consensus       325 L~~~~v~ii~~~-~C~~~~~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~  399 (424)
T 3nxp_A          325 LQVVNLPIVERP-VCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD  399 (424)
T ss_dssp             CEEEEEEBCCHH-HHHHTCSSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTC
T ss_pred             ceEEEeeEEcHH-HhhhhccCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCC
Confidence            566677777665 6765 22111  12343 21   12358999999999999863 7899999999999999864

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...

Probab=98.64  E-value=5e-09  Score=70.75  Aligned_cols=66  Identities=26%  Similarity=0.456  Sum_probs=44.9

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.. +....  ..+|. +.....++|+|||||||++. .+++|+|+||+|||.+|+..
T Consensus       143 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~-~~~~~~l~GI~S~g~~C~~~  212 (241)
T 2jkh_A          143 LKMLEVPYVDRN-SCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTR-FKDTYFVTGIVSWGEGCARK  212 (241)
T ss_dssp             CEEEEEEEECHH-HHHHHCSSCCCTTEEEESCSSSSCBCCTTTTTCEEEEE-ETTEEEEEEEEEECSSSSCT
T ss_pred             ccEeeeccccHH-HhcccccCcCCCCeEEeeCCCCCCccCcCcCCCeeEEE-ECCEEEEEEEEEECCCCCCC
Confidence            455666677665 6754 32111  12333 22234688999999999997 46789999999999999853

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*

Probab=98.63  E-value=7.7e-09  Score=69.83  Aligned_cols=66  Identities=35%  Similarity=0.617  Sum_probs=45.8

Q ss_pred             CcEEEEEEeecCCCCCC-CCc--ee-eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG--VY-VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~--~~-t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +..  +. ..+|. +.....++|++||||||++.. +++|+|+||+|||.+|+..
T Consensus       145 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-~~~~~l~GI~S~g~~c~~~  215 (241)
T 2any_A          145 LQKVNIPLVTNE-ECQKRYQDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKH-NGMWRLVGITSWGEGCARR  215 (241)
T ss_dssp             CEEEEEEEECHH-HHHTTSCTTCSCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCT
T ss_pred             hheeEeEEeCHH-HhhhHhccCCCCcCcEeecCCCCCCccCCCCCCCcEEEEE-CCEEEEEEEEEecCCCCCC
Confidence            455666777666 6765 321  11 12333 223346889999999999984 6899999999999999753

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B

Probab=98.62  E-value=2.4e-08  Score=67.38  Aligned_cols=67  Identities=27%  Similarity=0.444  Sum_probs=46.1

Q ss_pred             CcEEEEEEeecCCCCCC-CCc---eee--eccc-chHHHHhhccCCCCCceeecc-CCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG---VYV--QVNK-YLRWIYNTAKGDSGGPLLLQR-PDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~---~~t--~v~~-~~~wi~~~~~gdsg~pl~~~~-~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.. +..   ..+  .+|. .....+++|++||||||++.+ .+++|+|+||+|||.+|+..
T Consensus       153 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~  227 (251)
T 3gov_B          153 LMEIEIPIVDHS-TCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKK  227 (251)
T ss_dssp             CEEEEEEEECHH-HHHHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCS
T ss_pred             ceEEeeEEECHH-HhhhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCC
Confidence            455666666665 6754 221   111  2333 223346889999999999975 56899999999999999864

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*

Probab=98.62  E-value=1.7e-08  Score=68.31  Aligned_cols=35  Identities=51%  Similarity=1.031  Sum_probs=31.4

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      +++|+|||||||++.. +++|+|+||+|||.+|+..
T Consensus       187 ~~~C~GDSGgPL~~~~-~g~~~l~GI~S~g~~C~~~  221 (245)
T 2f9n_A          187 RDSCQGDSGGPLVCKV-NGTWLQAGVVSWGEGCAQP  221 (245)
T ss_dssp             SBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBT
T ss_pred             CCcCCCCCCCceEEEE-CCEEEEEEEEEeCCCCCCC
Confidence            5789999999999984 7899999999999999863

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...

Probab=98.61  E-value=3e-08  Score=67.19  Aligned_cols=36  Identities=42%  Similarity=1.087  Sum_probs=32.0

Q ss_pred             HhhccCCCCCceeeccC-CCcEEEEEeeeeCcccccc
Q psy7307          79 YNTAKGDSGGPLLLQRP-DKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~-~~~~~l~Gi~s~~~~C~~~  114 (117)
                      .++|+|||||||++... +++|+|+||+|||.+|+..
T Consensus       198 ~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~  234 (259)
T 3rm2_H          198 GDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD  234 (259)
T ss_dssp             CBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCT
T ss_pred             CcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCC
Confidence            47999999999999864 7899999999999999864

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...

Probab=98.60  E-value=2e-08  Score=67.71  Aligned_cols=66  Identities=36%  Similarity=0.627  Sum_probs=44.5

Q ss_pred             CcEEEEEEeecCCCCCC-CCce-e--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGV-Y--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~-~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +... .  ..+|. +....+++|+|||||||++.. +++|+|+||+|||.+|+..
T Consensus       145 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~C~~~  215 (238)
T 3bg8_A          145 LQKAKIPLVTNE-ECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQR  215 (238)
T ss_dssp             CEEEECCEECHH-HHHHHCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCT
T ss_pred             hcEeeEEEECHH-HhhhhhcCCCCCCCeEeecCCCCCCCcCCCCCCcceEEEE-CCeEEEEEEEEECCCCCCC
Confidence            444555566655 6754 3211 1  12333 223346899999999999984 6899999999999999853

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2

Probab=98.59  E-value=2.9e-08  Score=66.87  Aligned_cols=36  Identities=39%  Similarity=0.966  Sum_probs=31.8

Q ss_pred             HHhhccCCCCCceeecc-CCCcEEEEEeeeeCccccc
Q psy7307          78 IYNTAKGDSGGPLLLQR-PDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~-~~~~~~l~Gi~s~~~~C~~  113 (117)
                      .+++|+|||||||++.+ ..++|+|+||+|||.+|+.
T Consensus       183 ~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~  219 (242)
T 2qy0_B          183 KQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR  219 (242)
T ss_dssp             CCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSS
T ss_pred             CCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCC
Confidence            46899999999999963 5789999999999999985

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2

Probab=98.56  E-value=2.8e-08  Score=66.93  Aligned_cols=66  Identities=29%  Similarity=0.436  Sum_probs=44.9

Q ss_pred             CcEEEEEEeecCCCCCC-CC--cee-eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TP--GVY-VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p--~~~-t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +.  .+. ..+|. +....+++|+|||||||++. .+++|+|+||+|||.+|+.+
T Consensus       146 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~-~~~~~~l~Gi~S~g~~C~~~  216 (237)
T 2f91_A          146 LQKVTVPLVSDE-DCRADYGADEILDSMICAGVPEGGKDSCQGDSGGPLAAS-DTGSTYLAGIVSWGYGCARP  216 (237)
T ss_dssp             CEEEEEEEECHH-HHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEEEC-TTSSCEEEEEEEEESSSSCT
T ss_pred             eeEEEEeEcCHH-HhhhhhCCCCcCCCeEEEecCCCCCCCCCCcCCCCeEEe-cCCCEEEEEEEEecCCCCCC
Confidence            455566666655 5654 21  111 12333 22334689999999999997 57899999999999999863

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=98.56  E-value=1.1e-08  Score=73.95  Aligned_cols=67  Identities=24%  Similarity=0.480  Sum_probs=46.2

Q ss_pred             CcEEEEEEeecCCCCCC-CCc------ee--eeccc-chHHHHhhccCCCCCceeecc-CCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG------VY--VQVNK-YLRWIYNTAKGDSGGPLLLQR-PDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~------~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~-~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++.+.+.+++.. .|.+ +..      ..  ..+|. +....+++|+|||||||++.+ .+++|+|+||+||| .+|+..
T Consensus       302 L~~~~v~v~~~~-~C~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~  380 (403)
T 1zjk_A          302 LMYVDIPIVDHQ-KCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEA  380 (403)
T ss_dssp             CEEEEEEEECHH-HHHHHTTSSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--C
T ss_pred             cEEEEEeEeCHH-HHhhhhhccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCC
Confidence            566777787766 6765 321      11  12343 333357899999999999975 46799999999999 789864

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A

Probab=98.55  E-value=4e-08  Score=67.88  Aligned_cols=66  Identities=26%  Similarity=0.537  Sum_probs=44.7

Q ss_pred             CcEEEEEEeecCCCCCC-C-Cc-ee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T-PG-VY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~-p~-~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ . .. ..  ..+|. +.....++|+|||||||++.. +++|+|+||+|||.+|+..
T Consensus       182 L~~~~v~i~~~~-~C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~-~g~~~l~GIvS~g~~C~~~  253 (283)
T 1yc0_A          182 LREALVPLVADH-KCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEK-NGVAYLYGIISWGDGCGRL  253 (283)
T ss_dssp             CEEEEEEBCCHH-HHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSTTTCT
T ss_pred             heEeEEEEECHH-HhcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEE-CCcEEEEEEEEECCCCCCC
Confidence            455566666655 6764 1 11 11  12333 222346899999999999984 7899999999999999853

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=98.54  E-value=3.7e-08  Score=69.66  Aligned_cols=66  Identities=26%  Similarity=0.559  Sum_probs=44.8

Q ss_pred             CcEEEEEEeecCCCCCC-CC-----cee--eecccc-hHHHHhhccCCCCCceeecc-CCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TP-----GVY--VQVNKY-LRWIYNTAKGDSGGPLLLQR-PDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p-----~~~--t~v~~~-~~wi~~~~~gdsg~pl~~~~-~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ++...+.+++.. .|.+ +.     ...  ..+|.. ....+++|+|||||||++.+ ..++|+|+||+|||.+|+.
T Consensus       233 L~~~~v~i~~~~-~C~~~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~~  308 (329)
T 1md8_A          233 LRFVRLPVANPQ-ACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR  308 (329)
T ss_dssp             CEEEEEEBCCHH-HHHHHHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSSS
T ss_pred             ceEEEEEEcCHH-HHHHHhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcCC
Confidence            455666666655 6753 11     111  123432 22356899999999999963 5689999999999999985

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...

Probab=98.54  E-value=4.2e-08  Score=66.48  Aligned_cols=64  Identities=28%  Similarity=0.488  Sum_probs=42.5

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ++...+.+++.. .|.+ +....  ..+|.. .-.+++|+|||||||++.. +++|+|+||+|||.+|+.
T Consensus       155 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~-~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~c~~  221 (245)
T 1t8o_A          155 LQQASLPLLSNT-NCKKYWGTKIKDAMICAG-ASGVSSCMGDSGGPLVCKK-NGAWTLVGIVSWGSSTCS  221 (245)
T ss_dssp             CEEEEEEEECHH-HHHHHHGGGCCTTEEEEE-CSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCTTCC
T ss_pred             heEEEEeeEcch-hhhHhhcCcCCCceEEcc-CCCCccCcccCcCCEEEEE-CCEEEEEEEEEeCCCCCC
Confidence            444555566554 5654 21111  123332 2235789999999999985 789999999999998875

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}

Probab=98.53  E-value=1.5e-08  Score=73.37  Aligned_cols=67  Identities=25%  Similarity=0.425  Sum_probs=44.7

Q ss_pred             CcEEEEEEeecCCCCCC-CCc-------ee--eecccchHHHHhhccCCCCCceeecc--CCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG-------VY--VQVNKYLRWIYNTAKGDSGGPLLLQR--PDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~-------~~--t~v~~~~~wi~~~~~gdsg~pl~~~~--~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++.+.+.+++.. .|.+ +..       ..  ..+|....-.+++|+|||||||++..  ..++|+|+||+|||.+|+..
T Consensus       284 L~~~~v~iv~~~-~C~~~~~~~~~~~~~~i~~~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~  362 (394)
T 2b9l_A          284 LKKIQLPTVDRD-KCQADLRNTRLGLKFVLDQTFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDE  362 (394)
T ss_dssp             CEEEEECEECHH-HHHHHHHTTTTCTTCCCCTTEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBS
T ss_pred             ceEEEEEEECHH-HHHHHHhhcccccceecCCCEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCC
Confidence            455666666665 5653 110       01  12444322346899999999999963  34689999999999999864

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*

Probab=98.53  E-value=4.8e-08  Score=66.11  Aligned_cols=66  Identities=26%  Similarity=0.537  Sum_probs=44.2

Q ss_pred             CcEEEEEEeecCCCCCC-C-Cc-ee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T-PG-VY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~-p~-~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.. . .. ..  ..+|. +.....++|+|||||||++.. +++|+|+||+|||.+|+..
T Consensus       147 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-~g~~~l~GI~S~g~~C~~~  218 (248)
T 2r0l_A          147 LREALVPLVADH-KCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEK-NGVAYLYGIISWGDGCGRL  218 (248)
T ss_dssp             CEEEEEEBCCHH-HHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSTTTCT
T ss_pred             heEEEEeeeCHH-HhCCccccCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEE-CCcEEEEEEEEeCCCCCCC
Confidence            445556666555 6764 1 11 11  12333 222346889999999999984 7899999999999999853

>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*

Probab=98.53  E-value=3.7e-08  Score=68.07  Aligned_cols=53  Identities=19%  Similarity=0.337  Sum_probs=38.7

Q ss_pred             ceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC----CCceeeecccchH
Q psy7307          20 DYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK----TPGVYVQVNKYLR   76 (117)
Q Consensus        20 ~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~----~p~~~t~v~~~~~   76 (117)
                      .+|+... +..++|.||||+||++.  .  +.++||+||+. .|..    +|++|+++..|..
T Consensus       177 ~iCag~~~~~gdtC~gdsGgPl~~~--~--~~~~Gi~s~g~~~C~~~~~~~p~vyt~v~~~~~  235 (268)
T 1arb_A          177 HLNVQWQPSGGVTEPGSSGSPIYSP--E--KRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWT  235 (268)
T ss_dssp             EEEEECCTTSCCCCTTCTTCEEECT--T--SCEEEEEEECSCCTTCCGGGSEEEEEEHHHHHH
T ss_pred             eEEEeeecCCCCCccCcccCCcEee--C--CEEEEEEeecCcccCCCCCCCCceEEEeeeeec
Confidence            4555322 13379999999999863  2  34999999995 6874    6899999887654

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}

Probab=98.52  E-value=4.1e-08  Score=74.09  Aligned_cols=65  Identities=31%  Similarity=0.555  Sum_probs=32.3

Q ss_pred             CcEEEEEEeecCCCCCC-CCceee---eccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVYV---QVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~t---~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      +++..+.+++   .|.+ +...++   .++. +....+++|+|||||||++...+++|+|+||+|||.+|+.+
T Consensus       466 L~~~~v~i~~---~C~~~~~~~~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~  535 (565)
T 2xrc_A          466 LQWGEVKLIS---NCSKFYGNRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKP  535 (565)
T ss_dssp             -CEEEEEECS---CTHHHHTTSCCTTTEEEEEEC----------CCCEEEEECTTCCEEEEEEECC------C
T ss_pred             eeEEeeeehH---HhHHhhccCcCCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCCCCCC
Confidence            4556666654   4765 322221   2333 33445789999999999998767899999999999999864

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*

Probab=98.51  E-value=4.4e-08  Score=66.58  Aligned_cols=38  Identities=37%  Similarity=0.739  Sum_probs=32.7

Q ss_pred             HHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          76 RWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        76 ~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ...++.|+|||||||++.. +++|+|+||+|||.+|+..
T Consensus       184 ~~~~~~C~GDsGgPl~~~~-~~~~~lvGI~S~g~~c~~~  221 (261)
T 3gyl_B          184 EGGKDACQGDSGGPLSCPV-EGLWYLTGIVSWGDACGAR  221 (261)
T ss_dssp             SSSCBCCTTTTTCEEEEEE-TTEEEEEEEECCCCCSSCT
T ss_pred             CCCCccCCCCCCCeeEEEe-CCEEEEEEEEecCCCCCCC
Confidence            3446889999999999974 6899999999999999854

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...

Probab=98.51  E-value=4.1e-08  Score=66.71  Aligned_cols=66  Identities=29%  Similarity=0.460  Sum_probs=45.2

Q ss_pred             CcEEEEEEeecCCCCCC-CCc-----ee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG-----VY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~-----~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +..     ..  ..+|. +....+++|+|||||||++. .+++|+|+||+|||.+|+..
T Consensus       145 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~-~~g~~~l~GI~S~g~~C~~~  219 (254)
T 2bz6_H          145 LMVLNVPRLMTQ-DCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATH-YRGTWYLTGIVSWGQGCATV  219 (254)
T ss_dssp             CEEEEEEEECHH-HHHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEE-ETTEEEEEEEEEECSSSSCT
T ss_pred             heeeeeeeecHH-HHhhhhhccccCCccCCCEEeecCCCCCCccccccCCCceEEe-ECCEEEEEEEEEECCCCCCC
Confidence            455666677665 6754 211     11  12333 22334689999999999997 46789999999999999853

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2

Probab=98.50  E-value=3.3e-08  Score=66.50  Aligned_cols=61  Identities=26%  Similarity=0.394  Sum_probs=43.1

Q ss_pred             CcEEEEEEeecCCCCCC-CCceee--eccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc-cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVYV--QVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~t--~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~  113 (117)
                      ++...+.+++.. .|.+ ++...+  .+|. ......++|+|||||||++.+     +|+||+|||. +|+.
T Consensus       147 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~~C~~  212 (237)
T 1gvz_A          147 LQCVELRLQSNE-KCARAYPEKMTEFVLCATHRDDSGSICLGDSGGALICDG-----VFQGITSWGYSECAD  212 (237)
T ss_dssp             EEEEEEEEECGG-GGCSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEEETT-----EEEEEECCCSSSCEE
T ss_pred             cEEEEEeEeChh-HhhhhhhhcCCCceEEEeeCCCCCccCCCCccCcEeeCC-----EEEEEEEeCCCCCCC
Confidence            455677777777 7987 433221  2333 223446789999999999964     7899999998 8985

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*

Probab=98.49  E-value=6.5e-08  Score=64.92  Aligned_cols=39  Identities=33%  Similarity=0.808  Sum_probs=33.0

Q ss_pred             HHHHhhccCCCCCceeecc-CCCcEEEEEeeeeC-cccccc
Q psy7307          76 RWIYNTAKGDSGGPLLLQR-PDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        76 ~wi~~~~~gdsg~pl~~~~-~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ...+++|+|||||||++.+ .+++|+|+||+||| .+|+..
T Consensus       179 ~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~  219 (242)
T 3tvj_B          179 SGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEA  219 (242)
T ss_dssp             TCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCT
T ss_pred             CCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCC
Confidence            3347889999999999975 56889999999999 789864

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}

Probab=98.46  E-value=2.8e-08  Score=72.32  Aligned_cols=66  Identities=26%  Similarity=0.354  Sum_probs=44.7

Q ss_pred             CcEEEEEEeecCCCCCC-CCce--eeecccchHHHHhhccCCCCCce------eeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGV--YVQVNKYLRWIYNTAKGDSGGPL------LLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~--~t~v~~~~~wi~~~~~gdsg~pl------~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++.+.+.+++.. .|.+ +...  ...+|....-.+++|+|||||||      ++. .+++|+|+||+||| .+|+..
T Consensus       277 L~~~~v~iv~~~-~C~~~~~~~~~~~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~-~~~~~~l~GIvS~G~~~Cg~~  352 (408)
T 2xxl_A          277 LLQANVPLQPRS-ACSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGE-YAPKMVEFGIVSQGVVTCGQI  352 (408)
T ss_dssp             CEEEEEEEECHH-HHHHHHTSCCCTTEEEECCSCSSSGGGSCTTCEEEEEECCTTC-SSCEEEEEEEEEECCCCTTSC
T ss_pred             heEeeeeecCHH-HHHHHhcccCCCceEeecCCCCCccCCCcccChhhcCccceEE-ECCEEEEEEEEEECCCCCCCC
Confidence            455667777766 6765 2211  12344322224689999999999      544 35689999999999 689864

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A

Probab=98.45  E-value=4.2e-08  Score=76.59  Aligned_cols=66  Identities=29%  Similarity=0.528  Sum_probs=47.3

Q ss_pred             CcEEEEEEeecCCCCCC--CC-cee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK--TP-GVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~--~p-~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++.+.+.|++.. .|.+  +. ...  ..++. +.....++|+|||||||++.. .++|+|+||+|||.+|+..
T Consensus       697 L~~~~v~ii~~~-~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSGGPLv~~~-~~~~~LvGIvS~G~gC~~~  768 (791)
T 4dur_A          697 LKEAQLPVIENK-VCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFE-KDKYILQGVTSWGLGCARP  768 (791)
T ss_dssp             CEEEEEEEECHH-HHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEEE-TTEEEEEEECCTTTCCBBT
T ss_pred             eEEEEEEEeCHH-HhhcccccCCCCCCCeEEeccCCCCCCCCCCCcccceEEEe-CCeEEEEEEEEeCCCCCCC
Confidence            566777787766 6765  11 111  12333 334457899999999999984 6789999999999999864

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C

Probab=98.45  E-value=1.2e-07  Score=63.80  Aligned_cols=65  Identities=29%  Similarity=0.479  Sum_probs=45.1

Q ss_pred             CcEEEEEEeecCCCCCC-C-Cce-e--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T-PGV-Y--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~-p~~-~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~  113 (117)
                      ++...+.+++.. .|.+ + ... .  ..+|..... ++.|++||||||++...+++|+|+||+||+.  +|+.
T Consensus       145 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~~Ca~~~~-~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~  216 (240)
T 1fon_A          145 LQQALLPTVDYE-HCSQWDWWGITVKKTMVCAGGDT-RSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNT  216 (240)
T ss_dssp             CEEEECCEECHH-HHTSTTTTGGGCCTTEEEECCSS-SCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSB
T ss_pred             heEEEEeeeCHH-HhccceecCCccccceEeecCCC-CcccCCCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCC
Confidence            455566666665 6765 1 111 1  124443232 7889999999999986578999999999996  7985

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2

Probab=98.45  E-value=2.4e-08  Score=66.92  Aligned_cols=62  Identities=37%  Similarity=0.568  Sum_probs=40.1

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ ++...  ..+|. +....++.|+|||||||++.+     +|+||+|||.+|+..
T Consensus       139 l~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~C~~~  204 (228)
T 1fxy_A          139 LQCLDAPVLSQA-KCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNG-----QLQGVVSWGDGCAQK  204 (228)
T ss_dssp             CEEEEEEBCCHH-HHHHHSTTTCCTTEEEESCTTCSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSBT
T ss_pred             ceEEEEEEeCHH-HhHhhcCCCCCCCEEEeccCCCCCccccCccccceEECC-----EEEEEEEECCCCCCC
Confidence            344555555554 5654 32211  12332 223346899999999999975     799999999999853

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A

Probab=98.44  E-value=2.7e-08  Score=66.51  Aligned_cols=61  Identities=38%  Similarity=0.736  Sum_probs=39.9

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ++...+.+++.. .|.+ ++...  ..+|. +....+++|+|||||||++.+     +|+||+|||.+|+.
T Consensus       134 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~C~~  198 (222)
T 1hj8_A          134 LQCLNIPILSYS-DCNNSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCNG-----ELQGVVSWGYGCAE  198 (222)
T ss_dssp             CEEEEEEBCCHH-HHHHHSTTCCCTTEEEESCTTSSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSC
T ss_pred             eEEEEEEEcCHH-HhhhhccCCCCCCeEEeccCCCCCccCCCCcccceEECC-----EEEEEEeecCCCCC
Confidence            344555555554 5654 33211  12333 223346889999999999964     79999999999986

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2

Probab=98.44  E-value=3.5e-08  Score=65.87  Aligned_cols=62  Identities=29%  Similarity=0.362  Sum_probs=41.4

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee-eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY-VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~-t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ ...+. ..+|......+++|+|||||||++++     +|+||+|||.+|+..
T Consensus       138 L~~~~~~~~~~~-~C~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~C~~~  201 (222)
T 1eq9_A          138 LQEIELIVHPQK-QCERDQWRVIDSHICTLTKRGEGACHGDSGGPLVANG-----AQIGIVSFGSPCALG  201 (222)
T ss_dssp             CEEEEEEEECHH-HHHHHSSSCCTTEEEECCCTTCBCCTTCTTCEEEETT-----EEEEEEEECSTTTSS
T ss_pred             heEeEEEEeCHH-HhCcccCCCCccEEeecCCCCCeeeeCCccceEEECC-----EEEEEEEECCCcCCC
Confidence            455566666655 6762 21111 22344333346799999999999964     799999999999863

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=98.43  E-value=2.9e-08  Score=66.40  Aligned_cols=62  Identities=34%  Similarity=0.594  Sum_probs=40.2

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ ++...  ..+|. +....+++|++||||||++.+     +|+||+|||.+|+..
T Consensus       135 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~C~~~  200 (223)
T 3mfj_A          135 LKCLKAPILSDS-SCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSG-----KLQGIVSWGSGCAQK  200 (223)
T ss_dssp             CEEEEEEBCCHH-HHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSBT
T ss_pred             heEEEEEEeCHH-HhhhhhcCcCCCCEEEccCCCCCCCcCCCCcccceEECC-----EEEEEEEECCCCCCC
Confidence            444555555554 5654 32211  12333 223346889999999999964     699999999999853

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}

Probab=98.43  E-value=4.6e-08  Score=65.82  Aligned_cols=62  Identities=29%  Similarity=0.451  Sum_probs=42.1

Q ss_pred             CcEEEEEEeecCCCCCC-CCceee--eccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVYV--QVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~t--~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +....+  .+|. .....+++|+|||||||++.+     +|+||+||| .+|+..
T Consensus       148 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~  214 (238)
T 1spj_A          148 LQCVDLKILPND-ECKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMCDG-----VLQGVTSWGYVPCGTP  214 (238)
T ss_dssp             CEEEEEEEECHH-HHHHHCSSCCCTTEEEEECTTCSSBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCT
T ss_pred             ccEEEEeecCHH-HhhhhccCCCCCCeEEeeCCCCCCCCCCCCCCCcEEEcC-----EEEEEEEeCCCCCCCC
Confidence            455666677665 6765 322111  2333 223357899999999999974     899999999 689863

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}

Probab=98.42  E-value=2.6e-07  Score=61.87  Aligned_cols=62  Identities=32%  Similarity=0.523  Sum_probs=44.4

Q ss_pred             CcEEEEEEeecCCCCCC-CCc---ee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcc-cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG---VY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~---~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~~~  114 (117)
                      ++...+.+++.. .|.+ ++.   ..  ..+|. +....+++|+|||||||++.+     .|+||+|||.+ |+..
T Consensus       139 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~  208 (238)
T 4e7n_A          139 PHCVNINLLEYE-MCRAPYPEFELPATSRTLCAGILEGGKDTCKGDSGGPLICNG-----QFQGIASWGDDPCAQP  208 (238)
T ss_dssp             CEEEEEEEECGG-GGTTTCGGGCCCSCCSEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCT
T ss_pred             ceEeeccccCHH-HHhhhcccccCCCCCCeEEeCCCCCCCccCCCCCCcceEECC-----EEEEEEEEeCCCCCCC
Confidence            566777788777 7886 432   11  12333 334457899999999999975     69999999986 8863

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=98.42  E-value=1.2e-07  Score=72.29  Aligned_cols=66  Identities=36%  Similarity=0.619  Sum_probs=36.6

Q ss_pred             CcEEEEEEeecCCCCCC-CCce-e--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGV-Y--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~-~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++.+.+.+++.. .|.+ +... .  ..++. +....+++|+|||||||++. .+++|+|+||+|||.+|+..
T Consensus       532 L~~~~v~i~~~~-~C~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~-~~~~~~lvGIvS~G~~C~~~  602 (625)
T 2f83_A          532 LQKAKIPLVTNE-ECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCK-HNEVWHLVGITSWGEGCAQR  602 (625)
T ss_dssp             CBCCEECCCCHH-HHHTTCTTSCCCTTBCCC----------CCCTTCEEEEE-ETTEEEEEEEEEECCC----
T ss_pred             cEEEEEEEcCHH-HHHHHhccCCCCCCeEEeecCCCCCcCCCCCcccceEEE-ECCeEEEEEEEEeCCCCCCC
Confidence            344555566555 5755 3221 1  12333 33445789999999999998 46799999999999999853

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2

Probab=98.42  E-value=9.7e-08  Score=64.13  Aligned_cols=62  Identities=29%  Similarity=0.345  Sum_probs=43.1

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccc-hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKY-LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~-~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +....  ..+|.. ....+++|+|||||||++++     +|+||+||| .+|+..
T Consensus       145 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~  211 (235)
T 1ton_A          145 LQCVNIHLLSNE-KCIETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLICDG-----VLQGITSGGATPCAKP  211 (235)
T ss_dssp             CEEEEEEEECGG-GCGGGGSTTGGGGEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEECCCCSSCSCT
T ss_pred             ceEEEEEEeCHH-HHHHHhcCcCCCCeEeeccCCCCCcCCCCCCccccEECC-----EEEEEEeeCCCCCCCC
Confidence            566677777776 7876 33211  123432 23346899999999999964     799999999 579863

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2

Probab=98.41  E-value=1.1e-07  Score=64.53  Aligned_cols=64  Identities=33%  Similarity=0.523  Sum_probs=42.9

Q ss_pred             cEEEEEEeecCCCCCC-C-C-cee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--cccc
Q psy7307          48 QWTIIGVVSWGIGCGK-T-P-GVY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQ  113 (117)
Q Consensus        48 ~~~~vgI~s~~~~C~~-~-p-~~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~  113 (117)
                      +...+.+++.. .|.+ + . ...  ..+|.......++|+|||||||++.. +++|+|+||+|||.  +|+.
T Consensus       158 ~~~~~~~~~~~-~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~-~~~~~l~GI~S~g~~~~C~~  228 (251)
T 1pyt_D          158 QQGLQPVVDYA-TCSQRDWWGTTVKETMVCAGGDGVISACNGDSGGPLNCQA-DGQWDVRGIVSFGSGLSCNT  228 (251)
T ss_dssp             BCCEEECBCHH-HHTSTTTTTTTCCTTEEEECCSCSSCCCCSCTTCEEEEES-SSSEEEEEEEEECCSSCTTB
T ss_pred             heeEeEeeCHH-HcchhhccCCCcCCCeEEecCCCCCccCCCCCCCceEEEE-CCCEEEEEEEEECCCCCCCC
Confidence            33455565555 5654 2 1 111  22444333346899999999999984 78899999999996  7975

>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=98.41  E-value=3.6e-08  Score=65.66  Aligned_cols=62  Identities=34%  Similarity=0.605  Sum_probs=40.7

Q ss_pred             CcEEEEEEeecCCCCCC-CCceee--eccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVYV--QVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~t--~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.. ++...+  .+|. +....++.|+|||||||++.+     +|+||+|||.+|+..
T Consensus       135 l~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~  200 (223)
T 4i8h_A          135 LKCLKAPILSDS-SCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSG-----KLQGIVSWGSGCAQK  200 (223)
T ss_dssp             CEEEEEEBCCHH-HHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSCT
T ss_pred             ceEEEeeecCHH-HHHHhhCCCCCCCeEeccCCCCCCccCCCCCCCcEEECC-----EEEEEEEcCCCCCCC
Confidence            344455555544 5654 322111  2332 334457889999999999975     799999999999854

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*

Probab=98.41  E-value=3.2e-08  Score=66.27  Aligned_cols=62  Identities=31%  Similarity=0.475  Sum_probs=40.1

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+ ++...  ..+|......+++|+|||||||++.+     +|+||+||| .+|+..
T Consensus       138 L~~~~~~i~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~  203 (227)
T 2psx_A          138 LQCLNISVLSQK-RCEDAYPRQIDDTMFCAGDKAGRDSCQGDSGGPVVCNG-----SLQGLVSWGDYPCARP  203 (227)
T ss_dssp             CEEEEEEBCCHH-HHHHHSTTTCCTTEEEECCSTTCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCT
T ss_pred             heEEEEEecCHh-HhhhhcCCCCCCCEEcccCCCCCccCCCCCCcceeeCC-----EEEEEEeecCCCCCCC
Confidence            344455555544 5654 32211  12343323346899999999999975     799999999 689863

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...

