Psyllid ID: psy7463

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MRYYESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAKVGEGNQGKEGGNQTEVGETSMLSNLSKHTHPLVCPSSNGREETQYFPFRSWVNTRTLESNPLKL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccHHHccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEcccccccccccccccEccccHHHHHcHccccccccccccccccEccccHHHHHcHcccccccccccccccccHHHHHHHHHcccccccccccccEccccccHHHHHHHHccccccccccccccEccccHHHEEEEEEccccccccccccccccEccccHHHHHEccccccccccccccccEccccHHHHHHHHccccccEcccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mryyesdlkdkvvpqkcplceRLYKSVYRMKEHMKkqhkgqlyecdccteyfIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHlvthippehrgkvsdaFFNKKQTALLTHYLKRNGiklqcnlcadtfcprsnmLRHYLLKHrgdkvfyacdrCDKRFSLLQNLKRHLAIHERIAYQCNvcdkkysrlsdYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAkvgegnqgkeggnqtevGETSMLsnlskhthplvcpssngreetqyfpfrswvntrtlesnplkl
Flexible Loop (DISEMBL)
mryyesdlkdkvvpqkcplceRLYKSVYRMKEHMkkqhkgqlyeCDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHLVThippehrgkvsdAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMMHtkfegqigemEDKVGEKKIGEIeakvgegnqgkeggnqTEVGETSMLSNLSKHTHPLVCPSSNGREETQyfpfrswvntrtlesnplkl
Low Complexity Region (SEG)
MRYYESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAkvgegnqgkeggnqTEVGETSMLSNLSKHTHPLVCPSSNGREETQYFPFRSWVNTRTLESNPLKL
Disordered region (IsUnstruct)
***********VVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMMHTKFEGQI**************************************************************YFPFRSWVN***********
Disordered Region (DISOPRED)
MRYYESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAKVGEGNQGKEGGNQTEVGETSMLSNLSKHTHPLVCPSSNGREETQYFPFRSWVNTRTLE*NPL**
Disordered Region (DISEMBL)
MRYYESDLKDKVVPQKCPLCERLYKSVYRMKE********QLYECDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAKVGEGNQGKEGGNQTEVGETSMLSNLSKHTHPLVCPSSNGREETQYFPFRSWVNTRT********
Disordered Region (DISPRO)
****ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAKVGEGNQGKEGGNQTEVGETSMLSNLSKHTHPLVCPSSNGREETQYFPFRSWVNTRTLESN****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRYYESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAKVGEGNQGKEGGNQTEVGETSMLSNLSKHTHPLVCPSSNGREETQYFPFRSWVNTRTLESNPLKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	319	2.2.26 [Sep-21-2011]
Q1H9T6	681	Zinc finger and BTB domai	yes	N/A	0.670	0.314	0.291	4e-17
Q5R633	688	Zinc finger and BTB domai	yes	N/A	0.670	0.311	0.286	1e-16
P10074	688	Zinc finger and BTB domai	yes	N/A	0.670	0.311	0.286	1e-16
Q3U288	666	Zinc finger protein 710 O	no	N/A	0.680	0.325	0.288	3e-16
Q8N1W2	664	Zinc finger protein 710 O	no	N/A	0.680	0.326	0.288	3e-16
P10076	861	Zinc finger protein 26 OS	no	N/A	0.661	0.245	0.291	4e-16
Q5TYW1	1059	Zinc finger protein 658 O	no	N/A	0.661	0.199	0.316	5e-16
Q8BQN6	292	Zinc finger protein OZF O	no	N/A	0.645	0.705	0.325	6e-16
Q0VGE8	651	Zinc finger protein 816 O	no	N/A	0.652	0.319	0.318	7e-16
Q4V348	819	Zinc finger protein 658B	no	N/A	0.652	0.253	0.313	9e-16

>sp|Q1H9T6|ZBT48_MOUSE Zinc finger and BTB domain-containing protein 48 OS=Mus musculus GN=Zbtb48 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 16/230 (6%)

Query: 9   KDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEH-----VR 63
           K   VP +CP C + + S Y +K H +K    + +EC  C + +  +    EH     + 
Sbjct: 278 KGAAVPVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 337

Query: 64  LHEGGIICRLCGEKFEKSL-MRDHLVTHIP--PEHRGKVSDAFFNKKQTALLTHYLKRNG 120
             E    C +C E F + + +R H+V+H    P      S  F  KK   L +H +K +G
Sbjct: 338 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKD--LQSHMIKLHG 395

Query: 121 IKL--QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHER- 177
                 C  CA  F  R+ +  H   KHRG+K+F  C+ C  R S    L+ H+    R 
Sbjct: 396 APKPHACPTCAKCFLSRTELQLHEAFKHRGEKLF-VCEECGHRASSRNGLQMHIKAKHRN 454