Probab=98.41  E-value=1e-07  Score=64.27  Aligned_cols=65  Identities=28%  Similarity=0.377  Sum_probs=43.7

Q ss_pred             CcEEEEEEeecCCCCCC-C-Cce-e--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T-PGV-Y--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~-p~~-~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~  113 (117)
                      ++...+.+++.. .|.+ . ... .  ..+|......+++|+|||||||++.. +++|+|+||+|||.  +|+.
T Consensus       145 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~-~g~~~l~Gi~S~g~~~~C~~  216 (240)
T 1gvk_B          145 LQQAYLPTVDYA-ICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNV  216 (240)
T ss_dssp             CEEEECCEECHH-HHTSTTTTGGGCCTTEEEECCSSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECBTTBSSC
T ss_pred             ccEEEEEEEcHH-HhccccccCccCCcceEeecCCCCCcccCCCCcCceEEEE-CCcEEEEEEEEEeCCCCCCC
Confidence            444555566555 5764 1 111 1  12444333346889999999999974 67899999999995  8985

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*

Probab=98.40  E-value=5.2e-08  Score=65.54  Aligned_cols=62  Identities=26%  Similarity=0.398  Sum_probs=42.3

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccc-hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKY-LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~-~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +....  ..+|.. ....+++|+|||||||++++     +|+||+||| .+|+.+
T Consensus       147 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~  213 (237)
T 1ao5_A          147 LQCVFITLLPNE-NCAKVYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLICDG-----ILQGTTSYGPVPCGKP  213 (237)
T ss_dssp             CEEEEEEEECHH-HHHHHCSSCCCTTEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCT
T ss_pred             ccEEEEEecChh-HhhhhhcccCCCCEEEEccCCCCCCCCCCCCcceEEECC-----EEeEEEeEcCCCCCCC
Confidence            455666677665 6765 33222  124432 23346899999999999964     799999999 689864

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A

Probab=98.40  E-value=7.9e-08  Score=64.77  Aligned_cols=62  Identities=26%  Similarity=0.342  Sum_probs=42.9

Q ss_pred             CcEEEEEEeecCCCCC--C-CCc--ee--eecccc-hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCG--K-TPG--VY--VQVNKY-LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~--~-~p~--~~--t~v~~~-~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.  . +..  ..  ..+|.. ....+++|+|||||||++++     +|+||+|||.+|+..
T Consensus       144 L~~~~~~i~~~~-~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~~~-----~l~Gi~S~g~~C~~~  213 (240)
T 1mza_A          144 LREVTVTVLSRK-LCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICKG-----VFHAIVSGGHECGVA  213 (240)
T ss_dssp             CEEEEEEECCHH-HHTSTTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEETT-----EEEEEECSSCCSSCT
T ss_pred             ceEeEEEEeCHH-HcCCcceeCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEECC-----EEEEEEEECCCCCCC
Confidence            556677777766 686  3 322  11  124432 23346899999999999964     799999999999863

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2

Probab=98.40  E-value=2.7e-07  Score=61.39  Aligned_cols=62  Identities=26%  Similarity=0.249  Sum_probs=43.6

Q ss_pred             CcEEEEEEeecCCCCCC-C-Cceeeeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T-PGVYVQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~-p~~~t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ . ...-..+|. ......+.|+|||||||++..     +|+||+|||.+|+..
T Consensus       141 l~~~~~~~~~~~-~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~  205 (224)
T 3rp2_A          141 LREVELRIMDEK-ACVDYRYYEYKFQVCVGSPTTLRAAFMGDSGGPLLCAG-----VAHGIVSYGHPDAKP  205 (224)
T ss_dssp             CEEEEEEEECGG-GTTTTTCCCTTTEEEECCTTSCCBCCTTTTTCEEEETT-----EEEEEEEECCTTCCS
T ss_pred             eeEeeeeecChH-HhccccccCcCCEEEecCCCCCCeeccCCCCCeEEEcc-----eeeEEEEECCCCCCC
Confidence            566778888777 7874 1 111112332 333447899999999999975     899999999988754

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A

Probab=98.39  E-value=2.6e-07  Score=61.57  Aligned_cols=62  Identities=29%  Similarity=0.322  Sum_probs=43.2

Q ss_pred             CcEEEEEEeecCCCCCC--CCceeeeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK--TPGVYVQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~--~p~~~t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|..  ....-..+|. .....++.|+|||||||++..     +|+||+|||.+|+..
T Consensus       141 L~~~~~~~~~~~-~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~  205 (226)
T 4ag1_A          141 LQEVKLRLMDPQ-ACSHFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAG-----VAQGIVSYGRSDAKP  205 (226)
T ss_dssp             CEEEEEEEECGG-GGTTSTTCCTTTEEEESCTTSCCBCCTTCTTCEEEETT-----EEEEEEEECBTTCCS
T ss_pred             eEEEEEEEcChH-HcccccCcCccceEeeccCCCCCcCccCCCCCceEEcC-----EEEEEEEECCCCCCC
Confidence            566777787776 7874  1111112333 223457899999999999965     899999999988764

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*

Probab=98.38  E-value=4.4e-07  Score=60.71  Aligned_cols=62  Identities=32%  Similarity=0.412  Sum_probs=44.7

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee---eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcc-cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY---VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~---t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~~~  114 (117)
                      ++...+.+++.. .|.+ ++...   ..+|. +....+++|+|||||||++.+     .|+||+|||.+ |+..
T Consensus       137 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~-----~l~Gi~S~g~~~C~~~  204 (234)
T 3s9c_A          137 PHCTNIFIVKHK-WCEPLYPWVPADSRTLCAGILKGGRDTCHGDSGGPLICNG-----EMHGIVAGGSEPCGQH  204 (234)
T ss_dssp             CEEEEEEEECGG-GTTTTCTTSCTTSSEEEEECTTSSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCT
T ss_pred             ccccceEecCHH-HhhhcccCCCCCcceEEeecCCCCCccCCCCCCCeEEEeC-----CcEEEEEEeCCCCCCC
Confidence            566777788776 7876 43211   12343 344467899999999999975     69999999976 9864

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*

Probab=98.37  E-value=4.8e-08  Score=65.70  Aligned_cols=62  Identities=31%  Similarity=0.455  Sum_probs=41.3

Q ss_pred             CcEEEEEEeecCCCCCC-CCceee--eccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc-ccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVYV--QVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~t--~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~~  114 (117)
                      ++...+.+++.. .|.+ ++...+  .+|. +....+++|+|||||||++.+     +|+||+|||. +|+..
T Consensus       147 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~  213 (237)
T 2zch_P          147 LQCVDLHVISND-VCAQVHPQKVTKFMLCAGRWTGGKSTCSGDSGGPLVCNG-----VLQGITSWGSEPCALP  213 (237)
T ss_dssp             CEEEEEEEECHH-HHHHHCSSBCCTTEEEEECTTCSCBCCTTCTTCEEESSS-----SEEEEEEECCSSTTCT
T ss_pred             cEEeEEEEeCHH-HhcccccCCCCceEEeecCCCCCCcccCCCccCeEEECC-----EEEEEEEeCcCCCCCC
Confidence            455566666665 6754 332211  2333 223346899999999999974     7999999998 79853

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*

Probab=98.37  E-value=7.5e-08  Score=64.38  Aligned_cols=62  Identities=34%  Similarity=0.589  Sum_probs=41.8

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+ ++...  ..+|. .....+++|++||||||++.+     +|+||+||| .+|+..
T Consensus       134 l~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~-----~l~Gi~S~g~~~C~~~  200 (223)
T 1lo6_A          134 IQCAYIHLVSRE-ECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCGD-----HLRGLVSWGNIPCGSK  200 (223)
T ss_dssp             CEEEEEEEECHH-HHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTCEEEETT-----EEEEEEEECCSSCCCS
T ss_pred             eeEEEEEEeCHH-HhhhhhCCCCCCCeEEeecCCCCCeeccccCCCcEEeCC-----EEEEEEeeCCCCCCCC
Confidence            455566677665 6765 33221  12333 223346899999999999964     799999999 689853

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*

Probab=98.36  E-value=8.7e-08  Score=70.94  Aligned_cols=41  Identities=32%  Similarity=0.620  Sum_probs=33.5

Q ss_pred             cccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--ccc
Q psy7307          71 VNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCA  112 (117)
Q Consensus        71 v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~  112 (117)
                      +|......+++|+|||||||++.. .++|+|+||+|||.  +|+
T Consensus       421 iCag~~~~~~~C~GDSGGPL~~~~-~~~~~l~GIvS~G~~~~C~  463 (509)
T 2odp_A          421 LCSGTQEDESPCKGESGGAVFLER-RFRFFQVGLVSWGLYNPCL  463 (509)
T ss_dssp             EEECCTTCCCCCGGGTTCEEEEEE-TTEEEEEEEEEEESCCTTC
T ss_pred             EEeCCCCCCcccCCCccCceEEEE-CCeEEEEEEEEEcCCCCCC
Confidence            454333456899999999999984 68999999999997  697

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2

Probab=98.36  E-value=5.8e-08  Score=64.95  Aligned_cols=62  Identities=29%  Similarity=0.465  Sum_probs=39.6

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+ ++...  ..+|....-.+++|+|||||||++.+     +|+||+||| .+|+..
T Consensus       139 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~~C~~~  204 (225)
T 1npm_A          139 LNCAEVKIYSQN-KCERAYPGKITEGMVCAGSSNGADTCQGDSGGPLVCDG-----MLQGITSWGSDPCGKP  204 (225)
T ss_dssp             CEEEEEEECCHH-HHHHHSTTTCCTTEEEEECTTCCBCCTTCTTCEEEETT-----EEEEEEEECCSSSCBT
T ss_pred             ceEeEEeeecHH-HhhHHhCCCCCCCEEeecCCCCCeecCCCCCchheECC-----EEEEEEEeCCCCCCCC
Confidence            344555565554 5654 32211  12343221146899999999999964     789999999 579853

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A

Probab=98.35  E-value=1.1e-07  Score=70.07  Aligned_cols=33  Identities=45%  Similarity=1.067  Sum_probs=29.2

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCc--ccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCA  112 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~  112 (117)
                      +++|+|||||||++.. +++|+|+||+|||.  +|+
T Consensus       425 ~~~C~GDSGGPL~~~~-~~~~~l~GIvS~g~~~~C~  459 (497)
T 1rrk_A          425 PNTCRGDSGGPLIVHK-RSRFIQVGVISWGVVDVCK  459 (497)
T ss_dssp             CCCCGGGTTCEEEEEE-TTEEEEEEEEEEESCCCC-
T ss_pred             CcCCCCCCCCeeEEEe-CCEEEEEEEEEecCCCCCC
Confidence            5799999999999984 67999999999997  798

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*

Probab=98.33  E-value=6e-08  Score=64.84  Aligned_cols=62  Identities=34%  Similarity=0.448  Sum_probs=40.5

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccc-hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc-ccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKY-LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~-~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~~  114 (117)
                      ++...+.+++.. .|.+ +....  ..+|.. ....+++|+|||||||++.+     +|+||+|||. +|+..
T Consensus       135 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~-----~l~Gi~S~g~~~C~~~  201 (223)
T 2bdg_A          135 LQCVNVSVVSEE-VCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNG-----YLQGLVSFGKAPCGQV  201 (223)
T ss_dssp             CEEEEEEBCCHH-HHHHHSTTTCCTTEEEECCSTTCCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCT
T ss_pred             ceEEEEEEeCHH-HhhhhhCCCCCCCeEeccCCCCCCCcCCCCCCchheEcc-----EEEEEEEecCCCCCCC
Confidence            444555565554 5654 32211  123332 23346889999999999975     8999999997 79863

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2

Probab=98.32  E-value=3.1e-07  Score=61.69  Aligned_cols=64  Identities=27%  Similarity=0.328  Sum_probs=42.2

Q ss_pred             CcEEEEEEeecCCCCCC-C-Cce-e--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T-PGV-Y--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~-p~~-~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~  113 (117)
                      ++...+.+++.. .|.+ . ... .  ..+|..... +++|+|||||||++.. +++|+|+||+||+.  +|+.
T Consensus       145 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~~Ca~~~~-~~~C~GDSGgPL~~~~-~g~~~l~Gi~S~g~~~~C~~  215 (236)
T 1elt_A          145 LKQAWLPSVDHA-TCSSSGWWGSTVKTTMVCAGGGA-NSGCNGDSGGPLNCQV-NGSYYVHGVTSFVSSSGCNA  215 (236)
T ss_dssp             CEEEECCEECHH-HHTSTTTTGGGSCTTEEEECCSS-CBCCTTCTTCEEEEEE-TTEEEEEEEEEECCSSCTTC
T ss_pred             heEeEeeecCHH-HhccccccCCcCCcceEEecCCC-CccCCCCCCCeeEEEE-CCEEEEEEEEEEeCCCCCCC
Confidence            344455555554 5764 1 111 1  123433222 6889999999999984 78899999999985  7985

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2

Probab=98.31  E-value=1.1e-07  Score=64.06  Aligned_cols=62  Identities=24%  Similarity=0.364  Sum_probs=40.8

Q ss_pred             CcEEEEEEeecCCCCCC-CCceee--ecccc-hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVYV--QVNKY-LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~t--~v~~~-~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +....+  .+|.. .....++|++||||||++.+     +|+||+||| .+|+..
T Consensus       150 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~~C~~~  216 (240)
T 1sgf_A          150 LQCVNLKLLPNE-DCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDG-----ILQGITSWGPEPCGEP  216 (240)
T ss_dssp             --CEEEEEECTH-HHHTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEETT-----EEEEEECCCCSSCCCS
T ss_pred             ccEEeeeEeCHH-HhhhhhCCCcCCCeEeEccCCCCCCCCCCCCcCcEEEcc-----EEEEEEEECCCCCCCC
Confidence            455666777665 6865 332221  23432 23346789999999999964     799999999 679863

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*

Probab=98.27  E-value=1.5e-07  Score=63.13  Aligned_cols=62  Identities=31%  Similarity=0.484  Sum_probs=41.4

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee-eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY-VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~-t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +..+. ..+|. +....+++|+|||||||++.+     +|+||+||| .+|+..
T Consensus       136 l~~~~~~~~~~~-~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~  201 (231)
T 2aiq_A          136 PHCANINILDYA-VCQAAYKGLAATTLCAGILEGGKDTCKGDSGGPLICNG-----QFQGILSVGGNPCAQP  201 (231)
T ss_dssp             CEEEEEEEECHH-HHHHHCTTCCSSEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEEECSSTTCT
T ss_pred             hhhccceecchh-hhhhhhcCCCcCcEEeccCCCCCcccCCcCCCcEEECC-----EEEEEEEEeCCCCCCC
Confidence            455566666655 6754 33211 12333 223456899999999999964     799999999 689863

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}

Probab=98.27  E-value=2.4e-07  Score=61.99  Aligned_cols=31  Identities=26%  Similarity=0.337  Sum_probs=26.8

Q ss_pred             ccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          82 AKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        82 ~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      +.|||||||++. .+++++|+||+|||.+|+.
T Consensus       165 ~~GDSGGPlv~~-~~g~~~lvGIvS~G~gc~~  195 (218)
T 3cp7_A          165 TGGSSGGPWFLG-NGTGGAQNSTNSYGYTFLP  195 (218)
T ss_dssp             CTTCTTCEEEES-SSSSSCEEEECCEEETTEE
T ss_pred             CCCCcCCeeEEc-cCCCeEEEEEEccccCCCC
Confidence            579999999997 4566789999999999974

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*

Probab=98.24  E-value=1.9e-07  Score=62.43  Aligned_cols=62  Identities=29%  Similarity=0.441  Sum_probs=40.9

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee---eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcc-cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY---VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~---t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~~~  114 (117)
                      ++...+.+++.. .|.. ++...   ..+|. +....+++|+|||||||++.+     .|+||+|||.+ |+..
T Consensus       137 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~  204 (234)
T 3s69_A          137 PYCAYINLLDDA-VCQAGYPELLTEYRTLCAGILEGGKDTCGGDSGGPLICNG-----QFQGIVSFGAHPCGQG  204 (234)
T ss_dssp             CEEEEEEEECHH-HHHHHCTTCCTTSCEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCT
T ss_pred             cceeEEeecCHH-HHhhhcccccCCcceEeccCCCCCCccCCCCCccceEEcC-----EEEEEEEEcccccCCC
Confidence            444556666555 5654 32111   12333 234457899999999999975     69999999975 9864

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A

Probab=98.23  E-value=3.7e-07  Score=61.29  Aligned_cols=62  Identities=27%  Similarity=0.381  Sum_probs=42.0

Q ss_pred             CcEEEEEEeecCCCCCC--CCcee-----eecccc-hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--ccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK--TPGVY-----VQVNKY-LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~--~p~~~-----t~v~~~-~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~~  114 (117)
                      ++...+.+++.. .|.+  ...+.     ..+|.. ....+++|+|||||||++.+     +|+||+|||.  +|+..
T Consensus       138 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~GI~S~g~~~~C~~~  209 (234)
T 1orf_A          138 LREVEITIIDRK-VCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEG-----VFRGVTSFGLENKCGDP  209 (234)
T ss_dssp             CEEEEEEEECHH-HHTSTTTTTTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEETT-----EEEEEEEECCTTCTTCT
T ss_pred             ceEeEEEeeCHH-HcCCccccccCCccCCCEEEecCCCCCCcCCCCCCCCeEEECC-----EEEEEEEEcCCCCCCCC
Confidence            556677777766 6862  11110     223432 22346899999999999964     7999999997  89863

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=98.22  E-value=3.2e-07  Score=70.61  Aligned_cols=35  Identities=43%  Similarity=0.976  Sum_probs=30.6

Q ss_pred             HHhhccCCCCCceeeccCCCcEEEEEeeeeCc--cccc
Q psy7307          78 IYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQ  113 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~  113 (117)
                      .+++|+|||||||++.. .++|+|+||+|||.  +|+.
T Consensus       666 ~~~~C~GDSGGPL~~~~-~~~~~lvGIvS~G~~~~C~~  702 (741)
T 3hrz_D          666 DPNTCRGDSGGPLIVHK-RSRFIQVGVISWGVVDVCKN  702 (741)
T ss_dssp             CCCCCGGGTTCEEEEEE-TTEEEEEEEEEEESSCCCC-
T ss_pred             CCCcCcCcccCceEEee-CCeEEEEEEEeecCCcccCC
Confidence            36799999999999984 68999999999997  8986

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2

Probab=98.21  E-value=9.1e-07  Score=59.50  Aligned_cols=35  Identities=37%  Similarity=0.658  Sum_probs=29.7

Q ss_pred             HHHhhccCCCCCceeeccCCCcEEEEEeeee----Cccccc
Q psy7307          77 WIYNTAKGDSGGPLLLQRPDKQWTIIGVVSW----GIGCAQ  113 (117)
Q Consensus        77 wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~----~~~C~~  113 (117)
                      ..+++|+|||||||++..  ++|+|+||+||    +.+|+.
T Consensus       182 ~~~~~C~GDSGgPL~~~~--~~~~l~Gi~S~~~~~g~~C~~  220 (241)
T 1m9u_A          182 GNTGACNGDSGGPLNCPD--GGTRVVGVTSWVVSSGLGACL  220 (241)
T ss_dssp             SCCBCCTTCTTCEEEEES--SSEEEEEEEEECCBCTTSCBC
T ss_pred             CCCeeecCcCCccEEEeC--CCEEEEEEEEEeccCCCCccC
Confidence            346889999999999984  78999999999    457875

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A

Probab=98.20  E-value=5.8e-07  Score=60.67  Aligned_cols=64  Identities=25%  Similarity=0.299  Sum_probs=42.4

Q ss_pred             CcEEEEEEeecCCCCCC---CCcee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK---TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~---~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+   +....  ..+|. ......++|+|||||||++.+   .|+|+||+||| .+|+..
T Consensus       138 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~---~~~l~Gi~S~g~~~C~~~  208 (240)
T 2zgc_A          138 LRELDLQVLDTR-MCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVCGK---GRVLAGVLSFSSRVCTDI  208 (240)
T ss_dssp             CEEEEEEECCHH-HHTSTTTTTTCCCTTEEEEECSSTTCBCCTTCTTCEEEETT---TTEEEEEECCCCSSTTCT
T ss_pred             eeeeeeeecCHH-HhCCccccCCCCCCceEeeccCCCCCccCCCCccCeeEECC---CCEEEEEEEECCCCCCCC
Confidence            455666777665 6764   11111  12333 222346889999999999964   37999999999 689864

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*

Probab=98.18  E-value=1.1e-06  Score=58.65  Aligned_cols=57  Identities=23%  Similarity=0.318  Sum_probs=37.9

Q ss_pred             CcEEEEEEeecCCCCCCCCceeeeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGKTPGVYVQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~~p~~~t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+     ..+|. +.....++|+|||||||++.+     +|+||+||| .+|+..
T Consensus       141 l~~~~~~~~~~~-~C~~-----~~~Ca~~~~~~~~~C~GDSGgPl~~~g-----~l~Gi~S~g~~~C~~~  199 (225)
T 1a7s_A          141 PRFVNVTVTPED-QCRP-----NNVCTGVLTRRGGICNGDGGTPLVCEG-----LAHGVASFSLGPCGRG  199 (225)
T ss_dssp             CEEEEEEECCGG-GSCT-----TEEEEECSSSSCBCCTTCTTCEEEETT-----EEEEEEEEECSSTTSS
T ss_pred             cceeeeEECCHH-Hhcc-----CceEEeccCCCCCcccCCCcchheeCC-----EEEEEEEEccCCcCCC
Confidence            344555555554 5653     12222 222235889999999999974     899999999 679864

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0

Probab=98.18  E-value=1.9e-07  Score=62.26  Aligned_cols=61  Identities=18%  Similarity=0.215  Sum_probs=41.8

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee---eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY---VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~---t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.. +...+   ..+|..... .+.|+||||+||++.+     .|+||+||+.+|+..
T Consensus       142 L~~~~~~~~~~~-~C~~~~~~~~~~~~~~Ca~~~~-~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~c~~~  206 (228)
T 3h7o_A          142 LKSAQLTVVDLD-ECRTKYGPIFLSLQVFCAQKVG-VSLESGDAGDPTVQQD-----TLVGVAAYFPKRPEG  206 (228)
T ss_dssp             CEEEEEEEECHH-HHHHHHTTSCCCSSEEEEECTT-CCCCGGGTTCEEEETT-----EEEEEECCCTTCCTT
T ss_pred             cccceeEEEcHH-HHHHHhcCccCCceEEecCCCC-CcCCCCCCCCcceecC-----eEEEEEeecCcCCCC
Confidence            556677777665 6765 22211   123432222 7899999999999965     699999999999863

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A

Probab=98.18  E-value=4.4e-07  Score=60.70  Aligned_cols=65  Identities=29%  Similarity=0.388  Sum_probs=43.3

Q ss_pred             CcEEEEEEeecCCCCCC-CCc-ee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG-VY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQVL  115 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~-~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~~~  115 (117)
                      ++...+.+++.. .|.+ ++. ..  ..+|....-.+++|+|||||||++.+   .++|+||+||+.  +|....
T Consensus       138 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPl~~~~---~~~l~Gi~S~g~~~~C~~~~  208 (230)
T 2hlc_A          138 LQYTYNLVIDND-RCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPFVLSD---KNLLIGVVSFVSGAGCESGK  208 (230)
T ss_dssp             CEEEEEEEECHH-HHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEEEEGG---GTEEEEEEEECCTTCTTSCC
T ss_pred             eEEEEEEEeCHH-HhhhhhCCCcccCCeEEecCCCCCCcCCCCCCCeeEECc---CCEEEEEEEEeCCCCCCCCC
Confidence            455666677666 6765 322 11  23444333346899999999999975   248999999986  786443

>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A

Probab=98.17  E-value=9.5e-07  Score=57.91  Aligned_cols=50  Identities=30%  Similarity=0.526  Sum_probs=35.9

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCC--C-CCce-eeecccchHHHHhhcc
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCG--K-TPGV-YVQVNKYLRWIYNTAK   83 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~--~-~p~~-~t~v~~~~~wi~~~~~   83 (117)
                      ..+.|.|||||||++.  +++  ++||+|++..|.  . .+++ |+  ..|.+||++.++
T Consensus       146 ~~~~~~GdSGGPl~~~--~g~--lvGI~s~g~~~~~~~~~~~v~~~--~~~~~wI~~~~~  199 (200)
T 2w7s_A          146 DAYAQPGNSGSPVLNS--KHE--LIGILYAGSGKDESEKNFGVYFT--PQLKEFIQNNIE  199 (200)
T ss_dssp             CSCCCTTCTTCEEECT--TSC--EEEEEEEEC----CCCEEEEECC--HHHHHHHHHTSC
T ss_pred             cceeCCCCccCeEECc--CCE--EEEEEeccccCCCCccceeeecH--HHHHHHHHhhcc
Confidence            4678999999999964  244  899999986663  2 2355 55  789999998764

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}

Probab=98.13  E-value=9.6e-07  Score=58.89  Aligned_cols=62  Identities=19%  Similarity=0.151  Sum_probs=41.3

Q ss_pred             CcEEEEEEeecCCCCCC-CCc------ee-eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPG------VY-VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~------~~-t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +..      +. ..+|. ......+.|+|||||||++.+     .|+||+|||.+|+..
T Consensus       139 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~-----~l~Gi~S~g~~C~~~  209 (235)
T 3h7t_A          139 LMEANFTVVDRK-SCEEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQNG-----TLVGVASYISSMPSE  209 (235)
T ss_dssp             CEEEEEEEECHH-HHHHHHHTTTCGGGCSTTEEEECBTTTTBBCCTTCTTCEEEETT-----EEEEEECCCTTCCTT
T ss_pred             HhhCCCceeCHH-HHHHHhhhcccCccccCCeEecCCCCCCCccccCCCCCceeeCC-----eEEEEEEecCCCCCC
Confidence            455666676665 6754 211      11 12333 222357889999999999965     599999999999863

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*

Probab=98.13  E-value=9.2e-07  Score=58.95  Aligned_cols=63  Identities=30%  Similarity=0.483  Sum_probs=41.1

Q ss_pred             CcEEEEEEeecCCCCCC-CC--cee-eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TP--GVY-VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p--~~~-t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +.  .+. ..+|. +....+++|+|||||||++.+  +  +|+||+|||.+|+.+
T Consensus       137 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~--g--~l~Gi~S~g~~C~~~  204 (224)
T 1pq7_A          137 LLKVTVPIVSRA-TCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGGPIVDSS--N--TLIGAVSWGNGCARP  204 (224)
T ss_dssp             CEEEEEEEECHH-HHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEECTT--C--CEEEEEEECSSSSCT
T ss_pred             eeEeEEEEEcHH-HhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCCcceECcC--C--eEEEEEEeCCCCCCC
Confidence            455566666665 6754 21  111 12333 223346889999999999852  2  799999999999863

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A

Probab=98.13  E-value=3.8e-07  Score=60.95  Aligned_cols=59  Identities=27%  Similarity=0.324  Sum_probs=37.7

Q ss_pred             CcEEEEEEeecCCCCCC-CCceee---eccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVYV---QVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~t---~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ++...+.+++.. .|.+ +...+.   .+|. .....++.|+|||||||++++     +|+||+|||  |+.
T Consensus       140 L~~~~~~i~~~~-~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g--c~~  203 (227)
T 1iau_A          140 LQEVKMTVQEDR-KCESDLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNK-----VAQGIVSYG--RNN  203 (227)
T ss_dssp             CEEEEEEBCCHH-HHHHHTTTTCCTTTEEEESCTTSCCBCCTTCTTSEEEETT-----EEEEEEEEE--CTT
T ss_pred             eeEeeeeeechH-HhhhHhccccCCCcEEEeECCCCCCeeeecCCCchheEee-----EEEEEEeEe--cCC
Confidence            444555555554 5654 322121   2333 223346899999999999964     799999998  764

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=98.08  E-value=6.3e-07  Score=61.96  Aligned_cols=62  Identities=11%  Similarity=0.065  Sum_probs=41.8

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ++.+.+.+++.. .|.+ +....  ..+|.....  ..+.+||||||++. .+++|+|+||+||+. |+.
T Consensus       190 L~~~~v~~~~~~-~C~~~~~~~~~~~~~Ca~~~~--~~~~gDSGgPlv~~-~~~~~~l~GIvS~g~-c~~  254 (283)
T 3f1s_B          190 LTTRPVTLVEGE-ECGQVLNVTVTTRTYCERSSV--AAMHWMDGSVVTRE-HRGSWFLTGVLGSQP-VGG  254 (283)
T ss_dssp             CEEEEEEEECHH-HHHHHHTSCCCTTEEEEECSS--CGGGBCTTCEEEEE-CSSCEEEEEEECCCS-GGG
T ss_pred             eeEEEEeEeCHH-HHhhhhcCCCCCCeEcccCCC--CCCCCCCCCcEEEE-ECCEEEEEEEEEeCC-CCC
Confidence            667778888776 7865 32211  124443222  23467999999998 578999999999986 543

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*

Probab=98.07  E-value=4.4e-06  Score=55.38  Aligned_cols=55  Identities=31%  Similarity=0.361  Sum_probs=36.9

Q ss_pred             CcEEEEEEeecCCCCCCCCceeeeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeee--Ccccccc
Q psy7307          47 KQWTIIGVVSWGIGCGKTPGVYVQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSW--GIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~~p~~~t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~--~~~C~~~  114 (117)
                      ++...+.++ .. .|.+.     .+|. ......+.|+|||||||++++     +|+||+||  |. |+..
T Consensus       140 l~~~~~~~~-~~-~C~~~-----~~Ca~~~~~~~~~C~GDSGgPl~~~~-----~l~Gi~S~~~g~-C~~~  197 (218)
T 2z7f_E          140 LQELNVTVV-TS-LCRRS-----NVCTLVRGRQAGVCFGDSGSPLVCNG-----LIHGIASFVRGG-CASG  197 (218)
T ss_dssp             CEEEEEEEE-CT-TCCTT-----SEEEECTTSCCBCCTTCTTCEEEETT-----EEEEEEEEESSS-TTCS
T ss_pred             heEeeeEEe-hh-HcCcc-----eeeeccCCCCCeeCCCcCCCceEEcc-----EEEEEEEeCCcc-CCCC
Confidence            455556666 43 67532     2222 222246889999999999975     89999999  65 8864

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A

Probab=98.07  E-value=2.1e-06  Score=57.28  Aligned_cols=62  Identities=31%  Similarity=0.487  Sum_probs=39.3

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeC-cccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG-IGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~-~~C~~~  114 (117)
                      ++...+.+++.. .|.+ +....  ..+|. +....++.|+|||||||++.+     .|+||+||| .+|+..
T Consensus       134 L~~~~~~~~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~C~~~  200 (224)
T 2qxi_A          134 LMCVDVKLISPQ-DCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPLVCRG-----TLQGLVSWGTFPCGQP  200 (224)
T ss_dssp             CEEEEEEEECHH-HHHHHHGGGCCTTEEEEECTTCCCBCCTTCTTCEEEETT-----EEEEEEEECCSSSCCT
T ss_pred             heEEEeeecCHH-HhhHHhcCcCCCCeEEecCCCCCCccCCCCccccEEECC-----EEEEEEEeCCCCCCCC
Confidence            344555566554 5654 21111  12333 222346789999999999964     799999999 689863

>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}

Probab=98.03  E-value=2.1e-06  Score=56.19  Aligned_cols=51  Identities=22%  Similarity=0.419  Sum_probs=36.6

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCC---CCCC-CCceeeecccchHHHHhhcc
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI---GCGK-TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~---~C~~-~p~~~t~v~~~~~wi~~~~~   83 (117)
                      ..+.|.||||+||++.  ++  .++||++++.   .|.. .+.+|.. ..|.+||++.+.
T Consensus       149 ~~~~~~GdSGGPl~~~--~g--~lvGI~s~g~~~~~~~~~~~~~~~~-~~~~~wI~~~~~  203 (204)
T 2vid_A          149 SAHTESGNSGSPVLNS--NN--ELVGIHFASDVKNDDNRNAYGVYFT-PEIKKFIAENID  203 (204)
T ss_dssp             CCCCCGGGTTCEEECT--TS--CEEEEEEEECC---CCCCEEEECCC-HHHHHHHHHHSC
T ss_pred             ecccCCCCccCcEECC--CC--eEEEEEecCccCCCcccccceeEeC-HHHHHHHHhhcC
Confidence            4678999999999954  24  4899999985   3554 2234333 779999998763

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A

Probab=98.01  E-value=3.3e-06  Score=56.14  Aligned_cols=32  Identities=34%  Similarity=0.532  Sum_probs=27.9

Q ss_pred             HHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          78 IYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ..+.|++||||||++..     +|+||+|||.+|+..
T Consensus       176 ~~~~C~gDsGgPl~~~~-----~l~Gi~S~g~~c~~~  207 (227)
T 3fzz_A          176 KGASFEEDSGGPLVCKR-----AAAGIVSYGQTDGSA  207 (227)
T ss_dssp             CBCCTTTTTTCEEEETT-----EEEEEEEECCTTCSS
T ss_pred             CCcccccCCccceEEec-----CCcEEEEECCCCCCC
Confidence            46789999999999975     899999999988754

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A

Probab=98.01  E-value=2.2e-06  Score=59.12  Aligned_cols=51  Identities=16%  Similarity=0.342  Sum_probs=38.2

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhcc
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~   83 (117)
                      ..+.|.|||||||+..  .++  ++||+||+..|...+.++. ...|.+||++.+.
T Consensus       161 ~~~~c~GdSGGPLv~~--~g~--lvGIvS~G~~~~~~~~~~~-~~~~~~wI~~~i~  211 (274)
T 2o8l_A          161 DLSTTGGNSGSPVFNE--KNE--VIGIHWGGVPNEFNGAVFI-NENVRNFLKQNIE  211 (274)
T ss_dssp             SCCCCTTCTTCEEECT--TSC--EEEEEEEEETTTEEEEEEC-CHHHHHHHHHHCT
T ss_pred             CcccCCCCchhheecc--CCe--EEEEEeCcccCCCCceEEe-cHHHHHHHHHHHh
Confidence            5689999999999964  244  8999999866764333333 5778999987764

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2

Probab=97.99  E-value=2.3e-06  Score=57.14  Aligned_cols=33  Identities=39%  Similarity=0.626  Sum_probs=27.6

Q ss_pred             HHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--ccccc
Q psy7307          77 WIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQV  114 (117)
Q Consensus        77 wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~~  114 (117)
                      ..+++|++||||||++.+     +|+||+|||.  +|...
T Consensus       169 ~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~~C~~~  203 (226)
T 1azz_A          169 GGKGTCNGDSGGPLNYNG-----LTYGITSFGAAAGCEAG  203 (226)
T ss_dssp             TTCBCCTTCTTCEEEETT-----EEEEEEEEEETTCTTSC
T ss_pred             CCCccCCCCCCcceEECC-----EEEEEEEEECCCCCCCC
Confidence            346899999999999753     8999999997  78753

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1

Probab=97.98  E-value=2.7e-06  Score=58.52  Aligned_cols=52  Identities=15%  Similarity=0.325  Sum_probs=38.8

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhccC
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      ..+.|.|||||||+..  .+  .++||+|++..|...+.++. ...|.+||++.++.
T Consensus       161 ~~~~c~GdSGGPLv~~--~g--~lvGIvS~G~~~~~~~~~~~-~~~~~~wI~~~i~~  212 (268)
T 1wcz_A          161 DLSTTGGNSGSPVFNE--KN--EVIGIHWGGVPNEFNGAVFI-NENVRNFLKQNIED  212 (268)
T ss_dssp             SBCCCTTCTTCEEECT--TS--CEEEEEEEEETTTEEEEEEC-CHHHHHHHHHHCTT
T ss_pred             ecccCCCCccCeEEcc--CC--EEEEEEeCCccCCcceeEEc-CHHHHHHHHHHHHh
Confidence            5689999999999953  24  48999999866764333443 57789999887753

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A

Probab=97.92  E-value=5.3e-06  Score=55.26  Aligned_cols=60  Identities=28%  Similarity=0.453  Sum_probs=40.3

Q ss_pred             CcEEEEEEeecCCCCCC-CC--cee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc-cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TP--GVY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p--~~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~  113 (117)
                      ++...+.+++.. .|.+ +.  ...  ..+|... -..+.|++||||||++.+     +|+||+||+. +|+.
T Consensus       141 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~~Ca~~-~~~~~C~GDsGgPL~~~~-----~l~Gi~s~g~~~C~~  206 (228)
T 2xw9_A          141 LQHVLLPVLDRA-TCNRRTHHDGAITERLMCAES-NRRDSCKGDAGGPLVCGG-----VLEGVVTSGSRVCGN  206 (228)
T ss_dssp             CEEEECCEECHH-HHTSTTTTTTCCCTTEEEECC-SSCBCCTTCTTCEEEETT-----EEEEEECCSCCCSSC
T ss_pred             heEEEEEEcChh-HhcCccccCCcccCCEEecCC-CCCccCCCCCcccEEECC-----EEEEEEeecCCcCCC
Confidence            445556666665 6765 32  111  1233322 236889999999999964     8999999998 8986

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2

Probab=97.88  E-value=3.5e-06  Score=56.26  Aligned_cols=59  Identities=29%  Similarity=0.258  Sum_probs=36.4

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccch-HHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKYL-RWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~~-~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ++...+.+++.. .|.+ +....  ..+|... ......|+|||||||++.+     +|+||+|||  |+.
T Consensus       140 L~~~~~~i~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~~~GDsGgPL~~~~-----~l~Gi~S~g--c~~  202 (227)
T 1euf_A          140 LQEVDLEVQSEE-KCIARFKNYIPFTQICAGDPSKRKNSFSGDSGGPLVCNG-----VAQGIVSYG--RND  202 (227)
T ss_dssp             CEEEEEEBCCTH-HHHTTCTTCCTTTEEEESCTTSCCBCCTTCTTCEEEETT-----EEEEEEEEC--CTT
T ss_pred             heEeEeccccHH-HhhHhhcCcCCCcEEEccCCCCCCcccccCCCCceEECC-----EEEEEEEEe--CCC
Confidence            455556666555 6765 32211  1234321 1113456999999999964     899999998  654

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2

Probab=97.85  E-value=2.6e-05  Score=51.61  Aligned_cols=32  Identities=44%  Similarity=0.683  Sum_probs=26.8

Q ss_pred             HHhhccCCCCCceeeccCCCcEEEEEeeeeCc-ccccc
Q psy7307          78 IYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQV  114 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~~  114 (117)
                      ..+.|+|||||||++.+     +|+||+||+. +|+..
T Consensus       168 ~~~~C~GDSGgPL~~~~-----~l~Gi~s~~~~gC~~~  200 (221)
T 1fuj_A          168 KAGICFGDSGGPLICDG-----IIQGIDSFVIWGCATR  200 (221)
T ss_dssp             SCBCCTTCTTCEEEETT-----EEEEEEEECSSSTTCS
T ss_pred             CCCCCCCCCCCeeEECC-----EEeEEEEEeccCCCCC
Confidence            45789999999999964     7999999965 58864

>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A

Probab=97.84  E-value=7e-06  Score=53.14  Aligned_cols=45  Identities=38%  Similarity=0.515  Sum_probs=36.8

Q ss_pred             CcccCCCCCeeEEEcCCCcEEEEEEeecCCC-CCC-CCceeeecccchHHHH
Q psy7307          30 QAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGK-TPGVYVQVNKYLRWIY   79 (117)
Q Consensus        30 ~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~-C~~-~p~~~t~v~~~~~wi~   79 (117)
                      ..|.||||+||++.   .  .++||++++.. |.. .|++|+++..+.+|+.
T Consensus       131 c~~~GDSGGPlv~~---~--~~vGI~s~g~~~~~~~~~~v~~~v~~~~~~l~  177 (181)
T 2sga_A          131 CAQPGDSGGSLFAG---S--TALGLTSGGSGNCRTGGTTFYQPVTEALSAYG  177 (181)
T ss_dssp             CCCTTCTTCEEEET---T--EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHT
T ss_pred             ccCCCCCCCEEEEC---C--EEEEEEEeeCCCCcCCCceEEEEHHHHHHhcC
Confidence            45689999999965   3  58999999853 655 7899999999999874

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*

Probab=97.82  E-value=9.1e-06  Score=54.11  Aligned_cols=59  Identities=29%  Similarity=0.271  Sum_probs=36.7

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGC  111 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C  111 (117)
                      ++...+.+++.. .|.+ +..+.  ..+|. .....++.|+|||||||++.+     +|+||+|||.+|
T Consensus       139 l~~~~~~i~~~~-~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~-----~l~Gi~S~g~~~  201 (224)
T 1cgh_A          139 LREVQLRVQRDR-QCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNN-----VAHGIVSYGKSS  201 (224)
T ss_dssp             CEEEEEEBCCHH-HHHHHCTTCCTTTEEEECCTTSCCBCCTTCTTCEEEETT-----EEEEEEEECCTT
T ss_pred             ceEEEEEeeCHH-HHHHHhCcCCCcceEeeccCCCCCeEeeCCCccceEEcc-----EEEEEEEEECCC
Confidence            344555555544 5654 31111  12333 222346899999999999964     899999999843

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A

Probab=97.82  E-value=5.7e-06  Score=54.70  Aligned_cols=30  Identities=33%  Similarity=0.480  Sum_probs=26.1

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCcccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCA  112 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~  112 (117)
                      .++|+|||||||++.+.    +|+||+|||.+|+
T Consensus       164 ~~~C~GDSGgPl~~~~g----~lvGi~S~g~~c~  193 (215)
T 1p3c_A          164 IDTFSGNSGSAMLDQNQ----QIVGVHNAGYSNG  193 (215)
T ss_dssp             CCCCTTCTTCEEECTTS----CEEEECCEEEGGG
T ss_pred             cccCCCCCCCeeEccCC----eEEEEEecccCCC
Confidence            57899999999998532    7999999999887

>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...

Probab=97.81  E-value=1e-05  Score=52.48  Aligned_cols=27  Identities=44%  Similarity=0.676  Sum_probs=23.2

Q ss_pred             hccCCCCCceeeccCCCcEEEEEeeeeCcccc
Q psy7307          81 TAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCA  112 (117)
Q Consensus        81 ~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~  112 (117)
                      +|+|||||||++.+     .++||+||+.+|.
T Consensus       136 ac~GDSGGPlv~~~-----~~vGI~s~g~~~~  162 (185)
T 2qa9_E          136 AEPGDSGGPLYSGT-----RAIGLTSGGSGNC  162 (185)
T ss_dssp             CCTTCTTCEEEETT-----EEEEEEEEEEEET
T ss_pred             CCCCCccceEEECC-----EEEEEEEecCCCC
Confidence            38999999999863     7999999998754

>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*

Probab=97.73  E-value=1.1e-05  Score=55.72  Aligned_cols=31  Identities=26%  Similarity=0.498  Sum_probs=26.2

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCc-ccccc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQV  114 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~~  114 (117)
                      ++|+||||+||++..    ++|+||+|||. +|+..
T Consensus       188 dtC~gdsGgPl~~~~----~~~~Gi~s~g~~~C~~~  219 (268)
T 1arb_A          188 VTEPGSSGSPIYSPE----KRVLGQLHGGPSSCSAT  219 (268)
T ss_dssp             CCCTTCTTCEEECTT----SCEEEEEEECSCCTTCC
T ss_pred             CCccCcccCCcEeeC----CEEEEEEeecCcccCCC
Confidence            689999999999842    36999999997 79864

>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A

Probab=97.68  E-value=1.4e-05  Score=53.85  Aligned_cols=30  Identities=20%  Similarity=0.245  Sum_probs=25.3

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCcccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCA  112 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~  112 (117)
                      ..+|.|||||||+...    +.|+||+|||.+|+
T Consensus       188 ~~~c~GdSGGPl~~~~----g~lvGI~s~g~~c~  217 (242)
T 1agj_A          188 GFTVPGNSGSGIFNSN----GELVGIHSSKVSHL  217 (242)
T ss_dssp             CCCCGGGTTCEEECTT----SEEEEEEEEEEECS
T ss_pred             CCcCCCCCchHhcccC----CEEEEEEecccccc
Confidence            3679999999999742    27999999999997

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=97.67  E-value=2.2e-05  Score=54.86  Aligned_cols=61  Identities=11%  Similarity=0.079  Sum_probs=39.1

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCA  112 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~  112 (117)
                      ++...+.+++.. .|.+ +....  ..++....  ...+.+||||||++. .+++|+|+||+||+. |.
T Consensus       231 L~~~~v~~~~~~-~C~~~~~~~~~~~~~Ca~~~--~~~~~gDsGgPl~~~-~~~~~~l~Gi~S~g~-~~  294 (317)
T 3h5c_B          231 LTTRPVTLVEGE-ECGQVLNVTVTTRTYCERSS--VAAMHWMDGSVVTRE-HRGSWFLTGVLGSQP-VG  294 (317)
T ss_dssp             CBCCEEEEECHH-HHHHHHTCCCCTTEEEEECS--CCCCCCCTTCEEEEE-ETTEEEEEEEECCCC-SS
T ss_pred             ceEEEEEEECHH-HHhhhhcCcCCCceeECCCC--CCCcCCCCCCCEEEe-cCCEEEEEEEEEECC-CC
Confidence            455566666655 5654 22111  12333211  235688999999998 577999999999986 44

>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A

Probab=97.57  E-value=2.5e-05  Score=51.05  Aligned_cols=30  Identities=30%  Similarity=0.546  Sum_probs=22.5

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCcccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCA  112 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~  112 (117)
                      .++|+|||||||+..+  +  .++||+||+.+|+
T Consensus       147 ~~~~~GdSGGPl~~~~--g--~lvGI~s~g~~~~  176 (200)
T 2w7s_A          147 AYAQPGNSGSPVLNSK--H--ELIGILYAGSGKD  176 (200)
T ss_dssp             SCCCTTCTTCEEECTT--S--CEEEEEEEEC---
T ss_pred             ceeCCCCccCeEECcC--C--EEEEEEeccccCC
Confidence            4679999999999742  2  5899999998764

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}

Probab=97.55  E-value=2e-05  Score=52.58  Aligned_cols=31  Identities=26%  Similarity=0.292  Sum_probs=25.1

Q ss_pred             ccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC
Q psy7307          32 QTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK   63 (117)
Q Consensus        32 C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~   63 (117)
                      |.|||||||++. .++++.++||+||+..|..
T Consensus       165 ~~GDSGGPlv~~-~~g~~~lvGIvS~G~gc~~  195 (218)
T 3cp7_A          165 TGGSSGGPWFLG-NGTGGAQNSTNSYGYTFLP  195 (218)
T ss_dssp             CTTCTTCEEEES-SSSSSCEEEECCEEETTEE
T ss_pred             CCCCcCCeeEEc-cCCCeEEEEEEccccCCCC
Confidence            569999999986 3455679999999977863

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A

Probab=97.46  E-value=4.1e-05  Score=52.73  Aligned_cols=31  Identities=26%  Similarity=0.444  Sum_probs=25.6

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      .++|.|||||||+...    +.|+||+|||.+|+.
T Consensus       162 ~~~c~GdSGGPLv~~~----g~lvGIvS~G~~~~~  192 (274)
T 2o8l_A          162 LSTTGGNSGSPVFNEK----NEVIGIHWGGVPNEF  192 (274)
T ss_dssp             CCCCTTCTTCEEECTT----SCEEEEEEEEETTTE
T ss_pred             cccCCCCchhheeccC----CeEEEEEeCcccCCC
Confidence            5789999999999742    268999999988763

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1

Probab=97.45  E-value=4.3e-05  Score=52.44  Aligned_cols=31  Identities=26%  Similarity=0.444  Sum_probs=25.6

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      .++|+|||||||+...    +.|+||+|||.+|+.
T Consensus       162 ~~~c~GdSGGPLv~~~----g~lvGIvS~G~~~~~  192 (268)
T 1wcz_A          162 LSTTGGNSGSPVFNEK----NEVIGIHWGGVPNEF  192 (268)
T ss_dssp             BCCCTTCTTCEEECTT----SCEEEEEEEEETTTE
T ss_pred             cccCCCCccCeEEccC----CEEEEEEeCCccCCc
Confidence            5789999999999742    269999999988763

>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A

Probab=97.26  E-value=0.0001  Score=47.52  Aligned_cols=28  Identities=43%  Similarity=0.761  Sum_probs=22.9

Q ss_pred             hccCCCCCceeeccCCCcEEEEEeeeeCcc-ccc
Q psy7307          81 TAKGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQ  113 (117)
Q Consensus        81 ~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~~  113 (117)
                      ++.||||+||++.+     .++||+||+.+ |+.
T Consensus       132 ~~~GDSGGPlv~~~-----~~vGI~s~g~~~~~~  160 (181)
T 2sga_A          132 AQPGDSGGSLFAGS-----TALGLTSGGSGNCRT  160 (181)
T ss_dssp             CCTTCTTCEEEETT-----EEEEEEEEEEEETTT
T ss_pred             cCCCCCCCEEEECC-----EEEEEEEeeCCCCcC
Confidence            35899999999864     79999999975 653

>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}

Probab=97.10  E-value=0.00016  Score=47.15  Aligned_cols=27  Identities=26%  Similarity=0.379  Sum_probs=22.6

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      .++|.|||||||+...    +.|+||+||+.
T Consensus       150 ~~~~~GdSGGPl~~~~----g~lvGI~s~g~  176 (204)
T 2vid_A          150 AHTESGNSGSPVLNSN----NELVGIHFASD  176 (204)
T ss_dssp             CCCCGGGTTCEEECTT----SCEEEEEEEEC
T ss_pred             cccCCCCccCcEECCC----CeEEEEEecCc
Confidence            5789999999999642    26999999997

>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A

Probab=97.01  E-value=0.00028  Score=47.43  Aligned_cols=44  Identities=16%  Similarity=0.277  Sum_probs=30.9

Q ss_pred             CCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC---CCceeeecccchH
Q psy7307          29 RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK---TPGVYVQVNKYLR   76 (117)
Q Consensus        29 ~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~---~p~~~t~v~~~~~   76 (117)
                      .++|.|||||||++.  .+  .++||+||+..|..   ..++.+.+.....
T Consensus       188 ~~~c~GdSGGPl~~~--~g--~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~  234 (242)
T 1agj_A          188 GFTVPGNSGSGIFNS--NG--ELVGIHSSKVSHLDREHQINYGVGIGNYVK  234 (242)
T ss_dssp             CCCCGGGTTCEEECT--TS--EEEEEEEEEEECSSTTCEEEEEEECCHHHH
T ss_pred             CCcCCCCCchHhccc--CC--EEEEEEeccccccCcCCCceeeEEehHHHH
Confidence            468999999999964  24  48999999877863   2344455653333

>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1

Probab=96.81  E-value=0.0018  Score=42.07  Aligned_cols=44  Identities=25%  Similarity=0.333  Sum_probs=34.5

Q ss_pred             CCcccCCCCCeeEEEcCCCcEEEEEEeecCCC-CCC-CCceeeecccchHH
Q psy7307          29 RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGK-TPGVYVQVNKYLRW   77 (117)
Q Consensus        29 ~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~-C~~-~p~~~t~v~~~~~w   77 (117)
                      ...|.||||+||++.   .  .++||.+++.. |.. .+.+|+++..+++.
T Consensus       136 ~~~~~GdSGgpl~~~---~--~~vGi~s~~~~~~~~~~~~~~~~i~~~~~~  181 (187)
T 1hpg_A          136 ACSAGGDSGGAHFAG---S--VALGIHSGSSGCSGTAGSAIHQPVTEALSA  181 (187)
T ss_dssp             CCCCTTCTTCEEEET---T--EEEEEEEEESCCBTTBCCCEEEEHHHHHHH
T ss_pred             cccCCCCCCCeEEEC---C--EEEEEEEeeCCCCCCCCceEEEEHHHHHHH
Confidence            457899999999965   3  48999998753 766 78899998776543

>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}

Probab=96.79  E-value=0.0005  Score=45.30  Aligned_cols=28  Identities=43%  Similarity=0.674  Sum_probs=22.4

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCcc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG  110 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~  110 (117)
                      ...|.|||||||++.+  +  .|+||+||+..
T Consensus       151 ~~~~~GdSGGPlv~~~--g--~lvGI~s~g~~  178 (210)
T 2as9_A          151 AYIEPGNSGSPVLNSN--N--EVIGVVYGGIG  178 (210)
T ss_dssp             CCCCTTCTTCEEECTT--S--CEEEEECCSCC
T ss_pred             CccCCCCccCcEECCC--C--eEEEEEecccc
Confidence            3578999999999742  2  58999999864

>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}

Probab=96.74  E-value=0.00084  Score=43.87  Aligned_cols=42  Identities=38%  Similarity=0.523  Sum_probs=33.2

Q ss_pred             cCCCCCeeEEEcCCCcEEEEEEeecCCC-CCC-CCceeeecccchHHHH
Q psy7307          33 TGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGK-TPGVYVQVNKYLRWIY   79 (117)
Q Consensus        33 ~~dsG~pl~~~~~~~~~~~vgI~s~~~~-C~~-~p~~~t~v~~~~~wi~   79 (117)
                      .||||+||+..   +  .++||.+++.. |.. .+++|+++..++++..
T Consensus       134 ~GDSGgpl~~~---~--~~vGi~s~~~~~c~~~~~~~~~pi~~~l~~~g  177 (189)
T 2ea3_A          134 PGDSGGSLLAG---N--QAQGVTSGGSGNCRTGGTTFFQPVNPILQAYG  177 (189)
T ss_dssp             TTCTTCEEEET---T--EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHT
T ss_pred             CCCccCeEEEC---C--EEEEEEeecCCCCCCCCcEEEEEHHHHHHHCC
Confidence            79999999953   4  38999999754 765 6789999888877763

>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1

Probab=96.66  E-value=0.0015  Score=42.43  Aligned_cols=30  Identities=30%  Similarity=0.440  Sum_probs=24.2

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCcc-cccc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQV  114 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~~~  114 (117)
                      ..+.+|||+||++.+     .++||+||+.+ |...
T Consensus       137 ~~~~GdSGgpl~~~~-----~~vGi~s~~~~~~~~~  167 (187)
T 1hpg_A          137 CSAGGDSGGAHFAGS-----VALGIHSGSSGCSGTA  167 (187)
T ss_dssp             CCCTTCTTCEEEETT-----EEEEEEEEESCCBTTB
T ss_pred             ccCCCCCCCeEEECC-----EEEEEEEeeCCCCCCC
Confidence            356899999999864     79999999975 7643

>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}

Probab=96.66  E-value=0.00074  Score=44.06  Aligned_cols=26  Identities=50%  Similarity=0.810  Sum_probs=21.9

Q ss_pred             cCCCCCceeeccCCCcEEEEEeeeeCcc-ccc
Q psy7307          83 KGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQ  113 (117)
Q Consensus        83 ~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~~  113 (117)
                      .+|||+||++.+     .++||+||+.+ |..
T Consensus       137 ~GDSGgpl~~~~-----~~vGi~s~g~~~c~~  163 (186)
T 2pfe_A          137 GGDSGGPWLTGS-----QAQGVTSGGTGDCRS  163 (186)
T ss_dssp             TTCTTCEEEETT-----EEEEEEEEEEEETTT
T ss_pred             CCCccCeEEECC-----EEEEEEeecCCCCCC
Confidence            799999999754     68999999974 754

>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}

Probab=96.58  E-value=0.00088  Score=43.78  Aligned_cols=26  Identities=50%  Similarity=0.774  Sum_probs=22.0

Q ss_pred             cCCCCCceeeccCCCcEEEEEeeeeCcc-ccc
Q psy7307          83 KGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQ  113 (117)
Q Consensus        83 ~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~~  113 (117)
                      .+|||+||++.+     .++||+||+.+ |+.
T Consensus       134 ~GDSGgpl~~~~-----~~vGi~s~~~~~c~~  160 (189)
T 2ea3_A          134 PGDSGGSLLAGN-----QAQGVTSGGSGNCRT  160 (189)
T ss_dssp             TTCTTCEEEETT-----EEEEEEEEEEEETTT
T ss_pred             CCCccCeEEECC-----EEEEEEeecCCCCCC
Confidence            799999999754     79999999975 764

>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}

Probab=96.35  E-value=0.0047  Score=40.56  Aligned_cols=51  Identities=29%  Similarity=0.429  Sum_probs=32.2

Q ss_pred             CCcccCCCCCeeEEEcCCCcEEEEEEeecCCCC-CCCCceeeec-ccchHHHHhhcc
Q psy7307          29 RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGC-GKTPGVYVQV-NKYLRWIYNTAK   83 (117)
Q Consensus        29 ~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C-~~~p~~~t~v-~~~~~wi~~~~~   83 (117)
                      .+.|.|||||||++.  +++  ++||++++..- ......|... .....|++..+.
T Consensus       151 ~~~~~GdSGGPlv~~--~g~--lvGI~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~~  203 (210)
T 2as9_A          151 AYIEPGNSGSPVLNS--NNE--VIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIE  203 (210)
T ss_dssp             CCCCTTCTTCEEECT--TSC--EEEEECCSCCCTTCSSEEEEECCHHHHHHHHTTCC
T ss_pred             CccCCCCccCcEECC--CCe--EEEEEecccccCCccccccEEEcHHHHHHHHHhhh
Confidence            568999999999964  354  89999998432 2111224432 445566665543

>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A

Probab=96.31  E-value=0.0011  Score=44.66  Aligned_cols=28  Identities=29%  Similarity=0.325  Sum_probs=22.6

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCcc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG  110 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~  110 (117)
                      .++|.|||||||+...  +  .|+||+||+..
T Consensus       179 ~~~~~GdSGGPlv~~~--g--~lvGI~s~g~~  206 (246)
T 1qtf_A          179 GYTEVGNSGSGIFNLK--G--ELIGIHSGKGG  206 (246)
T ss_dssp             SCCCGGGTTCEEECTT--C--CEEEEEEEEET
T ss_pred             CCCCCCCchhheECCC--C--EEEEEEecccc
Confidence            4789999999999632  2  58999999864

>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}

Probab=96.06  E-value=0.0026  Score=41.45  Aligned_cols=26  Identities=42%  Similarity=0.715  Sum_probs=21.7

Q ss_pred             cCCCCCceeeccCCCcEEEEEeeeeCcc-ccc
Q psy7307          83 KGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQ  113 (117)
Q Consensus        83 ~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~~  113 (117)
                      .+|||+||++.+     .++||+||+.+ |..
T Consensus       140 ~GDSGgpl~~~~-----~~vGi~s~~~~~~~~  166 (188)
T 2oua_A          140 PGDSGGSFISGT-----QAQGVTSGGSGNCRT  166 (188)
T ss_dssp             TTCTTCEEEETT-----EEEEEEEEEEEETTT
T ss_pred             CCCccceEEECC-----EEEEEEeccCCCCCC
Confidence            799999999754     79999999874 754

>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}

Probab=96.04  E-value=0.0029  Score=41.17  Aligned_cols=38  Identities=37%  Similarity=0.575  Sum_probs=28.6

Q ss_pred             cCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC-CCceeeecccch
Q psy7307          33 TGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK-TPGVYVQVNKYL   75 (117)
Q Consensus        33 ~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~-~p~~~t~v~~~~   75 (117)
                      .||||+||++.   +  .++||++++. .|.. .+.+|+++...+
T Consensus       137 ~GDSGgpl~~~---~--~~vGi~s~g~~~c~~~~~~~~~pi~~~l  176 (186)
T 2pfe_A          137 GGDSGGPWLTG---S--QAQGVTSGGTGDCRSGGITFFQPINPLL  176 (186)
T ss_dssp             TTCTTCEEEET---T--EEEEEEEEEEEETTTEEEEEEEEHHHHH
T ss_pred             CCCccCeEEEC---C--EEEEEEeecCCCCCCCCcEEEEEHHHHH
Confidence            69999999963   4  3899999974 3765 667888876544

>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A

Probab=95.21  E-value=0.0073  Score=40.60  Aligned_cols=28  Identities=21%  Similarity=0.259  Sum_probs=22.4

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCC
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI   59 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~   59 (117)
                      ..+.|.|||||||+..  .++  ++||++++.
T Consensus       178 ~~~~~~GdSGGPlv~~--~g~--lvGI~s~g~  205 (246)
T 1qtf_A          178 FGYTEVGNSGSGIFNL--KGE--LIGIHSGKG  205 (246)
T ss_dssp             ESCCCGGGTTCEEECT--TCC--EEEEEEEEE
T ss_pred             eCCCCCCCchhheECC--CCE--EEEEEeccc
Confidence            3578999999999963  354  899999974

>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A

Probab=94.10  E-value=0.02  Score=38.15  Aligned_cols=26  Identities=38%  Similarity=0.649  Sum_probs=20.7

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      ..+.|||||||+..+  +  .++||+|++.
T Consensus       177 ~~~~GdSGGPLv~~~--G--~vvGI~s~~~  202 (237)
T 3k6y_A          177 DVEQGDSGGPLIDLN--G--QVLGVVFGAA  202 (237)
T ss_dssp             CCCTTCTTCEEECTT--S--CEEEEEEEEC
T ss_pred             ccCCCccHHHEECCC--C--EEEEEEEeec
Confidence            567899999999642  2  4899999964

>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A

Probab=93.84  E-value=0.023  Score=37.89  Aligned_cols=26  Identities=27%  Similarity=0.539  Sum_probs=20.1

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      ..+.|+|||||+..+  +  .++||+||+.
T Consensus       183 ~i~~G~SGGPLv~~~--G--~vVGI~s~~~  208 (231)
T 3tjo_A          183 IINYGNAGGPLVNLD--G--EVIGINTLKV  208 (231)
T ss_dssp             CCCTTTTTSEEECTT--S--CEEEEEEEEE
T ss_pred             CcCCCCchhHeecCC--C--eEEEEEeEEe
Confidence            456799999999532  2  5899999975

>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1

Probab=93.76  E-value=0.035  Score=37.34  Aligned_cols=28  Identities=32%  Similarity=0.498  Sum_probs=22.0

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCcc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG  110 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~  110 (117)
                      ...+.|+|||||+...  +  .++||+||+..
T Consensus       176 a~i~~G~SGGPLv~~~--G--~vvGI~s~~~~  203 (239)
T 1l1j_A          176 AAINPGNSGGPLLNIH--G--EVIGINTAIVN  203 (239)
T ss_dssp             SCCCTTTTTSEEECSS--S--EEEEEECCCSC
T ss_pred             CCCCCCCccHHhccCC--C--eEEEEEeeeec
Confidence            3568999999999632  2  69999999763

>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A

Probab=93.34  E-value=0.041  Score=36.75  Aligned_cols=26  Identities=23%  Similarity=0.510  Sum_probs=20.3

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      ..+.|+|||||+...  +  .++||+||+.
T Consensus       170 ~i~~G~SGGPlv~~~--G--~vvGI~s~~~  195 (237)
T 3lgi_A          170 SINHGNSGGALVNSL--G--ELMGINTLSF  195 (237)
T ss_dssp             CCCTTCTTCEEECTT--C--CEEEEECCCC
T ss_pred             ccCCCCchHHeeCCC--C--eEEEEEeeee
Confidence            457899999999642  2  4899999964

>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}

Probab=93.09  E-value=0.04  Score=35.75  Aligned_cols=37  Identities=35%  Similarity=0.565  Sum_probs=27.0

Q ss_pred             cCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC-CCceeeecccc
Q psy7307          33 TGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK-TPGVYVQVNKY   74 (117)
Q Consensus        33 ~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~-~p~~~t~v~~~   74 (117)
                      .||||+||+..   +  .++||.+++. .|.. .+++|+++...
T Consensus       140 ~GDSGgpl~~~---~--~~vGi~s~~~~~~~~~~~~~~~pi~~~  178 (188)
T 2oua_A          140 PGDSGGSFISG---T--QAQGVTSGGSGNCRTGGTTFYQEVNPM  178 (188)
T ss_dssp             TTCTTCEEEET---T--EEEEEEEEEEEETTTEEEEEEEESHHH
T ss_pred             CCCccceEEEC---C--EEEEEEeccCCCCCCCCceEEEEHHHH
Confidence            69999999953   4  3899999874 3764 55677776544

>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...

Probab=92.83  E-value=0.047  Score=35.70  Aligned_cols=22  Identities=41%  Similarity=0.599  Sum_probs=18.5

Q ss_pred             cCCCCCcee-eccCCCcEEEEEeeeeCc
Q psy7307          83 KGDSGGPLL-LQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        83 ~gdsg~pl~-~~~~~~~~~l~Gi~s~~~  109 (117)
                      .||||+||+ ..+     .++||+|++.
T Consensus       140 ~GDSGGPl~~~~g-----~~vGI~s~~~  162 (198)
T 2h5c_A          140 RGDSGGSWITSAG-----QAQGVMSGGN  162 (198)
T ss_dssp             TTCTTCEEECTTC-----BEEEEEEEEC
T ss_pred             CCcceeEEEeeCC-----EEEEEEEeec
Confidence            799999999 443     6899999985

>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A

Probab=92.80  E-value=0.14  Score=33.93  Aligned_cols=27  Identities=41%  Similarity=0.669  Sum_probs=21.8

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecC
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG   58 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~   58 (117)
                      ....|.|||||||++.  +++  ++||+++.
T Consensus       175 ~~~~~~GdSGGPLv~~--~G~--vvGI~s~~  201 (237)
T 3k6y_A          175 RADVEQGDSGGPLIDL--NGQ--VLGVVFGA  201 (237)
T ss_dssp             ESCCCTTCTTCEEECT--TSC--EEEEEEEE
T ss_pred             cCccCCCccHHHEECC--CCE--EEEEEEee
Confidence            3568999999999964  365  89999886

>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A

Probab=92.53  E-value=0.053  Score=37.87  Aligned_cols=27  Identities=30%  Similarity=0.362  Sum_probs=21.5

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      ...+.|||||||+...  +  .++||+||+.
T Consensus       162 ~~~~~G~SGGPlv~~~--G--~vvGI~s~~~  188 (324)
T 1y8t_A          162 AAINPGNSGGALVNMN--A--QLVGVNSAIA  188 (324)
T ss_dssp             SCCCTTCTTEEEECTT--S--EEEEEEEEEC
T ss_pred             CCCCCCCccCcEECCC--C--eEEEEEeeec
Confidence            3568999999999742  2  6999999964

>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1

Probab=91.81  E-value=0.11  Score=34.80  Aligned_cols=50  Identities=22%  Similarity=0.410  Sum_probs=31.3

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC---CCceeeecccchHHHHhhc
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK---TPGVYVQVNKYLRWIYNTA   82 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~---~p~~~t~v~~~~~wi~~~~   82 (117)
                      +...|.|+||+||+..  +++  ++||.++... ..   ..+....+.....++.+..
T Consensus       175 da~i~~G~SGGPLv~~--~G~--vvGI~s~~~~-~~~~~g~~faIP~~~~~~~~~~l~  227 (239)
T 1l1j_A          175 DAAINPGNSGGPLLNI--HGE--VIGINTAIVN-PQEAVNLGFAIPINTVKKFLDTIL  227 (239)
T ss_dssp             SSCCCTTTTTSEEECS--SSE--EEEEECCCSC-CCSCCSCEEEEEHHHHHHHHGGGC
T ss_pred             CCCCCCCCccHHhccC--CCe--EEEEEeeeec-CCCcCceEEEEEHHHHHHHHHHHH
Confidence            4578999999999964  354  8999998743 21   1122334444555555543

>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}

Probab=91.58  E-value=0.17  Score=35.69  Aligned_cols=51  Identities=24%  Similarity=0.320  Sum_probs=33.8

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccchHHHHhhc
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYLRWIYNTA   82 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~~~wi~~~~   82 (117)
                      ....|.|+|||||++.  +++  ++||.++.. .+..  ..+....+.....|+.+..
T Consensus       172 da~i~~G~SGGPLvn~--~G~--vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~  225 (348)
T 3qo6_A          172 DAAINPGNSGGPLLDS--SGT--LIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLV  225 (348)
T ss_dssp             CSCCCTTCTTCEEECT--TSC--EEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHH
T ss_pred             eCCcCCCCcHHHhhCC--CCe--EEEEEEeeecCCCCcccEEEEEEecchHHHHHHHH
Confidence            4578999999999964  365  899998853 2322  2344455666667776554

>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}

Probab=91.05  E-value=0.1  Score=36.93  Aligned_cols=26  Identities=38%  Similarity=0.544  Sum_probs=20.5

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      ..+.|+|||||+...  +  .++||+||+.
T Consensus       174 ~i~~G~SGGPLvn~~--G--~vvGI~s~~~  199 (348)
T 3qo6_A          174 AINPGNSGGPLLDSS--G--TLIGINTAIY  199 (348)
T ss_dssp             CCCTTCTTCEEECTT--S--CEEEEEEEEE
T ss_pred             CcCCCCcHHHhhCCC--C--eEEEEEEeee
Confidence            567899999999642  2  4899999975

>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A

Probab=91.01  E-value=0.17  Score=33.70  Aligned_cols=28  Identities=21%  Similarity=0.463  Sum_probs=22.1

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCC
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI   59 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~   59 (117)
                      ....|.|+||+||+..  +++  ++||.++..
T Consensus       168 d~~i~~G~SGGPlv~~--~G~--vvGI~s~~~  195 (237)
T 3lgi_A          168 DASINHGNSGGALVNS--LGE--LMGINTLSF  195 (237)
T ss_dssp             CSCCCTTCTTCEEECT--TCC--EEEEECCCC
T ss_pred             cCccCCCCchHHeeCC--CCe--EEEEEeeee
Confidence            4467999999999964  465  899999863

>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A

Probab=90.95  E-value=0.09  Score=36.87  Aligned_cols=26  Identities=27%  Similarity=0.539  Sum_probs=19.9

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      ..+.|+|||||+..+  +  .++||+||+.
T Consensus       166 ~i~~G~SGGPlv~~~--G--~vvGI~s~~~  191 (332)
T 3num_A          166 IINYGNAGGPLVNLD--G--EVIGINTLKV  191 (332)
T ss_dssp             CCCTTTTTSEEEETT--S--CEEEEEEEEE
T ss_pred             CcCCCCcHHHhhCCC--C--cEEEEEeeEe
Confidence            345699999999642  2  4899999975

>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A

Probab=90.73  E-value=0.16  Score=33.79  Aligned_cols=27  Identities=30%  Similarity=0.587  Sum_probs=21.4

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecC
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG   58 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~   58 (117)
                      ....|.|+|||||+..  +++  ++||.++.
T Consensus       181 da~i~~G~SGGPLv~~--~G~--vVGI~s~~  207 (231)
T 3tjo_A          181 DAIINYGNAGGPLVNL--DGE--VIGINTLK  207 (231)
T ss_dssp             SSCCCTTTTTSEEECT--TSC--EEEEEEEE
T ss_pred             cCCcCCCCchhHeecC--CCe--EEEEEeEE
Confidence            3457889999999954  365  89999986

>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A

Probab=90.71  E-value=0.12  Score=36.05  Aligned_cols=26  Identities=23%  Similarity=0.510  Sum_probs=21.0

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      ..+.|+|||||+...  +  .++||++|+.
T Consensus       159 ~~~~G~SGGPl~~~~--G--~vvGI~s~~~  184 (318)
T 1te0_A          159 SINHGNSGGALVNSL--G--ELMGINTLSF  184 (318)
T ss_dssp             CCCTTTTTSEEECTT--C--CEEEEEECCS
T ss_pred             CCCCCCCcCceECCC--C--eEEEEEeeee
Confidence            568899999999742  2  5899999975

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1

Probab=90.01  E-value=0.14  Score=35.89  Aligned_cols=27  Identities=30%  Similarity=0.508  Sum_probs=21.1

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      ...+.|+|||||+..+  +  .++||++|+.
T Consensus       166 ~~~~~G~SGGPl~~~~--G--~vVGI~s~~~  192 (325)
T 1lcy_A          166 AAIDFGNAGGPLVNLD--G--EVIGVNTMKV  192 (325)
T ss_dssp             SCCSTTTTTSEEEETT--S--CEEEEEEEEE
T ss_pred             CCCCCCCccccEECCC--C--EEEEEEeEee
Confidence            3568999999999642  2  5899999874

>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}

Probab=89.66  E-value=0.18  Score=34.05  Aligned_cols=26  Identities=31%  Similarity=0.516  Sum_probs=20.1

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      ..+.|+|||||+...  +  .++||+||..
T Consensus       181 ~i~~G~SGGPLvn~~--G--~vVGI~s~~~  206 (245)
T 3sti_A          181 SINRGNSGGALLNLN--G--ELIGINTAIL  206 (245)
T ss_dssp             CCCTTTTTSEEECTT--S--CEEEEEECCC
T ss_pred             CcCCCcchhHeecCC--C--eEEEEEEeEE
Confidence            456899999999532  2  5999999964

>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A

Probab=88.92  E-value=0.2  Score=34.86  Aligned_cols=27  Identities=33%  Similarity=0.474  Sum_probs=21.7

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecC
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG   58 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~   58 (117)
                      ....|.|+|||||++.  +++  ++||.++.
T Consensus       161 d~~~~~G~SGGPlv~~--~G~--vvGI~s~~  187 (324)
T 1y8t_A          161 DAAINPGNSGGALVNM--NAQ--LVGVNSAI  187 (324)
T ss_dssp             CSCCCTTCTTEEEECT--TSE--EEEEEEEE
T ss_pred             cCCCCCCCccCcEECC--CCe--EEEEEeee
Confidence            3568999999999965  354  89999885