Query: 178 -IAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
              Y C  C   +++ ++  +H+  H G K +QCH+C K    +  L +H
Sbjct: 455 ERPYVCEFCSHAFTQKANLNMHLRTHTGEKPFQCHLCGKTFRTQASLDKH 504

Binds to and regulates the J and/or S elements in MHC II promoter.
Mus musculus (taxid: 10090)

>sp|Q5R633|ZBT48_PONAB Zinc finger and BTB domain-containing protein 48 OS=Pongo abelii GN=ZBTB48 PE=2 SV=1

 Score = 87.4 bits (215), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 16/230 (6%)

Query: 9   KDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEH-----VR 63
           K   VP +CP C + + S Y +K H +K    + +EC  C + +  +    EH     + 
Sbjct: 285 KGTAVPVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 344

Query: 64  LHEGGIICRLCGEKFEKSL-MRDHLVTHIP--PEHRGKVSDAFFNKKQTALLTHYLKRNG 120
             E    C +C E F + + +R H+V+H    P      S  F  KK   L +H +K +G
Sbjct: 345 RSEQVFTCSVCQETFRRRMELRVHMVSHTGEMPYKCSSCSQQFMQKKD--LQSHMIKLHG 402

Query: 121 IKL--QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHER- 177
                 C  CA  F  R+ +  H   KHRG+K+F  C+ C  R S    L+ H+    R 
Sbjct: 403 APKPHACPTCAKCFLSRTELQLHEAFKHRGEKLF-VCEECGHRASSRNGLQMHIKAKHRN 461

Query: 178 -IAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
              + C  C   +++ ++  +H+  H G K +QCH+C K    +  L +H
Sbjct: 462 ERPHVCEFCSHAFTQKANLNMHLRTHTGEKPFQCHLCGKTFRTQASLDKH 511

Binds to and regulates the J and/or S elements in MHC II promoter.

Pongo abelii (taxid: 9601)

>sp|P10074|ZBT48_HUMAN Zinc finger and BTB domain-containing protein 48 OS=Homo sapiens GN=ZBTB48 PE=1 SV=2

 Score = 87.4 bits (215), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 16/230 (6%)

Query: 9   KDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEH-----VR 63
           K   VP +CP C + + S Y +K H +K    + +EC  C + +  +    EH     + 
Sbjct: 285 KGTAVPVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 344

Query: 64  LHEGGIICRLCGEKFEKSL-MRDHLVTHIP--PEHRGKVSDAFFNKKQTALLTHYLKRNG 120
             E    C +C E F + + +R H+V+H    P      S  F  KK   L +H +K +G
Sbjct: 345 RSEQVFTCSVCQETFRRRMELRVHMVSHTGEMPYKCSSCSQQFMQKKD--LQSHMIKLHG 402

Query: 121 IKL--QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHER- 177
                 C  CA  F  R+ +  H   KHRG+K+F  C+ C  R S    L+ H+    R 
Sbjct: 403 APKPHACPTCAKCFLSRTELQLHEAFKHRGEKLF-VCEECGHRASSRNGLQMHIKAKHRN 461

Query: 178 -IAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
              + C  C   +++ ++  +H+  H G K +QCH+C K    +  L +H
Sbjct: 462 ERPHVCEFCSHAFTQKANLNMHLRTHTGEKPFQCHLCGKTFRTQASLDKH 511

Binds to and regulates the J and/or S elements in MHC II promoter.

Homo sapiens (taxid: 9606)

>sp|Q3U288|ZN710_MOUSE Zinc finger protein 710 OS=Mus musculus GN=Znf710 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 8/225 (3%)

Query: 10  DKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHE--G 67
           + + P  CP C +L+K    ++ H+      + ++C  C + F      + H+ LH    
Sbjct: 320 NGIKPHSCPHCSKLFKQPSHLQTHLLTHQGTRPHKCQVCHKAFTQTSHLKRHMLLHSEVK 379

Query: 68  GIICRLCGEKFE-KSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKL-QC 125
              C  CG  F   S ++ H V H        V         T L  H     G  L QC
Sbjct: 380 PYSCHFCGRGFAYPSELKAHEVKHESGRCHVCVECGLDFSTLTQLKRHLASHQGPTLYQC 439

Query: 126 NLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERI-AYQCNV 184
             C  +F  RS  L++++LKH+  + F  C  C   FS + +LK+H   H+ +  ++C V
Sbjct: 440 LECDKSFHYRSQ-LQNHMLKHQNVRPF-VCTECGMEFSQIHHLKQHSLTHKGVKEFKCEV 497

Query: 185 CDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIM 228
           C ++++  ++ K HM +H   + YQCHIC K   +K  LK H+I+
Sbjct: 498 CGREFTLQANMKRHMLIHTSVRPYQCHICFKTFVQKQTLKTHMIV 542

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q8N1W2|ZN710_HUMAN Zinc finger protein 710 OS=Homo sapiens GN=ZNF710 PE=2 SV=2