>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A

Probab=88.36  E-value=0.36  Score=33.57  Aligned_cols=28  Identities=21%  Similarity=0.463  Sum_probs=22.4

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCC
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI   59 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~   59 (117)
                      ....|.|+||+||+..  +++  ++||.++..
T Consensus       157 d~~~~~G~SGGPl~~~--~G~--vvGI~s~~~  184 (318)
T 1te0_A          157 DASINHGNSGGALVNS--LGE--LMGINTLSF  184 (318)
T ss_dssp             SSCCCTTTTTSEEECT--TCC--EEEEEECCS
T ss_pred             CCCCCCCCCcCceECC--CCe--EEEEEeeee
Confidence            3567999999999964  365  899999873

>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A

Probab=88.01  E-value=1.2  Score=36.09  Aligned_cols=63  Identities=25%  Similarity=0.536  Sum_probs=40.2

Q ss_pred             CCcccCCCCCeeEEEc-CCCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhccCCCCCceeec
Q psy7307          29 RQAQTGDSGGPLLLQR-PDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQ   93 (117)
Q Consensus        29 ~~~C~~dsG~pl~~~~-~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~gdsg~pl~~~   93 (117)
                      .-.=.||||+||+..+ ...+|+++|+.+.+..-.-....|.-+.  .+|+.+..+.|...++...
T Consensus       200 ~~~~~GDSGSPlF~yD~~~kKWvLvGv~s~g~~~g~~~~~~~~~~--~~f~~~~~~~d~~~~i~~~  263 (1048)
T 1wxr_A          200 IYGEAGDSGSPLFAFDTVQNKWVLVGVLTAGNGAGGRGNNWAVIP--LDFIGQKFNEDNDAPVTFR  263 (1048)
T ss_dssp             CBCCTTCTTCEEEEEETTTTEEEEEEEEEEESSTTCSCEEEEECC--HHHHHHHHHTTBCCCEECC
T ss_pred             CCCCCCCCCCeeeEEEcCCCeEEEEEEecccccCCcccceEEEeC--HHHhhhhhhcccccceecc
Confidence            3445799999997543 3689999999873311010112232222  3777888888998888654

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1

Probab=87.63  E-value=0.42  Score=33.37  Aligned_cols=26  Identities=35%  Similarity=0.624  Sum_probs=21.3

Q ss_pred             CCcccCCCCCeeEEEcCCCcEEEEEEeecC
Q psy7307          29 RQAQTGDSGGPLLLQRPDKQWTIIGVVSWG   58 (117)
Q Consensus        29 ~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~   58 (117)
                      ...|.|+|||||+..  +++  ++||.++.
T Consensus       166 ~~~~~G~SGGPl~~~--~G~--vVGI~s~~  191 (325)
T 1lcy_A          166 AAIDFGNAGGPLVNL--DGE--VIGVNTMK  191 (325)
T ss_dssp             SCCSTTTTTSEEEET--TSC--EEEEEEEE
T ss_pred             CCCCCCCccccEECC--CCE--EEEEEeEe
Confidence            567999999999965  365  89998876

>3syj_A Adhesion and penetration protein autotransporter; bacterial aggregation and biofilm formation, SELF-associatin autotransporter (SAAT); 2.20A {Haemophilus influenzae}

Probab=87.60  E-value=0.99  Score=36.31  Aligned_cols=67  Identities=16%  Similarity=0.266  Sum_probs=39.5

Q ss_pred             CcccCCCCCeeEEE-cCCCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhccCCCCCceeeccCCCc
Q psy7307          30 QAQTGDSGGPLLLQ-RPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQ   98 (117)
Q Consensus        30 ~~C~~dsG~pl~~~-~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~   98 (117)
                      -.=.||||+||+.- ....+|+++|+...+.....+...|..  ...+|+.+..+.|...++......+.
T Consensus       212 yg~~GDSGSPLFayD~~~~KWvl~Gv~~~~~~~~g~~n~~~i--~~~~f~~~~~~~D~~~~~~~~~~~~~  279 (1011)
T 3syj_A          212 AGSKGDSGSPMFIYDAEKQKWLINGILREGNPFEGKENGFQL--VRKSYFDEIFERDLHTSLYTRAGNGV  279 (1011)
T ss_dssp             BCCTTCTTCEEEEEETTTTEEEEEEEECC--------EEEEE--CCHHHHHHHHHHHCCEEEECTTSCCE
T ss_pred             CCCCCCCCCcceeeEcCCCeEEEEEEeeccccccCcccceEE--echHHhhhhhhccccccccccCCCce
Confidence            34578999999654 346899999999764212111112322  22478888888888877754333343

>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}

Probab=85.91  E-value=0.57  Score=31.52  Aligned_cols=28  Identities=29%  Similarity=0.489  Sum_probs=21.9

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCC
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI   59 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~   59 (117)
                      ....|.|+||+||+..  +++  ++||.++..
T Consensus       179 da~i~~G~SGGPLvn~--~G~--vVGI~s~~~  206 (245)
T 3sti_A          179 DASINRGNSGGALLNL--NGE--LIGINTAIL  206 (245)
T ss_dssp             SSCCCTTTTTSEEECT--TSC--EEEEEECCC
T ss_pred             cCCcCCCcchhHeecC--CCe--EEEEEEeEE
Confidence            3467899999999954  365  999998863

>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A

Probab=85.18  E-value=0.67  Score=32.36  Aligned_cols=26  Identities=31%  Similarity=0.603  Sum_probs=20.8

Q ss_pred             CCcccCCCCCeeEEEcCCCcEEEEEEeecC
Q psy7307          29 RQAQTGDSGGPLLLQRPDKQWTIIGVVSWG   58 (117)
Q Consensus        29 ~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~   58 (117)
                      ...|.|+|||||++.  +++  ++||.++.
T Consensus       165 ~~i~~G~SGGPlv~~--~G~--vvGI~s~~  190 (332)
T 3num_A          165 AIINYGNAGGPLVNL--DGE--VIGINTLK  190 (332)
T ss_dssp             SCCCTTTTTSEEEET--TSC--EEEEEEEE
T ss_pred             CCcCCCCcHHHhhCC--CCc--EEEEEeeE
Confidence            456789999999965  365  89999886

>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A

Probab=83.20  E-value=0.87  Score=36.93  Aligned_cols=27  Identities=33%  Similarity=0.764  Sum_probs=22.0

Q ss_pred             hhccCCCCCceeecc-CCCcEEEEEeee
Q psy7307          80 NTAKGDSGGPLLLQR-PDKQWTIIGVVS  106 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~-~~~~~~l~Gi~s  106 (117)
                      ....||||+||...+ ..+.|+|+|+.|
T Consensus       201 ~~~~GDSGSPlF~yD~~~kKWvLvGv~s  228 (1048)
T 1wxr_A          201 YGEAGDSGSPLFAFDTVQNKWVLVGVLT  228 (1048)
T ss_dssp             BCCTTCTTCEEEEEETTTTEEEEEEEEE
T ss_pred             CCCCCCCCCeeeEEEcCCCeEEEEEEec
Confidence            345699999997765 467899999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	117
g1rtf.1	260	b.47.1.2 (A:,B:) Two-chain tissue plasminogen acti	2e-12
g1rtf.1	260	b.47.1.2 (A:,B:) Two-chain tissue plasminogen acti	3e-06
d1rjxb_	247	b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Hum	5e-12
d1rjxb_	247	b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Hum	1e-05
g1fiw.1	274	b.47.1.2 (L:,A:) Beta-acrosin {Sheep (Ovis aries)	6e-12
g1fiw.1	274	b.47.1.2 (L:,A:) Beta-acrosin {Sheep (Ovis aries)	5e-06
g1h8d.1	289	b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [T	6e-12
g1h8d.1	289	b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [T	1e-05
d1fi8a_	227	b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus)	7e-12
d1fi8a_	227	b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus)	4e-04
d3rp2a_	224	b.47.1.2 (A:) Chymase II (mast cell proteinase II)	1e-11
d3rp2a_	224	b.47.1.2 (A:) Chymase II (mast cell proteinase II)	4e-04
d1eaxa_	241	b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapien	1e-11
d1eaxa_	241	b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapien	9e-06
g1gj7.1	256	b.47.1.2 (A:,B:) Urokinase-type plasminogen activa	1e-11
g1gj7.1	256	b.47.1.2 (A:,B:) Urokinase-type plasminogen activa	7e-06
d2fpza1	243	b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sap	2e-11
d2fpza1	243	b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sap	7e-05
d1rrka1	287	b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens	2e-11
d1rrka1	287	b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens	8e-07
d1os8a_	223	b.47.1.1 (A:) Trypsin {Streptomyces griseus, strai	2e-11
d1os8a_	223	b.47.1.1 (A:) Trypsin {Streptomyces griseus, strai	2e-04
d1eufa_	224	b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId:	3e-11
d1elva1	259	b.47.1.2 (A:410-668) Complement C1S protease, cata	5e-11
d1elva1	259	b.47.1.2 (A:410-668) Complement C1S protease, cata	3e-04
d1nn6a_	224	b.47.1.2 (A:) Chymase (mast cell protease I) {Huma	7e-11
d1nn6a_	224	b.47.1.2 (A:) Chymase (mast cell protease I) {Huma	0.002
d1fq3a_	227	b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [Ta	8e-11
d1fq3a_	227	b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [Ta	0.003
d1rfna_	235	b.47.1.2 (A:) Coagulation factor IXa, protease dom	8e-11
d1rfna_	235	b.47.1.2 (A:) Coagulation factor IXa, protease dom	2e-04
d1t32a1	224	b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapie	8e-11
d2qy0b1	240	b.47.1.2 (B:447-686) Complement C1R protease, cata	1e-10
d2qy0b1	240	b.47.1.2 (B:447-686) Complement C1R protease, cata	0.002
d1z8ga1	255	b.47.1.2 (A:163-417) Hepsin, catalytic domain {Hum	2e-10
d1z8ga1	255	b.47.1.2 (A:163-417) Hepsin, catalytic domain {Hum	0.004
g1gg6.1	238	b.47.1.2 (A:,B:,C:) (alpha,gamma)-chymotrypsin(oge	2e-10
g1gg6.1	238	b.47.1.2 (A:,B:,C:) (alpha,gamma)-chymotrypsin(oge	3e-04
d2bz6h1	254	b.47.1.2 (H:16-257) Coagulation factor VIIa {Human	2e-10
d2bz6h1	254	b.47.1.2 (H:16-257) Coagulation factor VIIa {Human	0.004
d2f91a1	237	b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed c	3e-10
d2f91a1	237	b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed c	2e-04
d1si5h_	234	b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human	4e-10
d1si5h_	234	b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human	0.001
d1xx9a_	237	b.47.1.2 (A:) Coagulation factor XI {Human (Homo s	5e-10
d1xx9a_	237	b.47.1.2 (A:) Coagulation factor XI {Human (Homo s	6e-04
d2p3ub1	233	b.47.1.2 (B:16-243) Coagulation factor Xa, proteas	7e-10
d2p3ub1	233	b.47.1.2 (B:16-243) Coagulation factor Xa, proteas	5e-04
d1autc_	240	b.47.1.2 (C:) Activated protein c (autoprothrombin	7e-10
d1autc_	240	b.47.1.2 (C:) Activated protein c (autoprothrombin	5e-04
d1ekbb_	235	b.47.1.2 (B:) Enteropeptidase (enterokinase light	8e-10
d1ekbb_	235	b.47.1.2 (B:) Enteropeptidase (enterokinase light	5e-04
d1pytd_	251	b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Co	8e-10
d1pytd_	251	b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Co	7e-04
d1j16a_	223	b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicu	9e-10
d1j16a_	223	b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicu	0.002
d1gdna_	224	b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxyspo	1e-09
d1gdna_	224	b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxyspo	8e-04
d1fxya_	228	b.47.1.2 (A:) Coagulation factor Xa-trypsin chimer	1e-09
d1brup_	241	b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9	1e-09
d1brup_	241	b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9	0.002
d1fona_	232	b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III	3e-09
d1fona_	232	b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III	0.004
d1mzaa_	240	b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [Ta	3e-09
d1mzaa_	240	b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [Ta	2e-04
d1a7sa_	225	b.47.1.2 (A:) Heparin binding protein, HBP {Human	4e-09
d1eq9a_	222	b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Re	1e-08
d1hj9a_	223	b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [Tax	2e-08
d1ao5a_	237	b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus)	3e-08
d1p3ca_	215	b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus int	4e-08
d1p3ca_	215	b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus int	7e-04
d1hj8a_	222	b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon	5e-08
d1gvza_	237	b.47.1.2 (A:) Prostate specific antigen (PSA kalli	6e-08
d1lo6a_	221	b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [	6e-08
d1npma_	225	b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [Tax	7e-08
d1op0a_	234	b.47.1.2 (A:) Venom serine protease {Hundred-pace	7e-08
d1sgfa_	228	b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus	8e-08
d1q3xa1	242	b.47.1.2 (A:445-686) Mannan-binding lectin serine	1e-07
d1gvkb_	240	b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9	1e-07
d1orfa_	232	b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [Ta	1e-07
d1azza_	226	b.47.1.2 (A:) Crab collagenase {Atlantic sand fidd	1e-07
d1tona_	235	b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 1	2e-07
d1m9ua_	241	b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [Tax	3e-07
g2pka.1	232	b.47.1.2 (A:,B:) Kallikrein A {Pig (Sus scrofa) [T	3e-07
d1bioa_	228	b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxI	7e-07
d1fuja_	221	b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapie	7e-07
d1hpga_	187	b.47.1.1 (A:) Glutamic acid-specific protease {Str	9e-07
d2hlca_	230	b.47.1.2 (A:) HL collagenase {Common cattle grub (	2e-06
d1elta_	236	b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxI	3e-06
d2z7fe1	218	b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens)	7e-06
d1arba_	263	b.47.1.1 (A:) Achromobacter protease {Achromobacte	1e-05
d2o8la1	216	b.47.1.1 (A:1-216) V8 protease {Staphylococcus aur	2e-04

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 247

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (139), Expect = 5e-12
 Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 3/57 (5%)

Query: 31  AQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNTAKGD 85
           +  GDSGGPL+    DK + + GV SWG+GC +   PGVYV+V++++ WI    + +
Sbjct: 192 SCQGDSGGPLVCFEKDK-YILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMRNN 247

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 247

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (92), Expect = 1e-05
 Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)

Query: 74  YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +L    ++ +GDSGGPL+    DK + + GV SWG+GCA+
Sbjct: 185 HLAGGTDSCQGDSGGPLVCFEKDK-YILQGVTSWGLGCAR 223

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.4 bits (137), Expect = 7e-12
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 5/50 (10%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAK 83
           GDSGGPL+ +         G+VS+G   G TP  + +V+ +L WI  T K
Sbjct: 182 GDSGGPLVCK-----KVAAGIVSYGQNDGSTPRAFTKVSTFLSWIKKTMK 226

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.3 bits (82), Expect = 4e-04
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 5/53 (9%)

Query: 61  CGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
                          +    + +GDSGGPL+ +         G+VS+G     
Sbjct: 159 KNYFDKANEICAGDPKIKRASFRGDSGGPLVCK-----KVAAGIVSYGQNDGS 206

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 57.0 bits (136), Expect = 1e-11
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNT 81
           GDSGGPLL           G+VS+G    K P ++ +V+ Y+ WI   
Sbjct: 180 GDSGGPLLCA-----GVAHGIVSYGHPDAKPPAIFTRVSTYVPWINAV 222

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 36.2 bits (82), Expect = 4e-04
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 5/38 (13%)

Query: 76  RWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
             +     GDSGGPLL           G+VS+G   A+
Sbjct: 172 TTLRAAFMGDSGGPLLCA-----GVAHGIVSYGHPDAK 204

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (136), Expect = 1e-11
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 24  FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
           F      +  GDSGGPL     D +    GVVSWG GC +   PGVY ++  +  WI   
Sbjct: 179 FLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKEN 238

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (94), Expect = 9e-06
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query: 74  YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +L    ++ +GDSGGPL     D +    GVVSWG GCAQ
Sbjct: 179 FLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQ 218

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]} Length = 243

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (135), Expect = 2e-11
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 15  QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVN 72
           ++VR D      T R +  GDSGGPL+ +  +  W   GVVSWG GC +   PG+Y +V 
Sbjct: 173 RIVRDDMLCAGNTRRDSCQGDSGGPLVCKV-NGTWLQAGVVSWGEGCAQPNRPGIYTRVT 231

Query: 73  KYLRWIYNTAK 83
            YL WI++   
Sbjct: 232 YYLDWIHHYVP 242

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]} Length = 243

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (87), Expect = 7e-05
 Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 80  NTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           ++ +GDSGGPL+ +  +  W   GVVSWG GCAQ
Sbjct: 188 DSCQGDSGGPLVCKV-NGTWLQAGVVSWGEGCAQ 220

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 287

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (135), Expect = 2e-11
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 13/78 (16%)

Query: 21  YDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCG------------KTPGVY 68
             V          GDSGGPL++ +   ++  +GV+SWG+                    +
Sbjct: 207 GGVSPYADPNTCRGDSGGPLIVHK-RSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFH 265

Query: 69  VQVNKYLRWIYNTAKGDS 86
           + + + L W+    + + 
Sbjct: 266 INLFQVLPWLKEKLQDED 283

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 287

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (102), Expect = 8e-07
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 46  DKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVV 105
           D Q+         I    TP              NT +GDSGGPL++ +   ++  +GV+
Sbjct: 182 DAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHK-RSRFIQVGVI 240

Query: 106 SWGIGCA 112
           SWG+   
Sbjct: 241 SWGVVDV 247

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

 Score = 56.3 bits (134), Expect = 2e-11
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 25  NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNTA 82
           +        GDSGGP+  +    +W  +G+VSWG GC +   PGVY +V+ +   I + A
Sbjct: 161 DTGGVDTCQGDSGGPMFRKDNADEWIQVGIVSWGYGCARPGYPGVYTEVSTFASAIASAA 220

Query: 83  K 83
           +
Sbjct: 221 R 221

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

 Score = 37.0 bits (84), Expect = 2e-04
 Identities = 16/34 (47%), Positives = 24/34 (70%)

Query: 80  NTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +T +GDSGGP+  +    +W  +G+VSWG GCA+
Sbjct: 166 DTCQGDSGGPMFRKDNADEWIQVGIVSWGYGCAR 199

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.9 bits (133), Expect = 3e-11
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 5/49 (10%)

Query: 35  DSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAK 83
           DSGGPL+           G+VS+G   G TP VY +++ +L WI++T +
Sbjct: 181 DSGGPLVCN-----GVAQGIVSYGRNDGTTPDVYTRISSFLSWIHSTMR 224

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (132), Expect = 5e-11
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 25  NRTSRQAQTGDSGGPLLLQRPDK--QWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTA 82
                 +  GDSGG   +Q P+   ++   G+VSWG  CG T G+Y +V  Y+ WI  T 
Sbjct: 197 GEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCG-TYGLYTRVKNYVDWIMKTM 255

Query: 83  KGDS 86
           + +S
Sbjct: 256 QENS 259

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (82), Expect = 3e-04
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 80  NTAKGDSGGPLLLQRPDK--QWTIIGVVSWGIGCAQ 113
           ++ KGDSGG   +Q P+   ++   G+VSWG  C  
Sbjct: 202 DSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT 237

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (130), Expect = 7e-11
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)

Query: 32  QTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKG 84
             GDSGGPLL           G+VS+G    K P V+ +++ Y  WI    + 
Sbjct: 176 FKGDSGGPLLCA-----GVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQA 223

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (76), Expect = 0.002
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 5/40 (12%)

Query: 74  YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
             R   +  KGDSGGPLL           G+VS+G   A+
Sbjct: 168 NPRKTKSAFKGDSGGPLLCA-----GVAQGIVSYGRSDAK 202

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (130), Expect = 8e-11
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 32  QTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAK 83
             GDSGGPL+           G+VS+G   G  P    +V+ ++ WI  T K
Sbjct: 179 FKGDSGGPLVCN-----KVAQGIVSYGRNNGMPPRACTKVSSFVHWIKKTMK 225

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]} Length = 227

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (75), Expect = 0.003
 Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 5/40 (12%)

Query: 74  YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
                  + KGDSGGPL+           G+VS+G     
Sbjct: 171 DPEIKKTSFKGDSGGPLVCN-----KVAQGIVSYGRNNGM 205

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (130), Expect = 8e-11
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 24  FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
           F+   R +  GDSGGP + +       + G++SWG  C      G+Y +V++Y+ WI   
Sbjct: 173 FHEGGRDSCQGDSGGPHVTEVEG-TSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231

Query: 82  AK 83
            K
Sbjct: 232 TK 233

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (84), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 80  NTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           ++ +GDSGGP + +       + G++SWG  CA 
Sbjct: 179 DSCQGDSGGPHVTEVEG-TSFLTGIISWGEECAM 211

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (130), Expect = 8e-11
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAK 83
           + A  GDSGGPLL           G+VS+G   G  P V+ +V+ +L WI  T +
Sbjct: 174 KAAFKGDSGGPLLCN-----NVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRTTMR 223

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (128), Expect = 1e-10
 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 30  QAQTGDSGGPLLLQRPDK-QWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNT 81
            A  GDSGG   ++ P+  +W   G+VSWGIGC +  G Y +V  Y+ WI   
Sbjct: 185 DACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKE 237

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (76), Expect = 0.002
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 74  YLRWIYNTAKGDSGGPLLLQRPDK-QWTIIGVVSWGIGCAQ 113
           +     +  +GDSGG   ++ P+  +W   G+VSWGIGC++
Sbjct: 179 HPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR 219

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 255

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (128), Expect = 2e-10
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 24  FNRTSRQAQTGDSGGPLLLQRP---DKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWI 78
           +      A  GDSGGP + +       +W + G+VSWG GC     PGVY +V+ +  WI
Sbjct: 179 YPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWI 238

Query: 79  YNTAKGDSGGPLLLQR 94
           +   K  S    ++ +
Sbjct: 239 FQAIKTHSEASGMVTQ 254

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 255

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (75), Expect = 0.004
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)

Query: 80  NTAKGDSGGPLLLQRP---DKQWTIIGVVSWGIGCAQ 113
           +  +GDSGGP + +       +W + G+VSWG GCA 
Sbjct: 185 DACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCAL 221

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (127), Expect = 2e-10
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 28  SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNTAKGD 85
           S+ +  GDSGGP         W + G+VSWG GC      GVY +V++Y+ W+    + +
Sbjct: 184 SKDSCKGDSGGPHATHY-RGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSE 242

Query: 86  SGGPLLLQRP 95
               +LL+ P
Sbjct: 243 PRPGVLLRAP 252

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (74), Expect = 0.004
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 80  NTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           ++ KGDSGGP         W + G+VSWG GCA 
Sbjct: 186 DSCKGDSGGPHATHY-RGTWYLTGIVSWGQGCAT 218

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

 Score = 53.1 bits (126), Expect = 3e-10
 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNTA 82
           + +  GDSGGPL          + G+VSWG GC +   PGVY +V+ ++ WI   A
Sbjct: 182 KDSCQGDSGGPLAASDTG-STYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKANA 236

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

 Score = 36.9 bits (84), Expect = 2e-04
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 74  YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
                 ++ +GDSGGPL          + G+VSWG GCA+
Sbjct: 177 VPEGGKDSCQGDSGGPLAASDTG-STYLAGIVSWGYGCAR 215

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (125), Expect = 4e-10
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
                GD GGPL+ ++      ++GV+  G GC     PG++V+V  Y +WI+  
Sbjct: 172 SGPCEGDYGGPLVCEQHK-MRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKI 225

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (78), Expect = 0.001
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 80  NTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
              +GD GGPL+ ++      ++GV+  G GCA 
Sbjct: 173 GPCEGDYGGPLVCEQHK-MRMVLGVIVPGRGCAI 205

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (124), Expect = 5e-10
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 24  FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
           +    + A  GDSGGPL  +  ++ W ++G+ SWG GC +   PGVY  V +Y+ WI   
Sbjct: 176 YREGGKDACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 234

Query: 82  AK 83
            +
Sbjct: 235 TQ 236

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (80), Expect = 6e-04
 Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 80  NTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           +  KGDSGGPL  +  ++ W ++G+ SWG GCAQ
Sbjct: 182 DACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQ 214

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 233

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (124), Expect = 7e-10
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNTAK 83
             A  GDSGGP + +  D  + + G+VSWG GC +    G+Y +V  +L+WI  + K
Sbjct: 178 EDACQGDSGGPHVTRFKD-TYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK 233

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 233

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (81), Expect = 5e-04
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 77  WIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
              +  +GDSGGP + +  D  + + G+VSWG GCA+
Sbjct: 176 KQEDACQGDSGGPHVTRFKD-TYFVTGIVSWGEGCAR 211

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (123), Expect = 7e-10
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 3/53 (5%)

Query: 33  TGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNTAK 83
            GDSGGP++       W ++G+VSWG GCG     GVY +V++YL WI+   +
Sbjct: 188 EGDSGGPMVASF-HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIR 239

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (81), Expect = 5e-04
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 74  YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
            L    +  +GDSGGP++       W ++G+VSWG GC  
Sbjct: 179 ILGDRQDACEGDSGGPMVASF-HGTWFLVGLVSWGEGCGL 217

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 52.0 bits (123), Expect = 8e-10
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
             +  GDSGGPL+ Q  + +W + GV S+G  C     PGVY +V ++  WI + 
Sbjct: 180 VDSCQGDSGGPLMCQE-NNRWLLAGVTSFGYQCALPNRPGVYARVPRFTEWIQSF 233

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.8 bits (81), Expect = 5e-04
 Identities = 19/104 (18%), Positives = 33/104 (31%), Gaps = 1/104 (0%)

Query: 10  ICAAHQLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYV 69
           IC   +            +        G    + +      +                 +
Sbjct: 111 ICLPEENQVFPPGRICSIAGWGALIYQGSTADVLQEADVPLLSNEKCQQQMPEYNITENM 170

Query: 70  QVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
               Y     ++ +GDSGGPL+ Q  + +W + GV S+G  CA 
Sbjct: 171 VCAGYEAGGVDSCQGDSGGPLMCQE-NNRWLLAGVTSFGYQCAL 213

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 251

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 52.1 bits (123), Expect = 8e-10
 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 5/59 (8%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCG----KTPGVYVQVNKYLRWIYNTAK 83
             A  GDSGGPL  Q  D QW + G+VS+G G      K P V+ +V+ Y+ WI    +
Sbjct: 193 ISACNGDSGGPLNCQA-DGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKLQ 250

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 251

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.5 bits (80), Expect = 7e-04
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 80  NTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCA 112
           +   GDSGGPL  Q  D QW + G+VS+G G +
Sbjct: 194 SACNGDSGGPLNCQA-DGQWDVRGIVSFGSGLS 225

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.9 bits (123), Expect = 9e-10
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 7/63 (11%)

Query: 24  FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
           F    + A  GDSGGP++         + G+VSWG GC     PGVY +V  Y+ WI +T
Sbjct: 165 FLEGGKDACQGDSGGPVVCN-----GELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDT 219

Query: 82  AKG 84
              
Sbjct: 220 IAA 222

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 33.8 bits (76), Expect = 0.002
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 9/75 (12%)

Query: 43  QRPDKQWTIIGVVSWGIGCGKTPGVYVQVNK----YLRWIYNTAKGDSGGPLLLQRPDKQ 98
             PD    +   +     C  +    +  N     +L    +  +GDSGGP++       
Sbjct: 130 NEPDLLQCLDAPLLPQADCEASSSFIITDNMVCVGFLEGGKDACQGDSGGPVVCN----- 184

Query: 99  WTIIGVVSWGIGCAQ 113
             + G+VSWG GCA 
Sbjct: 185 GELQGIVSWGYGCAL 199

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

 Score = 51.6 bits (122), Expect = 1e-09
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 24  FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
            +   + +  GDSGGP++    D   T+IG VSWG GC +    GVY  V     +I   
Sbjct: 168 VSSGGKDSCQGDSGGPIV----DSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDTY 223

Query: 82  A 82
           A
Sbjct: 224 A 224

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

 Score = 35.1 bits (79), Expect = 8e-04
 Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 4/34 (11%)

Query: 80  NTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
           ++ +GDSGGP++    D   T+IG VSWG GCA+
Sbjct: 174 DSCQGDSGGPIV----DSSNTLIGAVSWGNGCAR 203

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

 Score = 51.6 bits (122), Expect = 1e-09
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 7/65 (10%)

Query: 24  FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
           F    + +  GDSGGP++         + GVVSWG GC +   PGVY +V  Y++WI NT
Sbjct: 169 FLEGGKDSCQGDSGGPVVCN-----GQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNT 223

Query: 82  AKGDS 86
              +S
Sbjct: 224 IAANS 228

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 51.3 bits (121), Expect = 1e-09
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCG----KTPGVYVQVNKYLRWIYNTAKG 84
           GDSGGPL  Q  + QW + G+VS+G   G      P V+ +V+ Y+ WI +    
Sbjct: 186 GDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIAN 240

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 34.4 bits (77), Expect = 0.002
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 80  NTAKGDSGGPLLLQRPDKQWTIIGVVSWG--IGCAQ 113
           ++  GDSGGPL  Q  + QW + G+VS+G  +GC  
Sbjct: 182 SSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNY 217

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.5 bits (119), Expect = 3e-09
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCG----KTPGVYVQVNKYLRWIYNT 81
           R    GDSGGPL     D  W + GV S+    G    K P V+ +V+ ++ WI  T
Sbjct: 172 RSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDET 228

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 33.2 bits (74), Expect = 0.004
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 77  WIYNTAKGDSGGPLLLQRPDKQWTIIGVVSW--GIGCAQ 113
              +   GDSGGPL     D  W + GV S+    GC  
Sbjct: 170 DTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNT 208

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (119), Expect = 3e-09
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 8/59 (13%)

Query: 28  SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQV-NKYLRWIYNTAK 83
            + +  GD+GGPL+ +          +VS G  CG    PG+Y  +  KY  WI +   
Sbjct: 182 QKDSCKGDAGGPLICK-----GVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNLV 235

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (84), Expect = 2e-04
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 5/40 (12%)

Query: 74  YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ 113
             +   ++ KGD+GGPL+ +          +VS G  C  
Sbjct: 178 DAKGQKDSCKGDAGGPLICK-----GVFHAIVSGGHECGV 212

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (118), Expect = 4e-09
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 6/60 (10%)

Query: 31  AQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGKTPGVYVQVNKYLRWIYNTAKGDSGGP 89
              GD G PL+ +         GV S+ +G CG+ P  + +V  +  WI         GP
Sbjct: 170 ICNGDGGTPLVCE-----GLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNNPGPGP 224

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

 Score = 48.6 bits (114), Expect = 1e-08
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 6/50 (12%)

Query: 35  DSGGPLLLQRPDKQWTIIGVVSWGIGCGKT-PGVYVQVNKYLRWIYNTAK 83
           DSGGPL+          IG+VS+G  C    P VY +V+ ++ WI    K
Sbjct: 177 DSGGPLVAN-----GAQIGIVSFGSPCALGEPDVYTRVSSFVSWINANLK 221

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 48.2 bits (113), Expect = 2e-08
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
             +  GDSGGP++         + G+VSWG GC     PGVY +V  Y+ WI  T
Sbjct: 170 GDSCQGDSGGPVV-----CSGKLQGIVSWGSGCQAKNKPGVYTKVCNYVSWIKQT 219

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.7 bits (112), Expect = 3e-08
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 8/61 (13%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGKT--PGVYVQVNKYLRWIYNTAKGD 85
           +     DSGGPL+         + G  S+G + CGK   P +Y  + K+  WI +T   +
Sbjct: 182 KDTCRDDSGGPLICD-----GILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMMKN 236

Query: 86  S 86
           +
Sbjct: 237 A 237

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]} Length = 215

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

 Score = 47.0 bits (110), Expect = 4e-08
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 11  CAAHQLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT---PGV 67
                 V  +       +    +G+SG  +L    D+   I+GV + G   G     P  
Sbjct: 146 WEMSGSVTREDTNLAYYTIDTFSGNSGSAML----DQNQQIVGVHNAGYSNGTINGGPKA 201

Query: 68  YVQVNKYLRWI 78
                +++ + 
Sbjct: 202 TAAFVEFINYA 212

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]} Length = 215

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

 Score = 35.1 bits (79), Expect = 7e-04
 Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 4/66 (6%)

Query: 49  WTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG 108
              +           +  V  +      +  +T  G+SG  +L    D+   I+GV + G
Sbjct: 134 GDKMRSTGKVSQWEMSGSVTREDTNLAYYTIDTFSGNSGSAML----DQNQQIVGVHNAG 189

Query: 109 IGCAQV 114
                +
Sbjct: 190 YSNGTI 195

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

 Score = 46.9 bits (110), Expect = 5e-08
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 7/50 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRWIYNT 81
           GDSGGP++         + GVVSWG GC +   PGVY +V  +  W+ +T
Sbjct: 174 GDSGGPVVCN-----GELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTST 218

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 47.0 bits (110), Expect = 6e-08
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 8/56 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG-CGKT--PGVYVQVNKYLRWIYNTAKGDS 86
           GDSGG L+           G+ SWG   C       V+ +V  + +WI  T + +S
Sbjct: 187 GDSGGALICD-----GVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIEKNS 237

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (110), Expect = 6e-08
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 8/62 (12%)

Query: 25  NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGKT--PGVYVQVNKYLRWIYNT 81
            +  + +  GDSGGPL+         + G+VSWG I CG    PGVY  V +Y  WI  T
Sbjct: 165 EKYGKDSCQGDSGGPLV-----CGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKT 219

Query: 82  AK 83
            +
Sbjct: 220 IQ 221

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.6 bits (109), Expect = 7e-08
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 8/60 (13%)

Query: 25  NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGKT--PGVYVQVNKYLRWIYNT 81
           +        GDSGGPL+         + G+ SWG   CGK   PGVY ++ +Y  WI  T
Sbjct: 169 SSNGADTCQGDSGGPLVCD-----GMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKT 223

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

 Score = 46.6 bits (109), Expect = 7e-08
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 8/61 (13%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGKT--PGVYVQVNKYLRWIYNTAKGD 85
           +    GDSGGPL+           G+VS+G   CG+   PG+Y  V  Y  WI     G+
Sbjct: 173 KDTCGGDSGGPLICN-----GQFQGIVSYGAHPCGQGPKPGIYTNVFDYTDWIQRNIAGN 227

Query: 86  S 86
           +
Sbjct: 228 T 228

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.6 bits (109), Expect = 8e-08
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGKT--PGVYVQVNKYLRWIYNTAKG 84
                 DSGGPL+         + G+ SWG   CG+   P VY ++ K+  WI  T   
Sbjct: 173 SYTCEHDSGGPLICD-----GILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMAN 226

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 242

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (108), Expect = 1e-07
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)

Query: 29  RQAQTGDSGGPLLLQRPDKQ-WTIIGVVSWG-IGCGKT--PGVYVQVNKYLRWIYNT 81
           + +  GDSGG L+    + + W + G+VSWG + CG+    GVY +V  Y+ WI N 
Sbjct: 182 KDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENI 238

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 46.3 bits (108), Expect = 1e-07
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWG--IGCGKT--PGVYVQVNKYLRWIYNT 81
           R    GDSGGPL     + Q+ + GV S+   +GC  T  P V+ +V+ Y+ WI N 
Sbjct: 181 RSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNV 236

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (108), Expect = 1e-07
 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 10/64 (15%)

Query: 26  RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGKT--PGVYVQV-NKYLRWIYN 80
           R  R +  GDSG PLL +         GV S+G+   CG    PGVY+ +  K+L WI  
Sbjct: 174 RGGRDSCNGDSGSPLLCE-----GVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIM 228

Query: 81  TAKG 84
           T KG
Sbjct: 229 TIKG 232

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]} Length = 226

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

 Score = 45.8 bits (107), Expect = 1e-07
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 24  FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCG---KTPGVYVQVNKYLRWIYN 80
            +   +    GDSGGPL     +      G+ S+G   G     P  + +V  +L WI  
Sbjct: 166 DSTGGKGTCNGDSGGPL-----NYNGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQT 220

Query: 81  T 81
            
Sbjct: 221 Q 221

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 45.8 bits (107), Expect = 2e-07
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 8/54 (14%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIG-CGK--TPGVYVQVNKYLRWIYNTAKG 84
           GDSGGPL+         + G+ S G   C K  TP +Y ++ K+  WI    K 
Sbjct: 185 GDSGGPLICD-----GVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKE 233

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

 Score = 44.8 bits (104), Expect = 3e-07
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 8/60 (13%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCG------KTPGVYVQVNKYLRWIYNTA 82
             A  GDSGGPL    PD    ++GV SW +  G        P VY +V+ YL WI + +
Sbjct: 184 TGACNGDSGGPLNC--PDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGDNS 241

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (102), Expect = 7e-07
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 8/56 (14%)

Query: 29  RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CG--KTPGVYVQVNKYLRWIYNT 81
           R +  GDSGGPL+         + GVV+ G   CG  K PG+Y +V  Y  WI + 
Sbjct: 176 RDSCKGDSGGPLVCG-----GVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSV 226

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (101), Expect = 7e-07
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAK 83
           GDSGGPL+         I   V WG      P  + +V  Y+ WI +T +
Sbjct: 174 GDSGGPLICD--GIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTLR 221

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]} Length = 187

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

 Score = 43.0 bits (100), Expect = 9e-07
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 7/60 (11%)

Query: 20  DYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT--PGVYVQVNKYLRW 77
                 RT+  +  GDSGG             +G+ S   GC  T    ++  V + L  
Sbjct: 127 PVYNMVRTTACSAGGDSGGAHF-----AGSVALGIHSGSSGCSGTAGSAIHQPVTEALSA 181

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]} Length = 230

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

 Score = 42.9 bits (99), Expect = 2e-06
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 46  DKQWTIIGVVSWGIGCG---KTPGVYVQVNKYLRWIYNT 81
             +  +IGVVS+  G G     P  + +V  Y+ WI   
Sbjct: 187 SDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQN 225

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]} Length = 236

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

 Score = 42.1 bits (97), Expect = 3e-06
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 31  AQTGDSGGPLLLQRPDKQWTIIGVVSW--GIGCGKT--PGVYVQVNKYLRWIYNT 81
              GDSGGPL  Q  +  + + GV S+    GC  +  P V+ +V+ Y+ W+   
Sbjct: 182 GCNGDSGGPLNCQV-NGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGI 235

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]} Length = 218

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (94), Expect = 7e-06
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 8/53 (15%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGI---GCGKTPGVYVQVNKYLRWIYNTAK 83
           GDSG PL+         I G+ S+       G  P  +  V +++ WI +  +
Sbjct: 171 GDSGSPLVCN-----GLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSIIQ 218

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]} Length = 263

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

 Score = 40.8 bits (94), Expect = 1e-05
 Identities = 10/60 (16%), Positives = 16/60 (26%), Gaps = 1/60 (1%)

Query: 24  FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKT-PGVYVQVNKYLRWIYNTA 82
           +  +    + G SG P+          + G  S     G      Y +V          A
Sbjct: 182 WQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWTGGGAAA 241

>d2o8la1 b.47.1.1 (A:1-216) V8 protease {Staphylococcus aureus [TaxId: 1280]} Length = 216

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: V8 protease
species: Staphylococcus aureus [TaxId: 1280]

 Score = 36.9 bits (84), Expect = 2e-04
 Identities = 8/47 (17%), Positives = 20/47 (42%), Gaps = 5/47 (10%)

Query: 34  GDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYN 80
           G+SG P+     +++  +IG+   G+       V++       ++  
Sbjct: 167 GNSGSPVF----NEKNEVIGIHWGGVPNEFNGAVFI-NENVRNFLKQ 208

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	117
d1rrka1	287	Factor B {Human (Homo sapiens) [TaxId: 9606]}	99.44
d1rjxb_	247	Plasmin(ogen), catalytic domain {Human (Homo sapie	99.36
d1brup_	241	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.32
d1eaxa_	241	Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 960	99.32
d1si5h_	234	Hepatocyte growth factor, HGF {Human (Homo sapiens	99.3
d1xx9a_	237	Coagulation factor XI {Human (Homo sapiens) [TaxId	99.3
d1elva1	259	Complement C1S protease, catalytic domain {Human (	99.29
g1gg6.1	238	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.28
d1gvkb_	240	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.28
d2p3ub1	233	Coagulation factor Xa, protease domain {Human (Hom	99.28
d1pytd_	251	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.27
d2qy0b1	240	Complement C1R protease, catalytic domain {Human (	99.27
g1gj7.1	256	Urokinase-type plasminogen activator (LMW U-PA), c	99.27
d2bz6h1	254	Coagulation factor VIIa {Human (Homo sapiens) [Tax	99.27
d1z8ga1	255	Hepsin, catalytic domain {Human (Homo sapiens) [Ta	99.26
d1ekbb_	235	Enteropeptidase (enterokinase light chain) {Cow (B	99.25
g1rtf.1	260	Two-chain tissue plasminogen activator (TC)-T-PA {	99.24
d1os8a_	223	Trypsin {Streptomyces griseus, strain k1 [TaxId: 1	99.24
d1fona_	232	Procarboxypeptidase A-S6 subunit III (zymogen E) {	99.24
d1nn6a_	224	Chymase (mast cell protease I) {Human (Homo sapien	99.24
d1rfna_	235	Coagulation factor IXa, protease domain {Human (Ho	99.23
d1t32a1	224	Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}	99.22
d2fpza1	243	beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}	99.22
d1eq9a_	222	(alpha,gamma)-chymotrypsin(ogen) {Red fire ant (So	99.22
d1hj8a_	222	Trypsin(ogen) {North atlantic salmon (Salmo salar)	99.21
g1h8d.1	289	Thrombin {Human (Homo sapiens) [TaxId: 9606]}	99.21
d1a7sa_	225	Heparin binding protein, HBP {Human (Homo sapiens)	99.21
d2f91a1	237	Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus	99.2
d1autc_	240	Activated protein c (autoprothrombin IIa) {Human (	99.2
g1fiw.1	274	Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}	99.17
d1fxya_	228	Coagulation factor Xa-trypsin chimera {Synthetic,	99.17
d1mzaa_	240	Granzyme K {Human (Homo sapiens) [TaxId: 9606]}	99.17
d1hj9a_	223	Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}	99.15
d1j16a_	223	Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 101	99.15
d1npma_	225	Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}	99.15
d1tona_	235	Tonin {Rat (Rattus rattus) [TaxId: 10117]}	99.15
d1eufa_	224	Duodenase {Cow (Bos taurus) [TaxId: 9913]}	99.14
d1q3xa1	242	Mannan-binding lectin serine protease 2 (MASP-2),	99.14
d1gdna_	224	Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5	99.14
d1orfa_	232	Granzyme A {Human (Homo sapiens) [TaxId: 9606]}	99.13
d1azza_	226	Crab collagenase {Atlantic sand fiddler crab (Uca	99.12
g2pka.1	232	Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}	99.11
d1fi8a_	227	Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]	99.11
d3rp2a_	224	Chymase II (mast cell proteinase II) {Rat (Rattus	99.1
d1sgfa_	228	7S NGF protease subunits {Mouse (Mus musculus) [Ta	99.1
d1ao5a_	237	Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]	99.08
d1elta_	236	Elastase {Salmon (Salmo salar) [TaxId: 8030]}	99.07
d1gvza_	237	Prostate specific antigen (PSA kallikrein) {Horse	99.06
d1lo6a_	221	Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}	99.04
d1bioa_	228	Factor D {Human (Homo sapiens) [TaxId: 9606]}	99.03
d1fq3a_	227	Granzyme B {Human (Homo sapiens) [TaxId: 9606]}	99.03
d1fuja_	221	Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 96	99.01
d2z7fe1	218	Elastase {Human (Homo sapiens) [TaxId: 9606]}	98.99
d2hlca_	230	HL collagenase {Common cattle grub (Hypoderma line	98.98
d1m9ua_	241	Elastase {Worm (Eisenia fetida) [TaxId: 6396]}	98.9
d1op0a_	234	Venom serine protease {Hundred-pace snake (Agkistr	98.9
d1arba_	263	Achromobacter protease {Achromobacter lyticus, str	98.57
d1rrka1	287	Factor B {Human (Homo sapiens) [TaxId: 9606]}	98.3
d1brup_	241	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	98.21
d1z8ga1	255	Hepsin, catalytic domain {Human (Homo sapiens) [Ta	98.18
d1os8a_	223	Trypsin {Streptomyces griseus, strain k1 [TaxId: 1	98.12
g1h8d.1	289	Thrombin {Human (Homo sapiens) [TaxId: 9606]}	98.12
d1eaxa_	241	Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 960	98.11
g1gj7.1	256	Urokinase-type plasminogen activator (LMW U-PA), c	98.11
d1rjxb_	247	Plasmin(ogen), catalytic domain {Human (Homo sapie	98.09
g1rtf.1	260	Two-chain tissue plasminogen activator (TC)-T-PA {	98.08
d2p3ub1	233	Coagulation factor Xa, protease domain {Human (Hom	98.08
d1rfna_	235	Coagulation factor IXa, protease domain {Human (Ho	98.01
d2bz6h1	254	Coagulation factor VIIa {Human (Homo sapiens) [Tax	98.01
d2f91a1	237	Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus	98.0
d1elva1	259	Complement C1S protease, catalytic domain {Human (	97.98
d1autc_	240	Activated protein c (autoprothrombin IIa) {Human (	97.97
d1gdna_	224	Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5	97.97
d1xx9a_	237	Coagulation factor XI {Human (Homo sapiens) [TaxId	97.96
d1si5h_	234	Hepatocyte growth factor, HGF {Human (Homo sapiens	97.95
d1ekbb_	235	Enteropeptidase (enterokinase light chain) {Cow (B	97.94
d3rp2a_	224	Chymase II (mast cell proteinase II) {Rat (Rattus	97.92
d1t32a1	224	Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}	97.91
g1fiw.1	274	Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}	97.86
d1pytd_	251	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	97.85
d1hj8a_	222	Trypsin(ogen) {North atlantic salmon (Salmo salar)	97.85
d1fona_	232	Procarboxypeptidase A-S6 subunit III (zymogen E) {	97.84
d2fpza1	243	beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}	97.84
d1gvkb_	240	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	97.82
d1mzaa_	240	Granzyme K {Human (Homo sapiens) [TaxId: 9606]}	97.81
d1fxya_	228	Coagulation factor Xa-trypsin chimera {Synthetic,	97.79
g1gg6.1	238	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	97.76
d2qy0b1	240	Complement C1R protease, catalytic domain {Human (	97.76
d1nn6a_	224	Chymase (mast cell protease I) {Human (Homo sapien	97.75
d1q3xa1	242	Mannan-binding lectin serine protease 2 (MASP-2),	97.74
d1tona_	235	Tonin {Rat (Rattus rattus) [TaxId: 10117]}	97.72
d1eq9a_	222	(alpha,gamma)-chymotrypsin(ogen) {Red fire ant (So	97.71
d1hpga_	187	Glutamic acid-specific protease {Streptomyces gris	97.7
d1p3ca_	215	Glutamyl endopeptidase {Bacillus intermedius [TaxI	97.64
d1hpga_	187	Glutamic acid-specific protease {Streptomyces gris	97.64
d1npma_	225	Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}	97.58
d1lo6a_	221	Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}	97.56
d1j16a_	223	Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 101	97.55
d1elta_	236	Elastase {Salmon (Salmo salar) [TaxId: 8030]}	97.55
d1azza_	226	Crab collagenase {Atlantic sand fiddler crab (Uca	97.53
d1eufa_	224	Duodenase {Cow (Bos taurus) [TaxId: 9913]}	97.49
d1arba_	263	Achromobacter protease {Achromobacter lyticus, str	97.39
g2pka.1	232	Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}	97.39
d2z7fe1	218	Elastase {Human (Homo sapiens) [TaxId: 9606]}	97.39
d1fi8a_	227	Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]	97.38
d1ao5a_	237	Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]	97.3
d1hj9a_	223	Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}	97.28
d1sgfa_	228	7S NGF protease subunits {Mouse (Mus musculus) [Ta	97.25
d1gvza_	237	Prostate specific antigen (PSA kallikrein) {Horse	97.21
d1bioa_	228	Factor D {Human (Homo sapiens) [TaxId: 9606]}	97.21
d1fq3a_	227	Granzyme B {Human (Homo sapiens) [TaxId: 9606]}	97.19
d1a7sa_	225	Heparin binding protein, HBP {Human (Homo sapiens)	97.09
d1orfa_	232	Granzyme A {Human (Homo sapiens) [TaxId: 9606]}	97.09
d1fuja_	221	Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 96	97.03
d1op0a_	234	Venom serine protease {Hundred-pace snake (Agkistr	97.01
d2hlca_	230	HL collagenase {Common cattle grub (Hypoderma line	96.94
d1m9ua_	241	Elastase {Worm (Eisenia fetida) [TaxId: 6396]}	96.25
d1p3ca_	215	Glutamyl endopeptidase {Bacillus intermedius [TaxI	96.17
d2sgaa_	181	Protease A {Streptomyces griseus, strain k1 [TaxId	94.48
d2o8la1	216	V8 protease {Staphylococcus aureus [TaxId: 1280]}	93.89
d2sgaa_	181	Protease A {Streptomyces griseus, strain k1 [TaxId	92.66
d2qaaa1	185	Protease B {Streptomyces griseus, strain k1 [TaxId	88.45
d2o8la1	216	V8 protease {Staphylococcus aureus [TaxId: 1280]}	87.93
d1agja_	242	Epidermolytic (exfoliative) toxin A {Staphylococcu	87.48
d2h5ca1	198	alpha-Lytic protease {Lysobacter enzymogenes, 495	84.7
d1agja_	242	Epidermolytic (exfoliative) toxin A {Staphylococcu	83.19
d2h5ca1	198	alpha-Lytic protease {Lysobacter enzymogenes, 495	82.79

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=6.9e-14  Score=95.36  Aligned_cols=61  Identities=26%  Similarity=0.676  Sum_probs=49.3

Q ss_pred             CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC----------CCceeeecccchHHHHhhccCCCCC
Q psy7307          27 TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK----------TPGVYVQVNKYLRWIYNTAKGDSGG   88 (117)
Q Consensus        27 ~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~----------~p~~~t~v~~~~~wi~~~~~gdsg~   88 (117)
                      .+.++|.||||+||+++. .++|+++||+||+.  .|..          .|.+|+++..|.+||+++++++.-+
T Consensus       213 ~~~~~C~GDSGgPL~~~~-~~~~~lvGI~S~G~~~~~~~~~~~~~~~~~~~~vyt~V~~y~~WI~~~i~~~~~~  285 (287)
T d1rrka1         213 ADPNTCRGDSGGPLIVHK-RSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDEDLG  285 (287)
T ss_dssp             CCCCCCGGGTTCEEEEEE-TTEEEEEEEEEEESCCCC--------CCTTCEEEEEEGGGGHHHHHHHTTTSSCC
T ss_pred             cCCCCCCCCccCCeEEec-CCeEEEEEEEEecCCcCcCCCCCCCcCCCCCCcEEEEHHHHHHHHHHHhcCCCCC
Confidence            457889999999999874 67899999999853  2321          4678999999999999999877644

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=6.4e-13  Score=87.80  Aligned_cols=63  Identities=35%  Similarity=0.818  Sum_probs=53.4

Q ss_pred             eee-cCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccC
Q psy7307          21 YDV-FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        21 ~~~-~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      +|+ ......+.|.+|+|+||+... +++|+++||+|++..|..  .|.+|+++..|.+||++++++
T Consensus       181 ~c~~~~~~~~~~c~gdsG~pl~~~~-~~~~~l~Gi~S~~~~c~~~~~p~v~t~v~~~~~WI~~~i~~  246 (247)
T d1rjxb_         181 LCAGHLAGGTDSCQGDSGGPLVCFE-KDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMRN  246 (247)
T ss_dssp             EEESCSSSCCCBCCSCTTCEEEEEC-SSSEEEEEEECTTSCCBBTTBCEEEEEGGGGHHHHHHHHHH
T ss_pred             eEEeccCCCcccccCCccceEEEee-CCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHhc
Confidence            444 345677899999999999874 689999999999978865  789999999999999998874

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.32  E-value=2e-12  Score=84.86  Aligned_cols=82  Identities=29%  Similarity=0.536  Sum_probs=61.5

Q ss_pred             eeeeccccccCCc-----ccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCC--CCC--CCceeeeccc
Q psy7307           3 LCLVLVLICAAHQ-----LVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG--CGK--TPGVYVQVNK   73 (117)
Q Consensus         3 ~~~~~~~~C~~~~-----~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~--C~~--~p~~~t~v~~   73 (117)
                      +.+.+...|....     .....+|.......+.|.+|+|+||+.+...++|+++||+|++..  |..  .|.+|+++..
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~C~gdsGgPl~~~~~~~~~~L~Gi~S~g~~~~c~~~~~p~vyt~v~~  229 (241)
T d1brup_         150 LLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSN  229 (241)
T ss_dssp             EEEECHHHHTSTTTTGGGCCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGG
T ss_pred             EEEeCHHHhCccccccccccccceeecCCCCccccCCCcccceEEEcCCCCEEEEEEEEECCCCCCCCCCCCEEEEEHHH
Confidence            3445555665421     222224555667788999999999998866789999999999754  544  7899999999


Q ss_pred             chHHHHhhccC
Q psy7307          74 YLRWIYNTAKG   84 (117)
Q Consensus        74 ~~~wi~~~~~g   84 (117)
                      |.+||++++++
T Consensus       230 ~~~WI~~~i~~  240 (241)
T d1brup_         230 YIDWINSVIAN  240 (241)
T ss_dssp             SHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999998764

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=2.3e-12  Score=85.23  Aligned_cols=64  Identities=36%  Similarity=0.603  Sum_probs=53.6

Q ss_pred             cceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhc
Q psy7307          19 ADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTA   82 (117)
Q Consensus        19 ~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~   82 (117)
                      ..+|+.. ....+.|.+|+|+||++...+++|+++||++++..|..  .|.+|+++..|.+||++.+
T Consensus       173 ~~~c~~~~~~~~~~c~gd~G~pl~~~~~~g~~~L~Gi~s~~~~c~~~~~p~vft~V~~y~~WI~~~~  239 (241)
T d1eaxa_         173 RMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENT  239 (241)
T ss_dssp             TEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHHH
T ss_pred             ccceeccCCCCcccccCcccceeEEEcCCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHh
Confidence            3345533 45678999999999998866789999999999877865  8899999999999999875

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=3.6e-12  Score=84.00  Aligned_cols=66  Identities=29%  Similarity=0.572  Sum_probs=55.0

Q ss_pred             ccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccC
Q psy7307          18 RADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        18 ~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      ...+|+... ...+.|.+|+|+||+.+. +.+|+++||+|++..|..  .|.+|+++..|.+||++.++.
T Consensus       160 ~~~~C~~~~~~~~~~c~gdsG~pl~~~~-~~~~~l~Gi~s~g~~c~~~~~p~vyt~i~~~~~WI~~~i~~  228 (234)
T d1si5h_         160 ESEICAGAEKIGSGPCEGDYGGPLVCEQ-HKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILT  228 (234)
T ss_dssp             TTEEEEECSSSCCBCCTTCTTCEEEEEC-SSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHSS
T ss_pred             CccEEEccCCcCCCCCcCccccceEEec-CCeEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHhhc
Confidence            344565544 567899999999999874 678999999999988865  889999999999999999864

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=2.8e-12  Score=84.36  Aligned_cols=58  Identities=40%  Similarity=0.983  Sum_probs=50.5

Q ss_pred             CCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          25 NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        25 ~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .....+.|.+|+|+||+... +++|+++||+|++..|..  .|.+|+++..|.+||+++++
T Consensus       177 ~~~~~~~c~gdsG~pl~~~~-~~~~~l~Gi~s~g~~~~~~~~p~vft~v~~~~~WI~~~~~  236 (237)
T d1xx9a_         177 REGGKDACKGDSGGPLSCKH-NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ  236 (237)
T ss_dssp             TTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEEESSSSCTTCCEEEECGGGGHHHHHHHHC
T ss_pred             CCCCcccccCCccceeEEec-CCEEEEEEEEEeCCCCCCCCCCEEEEEhHHhHhHHHHHHC
Confidence            34567899999999999874 689999999999877765  78999999999999999876

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=4.3e-12  Score=84.56  Aligned_cols=66  Identities=35%  Similarity=0.685  Sum_probs=55.7

Q ss_pred             ceeecCCCCCCcccCCCCCeeEEEcC--CCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhccCCC
Q psy7307          20 DYDVFNRTSRQAQTGDSGGPLLLQRP--DKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKGDS   86 (117)
Q Consensus        20 ~~~~~~~~~~~~C~~dsG~pl~~~~~--~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~gds   86 (117)
                      .+|+......+.|.+|+|+||++...  .++|+++||+|++..|. .|.+|+++..|.+||+++++.+|
T Consensus       192 ~~~~~~~~~~~~c~gDsGgPl~~~~~~~~~~~~l~Gi~S~~~~c~-~p~vft~V~~~~~WI~~~i~~~~  259 (259)
T d1elva1         192 MICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCG-TYGLYTRVKNYVDWIMKTMQENS  259 (259)
T ss_dssp             EEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTT-SEEEEEEGGGGHHHHHHHHHHTC
T ss_pred             eeeccCCCCCccCCCCcCCeEEEEecCCCcEEEEEEEEEeCCCCC-CceEEeEHHHHHHHHHHHHHhcC
Confidence            35666667789999999999998743  36899999999997786 68899999999999999987654

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.28  E-value=2.7e-12  Score=84.18  Aligned_cols=64  Identities=33%  Similarity=0.561  Sum_probs=54.3

Q ss_pred             ceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC--CCceeeecccchHHHHhhccC
Q psy7307          20 DYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK--TPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        20 ~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~--~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      .+|+......+.|.+|+|+||+... +++|+++||+|++.  .|.+  .|.+|+++..|.+||++++++
T Consensus       172 ~~c~~~~~~~~~c~gDsG~pl~~~~-~~~~~lvGI~S~~~~~~c~~~~~p~vyt~v~~~~~WI~~~i~~  239 (240)
T d1gvkb_         172 MVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIAS  239 (240)
T ss_dssp             EEEECCSSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHHH
T ss_pred             eEEecCCCCCccccCccccceEEEE-CCEEEEEEEEEEcCCCCCCCCCCCEEEEEHHHhHHHHHHHHhc
Confidence            3677777888999999999999874 67999999999874  3554  789999999999999998764

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=6.2e-12  Score=82.10  Aligned_cols=58  Identities=36%  Similarity=0.838  Sum_probs=50.9

Q ss_pred             CCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          25 NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        25 ~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .......|.+|+|+||+++. +++|+++||.|++..|..  .|.+|+++..|.+||+++++
T Consensus       174 ~~~~~~~~~gdsGgpl~~~~-~~~~~L~Gv~s~g~~c~~~~~p~vyt~v~~y~~WI~~~i~  233 (233)
T d2p3ub1         174 DTKQEDACQGDSGGPHVTRF-KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK  233 (233)
T ss_dssp             SSSSCBCCTTTTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHTC
T ss_pred             ccccCCCcCCCcccccEEec-CCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhC
Confidence            34577899999999999874 678999999999988865  78999999999999999874

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.27  E-value=9.3e-12  Score=82.53  Aligned_cols=62  Identities=37%  Similarity=0.693  Sum_probs=53.6

Q ss_pred             eeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC--CCceeeecccchHHHHhhcc
Q psy7307          21 YDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        21 ~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      +|+......+.|.+|+|+||++.. .++|+++||+|++.  .|.+  .|.+|+++..|.+||+++++
T Consensus       185 ~c~~~~~~~~~c~gd~G~Pl~~~~-~~~~~L~Gi~S~~~~~~c~~~~~p~vyt~v~~y~~WI~~~i~  250 (251)
T d1pytd_         185 VCAGGDGVISACNGDSGGPLNCQA-DGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKLQ  250 (251)
T ss_dssp             EEECCSCSSCCCCSCTTCEEEEES-SSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHHTT
T ss_pred             EEeccCCCCccccCCCCCceEEee-CCEEEEEEEEEECCCCCCCCCCCCeEEEEHHHhHHHHHHhcc
Confidence            677777788999999999999874 67899999999864  4654  78999999999999999875

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=8.2e-12  Score=82.46  Aligned_cols=64  Identities=34%  Similarity=0.782  Sum_probs=52.9

Q ss_pred             eeecC-CCCCCcccCCCCCeeEEEcC-CCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhccC
Q psy7307          21 YDVFN-RTSRQAQTGDSGGPLLLQRP-DKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        21 ~~~~~-~~~~~~C~~dsG~pl~~~~~-~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      +|+.. ....+.|.+|+|+||+.... ..+|+++||+|++..|.+.|.+|+++..|.+||++.+++
T Consensus       175 ~c~~~~~~~~~~~~gdsG~pl~~~~~~~~~~~l~Gi~S~g~~c~~~p~vft~v~~~~~WI~~~i~~  240 (240)
T d2qy0b1         175 FCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEMEE  240 (240)
T ss_dssp             EEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSSSCEEEEEGGGGHHHHHHHTTC
T ss_pred             EEeccCCccceeeccccccceEEEeCCCCeEEEEEEEEECCCCCCCCeEEEEHHHHHHHHHHHhcC
Confidence            44432 35678999999999998754 368999999999978887888999999999999998763

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=8.6e-12  Score=82.37  Aligned_cols=66  Identities=33%  Similarity=0.774  Sum_probs=56.4

Q ss_pred             CCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccCCCCCcee
Q psy7307          25 NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKGDSGGPLL   91 (117)
Q Consensus        25 ~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~gdsg~pl~   91 (117)
                      ..+....|.+|+|+||++.. .++|+++||.||+..|..  .|.+|+++..|.+||+++++.++..-++
T Consensus       181 ~~~~~~~~~gdsGgPl~~~~-~~~~~lvGi~S~g~~c~~~~~p~vytrv~~~~~WI~~~i~~~~~~~~~  248 (254)
T d2bz6h1         181 SDGSKDSCKGDSGGPHATHY-RGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSEPRPGVL  248 (254)
T ss_dssp             SSSSCBCCGGGTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHTSCCCSSSE
T ss_pred             cCCCcccccCccccceEEcc-CCeEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHhhCCCCCCC
Confidence            34577899999999999874 679999999999878875  8899999999999999999987765443

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=7.7e-12  Score=83.20  Aligned_cols=66  Identities=36%  Similarity=0.851  Sum_probs=55.2

Q ss_pred             eecCCCCCCcccCCCCCeeEEEcC---CCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhccCCCC
Q psy7307          22 DVFNRTSRQAQTGDSGGPLLLQRP---DKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAKGDSG   87 (117)
Q Consensus        22 ~~~~~~~~~~C~~dsG~pl~~~~~---~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~gdsg   87 (117)
                      |....+..+.|.+|+|+||++...   .++|+++||+|++..|..  .|.+|+++..|.+||+++++..+-
T Consensus       177 ~~~~~~~~~~c~gdsGgPl~~~~~~~~~~~~~l~Gi~S~g~~c~~~~~p~vft~V~~y~~WI~~~i~~~~~  247 (255)
T d1z8ga1         177 AGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSE  247 (255)
T ss_dssp             ESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHHHHHHHHHHTTT
T ss_pred             EecCCCCcccccCccccceEEecCCCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHHHHHHHcCC
Confidence            444556778999999999997643   378999999999878876  789999999999999999975554

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.25  E-value=1e-11  Score=81.47  Aligned_cols=61  Identities=34%  Similarity=0.707  Sum_probs=50.8

Q ss_pred             eeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhc
Q psy7307          21 YDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTA   82 (117)
Q Consensus        21 ~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~   82 (117)
                      +|+... ...+.|.+|+|+||+... +++|+++||.|++..|..  .|.+|+++..|.+||++.+
T Consensus       171 ~c~~~~~~~~~~c~gdsG~pl~~~~-~~~~~l~Gi~S~g~~~~~~~~p~v~t~v~~y~~WI~~~i  234 (235)
T d1ekbb_         171 VCAGYEAGGVDSCQGDSGGPLMCQE-NNRWLLAGVTSFGYQCALPNRPGVYARVPRFTEWIQSFL  234 (235)
T ss_dssp             EEECCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHTTC
T ss_pred             EEEEcCCCCcccccCCCCCccEEcc-CCEEEEEEEEEecCCCCCCCCCEEEEEHHHHHHHHHHhh
Confidence            344333 456789999999999874 679999999999877765  8899999999999999875

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=99.24  E-value=8.9e-12  Score=81.59  Aligned_cols=58  Identities=36%  Similarity=0.833  Sum_probs=51.3

Q ss_pred             CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          26 RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        26 ~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      ....+.|.+|+|+||++.....+|+++||.|++..|.+  .|++|+++..|.+||+++++
T Consensus       162 ~~~~~~c~~~~G~pl~~~~~~~~~~L~Gi~s~~~~c~~~~~p~vft~V~~y~~WI~~~~k  221 (223)
T d1os8a_         162 TGGVDTCQGDSGGPMFRKDNADEWIQVGIVSWGYGCARPGYPGVYTEVSTFASAIASAAR  221 (223)
T ss_dssp             TCCCBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEEHHHHHHHHHHHHH
T ss_pred             cCCcCccccccccceEEecCCCeEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHh
Confidence            34568899999999998866689999999999988865  88999999999999999876

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.24  E-value=8.3e-12  Score=81.88  Aligned_cols=64  Identities=33%  Similarity=0.660  Sum_probs=52.9

Q ss_pred             eeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC--CCceeeecccchHHHHhhccC
Q psy7307          21 YDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK--TPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        21 ~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~--~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      +|.........|.+|+|+||+....+++|+++||+|++.  .|..  .|++|+++..|.+||+++++.
T Consensus       164 ~~c~~~~~~~~~~gdsGgpl~~~~~~~~~~L~Gi~s~~~~~~c~~~~~p~vyt~V~~y~~WI~~~i~~  231 (232)
T d1fona_         164 MVCAGGDTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIAS  231 (232)
T ss_dssp             EEEECCSSSCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHHHH
T ss_pred             eeeeccccccccccCCCCceEEEccCCCEEEEEEEEEcCCCCCCCCCCCEEEEEHHHHHHHHHHHHHc
Confidence            444455677889999999999876678999999999864  4765  789999999999999998764

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=6.7e-12  Score=82.01  Aligned_cols=78  Identities=31%  Similarity=0.481  Sum_probs=57.9

Q ss_pred             ceeeeccccccCCc--ccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHHH
Q psy7307           2 SLCLVLVLICAAHQ--LVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWI   78 (117)
Q Consensus         2 ~~~~~~~~~C~~~~--~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi   78 (117)
                      ++.+.+...|....  .....+|+... ...+.|.+|+|+||+.+     ++++||+|++..|.+.|.+|+++..|.+||
T Consensus       143 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~c~gDsG~PL~~~-----~~l~GI~s~g~~~~~~p~vyt~v~~y~~WI  217 (224)
T d1nn6a_         143 KLRLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCA-----GVAQGIVSYGRSDAKPPAVFTRISHYRPWI  217 (224)
T ss_dssp             EEEBCCGGGGTTSTTCCTTTEEEECCTTTC--CCCCCTTCEEEET-----TEEEEEEEECCTTCCSCEEEEEHHHHHHHH
T ss_pred             EEEecCHHHHhhhcccccceeeeccCccccccccCCCccceEEEC-----CEEEEEEEECCCCCCCCeEEEEHHHHHHHH
Confidence            35667788886522  23334455444 45779999999999975     479999999955555899999999999999


Q ss_pred             HhhccC
Q psy7307          79 YNTAKG   84 (117)
Q Consensus        79 ~~~~~g   84 (117)
                      +++++.
T Consensus       218 ~~~i~~  223 (224)
T d1nn6a_         218 NQILQA  223 (224)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            999875

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.2e-11  Score=80.93  Aligned_cols=61  Identities=33%  Similarity=0.744  Sum_probs=52.7

Q ss_pred             eecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          22 DVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        22 ~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      |.......+.|.+|+|+||++.. +++|+++||+|++..|..  .|.+|+++..|.+||+++++
T Consensus       171 ~~~~~~~~~~~~gdsGgpl~~~~-~~~~~l~Gi~s~g~~~~~~~~p~vyt~v~~~~~WI~~~~~  233 (235)
T d1rfna_         171 AGFHEGGRDSCQGDSGGPHVTEV-EGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTK  233 (235)
T ss_dssp             ESCSSCSCBCCTTCTTCEEEEES-SSCEEEEEEEEEESSSSCTTCCEEEEEGGGTHHHHHHHHC
T ss_pred             eecCCCCccccCCCCCceeEEec-CCeEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHhc
Confidence            44455678999999999999874 678999999999877765  88999999999999999876

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=7.3e-12  Score=81.68  Aligned_cols=76  Identities=34%  Similarity=0.511  Sum_probs=56.5

Q ss_pred             eeeeccccccC---Ccccccceeec-CCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHHH
Q psy7307           3 LCLVLVLICAA---HQLVRADYDVF-NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWI   78 (117)
Q Consensus         3 ~~~~~~~~C~~---~~~~~~~~~~~-~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi   78 (117)
                      +.+.+...|..   .......+|+. .....+.|.+|+|+||+++     ++++||+|++..|...|.+|+++..|.+||
T Consensus       144 ~~~~~~~~C~~~~~~~~~~~~~c~~~~~~~~~~c~gdsGgPl~~~-----~~l~Gi~S~g~~~~~~p~vyt~v~~y~~WI  218 (224)
T d1t32a1         144 LRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCN-----NVAHGIVSYGKSSGVPPEVFTRVSSFLPWI  218 (224)
T ss_dssp             EEBCCHHHHHHHSTTCCTTTEEEECCTTSSCBCCTTCTTCEEEET-----TEEEEEEEECCTTCCSCEEEEEGGGSHHHH
T ss_pred             eeecCHHHHHhhcCcccccccceeecccccccccccCcCCeEEEc-----CEEEEEEEEcCCCCCCCcEEEEHHHhHHHH
Confidence            44555666653   11223334444 3457889999999999975     369999999966766899999999999999


Q ss_pred             Hhhcc
Q psy7307          79 YNTAK   83 (117)
Q Consensus        79 ~~~~~   83 (117)
                      ++.++
T Consensus       219 ~~~i~  223 (224)
T d1t32a1         219 RTTMR  223 (224)
T ss_dssp             HHHHC
T ss_pred             HHHHc
Confidence            99886

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.6e-11  Score=81.01  Aligned_cols=63  Identities=43%  Similarity=0.863  Sum_probs=54.1

Q ss_pred             ceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          20 DYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        20 ~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .+|.........|.+|+|+||+... .++|+++||.|++..|..  .|.+|+++..|.+||++.++
T Consensus       178 ~~~~~~~~~~~~~~gdsGgpl~~~~-~~~~~L~Gi~s~~~~~~~~~~p~v~t~v~~y~~WI~~~i~  242 (243)
T d2fpza1         178 DMLCAGNTRRDSCQGDSGGPLVCKV-NGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVP  242 (243)
T ss_dssp             TEEEECCSSSBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHTTTSC
T ss_pred             eeEecCCCCCCCccCCCCCeEEEee-CCEEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhC
Confidence            3555666778999999999999874 578999999999977765  78999999999999998875

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

Probab=99.22  E-value=8e-12  Score=81.20  Aligned_cols=75  Identities=29%  Similarity=0.583  Sum_probs=58.8

Q ss_pred             eeeccccccCC--cccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC-CCceeeecccchHHHHh
Q psy7307           4 CLVLVLICAAH--QLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK-TPGVYVQVNKYLRWIYN   80 (117)
Q Consensus         4 ~~~~~~~C~~~--~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~-~p~~~t~v~~~~~wi~~   80 (117)
                      .+.+...|...  ......+|+..+...+.|.+|+|+||+++     +.++||+|++..|.. .|.+|+++..|.+||++
T Consensus       144 ~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~c~~d~G~pl~~~-----~~L~GI~s~~~~c~~~~p~vyt~v~~y~~WI~~  218 (222)
T d1eq9a_         144 IVHPQKQCERDQWRVIDSHICTLTKRGEGACHGDSGGPLVAN-----GAQIGIVSFGSPCALGEPDVYTRVSSFVSWINA  218 (222)
T ss_dssp             EEECHHHHHHHSSSCCTTEEEECCCTTCBCCTTCTTCEEEET-----TEEEEEEEECSTTTSSSCEEEEEGGGGHHHHHH
T ss_pred             EEechHHhccccccccCcceEeccCCCCCccccCCcCCEEEc-----CEEEEEEEECCCCCCCCCcEEEEHHHHHHHHHH
Confidence            34444555542  23344567777778899999999999964     469999999988977 89999999999999999


Q ss_pred             hcc
Q psy7307          81 TAK   83 (117)
Q Consensus        81 ~~~   83 (117)
                      +++
T Consensus       219 ~i~  221 (222)
T d1eq9a_         219 NLK  221 (222)
T ss_dssp             TSC
T ss_pred             Hhc
Confidence            875

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

Probab=99.21  E-value=8.2e-12  Score=81.48  Aligned_cols=62  Identities=35%  Similarity=0.714  Sum_probs=50.2

Q ss_pred             cccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          17 VRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        17 ~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      ....+|+.. ....+.|.+|+|+||+++     +.++||.|++..|.+  .|.+|+++..|.+||+++++
T Consensus       156 ~~~~~C~~~~~~~~~~c~gdsGgPl~~~-----~~l~Gi~S~g~~~~~~~~p~v~t~v~~y~~WI~~~i~  220 (222)
T d1hj8a_         156 TNAMFCAGYLEGGKDSCQGDSGGPVVCN-----GELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMA  220 (222)
T ss_dssp             CTTEEEESCTTSSCBCCTTCTTCEEEET-----TEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             ccceEEEccCCCCcccccCCcccEEEEC-----CEEEEEEEEecCCCCCCCCEEEEEHHHHHHHHHHHHH
Confidence            344456533 446789999999999975     369999999987876  88999999999999999875

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=1.5e-11  Score=80.27  Aligned_cols=79  Identities=23%  Similarity=0.440  Sum_probs=61.3

Q ss_pred             eeeeccccccCCcccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCC-CCCCCceeeecccchHHHHhh
Q psy7307           3 LCLVLVLICAAHQLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGKTPGVYVQVNKYLRWIYNT   81 (117)
Q Consensus         3 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~-C~~~p~~~t~v~~~~~wi~~~   81 (117)
                      +.+.+...|....    ..+.......+.|.+|+|+||+++     +.++||.|++.. |.+.|.+||++..|.+||+++
T Consensus       146 ~~~~~~~~C~~~~----~~~~~~~~~~~~c~gdsG~Pl~~~-----~~l~Gi~S~~~~~c~~~p~v~t~v~~y~~WI~~~  216 (225)
T d1a7sa_         146 VTVTPEDQCRPNN----VCTGVLTRRGGICNGDGGTPLVCE-----GLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGV  216 (225)
T ss_dssp             EEECCGGGSCTTE----EEEECSSSSCBCCTTCTTCEEEET-----TEEEEEEEEECSSTTSSCEEEEEGGGGHHHHHHH
T ss_pred             EEEeehhhccccc----ceeeecccccccccCCCCCCEEEe-----CEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHH
Confidence            4566777787653    223345567889999999999975     469999999864 444889999999999999999


Q ss_pred             ccCCCCCce
Q psy7307          82 AKGDSGGPL   90 (117)
Q Consensus        82 ~~gdsg~pl   90 (117)
                      ++....+|+
T Consensus       217 i~~~~~~~~  225 (225)
T d1a7sa_         217 LNNPGPGPA  225 (225)
T ss_dssp             HHSCSCCCC
T ss_pred             HCCCCCCCC
Confidence            997776663

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

Probab=99.20  E-value=1.4e-11  Score=80.98  Aligned_cols=61  Identities=36%  Similarity=0.680  Sum_probs=50.8

Q ss_pred             eeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhc
Q psy7307          21 YDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTA   82 (117)
Q Consensus        21 ~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~   82 (117)
                      +|... ....+.|.+|+|+||++.. .++|+++||.|++..|..  .|.+|+++..|.+||++..
T Consensus       173 ~c~~~~~~~~~~~~gdsG~Pl~~~~-~~~~~L~Gi~S~g~~c~~~~~p~v~t~v~~y~~WI~~n~  236 (237)
T d2f91a1         173 ICAGVPEGGKDSCQGDSGGPLAASD-TGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKANA  236 (237)
T ss_dssp             EEECCTTCCCBCCTTCTTCEEEECT-TSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHHHC
T ss_pred             eEeecCCCccccccCCCCCeEEEec-CCeEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHhC
Confidence            44443 3457899999999999884 689999999999877876  7899999999999998753

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=2.5e-11  Score=79.64  Aligned_cols=60  Identities=40%  Similarity=0.864  Sum_probs=52.0

Q ss_pred             ecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHHHHhhcc
Q psy7307          23 VFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        23 ~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .......+.|.+|+|+||+++. .++|+++||.|++..|..  .|.+|+++..|.+||++.++
T Consensus       178 ~~~~~~~~~~~gd~G~pl~~~~-~~~~~l~Gi~s~g~~c~~~~~p~vftrv~~y~~WI~~~i~  239 (240)
T d1autc_         178 GILGDRQDACEGDSGGPMVASF-HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIR  239 (240)
T ss_dssp             CCTTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHHHHHC
T ss_pred             ccccccCCCcCCccCceeEEcC-CCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHhC
Confidence            3345677899999999999874 589999999999977865  78999999999999999876

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

Probab=99.17  E-value=1.3e-11  Score=80.74  Aligned_cols=79  Identities=37%  Similarity=0.725  Sum_probs=60.3

Q ss_pred             eeeeccccccC---Ccccccceee-cCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchH
Q psy7307           3 LCLVLVLICAA---HQLVRADYDV-FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLR   76 (117)
Q Consensus         3 ~~~~~~~~C~~---~~~~~~~~~~-~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~   76 (117)
                      +.+.+...|..   .......+|+ ........|.+|+|+||+++     +.++||+|++..|..  .|.+|+++..|.+
T Consensus       144 ~~~~~~~~C~~~~~~~~~~~~~c~~~~~~~~~~~~gd~G~Pl~~~-----~~l~Gi~s~g~~~~~~~~p~vft~v~~~~~  218 (228)
T d1fxya_         144 APVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCN-----GQLQGVVSWGDGCAQKNKPGVYTKVYNYVK  218 (228)
T ss_dssp             EEBCCHHHHHHHSTTTCCTTEEEESCTTCSCBCCTTCTTCEEEET-----TEEEEEEEECSSSSBTTBCEEEEEGGGGHH
T ss_pred             EEEeCHHHHhhhcCCcccceeeEeecCCCCcccccCccCccEEEe-----CEEEEEEEECCCCCCCCCCEEEEEHHHHHH
Confidence            45566677753   2223334454 44567899999999999975     469999999877764  7899999999999


Q ss_pred             HHHhhccCCC
Q psy7307          77 WIYNTAKGDS   86 (117)
Q Consensus        77 wi~~~~~gds   86 (117)
                      ||+++++.+|
T Consensus       219 WI~~~i~~~~  228 (228)
T d1fxya_         219 WIKNTIAANS  228 (228)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHhcC
Confidence            9999987664

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.6e-11  Score=80.80  Aligned_cols=77  Identities=25%  Similarity=0.523  Sum_probs=56.5

Q ss_pred             eeeeccccccCCc-------ccccceee-cCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecc
Q psy7307           3 LCLVLVLICAAHQ-------LVRADYDV-FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVN   72 (117)
Q Consensus         3 ~~~~~~~~C~~~~-------~~~~~~~~-~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~   72 (117)
                      +.+.+...|....       .....+|+ ...+..+.|.+|+|+||+++     ++++||+|++..|..  .|.+|++++
T Consensus       149 ~~~~~~~~C~~~~~~~~~~~~~~~~~c~~~~~~~~~~C~gDsGgPl~~~-----~~l~Gi~S~g~~c~~~~~p~vftrvs  223 (240)
T d1mzaa_         149 VTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICK-----GVFHAIVSGGHECGVATKPGIYTLLT  223 (240)
T ss_dssp             EEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEET-----TEEEEEECSSCCSSCTTCCEEEEECC
T ss_pred             EEEecHHHhhhhhhccCCcccccceEEeccCCCCccCccCCCCCeEEEC-----CEEEEEEEeCCCCCCCCCCeEEEEEH
Confidence            4455666665422       11222444 34556889999999999975     369999999978866  889999997


Q ss_pred             -cchHHHHhhccC
Q psy7307          73 -KYLRWIYNTAKG   84 (117)
Q Consensus        73 -~~~~wi~~~~~g   84 (117)
                       .|.+||+++++.
T Consensus       224 ~~y~~WI~~~i~~  236 (240)
T d1mzaa_         224 KKYQTWIKSNLVP  236 (240)
T ss_dssp             HHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHccC
Confidence             689999999864

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.15  E-value=3.9e-11  Score=78.01  Aligned_cols=76  Identities=32%  Similarity=0.658  Sum_probs=55.6

Q ss_pred             eeeccccccCC---cccccceeec-CCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHH
Q psy7307           4 CLVLVLICAAH---QLVRADYDVF-NRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRW   77 (117)
Q Consensus         4 ~~~~~~~C~~~---~~~~~~~~~~-~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~w   77 (117)
                      .+.+.+.|...   .+....+|+. ..+..+.|.+|+|+||+++     +.++||+|++..|..  .|.+|+++..|.+|
T Consensus       141 ~~~~~~~C~~~~~~~~~~~~~c~~~~~~~~~~~~gd~g~pl~~~-----~~L~Gi~S~g~~c~~~~~p~vyt~v~~~~~W  215 (223)
T d1hj9a_         141 PILSDSSCKSAYPGQITSNMFCAYGLEGKGDSCQGDSGGPVVCS-----GKLQGIVSWGSGCQAKNKPGVYTKVCNYVSW  215 (223)
T ss_dssp             ECCCHHHHHHHSTTTCCTTEEECCCCCCCCCCCTTCTTCEEEET-----TEEEEEEEECSCCCCCCCCCEEEEGGGGHHH
T ss_pred             eecCHHHHHHHhCCcccccceEEeecCCCcccccCCCCceeEEe-----CEEEEEEEEcCCCCCCCCCEEEEEHHHHHHH
Confidence            34445555431   1223333443 4456789999999999975     469999999877765  78999999999999


Q ss_pred             HHhhccC
Q psy7307          78 IYNTAKG   84 (117)
Q Consensus        78 i~~~~~g   84 (117)
                      |++++++
T Consensus       216 I~~~i~~  222 (223)
T d1hj9a_         216 IKQTIAS  222 (223)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHhc
Confidence            9998875

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.15  E-value=2e-11  Score=79.68  Aligned_cols=77  Identities=35%  Similarity=0.620  Sum_probs=57.6

Q ss_pred             eeeeccccccCC---cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchH
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLR   76 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~   76 (117)
                      +.+.+...|...   .+....+|+.. ......|.+|+|+||+.+     +.++||+|++..|..  .|.+|+++..|.+
T Consensus       140 ~~~~~~~~C~~~~~~~~~~~~~C~~~~~~~~~~c~gd~g~pl~~~-----~~L~Gi~s~~~~~~~~~~p~vft~v~~~~~  214 (223)
T d1j16a_         140 APLLPQADCEASSSFIITDNMVCVGFLEGGKDACQGDSGGPVVCN-----GELQGIVSWGYGCALPDNPGVYTKVCNYVD  214 (223)
T ss_dssp             EEEECHHHHHSSSSCCCCTTEEEESCTTCSCBCCTTCTTCEEEET-----TEEEEEEEECSSSSCTTCCEEEEEGGGGHH
T ss_pred             EEEEEhhHhhccccceeCCCceEEecCCCCCcccCCccCCcEEEe-----eEEEEEEEEccCCCCCCCCEEEEEhHHhHH
Confidence            445556666542   12333456533 456789999999999975     369999999977775  8899999999999


Q ss_pred             HHHhhccC
Q psy7307          77 WIYNTAKG   84 (117)
Q Consensus        77 wi~~~~~g   84 (117)
                      ||++++++
T Consensus       215 WI~~~i~~  222 (223)
T d1j16a_         215 WIQDTIAA  222 (223)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhc
Confidence            99998864

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=1.3e-11  Score=80.59  Aligned_cols=75  Identities=31%  Similarity=0.616  Sum_probs=58.1

Q ss_pred             eeeeccccccC---CcccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCC-CCC--CCceeeecccchH
Q psy7307           3 LCLVLVLICAA---HQLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGK--TPGVYVQVNKYLR   76 (117)
Q Consensus         3 ~~~~~~~~C~~---~~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~-C~~--~p~~~t~v~~~~~   76 (117)
                      +.+.++..|..   ..+....+|+......+.|.+|+|+||+++     ++++||+|++.. |.+  .|.+|+++..|.+
T Consensus       144 ~~~~~~~~C~~~~~~~~~~~~~C~~~~~~~~~c~gd~G~pl~~~-----~~l~Gi~S~g~~~c~~~~~p~vyt~V~~~~~  218 (225)
T d1npma_         144 VKIYSQNKCERAYPGKITEGMVCAGSSNGADTCQGDSGGPLVCD-----GMLQGITSWGSDPCGKPEKPGVYTKICRYTT  218 (225)
T ss_dssp             EEECCHHHHHHHSTTTCCTTEEEEECTTCCBCCTTCTTCEEEET-----TEEEEEEEECCSSSCBTTBCEEEEEHHHHHH
T ss_pred             EEEecHHHHhhhccCCcCCCEEEecCCCCCccccCCCCceEEEc-----cEEEEEEEECCCCCCCCCCCEEEEEHHHHHH
Confidence            44555666643   224445578877788899999999999975     479999999743 654  7899999999999


Q ss_pred             HHHhhc
Q psy7307          77 WIYNTA   82 (117)
Q Consensus        77 wi~~~~   82 (117)
                      ||++++
T Consensus       219 WI~~~i  224 (225)
T d1npma_         219 WIKKTM  224 (225)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            999876

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.15  E-value=4.2e-11  Score=78.39  Aligned_cols=78  Identities=27%  Similarity=0.500  Sum_probs=58.8

Q ss_pred             eeeeccccccCC---cccccceeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAH---QLVRADYDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~---~~~~~~~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+..-|...   ......+|+.. ...++.|.+|+|+||+++     ++++||+|++. .|.+  .|.+|+++..|.
T Consensus       150 ~~~~~~~~C~~~~~~~~~~~~~c~~~~~~~~~~c~gdsG~Pl~~~-----~~l~Gi~S~g~~~c~~~~~p~vyt~v~~y~  224 (235)
T d1tona_         150 IHLLSNEKCIETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLICD-----GVLQGITSGGATPCAKPKTPAIYAKLIKFT  224 (235)
T ss_dssp             EEEECGGGCGGGGSTTGGGGEEEEECTTCSCBCCTTCTTCEEEET-----TEEEEEECCCCSSCSCTTCCEEEEEGGGGH
T ss_pred             eeeeCHHHHHHHhCCCCCCCceEeCcCCCCccccCCCcCCeEEEc-----CEEEEEEEeCCCCCCCCCCCeEEEEHHHHH
Confidence            344556667652   23334467644 557789999999999974     57999999975 5754  889999999999


Q ss_pred             HHHHhhccCC
Q psy7307          76 RWIYNTAKGD   85 (117)
Q Consensus        76 ~wi~~~~~gd   85 (117)
                      +||++.++++
T Consensus       225 ~WI~~~i~~~  234 (235)
T d1tona_         225 SWIKKVMKEN  234 (235)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHC
Confidence            9999998754

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.14  E-value=3.9e-11  Score=78.17  Aligned_cols=76  Identities=30%  Similarity=0.466  Sum_probs=56.9

Q ss_pred             eeeeccccccCCccc----ccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHHH
Q psy7307           3 LCLVLVLICAAHQLV----RADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWI   78 (117)
Q Consensus         3 ~~~~~~~~C~~~~~~----~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi   78 (117)
                      +.+.+...|......    ....|.......+.|.+|+|+||+++     ++++||+|++..|...|.+|+++..|.+||
T Consensus       145 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~c~~dsGgpl~~~-----~~l~Gi~s~g~~~~~~p~vft~V~~y~~WI  219 (224)
T d1eufa_         145 LEVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDSGGPLVCN-----GVAQGIVSYGRNDGTTPDVYTRISSFLSWI  219 (224)
T ss_dssp             EEBCCTHHHHTTCTTCCTTTEEEESCTTSCCBCCTTCTTCEEEET-----TEEEEEEEECCTTCCSCEEEEEGGGTHHHH
T ss_pred             eccCCHHHHHHHhccccccceeeeeccccccccccCCCCCeEEEc-----CEEEEEEEEcCCCCCCCeEEEEHHHHHHHH
Confidence            345566667552211    11134455677889999999999975     379999999977766899999999999999


Q ss_pred             Hhhcc
Q psy7307          79 YNTAK   83 (117)
Q Consensus        79 ~~~~~   83 (117)
                      ++++|
T Consensus       220 ~~~ik  224 (224)
T d1eufa_         220 HSTMR  224 (224)
T ss_dssp             HHHTC
T ss_pred             HHHhC
Confidence            99875

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=6.8e-11  Score=77.85  Aligned_cols=59  Identities=37%  Similarity=0.836  Sum_probs=49.6

Q ss_pred             CCCCCCcccCCCCCeeEEEcC-CCcEEEEEEeecCC-CCCC--CCceeeecccchHHHHhhcc
Q psy7307          25 NRTSRQAQTGDSGGPLLLQRP-DKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        25 ~~~~~~~C~~dsG~pl~~~~~-~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .....+.|.+|+|+||+.... .++|+++||+|++. .|..  .|.+|+++..|.+||+++++
T Consensus       178 ~~~~~~~c~gdsGgpl~~~~~~~~~~~l~Gi~S~g~~~c~~~~~p~vft~v~~~~~WI~~~v~  240 (242)
T d1q3xa1         178 ESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS  240 (242)
T ss_dssp             SSCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             cCCCccccccccccceEEeeCCCCeEEEEEEEEeCCCCCCCCCCCEEEEEHHHhHHHHHHHHH
Confidence            345678999999999988643 47899999999974 5764  88999999999999999875

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

Probab=99.14  E-value=2.6e-11  Score=78.99  Aligned_cols=74  Identities=31%  Similarity=0.591  Sum_probs=54.3

Q ss_pred             eeeeccccccCCc----ccccce-eecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAHQ----LVRADY-DVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~~----~~~~~~-~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|....    .....+ +.......+.|.+|+|+||++.    .|+++||+|++..|..  .|.+|+++..|.
T Consensus       142 v~~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~c~~dsG~pl~~~----~~~l~GI~S~g~~c~~~~~p~vyt~v~~y~  217 (224)
T d1gdna_         142 VPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGGPIVDS----SNTLIGAVSWGNGCARPNYSGVYASVGALR  217 (224)
T ss_dssp             EEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEECT----TCCEEEEEEECSSSSCTTCCEEEEETTTTH
T ss_pred             EEEeCHHHHhcccccCccccceeeeecCCCCccccccccCCceEec----CCEEEEEEEeCCCCCCCCCCEEEEEHHHHH
Confidence            4566666675421    111122 3345667789999999999853    3679999999978865  789999999999


Q ss_pred             HHHHh
Q psy7307          76 RWIYN   80 (117)
Q Consensus        76 ~wi~~   80 (117)
                      +||++
T Consensus       218 ~WIe~  222 (224)
T d1gdna_         218 SFIDT  222 (224)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2.8e-11  Score=79.19  Aligned_cols=77  Identities=34%  Similarity=0.596  Sum_probs=56.5

Q ss_pred             eeeeccccccCCc-------ccccceeecCC-CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC--CCceeee
Q psy7307           3 LCLVLVLICAAHQ-------LVRADYDVFNR-TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK--TPGVYVQ   70 (117)
Q Consensus         3 ~~~~~~~~C~~~~-------~~~~~~~~~~~-~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~--~p~~~t~   70 (117)
                      +.+.+...|....       .....+|+... ...+.|.+|+|+||+++     +.++||.|++.  .|.+  .|.+|++
T Consensus       143 ~~~~~~~~C~~~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsG~Pl~~~-----~~l~GI~S~g~~~~c~~~~~p~vyt~  217 (232)
T d1orfa_         143 ITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCE-----GVFRGVTSFGLENKCGDPRGPGVYIL  217 (232)
T ss_dssp             EEEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEET-----TEEEEEEEECCTTCTTCTTSCEEEEE
T ss_pred             eecCCHHHHhhhhhcccCccccCceEEeccCCCCcccccccCCCeEEEc-----CEEEEEEEEECCCCCCCCCCCcEEEE
Confidence            4556666775421       22233566544 46789999999999975     36999999863  4755  7899999


Q ss_pred             cc-cchHHHHhhccC
Q psy7307          71 VN-KYLRWIYNTAKG   84 (117)
Q Consensus        71 v~-~~~~wi~~~~~g   84 (117)
                      ++ .|.+||+++++|
T Consensus       218 Vs~~y~~WI~~~i~g  232 (232)
T d1orfa_         218 LSKKHLNWIIMTIKG  232 (232)
T ss_dssp             CCHHHHHHHHHHHCC
T ss_pred             eeHHHHHHHHHHhCC
Confidence            96 689999999875

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

Probab=99.12  E-value=3.9e-11  Score=78.39  Aligned_cols=78  Identities=22%  Similarity=0.384  Sum_probs=59.4

Q ss_pred             ceeeeccccccC--CcccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCC--CC-CCceeeecccchH
Q psy7307           2 SLCLVLVLICAA--HQLVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGC--GK-TPGVYVQVNKYLR   76 (117)
Q Consensus         2 ~~~~~~~~~C~~--~~~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C--~~-~p~~~t~v~~~~~   76 (117)
                      ++.+.+...|..  ........|......++.|.+|+|+||++.     ++++||+|++..|  .. .|.+|+++..|.+
T Consensus       142 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~c~gdsG~Pl~~~-----~~l~Gi~S~g~~~~~~~~~p~v~t~v~~y~~  216 (226)
T d1azza_         142 DVPIMSNADCDAVYGIVTDGNICIDSTGGKGTCNGDSGGPLNYN-----GLTYGITSFGAAAGCEAGYPDAFTRVTYFLD  216 (226)
T ss_dssp             CEEEECHHHHHHHHSCCCTTEEEECCTTTCBCCTTCTTCEEEET-----TEEEEEEEEEETTCTTSCCCEEEEESGGGHH
T ss_pred             EEEEEeHHHhhhhhCcccccceeccccCCCccccCCcCCCEEEc-----CEEEEEEEEeCCCCCCCCCCEEEEEHHHhHH
Confidence            456667777755  223344456666778899999999999864     4699999987554  33 7899999999999


Q ss_pred             HHHhhccC
Q psy7307          77 WIYNTAKG   84 (117)
Q Consensus        77 wi~~~~~g   84 (117)
                      ||++.+.-
T Consensus       217 WI~~~~g~  224 (226)
T d1azza_         217 WIQTQTGI  224 (226)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            99998753

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.11  E-value=3.5e-11  Score=78.55  Aligned_cols=55  Identities=38%  Similarity=0.689  Sum_probs=47.2

Q ss_pred             cCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhcc
Q psy7307          24 FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        24 ~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~   83 (117)
                      ......+.|.+|+|+||+++     ++++||+|++..|...|.+|+++..|.+||+++++
T Consensus       172 ~~~~~~~~c~gdsGgPl~~~-----~~l~Gi~S~g~~~~~~p~vyt~v~~y~~WI~~~i~  226 (227)
T d1fi8a_         172 DPKIKRASFRGDSGGPLVCK-----KVAAGIVSYGQNDGSTPRAFTKVSTFLSWIKKTMK  226 (227)
T ss_dssp             CTTSCCBCCTTCTTSEEEET-----TEEEEEEEEEETTCCSCEEEEEGGGGHHHHHHHHC
T ss_pred             eccccCCCcCCCcCCEEEEC-----CEEEEEEEEcCCCCCCCeEEEEHHHHHHHHHHHHc
Confidence            34456789999999999974     47999999986676688999999999999999876

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.10  E-value=8.4e-11  Score=76.73  Aligned_cols=76  Identities=32%  Similarity=0.474  Sum_probs=57.7

Q ss_pred             ceeeeccccccCCc--ccccceee-cCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHHH
Q psy7307           2 SLCLVLVLICAAHQ--LVRADYDV-FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWI   78 (117)
Q Consensus         2 ~~~~~~~~~C~~~~--~~~~~~~~-~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi   78 (117)
                      ++.+.+...|....  .....+|. ........|.+|+|+||+++     ++++||+|++..|...|.+|+++..|.+||
T Consensus       145 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~c~~d~G~Pl~~~-----~~l~Gi~S~g~~~~~~p~vyt~v~~~~~WI  219 (224)
T d3rp2a_         145 ELRIMDEKACVDYRYYEYKFQVCVGSPTTLRAAFMGDSGGPLLCA-----GVAHGIVSYGHPDAKPPAIFTRVSTYVPWI  219 (224)
T ss_dssp             EEEEECGGGTTTTTCCCTTTEEEECCTTSCCBCCTTTTTCEEEET-----TEEEEEEEECCTTCCSCEEEEEHHHHHHHH
T ss_pred             EEEccCHHHhhhcccccccceeeeccCcccccCcCCCcCCeEEEc-----CEEEEEEEECCCCCCCCeEEEEHHHHHHHH
Confidence            45667788887632  22333444 34466788999999999975     479999999955555899999999999999


Q ss_pred             Hhhc
Q psy7307          79 YNTA   82 (117)
Q Consensus        79 ~~~~   82 (117)
                      ++.+
T Consensus       220 ~~vi  223 (224)
T d3rp2a_         220 NAVI  223 (224)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9875

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=5.6e-11  Score=77.53  Aligned_cols=79  Identities=29%  Similarity=0.498  Sum_probs=59.1

Q ss_pred             ceeeeccccccCCc---ccccce-eecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccc
Q psy7307           2 SLCLVLVLICAAHQ---LVRADY-DVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKY   74 (117)
Q Consensus         2 ~~~~~~~~~C~~~~---~~~~~~-~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~   74 (117)
                      ++.+.+...|....   .....+ |....+....|.+|+|+||+++     ++++||+|++. .|..  .|++|+++..|
T Consensus       142 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~pl~~~-----~~l~Gv~S~g~~~c~~~~~p~vyt~V~~~  216 (228)
T d1sgfa_         142 NLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICD-----GILQGITSWGPEPCGEPTEPSVYTKLIKF  216 (228)
T ss_dssp             EEEEECTHHHHTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEET-----TEEEEEECCCCSSCCCSSCCEEEEESGGG
T ss_pred             EEEEeCHHHhhhhccCCcccceEEeccCCCCccccCCCcCCcEEEe-----CEEEEEEEECCCCCCCCCCCeEEEEHHHH
Confidence            35677777785522   122233 4444556789999999999975     47999999974 5654  89999999999


Q ss_pred             hHHHHhhccCC
Q psy7307          75 LRWIYNTAKGD   85 (117)
Q Consensus        75 ~~wi~~~~~gd   85 (117)
                      .+||+++++++
T Consensus       217 ~~WI~~~i~~n  227 (228)
T d1sgfa_         217 SSWIRETMANN  227 (228)
T ss_dssp             HHHHHHHHHSC
T ss_pred             HHHHHHHHhHC
Confidence            99999999865

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=4.9e-11  Score=78.26  Aligned_cols=58  Identities=31%  Similarity=0.606  Sum_probs=48.0

Q ss_pred             cCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccchHHHHhhccCCC
Q psy7307          24 FNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYLRWIYNTAKGDS   86 (117)
Q Consensus        24 ~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~~~wi~~~~~gds   86 (117)
                      ......+.|.+|+|+||+.+     ++++||+|++. .|..  .|.+|+++..|.+||++.++.+|
T Consensus       177 ~~~~~~~~c~gdsG~pl~~~-----~~l~Gi~S~g~~~c~~~~~p~vft~V~~y~~WI~~~i~~n~  237 (237)
T d1ao5a_         177 EMGGGKDTCRDDSGGPLICD-----GILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMMKNA  237 (237)
T ss_dssp             CTTCSCBCCTTCTTCEEEET-----TEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHHHHCC
T ss_pred             cCCCCCcccCCCCCCeeEEc-----cEEEEEEEEecCCCCCCCCCeEEEEHHHHHHHHHHHHHhcC
Confidence            34456789999999999965     47999999974 4754  78999999999999999987554

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

Probab=99.07  E-value=2.2e-10  Score=74.71  Aligned_cols=61  Identities=30%  Similarity=0.580  Sum_probs=50.2

Q ss_pred             eeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC--CCCC--CCceeeecccchHHHHhhc
Q psy7307          21 YDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI--GCGK--TPGVYVQVNKYLRWIYNTA   82 (117)
Q Consensus        21 ~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~--~C~~--~p~~~t~v~~~~~wi~~~~   82 (117)
                      +|.........|.+|+|+||++.. +++|+++||.|++.  .|.+  .|.+|+++..|.+||++++
T Consensus       172 ~~~~~~~~~~~c~gdsGgpl~~~~-~~~~~l~GI~s~~~~~~c~~~~~p~vyt~v~~y~~WI~~vi  236 (236)
T d1elta_         172 MVCAGGGANSGCNGDSGGPLNCQV-NGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGIM  236 (236)
T ss_dssp             EEEECCSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHHHC
T ss_pred             eeecCCccccccccccccceEEEE-CCeEEEEEEEEEeCCCCCCCCCCCEEEEEHHHHHHHHHHhC
Confidence            444455667899999999999874 57899999999853  5765  7899999999999999863

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.06  E-value=5.6e-11  Score=77.79  Aligned_cols=80  Identities=28%  Similarity=0.412  Sum_probs=59.9

Q ss_pred             ceeeeccccccCCc---ccccce-eecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccc
Q psy7307           2 SLCLVLVLICAAHQ---LVRADY-DVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKY   74 (117)
Q Consensus         2 ~~~~~~~~~C~~~~---~~~~~~-~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~   74 (117)
                      ++.+.+...|....   .....+ |.......+.|.+|+|+||+++     +.++||.|++. .|..  .|.+|+++..|
T Consensus       151 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~gdsG~pl~~~-----~~l~Gv~s~g~~~c~~~~~p~v~t~v~~y  225 (237)
T d1gvza_         151 ELRLQSNEKCARAYPEKMTEFVLCATHRDDSGSICLGDSGGALICD-----GVFQGITSWGYSECADFNDNFVFTKVMPH  225 (237)
T ss_dssp             EEEEECGGGGCSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEEET-----TEEEEEECCCSSSCEETTTSCCEEESGGG
T ss_pred             EEEeecHHHHHhhcccccccccccceecccccccccCCCCCcEEEc-----CEEEEEEEeccCCCCCCCCCeEEEEHHHH
Confidence            35567788887632   122223 4445568899999999999975     47999999975 4543  78999999999


Q ss_pred             hHHHHhhccCCC
Q psy7307          75 LRWIYNTAKGDS   86 (117)
Q Consensus        75 ~~wi~~~~~gds   86 (117)
                      .+||++.++.+|
T Consensus       226 ~~WI~~~i~~~~  237 (237)
T d1gvza_         226 KKWIKETIEKNS  237 (237)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcC
Confidence            999999987654

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=1.9e-10  Score=74.80  Aligned_cols=76  Identities=34%  Similarity=0.618  Sum_probs=56.0

Q ss_pred             eeeeccccccCCc----ccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAHQ----LVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~~----~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|....    ......|.........|.+|+|+||+++   .  +++||+|++. .|..  .|.+|+++..|.
T Consensus       139 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~c~gd~G~Pl~~~---~--~l~Gi~S~g~~~c~~~~~p~vyt~v~~~~  213 (221)
T d1lo6a_         139 IHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCG---D--HLRGLVSWGNIPCGSKEKPGVYTNVCRYT  213 (221)
T ss_dssp             EEEECHHHHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTCEEEET---T--EEEEEEEECCSSCCCSSSCEEEEEGGGGH
T ss_pred             EEEecHHHHHHHcCCCccCCceeeeccccCCCCccCCCCCcEEEC---C--EEEEEEEEccCCCCCCCCCeEEEEHHHHH
Confidence            4455566665421    1222345556678889999999999976   2  6999999975 4654  789999999999


Q ss_pred             HHHHhhcc
Q psy7307          76 RWIYNTAK   83 (117)
Q Consensus        76 ~wi~~~~~   83 (117)
                      +||+++++
T Consensus       214 ~WI~~~ik  221 (221)
T d1lo6a_         214 NWIQKTIQ  221 (221)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99999864

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=2.1e-10  Score=74.31  Aligned_cols=75  Identities=31%  Similarity=0.561  Sum_probs=56.2

Q ss_pred             eeeeccccccCCc----ccccceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccch
Q psy7307           3 LCLVLVLICAAHQ----LVRADYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYL   75 (117)
Q Consensus         3 ~~~~~~~~C~~~~----~~~~~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~~   75 (117)
                      +.+.+...|....    ......|.......+.|.+|+|+||+++     ++++||+|++. .|..  .|.+|+++..|.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsG~Pl~~~-----~~LvGi~S~g~~~c~~~~~p~v~t~v~~~~  220 (228)
T d1bioa_         146 LPVLDRATCNRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCG-----GVLEGVVTSGSRVCGNRKKPGIYTRVASYA  220 (228)
T ss_dssp             EEEECHHHHHSTTTTTTCCCTTEEEECCSSCBCCTTTTTCEEEET-----TEEEEEECCSCCCSSCTTSCEEEEEGGGGH
T ss_pred             EEEeCHHHHhhhhcccccccccceeecccCCCcccCCcCccEEEc-----CEEEEEEEECCCCCCCCCCCEEEEEHHHHH
Confidence            3455555554421    2233356777788899999999999975     47999999963 5754  789999999999


Q ss_pred             HHHHhhc
Q psy7307          76 RWIYNTA   82 (117)
Q Consensus        76 ~wi~~~~   82 (117)
                      +||++++
T Consensus       221 ~WI~~~i  227 (228)
T d1bioa_         221 AWIDSVL  227 (228)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999875

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=2.8e-11  Score=79.03  Aligned_cols=77  Identities=25%  Similarity=0.399  Sum_probs=57.8

Q ss_pred             ceeeeccccccCCc----ccccc-eeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchH
Q psy7307           2 SLCLVLVLICAAHQ----LVRAD-YDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLR   76 (117)
Q Consensus         2 ~~~~~~~~~C~~~~----~~~~~-~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~   76 (117)
                      ++.+.+...|....    ..... .|.......+.|.+|+|+||+++     ++++||+|++..|...|.+|+++..|.+
T Consensus       144 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsG~pl~~~-----~~l~GI~s~g~~~~~~p~vyt~v~~y~~  218 (227)
T d1fq3a_         144 KMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCN-----KVAQGIVSYGRNNGMPPRACTKVSSFVH  218 (227)
T ss_dssp             EEECCCHHHHTTTCTTTCCTTTEECCSCTTSSCBCCTTCTTCBCBSS-----SSCCCEECCCCTTSCSCCCEECHHHHHH
T ss_pred             EEEEEcHHHhhhhhcccccccceeeeeccccccccccCCCCceEEEe-----CEEEEEEEEcCCCCCCCcEEEEHHHHHH
Confidence            45666777775532    11111 34455567889999999999864     4699999999777668889999999999


Q ss_pred             HHHhhcc
Q psy7307          77 WIYNTAK   83 (117)
Q Consensus        77 wi~~~~~   83 (117)
                      ||+++++
T Consensus       219 WI~~~i~  225 (227)
T d1fq3a_         219 WIKKTMK  225 (227)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHH
Confidence            9999876

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=3.6e-10  Score=73.16  Aligned_cols=58  Identities=34%  Similarity=0.634  Sum_probs=48.4

Q ss_pred             eeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccchHHHHhhcc
Q psy7307          21 YDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        21 ~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .+.......+.|.+|+|+||++.     ++++||.|++. +|..  +|.+|+++..|.+||+++++
T Consensus       161 ~~~~~~~~~~~c~gd~G~pl~~~-----~~l~Gi~s~~~~gc~~~~~p~vyt~v~~~~~WI~~~ik  221 (221)
T d1fuja_         161 CTFVPRRKAGICFGDSGGPLICD-----GIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTLR  221 (221)
T ss_dssp             EEECSSSSCBCCTTCTTCEEEET-----TEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred             eeccccCCCceeCCccCCCEEEe-----CEEEEEEEEEECCCCCCCCCeEEEEHHHhHHHHHHHhC
Confidence            44456678899999999999975     37999999974 5754  88999999999999999865

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=2.3e-10  Score=74.03  Aligned_cols=52  Identities=29%  Similarity=0.572  Sum_probs=44.0

Q ss_pred             CCCCcccCCCCCeeEEEcCCCcEEEEEEeecC-CCCCC--CCceeeecccchHHHHhhcc
Q psy7307          27 TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWG-IGCGK--TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        27 ~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~-~~C~~--~p~~~t~v~~~~~wi~~~~~   83 (117)
                      ...+.|.+|+|+||+++     +.++||.||+ ..|.+  .|.+|+++..|.+||+++++
T Consensus       164 ~~~~~C~gdsG~Pl~~~-----~~l~GI~s~~~~~c~~~~~p~vft~v~~~~~WI~~~i~  218 (218)
T d2z7fe1         164 RQAGVCFGDSGSPLVCN-----GLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSIIQ  218 (218)
T ss_dssp             SCCBCCTTCTTCEEEET-----TEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred             cccCccccccCCCEEEC-----CEEEEEEEEecCCCCCCCcCEEEEEhHHhHHHHHHHhC
Confidence            45678999999999975     4699999985 35765  78999999999999999864

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

Probab=98.98  E-value=4.6e-10  Score=73.23  Aligned_cols=61  Identities=31%  Similarity=0.566  Sum_probs=51.2

Q ss_pred             ceeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCC--CCC-CCceeeecccchHHHHhhcc
Q psy7307          20 DYDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG--CGK-TPGVYVQVNKYLRWIYNTAK   83 (117)
Q Consensus        20 ~~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~--C~~-~p~~~t~v~~~~~wi~~~~~   83 (117)
                      .+|.......+.|.+|+|+|+++.   ++|+++||+|++..  |.. .|.+|+++..|.+||++.+.
T Consensus       164 ~~~~~~~~~~~~~~gdsGgp~~~~---~~~~l~Gi~S~~~~~~~~~~~p~vyt~V~~y~~WI~~~~~  227 (230)
T d2hlca_         164 TICGDTSDGKSPCFGDSGGPFVLS---DKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQNTG  227 (230)
T ss_dssp             EEEECCTTSCBCCTTCTTCEEEEG---GGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHHHC
T ss_pred             ceEeccccCccccccccCCCeEEC---CCeEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHHHhC
Confidence            356667778899999999999986   57899999998643  444 88999999999999999775

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

Probab=98.90  E-value=2.9e-09  Score=69.37  Aligned_cols=59  Identities=36%  Similarity=0.583  Sum_probs=46.5

Q ss_pred             eeecCCCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC----CCC-C-CCceeeecccchHHHHhh
Q psy7307          21 YDVFNRTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI----GCG-K-TPGVYVQVNKYLRWIYNT   81 (117)
Q Consensus        21 ~~~~~~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~----~C~-~-~p~~~t~v~~~~~wi~~~   81 (117)
                      .|.......+.|.+|+|+||++..  +.+.++||+++..    .|. . .|.+|+++..|.+||++.
T Consensus       176 ~~~~~~~~~~~~~g~sGgpl~~~~--~~~~l~Gi~s~~~~~g~~~~~~~~p~vft~V~~y~~WI~~n  240 (241)
T d1m9ua_         176 CVQDPAGNTGACNGDSGGPLNCPD--GGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGDN  240 (241)
T ss_dssp             EECCTTSCCBCCTTCTTCEEEEES--SSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHHH
T ss_pred             EeecccCCcCcccCCCCcceEEec--CCEEEEEEEEEEEcCCCCCCCCCCCEEEEEHHHhHHHHHHc
Confidence            344455678899999999999874  5678999988643    343 3 789999999999999864

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

Probab=98.90  E-value=1.6e-09  Score=70.79  Aligned_cols=57  Identities=37%  Similarity=0.816  Sum_probs=48.7

Q ss_pred             CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC-CCCC--CCceeeecccchHHHHhhccCCCC
Q psy7307          26 RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI-GCGK--TPGVYVQVNKYLRWIYNTAKGDSG   87 (117)
Q Consensus        26 ~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~-~C~~--~p~~~t~v~~~~~wi~~~~~gdsg   87 (117)
                      ....+.|.+|+|+||+..     +.++||+|++. .|..  .|.+|+++..|.+||++.+++++-
T Consensus       170 ~~~~~~~~g~~G~Pl~~~-----~~l~Gi~S~g~~~c~~~~~p~vft~v~~y~~WI~~~i~~~~~  229 (234)
T d1op0a_         170 QGGKDTCGGDSGGPLICN-----GQFQGIVSYGAHPCGQGPKPGIYTNVFDYTDWIQRNIAGNTD  229 (234)
T ss_dssp             TCCCBCCTTCTTCEEEET-----TEEEEEEEECCSSTTCTTSCEEEEESGGGHHHHHHHHHTCTT
T ss_pred             ccccccccCCCCceEEEc-----CEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHHhhcCC
Confidence            457889999999999865     46999999974 5765  789999999999999999988774

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

Probab=98.57  E-value=9e-09  Score=68.61  Aligned_cols=58  Identities=21%  Similarity=0.241  Sum_probs=40.4

Q ss_pred             eeecC-CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC----CCCC-CCceeeecccchHHHHhhc
Q psy7307          21 YDVFN-RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI----GCGK-TPGVYVQVNKYLRWIYNTA   82 (117)
Q Consensus        21 ~~~~~-~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~----~C~~-~p~~~t~v~~~~~wi~~~~   82 (117)
                      +|+.. .+..+.|.||||+||+++.  ++  ++|+++++.    .|.. +|.+|+|+..|..|+....
T Consensus       178 ~c~~~~~~~~~~c~GDSGGPL~~~~--g~--~vGvvsgg~s~c~~c~~~~p~vYtrV~~~~~~~~~~~  241 (263)
T d1arba_         178 LNVQWQPSGGVTEPGSSGSPIYSPE--KR--VLGQLHGGPSSCSATGTNRSDQYGRVFTSWTGGGAAA  241 (263)
T ss_dssp             EEEECCTTSCCCCTTCTTCEEECTT--SC--EEEEEEECSCCTTCCGGGSEEEEEEHHHHHHTTSSGG
T ss_pred             EEEEecCCCccccCCCCcceEEecC--CC--EEEEEEEEEeCCcCCCCCCCceEEEEEEeeccCCcch
Confidence            44443 3466899999999998653  43  677777763    3444 8999999988766664433

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1e-07  Score=64.19  Aligned_cols=33  Identities=45%  Similarity=1.033  Sum_probs=27.6

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCc--ccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCA  112 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~  112 (117)
                      .++|+|||||||++. .+++|+|+||+|||.  +|.
T Consensus       215 ~~~C~GDSGgPL~~~-~~~~~~lvGI~S~G~~~~~~  249 (287)
T d1rrka1         215 PNTCRGDSGGPLIVH-KRSRFIQVGVISWGVVDVCK  249 (287)
T ss_dssp             CCCCGGGTTCEEEEE-ETTEEEEEEEEEEESCCCC-
T ss_pred             CCCCCCCccCCeEEe-cCCeEEEEEEEEecCCcCcC
Confidence            467999999999998 578899999999985  454

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.21  E-value=3e-07  Score=59.46  Aligned_cols=65  Identities=32%  Similarity=0.487  Sum_probs=42.8

Q ss_pred             cEEEEEEeecCCCCCC-C-C-cee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcc--ccc
Q psy7307          48 QWTIIGVVSWGIGCGK-T-P-GVY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG--CAQ  113 (117)
Q Consensus        48 ~~~~vgI~s~~~~C~~-~-p-~~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~--C~~  113 (117)
                      ++..+.+++.. .|.+ . + ...  ..++.......+.|.+|+|+||++++.+++|+|+||+|||..  |+.
T Consensus       146 ~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~~C~gdsGgPl~~~~~~~~~~L~Gi~S~g~~~~c~~  217 (241)
T d1brup_         146 QQGQLLVVDYA-TCSKPGWWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNY  217 (241)
T ss_dssp             EEEEEEEECHH-HHTSTTTTGGGCCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSC
T ss_pred             eEEEEEEeCHH-HhCccccccccccccceeecCCCCccccCCCcccceEEEcCCCCEEEEEEEEECCCCCCCC
Confidence            44555566555 6765 1 1 111  112223333467899999999999878889999999999874  554

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=3.5e-07  Score=60.04  Aligned_cols=68  Identities=28%  Similarity=0.536  Sum_probs=46.6

Q ss_pred             CcEEEEEEeecCCCCCC-C-C-cee---eecccchHHHHhhccCCCCCceeecc---CCCcEEEEEeeeeCccccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T-P-GVY---VQVNKYLRWIYNTAKGDSGGPLLLQR---PDKQWTIIGVVSWGIGCAQVL  115 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~-p-~~~---t~v~~~~~wi~~~~~gdsg~pl~~~~---~~~~~~l~Gi~s~~~~C~~~~  115 (117)
                      .++..+.+++.. .|.+ + . ...   .-++.+.....+.|.+|+|+||++..   ..++|+|+||+||+.+|+...
T Consensus       147 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~~~c~gdsGgPl~~~~~~~~~~~~~l~Gi~S~g~~c~~~~  223 (255)
T d1z8ga1         147 LQEARVPIISND-VCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQ  223 (255)
T ss_dssp             CEEEEEEEECHH-HHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTT
T ss_pred             eEEEEEEEeCHH-HhhhhhccCccccCcceEEecCCCCcccccCccccceEEecCCCCCCcEEEEEEEEECCCCCCCC
Confidence            455666777665 6764 1 1 111   12344445556789999999999875   356899999999999988743

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=98.12  E-value=1.1e-06  Score=56.72  Aligned_cols=39  Identities=41%  Similarity=0.909  Sum_probs=33.7

Q ss_pred             HHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          76 RWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        76 ~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ....+.|.+|+|+||++.+..++|+|+||+||+..|+..
T Consensus       162 ~~~~~~c~~~~G~pl~~~~~~~~~~L~Gi~s~~~~c~~~  200 (223)
T d1os8a_         162 TGGVDTCQGDSGGPMFRKDNADEWIQVGIVSWGYGCARP  200 (223)
T ss_dssp             TCCCBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCT
T ss_pred             cCCcCccccccccceEEecCCCeEEEEEEEEeCCCCCCC
Confidence            344577999999999998778899999999999999764

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=1.2e-06  Score=57.06  Aligned_cols=38  Identities=47%  Similarity=0.716  Sum_probs=33.1

Q ss_pred             HHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          77 WIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        77 wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ...+.|.+|+|+||++.+.+++|+|.||+||+.+|+..
T Consensus       182 ~~~~~c~gd~G~pl~~~~~~g~~~L~Gi~s~~~~c~~~  219 (241)
T d1eaxa_         182 GGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQR  219 (241)
T ss_dssp             CSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCT
T ss_pred             CCcccccCcccceeEEEcCCCeEEEEEEEEECCCCCCC
Confidence            34578999999999998778999999999999988653

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=5.6e-07  Score=58.49  Aligned_cols=42  Identities=38%  Similarity=0.742  Sum_probs=34.7

Q ss_pred             ccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          72 NKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        72 ~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      +.+.......|.+|+|+||++. .+++|+|+||+||+..|+..
T Consensus       183 ~~~~~~~~~~c~gdsG~pl~~~-~~~~~~l~Gi~S~~~~c~~~  224 (247)
T d1rjxb_         183 AGHLAGGTDSCQGDSGGPLVCF-EKDKYILQGVTSWGLGCARP  224 (247)
T ss_dssp             ESCSSSCCCBCCSCTTCEEEEE-CSSSEEEEEEECTTSCCBBT
T ss_pred             EeccCCCcccccCCccceEEEe-eCCEEEEEEEEEeCCCCCCC
Confidence            3445556778999999999998 56899999999999988753

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1e-06  Score=56.59  Aligned_cols=39  Identities=36%  Similarity=0.703  Sum_probs=33.0

Q ss_pred             hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          75 LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        75 ~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      .......|.+|+|+||++. .+++|+|+||+||+.+|+..
T Consensus       174 ~~~~~~~~~gdsGgpl~~~-~~~~~~L~Gv~s~g~~c~~~  212 (233)
T d2p3ub1         174 DTKQEDACQGDSGGPHVTR-FKDTYFVTGIVSWGEGCARK  212 (233)
T ss_dssp             SSSSCBCCTTTTTCEEEEE-ETTEEEEEEEEEECSSSSCT
T ss_pred             ccccCCCcCCCcccccEEe-cCCeEEEEEEEEECCCCCCC
Confidence            3445678899999999998 47799999999999998764

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.8e-06  Score=55.53  Aligned_cols=40  Identities=30%  Similarity=0.614  Sum_probs=33.4

Q ss_pred             chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          74 YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        74 ~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ......+.|.+|+|+||++. .+++|+|+||+||+..|+..
T Consensus       173 ~~~~~~~~~~gdsGgpl~~~-~~~~~~l~Gi~s~g~~~~~~  212 (235)
T d1rfna_         173 FHEGGRDSCQGDSGGPHVTE-VEGTSFLTGIISWGEECAMK  212 (235)
T ss_dssp             CSSCSCBCCTTCTTCEEEEE-SSSCEEEEEEEEEESSSSCT
T ss_pred             cCCCCccccCCCCCceeEEe-cCCeEEEEEEEEeCCCCCCC
Confidence            34445688999999999998 57789999999999988763

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.3e-06  Score=56.76  Aligned_cols=36  Identities=47%  Similarity=0.950  Sum_probs=31.2

Q ss_pred             HHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          78 IYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      -...|.+|+|+||++. .+++|+|+||+||+..|+..
T Consensus       184 ~~~~~~gdsGgPl~~~-~~~~~~lvGi~S~g~~c~~~  219 (254)
T d2bz6h1         184 SKDSCKGDSGGPHATH-YRGTWYLTGIVSWGQGCATV  219 (254)
T ss_dssp             SCBCCGGGTTCEEEEE-ETTEEEEEEEEEECSSSSCT
T ss_pred             CcccccCccccceEEc-cCCeEEEEEEEEeCCCCCCC
Confidence            3578899999999998 46899999999999988753

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

Probab=98.00  E-value=1.7e-06  Score=56.05  Aligned_cols=39  Identities=38%  Similarity=0.683  Sum_probs=33.0

Q ss_pred             hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          75 LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        75 ~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      .......|.+|+|+||++. .+++|+|+||+|||.+|+..
T Consensus       178 ~~~~~~~~~gdsG~Pl~~~-~~~~~~L~Gi~S~g~~c~~~  216 (237)
T d2f91a1         178 PEGGKDSCQGDSGGPLAAS-DTGSTYLAGIVSWGYGCARP  216 (237)
T ss_dssp             TTCCCBCCTTCTTCEEEEC-TTSSCEEEEEEEEESSSSCT
T ss_pred             CCCccccccCCCCCeEEEe-cCCeEEEEEEEEeCCCCCCC
Confidence            3444678999999999998 57899999999999988764

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.5e-06  Score=55.90  Aligned_cols=36  Identities=39%  Similarity=0.843  Sum_probs=30.8

Q ss_pred             HhhccCCCCCceeeccC--CCcEEEEEeeeeCcccccc
Q psy7307          79 YNTAKGDSGGPLLLQRP--DKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~--~~~~~l~Gi~s~~~~C~~~  114 (117)
                      .+.|.+|+|+||++...  .++|+|+||+||+.+|+.+
T Consensus       201 ~~~c~gDsGgPl~~~~~~~~~~~~l~Gi~S~~~~c~~p  238 (259)
T d1elva1         201 MDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGTY  238 (259)
T ss_dssp             CBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTTSE
T ss_pred             CccCCCCcCCeEEEEecCCCcEEEEEEEEEeCCCCCCc
Confidence            57899999999998753  4689999999999999753

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2.1e-06  Score=55.46  Aligned_cols=39  Identities=38%  Similarity=0.863  Sum_probs=32.7

Q ss_pred             hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          75 LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        75 ~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      .......|.+|+|+||++.. +++|+|+||+|||..|+..
T Consensus       180 ~~~~~~~~~gd~G~pl~~~~-~~~~~l~Gi~s~g~~c~~~  218 (240)
T d1autc_         180 LGDRQDACEGDSGGPMVASF-HGTWFLVGLVSWGEGCGLL  218 (240)
T ss_dssp             TTCCCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCT
T ss_pred             ccccCCCcCCccCceeEEcC-CCCEEEEEEEEeCCCCCCC
Confidence            34456789999999999984 6899999999999988653

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

Probab=97.97  E-value=5.9e-07  Score=57.72  Aligned_cols=64  Identities=30%  Similarity=0.450  Sum_probs=42.7

Q ss_pred             CcEEEEEEeecCCCCCC-C-Ccee---eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-T-PGVY---VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVL  115 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~-p~~~---t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~~  115 (117)
                      .+...+.+++.. .|.+ + ....   ..++.+.....+.|.+|+|+||++.    .|+|+||+|||.+|+.+.
T Consensus       137 l~~~~v~~i~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~~c~~dsG~pl~~~----~~~l~GI~S~g~~c~~~~  205 (224)
T d1gdna_         137 LLKVTVPIVSRA-TCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGGPIVDS----SNTLIGAVSWGNGCARPN  205 (224)
T ss_dssp             CEEEEEEEECHH-HHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEECT----TCCEEEEEEECSSSSCTT
T ss_pred             eeeeEEEEeCHH-HHhcccccCccccceeeeecCCCCccccccccCCceEec----CCEEEEEEEeCCCCCCCC
Confidence            345667777766 6754 1 1111   1223344555678999999999964    358999999999987643

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=1.3e-06  Score=56.49  Aligned_cols=40  Identities=45%  Similarity=0.915  Sum_probs=33.4

Q ss_pred             chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          74 YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        74 ~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ........|.+|+|+||++. .+++|+|+||+||+.+|+..
T Consensus       176 ~~~~~~~~c~gdsG~pl~~~-~~~~~~l~Gi~s~g~~~~~~  215 (237)
T d1xx9a_         176 YREGGKDACKGDSGGPLSCK-HNEVWHLVGITSWGEGCAQR  215 (237)
T ss_dssp             CTTCCCBCCTTCTTCEEEEE-ETTEEEEEEEEEEESSSSCT
T ss_pred             cCCCCcccccCCccceeEEe-cCCEEEEEEEEEeCCCCCCC
Confidence            34555678999999999998 47899999999999987653

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=3.4e-06  Score=54.57  Aligned_cols=66  Identities=23%  Similarity=0.372  Sum_probs=43.6

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee----eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY----VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~----t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      .+...+.+++.. .|.. +...+    ..+|. ......+.|.+|+|+||++. .+++|+|+||+||+..|+..
T Consensus       135 l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsG~pl~~~-~~~~~~l~Gi~s~g~~c~~~  206 (234)
T d1si5h_         135 LRVAHLYIMGNE-KCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCE-QHKMRMVLGVIVPGRGCAIP  206 (234)
T ss_dssp             CEEEEEEEECGG-GTCC-------CCTTEEEEECSSSCCBCCTTCTTCEEEEE-CSSSEEEEEEECSCSCSSCT
T ss_pred             eEEEEeeccchh-HhhhhhccccccCCccEEEccCCcCCCCCcCccccceEEe-cCCeEEEEEEEEeCCCCCCC
Confidence            345566666665 5554 21111    12332 22334688999999999987 57899999999999998753

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.94  E-value=2.6e-06  Score=54.88  Aligned_cols=36  Identities=42%  Similarity=0.864  Sum_probs=30.8

Q ss_pred             HHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          78 IYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ..+.|.+|+|+||++.+ +++|+|+||+|||..|+..
T Consensus       179 ~~~~c~gdsG~pl~~~~-~~~~~l~Gi~S~g~~~~~~  214 (235)
T d1ekbb_         179 GVDSCQGDSGGPLMCQE-NNRWLLAGVTSFGYQCALP  214 (235)
T ss_dssp             CCBCCTTCTTCEEEEEE-TTEEEEEEEEEECSSSSCT
T ss_pred             CcccccCCCCCccEEcc-CCEEEEEEEEEecCCCCCC
Confidence            34679999999999984 6799999999999988653

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=97.92  E-value=5.3e-06  Score=53.24  Aligned_cols=61  Identities=25%  Similarity=0.246  Sum_probs=43.3

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ++...+.+++.. .|.+ +....  ..+.....+....|.+|+|+||++..     +|+||+|||..|..
T Consensus       141 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~~~~~~c~~d~G~Pl~~~~-----~l~Gi~S~g~~~~~  204 (224)
T d3rp2a_         141 LREVELRIMDEK-ACVDYRYYEYKFQVCVGSPTTLRAAFMGDSGGPLLCAG-----VAHGIVSYGHPDAK  204 (224)
T ss_dssp             CEEEEEEEECGG-GTTTTTCCCTTTEEEECCTTSCCBCCTTTTTCEEEETT-----EEEEEEEECCTTCC
T ss_pred             eeEEEEEccCHH-HhhhcccccccceeeeccCcccccCcCCCcCCeEEEcC-----EEEEEEEECCCCCC
Confidence            566777788777 7886 32211  12223345667889999999999964     99999999987654

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=6.8e-07  Score=57.41  Aligned_cols=61  Identities=26%  Similarity=0.220  Sum_probs=40.6

Q ss_pred             cEEEEEEeecCCCCCC-CCcee---eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          48 QWTIIGVVSWGIGCGK-TPGVY---VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        48 ~~~~vgI~s~~~~C~~-~p~~~---t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      +...+.+++.. .|.+ +....   ..++.......+.|.+|+|+||++..     +|+||+|||..|+..
T Consensus       140 ~~~~~~~~~~~-~C~~~~~~~~~~~~~c~~~~~~~~~~c~gdsGgPl~~~~-----~l~Gi~S~g~~~~~~  204 (224)
T d1t32a1         140 REVQLRVQRDR-QCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNN-----VAHGIVSYGKSSGVP  204 (224)
T ss_dssp             EEEEEEBCCHH-HHHHHSTTCCTTTEEEECCTTSSCBCCTTCTTCEEEETT-----EEEEEEEECCTTCCS
T ss_pred             eeeeeeecCHH-HHHhhcCcccccccceeecccccccccccCcCCeEEEcC-----EEEEEEEEcCCCCCC
Confidence            44455555554 6655 32211   11233345567889999999999965     899999999887753

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.85  E-value=3.7e-06  Score=54.80  Aligned_cols=42  Identities=40%  Similarity=0.691  Sum_probs=33.0

Q ss_pred             cccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--cccc
Q psy7307          71 VNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQ  113 (117)
Q Consensus        71 v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~  113 (117)
                      ++.......+.|.+|+|+||++. .+++|+|+||+||+.  .|+.
T Consensus       185 ~c~~~~~~~~~c~gd~G~Pl~~~-~~~~~~L~Gi~S~~~~~~c~~  228 (251)
T d1pytd_         185 VCAGGDGVISACNGDSGGPLNCQ-ADGQWDVRGIVSFGSGLSCNT  228 (251)
T ss_dssp             EEECCSCSSCCCCSCTTCEEEEE-SSSSEEEEEEEEECCSSCTTB
T ss_pred             EEeccCCCCccccCCCCCceEEe-eCCEEEEEEEEEECCCCCCCC
Confidence            44433445688999999999998 578999999999986  4664

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

Probab=97.85  E-value=1.1e-06  Score=56.42  Aligned_cols=61  Identities=38%  Similarity=0.733  Sum_probs=39.5

Q ss_pred             cEEEEEEeecCCCCCC-CCceee--ecc-cchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          48 QWTIIGVVSWGIGCGK-TPGVYV--QVN-KYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        48 ~~~~vgI~s~~~~C~~-~p~~~t--~v~-~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++..+.+++.. .|.+ ++...+  .+| .+.+...+.|.+|+|+||++..     +|+||+||+.+|+..
T Consensus       135 ~~~~~~~~~~~-~C~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgPl~~~~-----~l~Gi~S~g~~~~~~  199 (222)
T d1hj8a_         135 QCLNIPILSYS-DCNNSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCNG-----ELQGVVSWGYGCAEP  199 (222)
T ss_dssp             EEEEEEBCCHH-HHHHHSTTCCCTTEEEESCTTSSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSCT
T ss_pred             EEEEEEEeCHH-HHhhhcccccccceEEEccCCCCcccccCCcccEEEECC-----EEEEEEEEecCCCCC
Confidence            44455555544 5654 322221  122 2334446789999999999974     899999999988753

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.84  E-value=6.8e-06  Score=52.87  Aligned_cols=39  Identities=36%  Similarity=0.653  Sum_probs=32.6

Q ss_pred             HHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--ccccc
Q psy7307          76 RWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQV  114 (117)
Q Consensus        76 ~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~~  114 (117)
                      .+....|.+|+|+||++...+++|+|+||+||+.  +|+..
T Consensus       169 ~~~~~~~~gdsGgpl~~~~~~~~~~L~Gi~s~~~~~~c~~~  209 (232)
T d1fona_         169 GDTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTI  209 (232)
T ss_dssp             CSSSCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSBT
T ss_pred             cccccccccCCCCceEEEccCCCEEEEEEEEEcCCCCCCCC
Confidence            3446789999999999987788999999999975  48754

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=5.1e-06  Score=53.84  Aligned_cols=35  Identities=51%  Similarity=1.033  Sum_probs=30.5

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ...|.+|+|+||++. .+++|+|+||+||+..|+..
T Consensus       187 ~~~~~gdsGgpl~~~-~~~~~~L~Gi~s~~~~~~~~  221 (243)
T d2fpza1         187 RDSCQGDSGGPLVCK-VNGTWLQAGVVSWGEGCAQP  221 (243)
T ss_dssp             SBCCTTCTTCEEEEE-ETTEEEEEEEEEECSSSSBT
T ss_pred             CCCccCCCCCeEEEe-eCCEEEEEEEEEECCCCCCC
Confidence            567999999999987 47899999999999988753

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.82  E-value=3.1e-06  Score=54.47  Aligned_cols=42  Identities=33%  Similarity=0.472  Sum_probs=32.7

Q ss_pred             cccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--cccc
Q psy7307          71 VNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQ  113 (117)
Q Consensus        71 v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~  113 (117)
                      ++.........|.+|+|+||++.. +++|+|+||+||+.  +|+.
T Consensus       173 ~c~~~~~~~~~c~gDsG~pl~~~~-~~~~~lvGI~S~~~~~~c~~  216 (240)
T d1gvkb_         173 VCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNV  216 (240)
T ss_dssp             EEECCSSSCBCCTTCTTCEEEEEE-TTEEEEEEEEEECBTTBSSC
T ss_pred             EEecCCCCCccccCccccceEEEE-CCEEEEEEEEEEcCCCCCCC
Confidence            444444456789999999999984 67999999999986  4654

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=3.4e-06  Score=54.54  Aligned_cols=39  Identities=28%  Similarity=0.462  Sum_probs=31.6

Q ss_pred             cccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          71 VNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        71 v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ++.......+.|.+|+|+||++..     +|+||+|||.+|+..
T Consensus       175 c~~~~~~~~~~C~gDsGgPl~~~~-----~l~Gi~S~g~~c~~~  213 (240)
T d1mzaa_         175 CAGDAKGQKDSCKGDAGGPLICKG-----VFHAIVSGGHECGVA  213 (240)
T ss_dssp             EEECTTSCCCCCTTCTTCEEEETT-----EEEEEECSSCCSSCT
T ss_pred             EeccCCCCccCccCCCCCeEEECC-----EEEEEEEeCCCCCCC
Confidence            344455557889999999999864     899999999999764

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

Probab=97.79  E-value=1.5e-06  Score=55.92  Aligned_cols=61  Identities=38%  Similarity=0.599  Sum_probs=42.0

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee---eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY---VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~---t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      .++..+.+++.. .|.+ ++...   ..++.........|.+|+|+||++..     +|+||+||+..|..
T Consensus       139 l~~~~~~~~~~~-~C~~~~~~~~~~~~~c~~~~~~~~~~~~gd~G~Pl~~~~-----~l~Gi~s~g~~~~~  203 (228)
T d1fxya_         139 LQCLDAPVLSQA-KCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNG-----QLQGVVSWGDGCAQ  203 (228)
T ss_dssp             CEEEEEEBCCHH-HHHHHSTTTCCTTEEEESCTTCSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSB
T ss_pred             hEEEEEEEeCHH-HHhhhcCCcccceeeEeecCCCCcccccCccCccEEEeC-----EEEEEEEECCCCCC
Confidence            455666666655 6765 33221   12334445557889999999999974     89999999998864

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1.2e-05  Score=52.11  Aligned_cols=36  Identities=42%  Similarity=1.033  Sum_probs=30.5

Q ss_pred             HhhccCCCCCceeeccC-CCcEEEEEeeeeCcccccc
Q psy7307          79 YNTAKGDSGGPLLLQRP-DKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~-~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ...+.+|+|+||++.+. ..+|+|+||+||+.+|+..
T Consensus       184 ~~~~~gdsG~pl~~~~~~~~~~~l~Gi~S~g~~c~~~  220 (240)
T d2qy0b1         184 QDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRG  220 (240)
T ss_dssp             CBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSSS
T ss_pred             ceeeccccccceEEEeCCCCeEEEEEEEEECCCCCCC
Confidence            46788999999999865 4679999999999999754

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1.3e-05  Score=51.31  Aligned_cols=61  Identities=30%  Similarity=0.316  Sum_probs=38.6

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee-eec-ccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY-VQV-NKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~-t~v-~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      .++..+.+++.. .|.+ +.... ..+ +.........|.+|+|+||++..     +|+||+||+..|..
T Consensus       139 ~~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~~~~~~c~gDsG~PL~~~~-----~l~GI~s~g~~~~~  202 (224)
T d1nn6a_         139 LQEVKLRLMDPQ-ACSHFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAG-----VAQGIVSYGRSDAK  202 (224)
T ss_dssp             CEEEEEEBCCGG-GGTTSTTCCTTTEEEECCTTTC--CCCCCTTCEEEETT-----EEEEEEEECCTTCC
T ss_pred             ceEEEEEecCHH-HHhhhcccccceeeeccCccccccccCCCccceEEECC-----EEEEEEEECCCCCC
Confidence            455566666666 7876 22111 112 22233346789999999999964     89999999987654

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1e-05  Score=52.27  Aligned_cols=40  Identities=33%  Similarity=0.729  Sum_probs=32.4

Q ss_pred             hHHHHhhccCCCCCceeecc-CCCcEEEEEeeeeCc-ccccc
Q psy7307          75 LRWIYNTAKGDSGGPLLLQR-PDKQWTIIGVVSWGI-GCAQV  114 (117)
Q Consensus        75 ~~wi~~~~~gdsg~pl~~~~-~~~~~~l~Gi~s~~~-~C~~~  114 (117)
                      .......|.+|+|+||++.. ..++|+|+||+|||. .|+..
T Consensus       178 ~~~~~~~c~gdsGgpl~~~~~~~~~~~l~Gi~S~g~~~c~~~  219 (242)
T d1q3xa1         178 ESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEA  219 (242)
T ss_dssp             SSCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEECCSSTTCT
T ss_pred             cCCCccccccccccceEEeeCCCCeEEEEEEEEeCCCCCCCC
Confidence            34456789999999999875 457899999999986 68754

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=97.72  E-value=6.8e-06  Score=52.85  Aligned_cols=61  Identities=28%  Similarity=0.344  Sum_probs=40.7

Q ss_pred             CcEEEEEEeecCCCCCC-CCceee--ecc-cchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc-cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVYV--QVN-KYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~t--~v~-~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~  113 (117)
                      .+...+.+++.. .|.. +....+  .++ ....-.++.|.+|+|+||++..     +|+||+||+. .|+.
T Consensus       145 l~~~~~~~~~~~-~C~~~~~~~~~~~~~c~~~~~~~~~~c~gdsG~Pl~~~~-----~l~Gi~S~g~~~c~~  210 (235)
T d1tona_         145 LQCVNIHLLSNE-KCIETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLICDG-----VLQGITSGGATPCAK  210 (235)
T ss_dssp             CEEEEEEEECGG-GCGGGGSTTGGGGEEEEECTTCSCBCCTTCTTCEEEETT-----EEEEEECCCCSSCSC
T ss_pred             ceeeeeeeeCHH-HHHHHhCCCCCCCceEeCcCCCCccccCCCcCCeEEEcC-----EEEEEEEeCCCCCCC
Confidence            445566677666 7876 332221  122 2333346789999999999964     9999999996 5764

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

Probab=97.71  E-value=3.3e-06  Score=53.85  Aligned_cols=40  Identities=35%  Similarity=0.518  Sum_probs=31.7

Q ss_pred             ccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccccC
Q psy7307          72 NKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQVLK  116 (117)
Q Consensus        72 ~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~~~  116 (117)
                      +...+...+.|.+|+|+||++..     +|+||+||+..|+...+
T Consensus       164 c~~~~~~~~~c~~d~G~pl~~~~-----~L~GI~s~~~~c~~~~p  203 (222)
T d1eq9a_         164 CTLTKRGEGACHGDSGGPLVANG-----AQIGIVSFGSPCALGEP  203 (222)
T ss_dssp             EECCCTTCBCCTTCTTCEEEETT-----EEEEEEEECSTTTSSSC
T ss_pred             EeccCCCCCccccCCcCCEEEcC-----EEEEEEEECCCCCCCCC
Confidence            33344456789999999999864     89999999999986554

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

Probab=97.70  E-value=1.4e-05  Score=49.53  Aligned_cols=47  Identities=28%  Similarity=0.402  Sum_probs=36.4

Q ss_pred             CCCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC--CCceeeecccchHH
Q psy7307          26 RTSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK--TPGVYVQVNKYLRW   77 (117)
Q Consensus        26 ~~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~--~p~~~t~v~~~~~w   77 (117)
                      ......|.||||+||+..   .  .++||++++..|..  .+.+|+++..++++
T Consensus       133 ~~~~~~~~GDSGgPl~~~---~--~~vGi~s~g~~~~~~~~~~~~~pv~~~l~~  181 (187)
T d1hpga_         133 RTTACSAGGDSGGAHFAG---S--VALGIHSGSSGCSGTAGSAIHQPVTEALSA  181 (187)
T ss_dssp             EECCCCCTTCTTCEEEET---T--EEEEEEEEESCCBTTBCCCEEEEHHHHHHH
T ss_pred             EcCcccccCCCCCeEEEC---C--EEEEEEEEEecCCCCCCCEEEEEHHHHHHH
Confidence            346778999999999975   3  38999999866554  67889998776554

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

Probab=97.64  E-value=3.1e-06  Score=53.85  Aligned_cols=50  Identities=22%  Similarity=0.366  Sum_probs=38.9

Q ss_pred             CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCC---CCceeeecccchHHHHh
Q psy7307          27 TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGK---TPGVYVQVNKYLRWIYN   80 (117)
Q Consensus        27 ~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~---~p~~~t~v~~~~~wi~~   80 (117)
                      ...+.|.||||+||+..    .+.++||.+++..|..   -+.+|+++..|.+||++
T Consensus       162 ~~~~~~~G~SGgPl~~~----~~~lvGi~s~g~~~~~~~~~~~i~~~v~~~i~wi~~  214 (215)
T d1p3ca_         162 YTIDTFSGNSGSAMLDQ----NQQIVGVHNAGYSNGTINGGPKATAAFVEFINYAKA  214 (215)
T ss_dssp             ECCCCCTTCTTCEEECT----TSCEEEECCEEEGGGTEEEEEBCCHHHHHHHHHHHT
T ss_pred             eecccCCCCccCeEECC----CCEEEEEEEeccCCCCCCCCeEEEeEHHHHHHHHHc
Confidence            35678999999999943    2359999998755554   35677888999999985

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

Probab=97.64  E-value=1.8e-05  Score=49.04  Aligned_cols=31  Identities=32%  Similarity=0.519  Sum_probs=26.0

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ..++.||||+||+..+     .++||+||+.+|+..
T Consensus       136 ~~~~~GDSGgPl~~~~-----~~vGi~s~g~~~~~~  166 (187)
T d1hpga_         136 ACSAGGDSGGAHFAGS-----VALGIHSGSSGCSGT  166 (187)
T ss_dssp             CCCCTTCTTCEEEETT-----EEEEEEEEESCCBTT
T ss_pred             cccccCCCCCeEEECC-----EEEEEEEEEecCCCC
Confidence            4678999999999864     799999999886654

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.58  E-value=5.5e-06  Score=53.09  Aligned_cols=61  Identities=30%  Similarity=0.505  Sum_probs=39.6

Q ss_pred             cEEEEEEeecCCCCCC-CCcee--eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcc-cccc
Q psy7307          48 QWTIIGVVSWGIGCGK-TPGVY--VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG-CAQV  114 (117)
Q Consensus        48 ~~~~vgI~s~~~~C~~-~p~~~--t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~~~  114 (117)
                      +...+.+++.. .|.+ ++...  ..+|.......+.|.+|+|+||++..     +|+||+|||.. |+..
T Consensus       140 ~~~~~~~~~~~-~C~~~~~~~~~~~~~C~~~~~~~~~c~gd~G~pl~~~~-----~l~Gi~S~g~~~c~~~  204 (225)
T d1npma_         140 NCAEVKIYSQN-KCERAYPGKITEGMVCAGSSNGADTCQGDSGGPLVCDG-----MLQGITSWGSDPCGKP  204 (225)
T ss_dssp             EEEEEEECCHH-HHHHHSTTTCCTTEEEEECTTCCBCCTTCTTCEEEETT-----EEEEEEEECCSSSCBT
T ss_pred             EEEEEEEecHH-HHhhhccCCcCCCEEEecCCCCCccccCCCCceEEEcc-----EEEEEEEECCCCCCCC
Confidence            44455555555 5754 32211  12444334456789999999999964     99999999964 7653

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=1.2e-05  Score=51.39  Aligned_cols=35  Identities=37%  Similarity=0.775  Sum_probs=28.4

Q ss_pred             hHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc-ccccc
Q psy7307          75 LRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQV  114 (117)
Q Consensus        75 ~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~~  114 (117)
                      .......|.+|+|+||++.+     +|+||+|||. +|...
T Consensus       165 ~~~~~~~c~gd~G~Pl~~~~-----~l~Gi~S~g~~~c~~~  200 (221)
T d1lo6a_         165 EKYGKDSCQGDSGGPLVCGD-----HLRGLVSWGNIPCGSK  200 (221)
T ss_dssp             TTTCCBCCTTTTTCEEEETT-----EEEEEEEECCSSCCCS
T ss_pred             cccCCCCccCCCCCcEEECC-----EEEEEEEEccCCCCCC
Confidence            34456789999999999975     8999999997 57653

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.55  E-value=1.1e-05  Score=51.60  Aligned_cols=62  Identities=29%  Similarity=0.505  Sum_probs=42.2

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee--eecc-cchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY--VQVN-KYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~--t~v~-~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      .++..+.+++.. .|.. +....  ..+| .+.......|.+|+|+||++..     +|+||+||+..|+..
T Consensus       135 l~~~~~~~~~~~-~C~~~~~~~~~~~~~C~~~~~~~~~~c~gd~g~pl~~~~-----~L~Gi~s~~~~~~~~  200 (223)
T d1j16a_         135 LQCLDAPLLPQA-DCEASSSFIITDNMVCVGFLEGGKDACQGDSGGPVVCNG-----ELQGIVSWGYGCALP  200 (223)
T ss_dssp             CEEEEEEEECHH-HHHSSSSCCCCTTEEEESCTTCSCBCCTTCTTCEEEETT-----EEEEEEEECSSSSCT
T ss_pred             eeEEEEEEEEhh-HhhccccceeCCCceEEecCCCCCcccCCccCCcEEEee-----EEEEEEEEccCCCCC
Confidence            455566777766 6765 22111  1222 3444446789999999999974     899999999988764

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

Probab=97.55  E-value=2.5e-05  Score=49.94  Aligned_cols=36  Identities=36%  Similarity=0.603  Sum_probs=30.0

Q ss_pred             HHhhccCCCCCceeeccCCCcEEEEEeeeeCc--ccccc
Q psy7307          78 IYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQV  114 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~~  114 (117)
                      ....|.+|+|+||++.. +++|+|+||+||+.  +|+..
T Consensus       179 ~~~~c~gdsGgpl~~~~-~~~~~l~GI~s~~~~~~c~~~  216 (236)
T d1elta_         179 ANSGCNGDSGGPLNCQV-NGSYYVHGVTSFVSSSGCNAS  216 (236)
T ss_dssp             SCBCCTTCTTCEEEEEE-TTEEEEEEEEEECCSSCTTCT
T ss_pred             cccccccccccceEEEE-CCeEEEEEEEEEeCCCCCCCC
Confidence            45789999999999984 67899999999975  57654

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

Probab=97.53  E-value=4.3e-06  Score=53.70  Aligned_cols=32  Identities=34%  Similarity=0.507  Sum_probs=26.8

Q ss_pred             HHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccc
Q psy7307          76 RWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCA  112 (117)
Q Consensus        76 ~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~  112 (117)
                      ...++.|.+|+|+||++..     +|+||+||+..|+
T Consensus       168 ~~~~~~c~gdsG~Pl~~~~-----~l~Gi~S~g~~~~  199 (226)
T d1azza_         168 TGGKGTCNGDSGGPLNYNG-----LTYGITSFGAAAG  199 (226)
T ss_dssp             TTTCBCCTTCTTCEEEETT-----EEEEEEEEEETTC
T ss_pred             cCCCccccCCcCCCEEEcC-----EEEEEEEEeCCCC
Confidence            4457889999999999864     8999999998654

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.49  E-value=1.6e-05  Score=50.82  Aligned_cols=60  Identities=27%  Similarity=0.211  Sum_probs=38.7

Q ss_pred             cEEEEEEeecCCCCCC-CCce---eeecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          48 QWTIIGVVSWGIGCGK-TPGV---YVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        48 ~~~~vgI~s~~~~C~~-~p~~---~t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      +...+.+++.. .|.. ....   ....+.........|.+|+|+||++..     +|+||+|||.+|..
T Consensus       141 ~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~c~~dsGgpl~~~~-----~l~Gi~s~g~~~~~  204 (224)
T d1eufa_         141 QEVDLEVQSEE-KCIARFKNYIPFTQICAGDPSKRKNSFSGDSGGPLVCNG-----VAQGIVSYGRNDGT  204 (224)
T ss_dssp             EEEEEEBCCTH-HHHTTCTTCCTTTEEEESCTTSCCBCCTTCTTCEEEETT-----EEEEEEEECCTTCC
T ss_pred             eeeeeccCCHH-HHHHHhccccccceeeeeccccccccccCCCCCeEEEcC-----EEEEEEEEcCCCCC
Confidence            34455555544 5654 2111   112233334456789999999999974     89999999988864

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

Probab=97.39  E-value=2.6e-05  Score=51.28  Aligned_cols=35  Identities=20%  Similarity=0.238  Sum_probs=23.8

Q ss_pred             HHhhccCCCCCceeeccCCCcEEEEEeeeeC----cccccccC
Q psy7307          78 IYNTAKGDSGGPLLLQRPDKQWTIIGVVSWG----IGCAQVLK  116 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~----~~C~~~~~  116 (117)
                      -.+.|.||||+||++.+.    .++||+|||    .+|+...|
T Consensus       186 ~~~~c~GDSGGPL~~~~g----~~vGvvsgg~s~c~~c~~~~p  224 (263)
T d1arba_         186 GGVTEPGSSGSPIYSPEK----RVLGQLHGGPSSCSATGTNRS  224 (263)
T ss_dssp             SCCCCTTCTTCEEECTTS----CEEEEEEECSCCTTCCGGGSE
T ss_pred             CccccCCCCcceEEecCC----CEEEEEEEEEeCCcCCCCCCC
Confidence            356899999999998643    356666665    35665443

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=5.2e-05  Score=47.93  Aligned_cols=33  Identities=39%  Similarity=0.580  Sum_probs=27.1

Q ss_pred             HHhhccCCCCCceeeccCCCcEEEEEeeeeCc-cccccc
Q psy7307          78 IYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQVL  115 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~~~  115 (117)
                      ..+.|.+|+|+||+++.     +|.||+||+. +|+...
T Consensus       165 ~~~~C~gdsG~Pl~~~~-----~l~GI~s~~~~~c~~~~  198 (218)
T d2z7fe1         165 QAGVCFGDSGSPLVCNG-----LIHGIASFVRGGCASGL  198 (218)
T ss_dssp             CCBCCTTCTTCEEEETT-----EEEEEEEEESSSTTCSS
T ss_pred             ccCccccccCCCEEECC-----EEEEEEEEecCCCCCCC
Confidence            35689999999999974     8999999985 687543

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.38  E-value=4.5e-05  Score=48.67  Aligned_cols=31  Identities=35%  Similarity=0.655  Sum_probs=26.5

Q ss_pred             HHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          78 IYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      ....|++|+|+||++..     +|+||+|||..|+.
T Consensus       176 ~~~~c~gdsGgPl~~~~-----~l~Gi~S~g~~~~~  206 (227)
T d1fi8a_         176 KRASFRGDSGGPLVCKK-----VAAGIVSYGQNDGS  206 (227)
T ss_dssp             CCBCCTTCTTSEEEETT-----EEEEEEEEEETTCC
T ss_pred             cCCCcCCCcCCEEEECC-----EEEEEEEEcCCCCC
Confidence            36779999999999964     99999999987763

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.30  E-value=6.2e-05  Score=48.25  Aligned_cols=38  Identities=29%  Similarity=0.486  Sum_probs=29.6

Q ss_pred             ccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc-ccccc
Q psy7307          72 NKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQV  114 (117)
Q Consensus        72 ~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~~  114 (117)
                      +.........|.+|+|+||++..     +|+||+|||. .|+..
T Consensus       175 ~~~~~~~~~~c~gdsG~pl~~~~-----~l~Gi~S~g~~~c~~~  213 (237)
T d1ao5a_         175 AGEMGGGKDTCRDDSGGPLICDG-----ILQGTTSYGPVPCGKP  213 (237)
T ss_dssp             EECTTCSCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCT
T ss_pred             EccCCCCCcccCCCCCCeeEEcc-----EEEEEEEEecCCCCCC
Confidence            33444456789999999999864     9999999996 57653

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.28  E-value=8.5e-05  Score=47.07  Aligned_cols=34  Identities=38%  Similarity=0.813  Sum_probs=28.2

Q ss_pred             HHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcccccc
Q psy7307          76 RWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQV  114 (117)
Q Consensus        76 ~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~~  114 (117)
                      ....+.|.+|+|+||++..     +|+||+||+..|...
T Consensus       167 ~~~~~~~~gd~g~pl~~~~-----~L~Gi~S~g~~c~~~  200 (223)
T d1hj9a_         167 EGKGDSCQGDSGGPVVCSG-----KLQGIVSWGSGCQAK  200 (223)
T ss_dssp             CCCCCCCTTCTTCEEEETT-----EEEEEEEECSCCCCC
T ss_pred             CCCcccccCCCCceeEEeC-----EEEEEEEEcCCCCCC
Confidence            3345789999999999974     899999999988653

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=2.8e-05  Score=49.62  Aligned_cols=61  Identities=25%  Similarity=0.388  Sum_probs=39.4

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee---eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc-cccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY---VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~---t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~  113 (117)
                      .++..+.+++.. .|.+ .....   ..++.........|.+|+|+||++..     +|+||+|||. +|+.
T Consensus       138 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~pl~~~~-----~l~Gv~S~g~~~c~~  203 (228)
T d1sgfa_         138 LQCVNLKLLPNE-DCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDG-----ILQGITSWGPEPCGE  203 (228)
T ss_dssp             --CEEEEEECTH-HHHTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEETT-----EEEEEECCCCSSCCC
T ss_pred             cEEEEEEEeCHH-HhhhhccCCcccceEEeccCCCCccccCCCcCCcEEEeC-----EEEEEEEECCCCCCC
Confidence            345566677665 6765 22111   12333333345789999999999975     9999999986 6764

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.21  E-value=6e-05  Score=48.18  Aligned_cols=59  Identities=25%  Similarity=0.404  Sum_probs=38.6

Q ss_pred             EEEEEEeecCCCCCC-CCceee---ecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc-cccc
Q psy7307          49 WTIIGVVSWGIGCGK-TPGVYV---QVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQ  113 (117)
Q Consensus        49 ~~~vgI~s~~~~C~~-~p~~~t---~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~  113 (117)
                      ...+.+++.. .|.+ ++....   .++....-....|.+|+|+||+++.     +|+||+||+. .|+.
T Consensus       149 ~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~~~gdsG~pl~~~~-----~l~Gv~s~g~~~c~~  212 (237)
T d1gvza_         149 CVELRLQSNE-KCARAYPEKMTEFVLCATHRDDSGSICLGDSGGALICDG-----VFQGITSWGYSECAD  212 (237)
T ss_dssp             EEEEEEECGG-GGCSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEEETT-----EEEEEECCCSSSCEE
T ss_pred             EEEEEeecHH-HHHhhcccccccccccceecccccccccCCCCCcEEEcC-----EEEEEEEeccCCCCC
Confidence            3444455555 6876 332221   1233334456789999999999975     9999999997 4654

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.0001  Score=46.58  Aligned_cols=36  Identities=36%  Similarity=0.509  Sum_probs=28.7

Q ss_pred             chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc-ccccc
Q psy7307          74 YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQV  114 (117)
Q Consensus        74 ~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~~  114 (117)
                      ......+.|.+|+|+||++..     +|+||+||+. .|+..
T Consensus       171 ~~~~~~~~~~gdsG~Pl~~~~-----~LvGi~S~g~~~c~~~  207 (228)
T d1bioa_         171 AESNRRDSCKGDSGGPLVCGG-----VLEGVVTSGSRVCGNR  207 (228)
T ss_dssp             ECCSSCBCCTTTTTCEEEETT-----EEEEEECCSCCCSSCT
T ss_pred             ecccCCCcccCCcCccEEEcC-----EEEEEEEECCCCCCCC
Confidence            334456889999999999964     9999999986 58653

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=1e-05  Score=51.81  Aligned_cols=61  Identities=26%  Similarity=0.279  Sum_probs=39.8

Q ss_pred             CcEEEEEEeecCCCCCC-CCcee----eecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGVY----VQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~~----t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      .++..+.+++.. .|.+ +....    ...+.........|.+|+|+||++..     +|+||+|||..|+.
T Consensus       140 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsG~pl~~~~-----~l~GI~s~g~~~~~  205 (227)
T d1fq3a_         140 LQEVKMTVQEDR-KCESDLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNK-----VAQGIVSYGRNNGM  205 (227)
T ss_dssp             CCBCEEECCCHH-HHTTTCTTTCCTTTEECCSCTTSSCBCCTTCTTCBCBSSS-----SCCCEECCCCTTSC
T ss_pred             ceEEEEEEEcHH-HhhhhhcccccccceeeeeccccccccccCCCCceEEEeC-----EEEEEEEEcCCCCC
Confidence            344566666655 6765 22111    12233333346789999999999864     89999999998775

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00016  Score=45.80  Aligned_cols=30  Identities=33%  Similarity=0.644  Sum_probs=25.5

Q ss_pred             HHhhccCCCCCceeeccCCCcEEEEEeeeeCcc-cc
Q psy7307          78 IYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG-CA  112 (117)
Q Consensus        78 i~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~-C~  112 (117)
                      -.+.|.+|+|+||++..     +|+||+||+.+ |+
T Consensus       167 ~~~~c~gdsG~Pl~~~~-----~l~Gi~S~~~~~c~  197 (225)
T d1a7sa_         167 RGGICNGDGGTPLVCEG-----LAHGVASFSLGPCG  197 (225)
T ss_dssp             SCBCCTTCTTCEEEETT-----EEEEEEEEECSSTT
T ss_pred             ccccccCCCCCCEEEeC-----EEEEEEEECCCCCC
Confidence            35789999999999964     89999999985 54

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00017  Score=45.88  Aligned_cols=62  Identities=27%  Similarity=0.401  Sum_probs=40.0

Q ss_pred             CcEEEEEEeecCCCCCC-CC---ce-e--eeccc-chHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc--ccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TP---GV-Y--VQVNK-YLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI--GCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p---~~-~--t~v~~-~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~--~C~~~  114 (117)
                      ++...+.+++.. .|.+ ..   .. .  ..+|. ......+.|.+|+|+||++..     +|+||+|||.  +|+..
T Consensus       138 l~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsG~Pl~~~~-----~l~GI~S~g~~~~c~~~  209 (232)
T d1orfa_         138 LREVEITIIDRK-VCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEG-----VFRGVTSFGLENKCGDP  209 (232)
T ss_dssp             CEEEEEEEECHH-HHTSTTTTTTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEETT-----EEEEEEEECCTTCTTCT
T ss_pred             heEEEeecCCHH-HHhhhhhcccCccccCceEEeccCCCCcccccccCCCeEEEcC-----EEEEEEEEECCCCCCCC
Confidence            455666666665 6754 11   11 1  12333 333346789999999999974     8999999985  57653

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00022  Score=45.00  Aligned_cols=30  Identities=47%  Similarity=0.773  Sum_probs=26.3

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCc-cccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQ  113 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~  113 (117)
                      ...|.+|+|+||++..     +|+||+||+. +|+.
T Consensus       169 ~~~c~gd~G~pl~~~~-----~l~Gi~s~~~~gc~~  199 (221)
T d1fuja_         169 AGICFGDSGGPLICDG-----IIQGIDSFVIWGCAT  199 (221)
T ss_dssp             CBCCTTCTTCEEEETT-----EEEEEEEECSSSTTC
T ss_pred             CceeCCccCCCEEEeC-----EEEEEEEEEECCCCC
Confidence            6789999999999974     9999999986 7865

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

Probab=97.01  E-value=0.00011  Score=46.96  Aligned_cols=62  Identities=27%  Similarity=0.436  Sum_probs=39.8

Q ss_pred             CcEEEEEEeecCCCCCC-CCce----eeecccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc-ccccc
Q psy7307          47 KQWTIIGVVSWGIGCGK-TPGV----YVQVNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI-GCAQV  114 (117)
Q Consensus        47 ~~~~~vgI~s~~~~C~~-~p~~----~t~v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~-~C~~~  114 (117)
                      .+...+.+++.. .|.+ .+..    ...+........+.|.+|+|+||++..     +|+||+||+. .|+..
T Consensus       137 ~~~~~~~~~~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~Pl~~~~-----~l~Gi~S~g~~~c~~~  204 (234)
T d1op0a_         137 PYCANINLLDHA-VCQAGYPELLAEYRTLCAGIVQGGKDTCGGDSGGPLICNG-----QFQGIVSYGAHPCGQG  204 (234)
T ss_dssp             CEEEEEEEECHH-HHHHHCTTCCTTSCEEEEECTTCCCBCCTTCTTCEEEETT-----EEEEEEEECCSSTTCT
T ss_pred             cccccceEechH-HhcccccCcceeeeeeeecccccccccccCCCCceEEEcC-----EEEEEEEEcCCCCCCC
Confidence            344555566554 5654 2211    112233345567889999999999864     8999999986 57654

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

Probab=96.94  E-value=0.00014  Score=46.38  Aligned_cols=37  Identities=35%  Similarity=0.437  Sum_probs=29.3

Q ss_pred             cccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCcc
Q psy7307          71 VNKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG  110 (117)
Q Consensus        71 v~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~  110 (117)
                      ++.........|.+|+|+|+++.+   +|+|+||+||+.+
T Consensus       165 ~~~~~~~~~~~~~gdsGgp~~~~~---~~~l~Gi~S~~~~  201 (230)
T d2hlca_         165 ICGDTSDGKSPCFGDSGGPFVLSD---KNLLIGVVSFVSG  201 (230)
T ss_dssp             EEECCTTSCBCCTTCTTCEEEEGG---GTEEEEEEEECCT
T ss_pred             eEeccccCccccccccCCCeEECC---CeEEEEEEEEeCC
Confidence            344445557889999999999864   5799999999875

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

Probab=96.25  E-value=0.0012  Score=41.80  Aligned_cols=36  Identities=31%  Similarity=0.437  Sum_probs=27.8

Q ss_pred             ccchHHHHhhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          72 NKYLRWIYNTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        72 ~~~~~wi~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      +.........|.+|+|+||++..  +.|+|+||+||+.
T Consensus       177 ~~~~~~~~~~~~g~sGgpl~~~~--~~~~l~Gi~s~~~  212 (241)
T d1m9ua_         177 VQDPAGNTGACNGDSGGPLNCPD--GGTRVVGVTSWVV  212 (241)
T ss_dssp             ECCTTSCCBCCTTCTTCEEEEES--SSEEEEEEEEECC
T ss_pred             eecccCCcCcccCCCCcceEEec--CCEEEEEEEEEEE
Confidence            33445567889999999999863  4578999999864

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

Probab=96.17  E-value=0.00084  Score=42.05  Aligned_cols=31  Identities=32%  Similarity=0.442  Sum_probs=24.7

Q ss_pred             HhhccCCCCCceeeccCCCcEEEEEeeeeCccccc
Q psy7307          79 YNTAKGDSGGPLLLQRPDKQWTIIGVVSWGIGCAQ  113 (117)
Q Consensus        79 ~~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~~  113 (117)
                      .+++.||||+||+..    .+.|+||.|+|.+|+.
T Consensus       164 ~~~~~G~SGgPl~~~----~~~lvGi~s~g~~~~~  194 (215)
T d1p3ca_         164 IDTFSGNSGSAMLDQ----NQQIVGVHNAGYSNGT  194 (215)
T ss_dssp             CCCCTTCTTCEEECT----TSCEEEECCEEEGGGT
T ss_pred             cccCCCCccCeEECC----CCEEEEEEEeccCCCC
Confidence            367899999999954    2479999999987653

>d2sgaa_ b.47.1.1 (A:) Protease A {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease A
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=94.48  E-value=0.012  Score=36.07  Aligned_cols=26  Identities=42%  Similarity=0.655  Sum_probs=21.2

Q ss_pred             ccCCCCCceeeccCCCcEEEEEeeeeCcccc
Q psy7307          82 AKGDSGGPLLLQRPDKQWTIIGVVSWGIGCA  112 (117)
Q Consensus        82 ~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C~  112 (117)
                      ..||||+|+...+     .++||+|++.++.
T Consensus       133 ~~GdSGGPv~~~~-----~~vGi~sgg~~~~  158 (181)
T d2sgaa_         133 QPGDSGGSLFAGS-----TALGLTSGGSGNC  158 (181)
T ss_dssp             CTTCTTCEEEETT-----EEEEEEEEEEEET
T ss_pred             cCCCcCCeeEECC-----EEEEEEEEecCCC
Confidence            3799999999754     6899999987643

>d2o8la1 b.47.1.1 (A:1-216) V8 protease {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: V8 protease
species: Staphylococcus aureus [TaxId: 1280]

Probab=93.89  E-value=0.018  Score=35.84  Aligned_cols=52  Identities=15%  Similarity=0.337  Sum_probs=33.3

Q ss_pred             CCCcccCCCCCeeEEEcCCCcEEEEEEeecCCCCCCCCceeeecccchHHHHhhccC
Q psy7307          28 SRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGIGCGKTPGVYVQVNKYLRWIYNTAKG   84 (117)
Q Consensus        28 ~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~C~~~p~~~t~v~~~~~wi~~~~~g   84 (117)
                      ..+.|.|+||+|++..  +++  ++||.+++........++. .....+||++..+.
T Consensus       161 ~~~~~~G~SGgPv~~~--~g~--vVGI~s~g~~~~~~~~v~~-~~~~~~~i~~~i~~  212 (216)
T d2o8la1         161 DLSTTGGNSGSPVFNE--KNE--VIGIHWGGVPNEFNGAVFI-NENVRNFLKQNIED  212 (216)
T ss_dssp             SCCCCTTCTTCEEECT--TSC--EEEEEEEEETTTEEEEEEC-CHHHHHHHHHHCTT
T ss_pred             ecCcCCCCCCCcEECC--CCE--EEEEEeeecCCCCcceEec-CHHHHHHHHHhhhh
Confidence            3567999999999843  455  9999987722221222221 13466899887753

>d2sgaa_ b.47.1.1 (A:) Protease A {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease A
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=92.66  E-value=0.027  Score=34.43  Aligned_cols=42  Identities=38%  Similarity=0.597  Sum_probs=28.7

Q ss_pred             CcccCCCCCeeEEEcCCCcEEEEEEeecCCC-CCC-CCceeeecccchH
Q psy7307          30 QAQTGDSGGPLLLQRPDKQWTIIGVVSWGIG-CGK-TPGVYVQVNKYLR   76 (117)
Q Consensus        30 ~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~~-C~~-~p~~~t~v~~~~~   76 (117)
                      ....||||+||+..   ++  ++||++.+.. |.. ...+|+.+..+++
T Consensus       131 ~~~~GdSGGPv~~~---~~--~vGi~sgg~~~~~~~~~~~~~pv~~~l~  174 (181)
T d2sgaa_         131 CAQPGDSGGSLFAG---ST--ALGLTSGGSGNCRTGGTTFYQPVTEALS  174 (181)
T ss_dssp             CCCTTCTTCEEEET---TE--EEEEEEEEEEETTTEEEEEEEEHHHHHH
T ss_pred             eccCCCcCCeeEEC---CE--EEEEEEEecCCCCCCceEEEEEHHHHHH
Confidence            34589999999964   33  8999998644 333 3467777665544

>d2qaaa1 b.47.1.1 (A:16-242) Protease B {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease B
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=88.45  E-value=0.15  Score=30.91  Aligned_cols=24  Identities=50%  Similarity=0.744  Sum_probs=19.7

Q ss_pred             cCCCCCceeeccCCCcEEEEEeeeeCccc
Q psy7307          83 KGDSGGPLLLQRPDKQWTIIGVVSWGIGC  111 (117)
Q Consensus        83 ~gdsg~pl~~~~~~~~~~l~Gi~s~~~~C  111 (117)
                      .||||+|+...+     .++||++.+..+
T Consensus       138 ~GdSGGPv~~~~-----~~vGi~~~g~~~  161 (185)
T d2qaaa1         138 PGDSGGPLYSGT-----RAIGLTSGGSGN  161 (185)
T ss_dssp             TTCTTCEEEETT-----EEEEEEEEEEEE
T ss_pred             CCcccceeEECC-----EEEEEEEEeecC
Confidence            699999999753     689999987643

>d2o8la1 b.47.1.1 (A:1-216) V8 protease {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: V8 protease
species: Staphylococcus aureus [TaxId: 1280]

Probab=87.93  E-value=0.12  Score=31.89  Aligned_cols=27  Identities=30%  Similarity=0.591  Sum_probs=20.7

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCcc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG  110 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~  110 (117)
                      +++.|+||+|++-.  ++  .++||.++|..
T Consensus       163 ~~~~G~SGgPv~~~--~g--~vVGI~s~g~~  189 (216)
T d2o8la1         163 STTGGNSGSPVFNE--KN--EVIGIHWGGVP  189 (216)
T ss_dssp             CCCTTCTTCEEECT--TS--CEEEEEEEEET
T ss_pred             CcCCCCCCCcEECC--CC--EEEEEEeeecC
Confidence            56789999999833  22  59999998853

>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Epidermolytic (exfoliative) toxin A
species: Staphylococcus aureus [TaxId: 1280]

Probab=87.48  E-value=0.15  Score=32.12  Aligned_cols=27  Identities=22%  Similarity=0.375  Sum_probs=20.5

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCcc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGIG  110 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~~  110 (117)
                      .+..|+||||++-.  +  +.++||.+++..
T Consensus       189 ~~~~G~SGgPl~~~--~--g~vVGI~~~~~~  215 (242)
T d1agja_         189 FTVPGNSGSGIFNS--N--GELVGIHSSKVS  215 (242)
T ss_dssp             CCCGGGTTCEEECT--T--SEEEEEEEEEEE
T ss_pred             ccCCccCCCcEECC--C--CeEEEEEeEeec
Confidence            45689999999833  2  269999998764

>d2h5ca1 b.47.1.1 (A:15A-245) alpha-Lytic protease {Lysobacter enzymogenes, 495 [TaxId: 69]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: alpha-Lytic protease
species: Lysobacter enzymogenes, 495 [TaxId: 69]

Probab=84.70  E-value=0.26  Score=29.93  Aligned_cols=26  Identities=35%  Similarity=0.483  Sum_probs=19.6

Q ss_pred             hhccCCCCCceeeccCCCcEEEEEeeeeCc
Q psy7307          80 NTAKGDSGGPLLLQRPDKQWTIIGVVSWGI  109 (117)
Q Consensus        80 ~~~~gdsg~pl~~~~~~~~~~l~Gi~s~~~  109 (117)
                      ....||||+|+.-.+.    .++||+|.+.
T Consensus       137 ~~~~GdSGGPv~~~~g----~vvGI~sgg~  162 (198)
T d2h5ca1         137 CMGRGDSGGSWITSAG----QAQGVMSGGN  162 (198)
T ss_dssp             CCBTTCTTCEEECTTC----BEEEEEEEEC
T ss_pred             eeecccccccEEcCCC----EEEEEEcccc
Confidence            3468999999986432    4889999764

>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Epidermolytic (exfoliative) toxin A
species: Staphylococcus aureus [TaxId: 1280]

Probab=83.19  E-value=0.36  Score=30.28  Aligned_cols=27  Identities=19%  Similarity=0.388  Sum_probs=20.3

Q ss_pred             CCcccCCCCCeeEEEcCCCcEEEEEEeecCC
Q psy7307          29 RQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI   59 (117)
Q Consensus        29 ~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~   59 (117)
                      .+.+.|+||+||+..  .++  ++||.+.+.
T Consensus       188 ~~~~~G~SGgPl~~~--~g~--vVGI~~~~~  214 (242)
T d1agja_         188 GFTVPGNSGSGIFNS--NGE--LVGIHSSKV  214 (242)
T ss_dssp             CCCCGGGTTCEEECT--TSE--EEEEEEEEE
T ss_pred             cccCCccCCCcEECC--CCe--EEEEEeEee
Confidence            456789999999854  354  899987753

>d2h5ca1 b.47.1.1 (A:15A-245) alpha-Lytic protease {Lysobacter enzymogenes, 495 [TaxId: 69]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: alpha-Lytic protease
species: Lysobacter enzymogenes, 495 [TaxId: 69]

Probab=82.79  E-value=0.48  Score=28.63  Aligned_cols=29  Identities=34%  Similarity=0.406  Sum_probs=22.1

Q ss_pred             CCCCcccCCCCCeeEEEcCCCcEEEEEEeecCC
Q psy7307          27 TSRQAQTGDSGGPLLLQRPDKQWTIIGVVSWGI   59 (117)
Q Consensus        27 ~~~~~C~~dsG~pl~~~~~~~~~~~vgI~s~~~   59 (117)
                      .....+.||||+|++..  +++  ++||++.+.
T Consensus       134 ~~~~~~~GdSGGPv~~~--~g~--vvGI~sgg~  162 (198)
T d2h5ca1         134 GNACMGRGDSGGSWITS--AGQ--AQGVMSGGN  162 (198)
T ss_dssp             ECSCCBTTCTTCEEECT--TCB--EEEEEEEEC
T ss_pred             EeeeeecccccccEEcC--CCE--EEEEEcccc
Confidence            35567899999999964  355  899998753