 Score = 86.3 bits (212), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 8/225 (3%)

Query: 10  DKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHE--G 67
           + + P  CP C +L+K    ++ H+      + ++C  C + F      + H+ LH    
Sbjct: 318 NGIKPHSCPHCSKLFKQPSHLQTHLLTHQGTRPHKCQVCHKAFTQTSHLKRHMLLHSEVK 377

Query: 68  GIICRLCGEKFE-KSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKL-QC 125
              C  CG  F   S ++ H V H        V         T L  H     G  L QC
Sbjct: 378 PYSCHFCGRGFAYPSELKAHEVKHESGRCHVCVECGLDFSTLTQLKRHLASHQGPTLYQC 437

Query: 126 NLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERI-AYQCNV 184
             C  +F  RS  L++++LKH+  + F  C  C   FS + +LK+H   H+ +  ++C V
Sbjct: 438 LECDKSFHYRSQ-LQNHMLKHQNVRPF-VCTECGMEFSQIHHLKQHSLTHKGVKEFKCEV 495

Query: 185 CDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIM 228
           C ++++  ++ K HM +H   + YQCHIC K   +K  LK H+I+
Sbjct: 496 CGREFTLQANMKRHMLIHTSVRPYQCHICFKTFVQKQTLKTHMIV 540

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score = 85.5 bits (210), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 12/223 (5%)

Query: 14  PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG--GIIC 71
           P  C  C + +     +  H+++  + + YEC  C + FI      EH+R H G     C
Sbjct: 273 PYDCKECGKAFTERSSLIVHLRQHTREKSYECKECGKTFIQPSRLTEHMRSHTGEKPYQC 332

Query: 72  RLCGEKF-EKSLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNL 127
             CG  F   S +  HL TH    P        AF   + + LL H     G K  +C +
Sbjct: 333 DQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAF--TRSSYLLGHIRTHTGEKPYECKV 390

Query: 128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD 186
           C   F  RS +  H L KH G++  Y C  C+K F+    L  H+  H     ++C VC 
Sbjct: 391 CGKAFSGRSWLTIH-LRKHTGERP-YPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCA 448

Query: 187 KKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIM 228
           + +   S  K H  +H G K Y+C+ C K  + ++ L +H+++
Sbjct: 449 RTFRNSSCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLI 491

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q5TYW1|ZN658_HUMAN Zinc finger protein 658 OS=Homo sapiens GN=ZNF658 PE=2 SV=2

 Score = 85.5 bits (210), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 105/231 (45%), Gaps = 20/231 (8%)

Query: 14   PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG--GIIC 71
            P +C  C + +     +  H +     + YEC+ C + F D  A   H R+H G     C
Sbjct: 825  PYECNQCGKTFSQRTHLCAHQRIHTGEKPYECNECGKTFADNSALRAHHRIHTGEKPYEC 884

Query: 72   RLCGEKFEK-SLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNL 127
              CG+ F K S +R HL T     P    +    F  K  + +  H     G K  +CN+
Sbjct: 885  NDCGKTFSKTSHLRAHLRTRSGEKPYECSECGKTFSEK--SYVSAHQRVHTGEKPYECNV 942

Query: 128  CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERI-----AYQC 182
            C   F   S +  H  + H G+K  Y C+ C K FS     K HL+ H+RI      Y+C
Sbjct: 943  CGKPFAHNSTLRVHQRI-HTGEKS-YECNDCGKTFSQ----KSHLSAHQRIHTGEKPYEC 996

Query: 183  NVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHTK 232
            N C K +++ S  ++H  +H G K Y+C  C K   RK  L+ H   MHT+
Sbjct: 997  NECGKAFAQNSTLRVHQRIHTGEKPYECDECGKTFVRKAALRVHHTRMHTR 1047

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BQN6|OZF_MOUSE Zinc finger protein OZF OS=Mus musculus GN=Znf146 PE=2 SV=2

 Score = 85.1 bits (209), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 12/218 (5%)

Query: 16  KCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG--GIICRL 73
           +C  C + +     +  H K     + +EC  C + FI +     H R H G    IC+ 
Sbjct: 73  ECSDCGKAFSQKENLLTHQKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFICKE 132

Query: 74  CGEKFE-KSLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNLCA 129
           CG+ F  KS + +H   HI   P    +   AF  KK   L+ H     G K  +CN C 
Sbjct: 133 CGKTFSGKSNLTEHEKIHIGEKPFKCNECGTAFGQKK--YLIKHQNIHTGEKPYECNECG 190

Query: 130 DTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKK 188
             F  R++++ H  + H GDK  Y C+ C K FS   +L  H+  H     Y CN C K 
Sbjct: 191 KAFSQRTSLIVHVRI-HSGDKP-YECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKA 248

Query: 189 YSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
           +S+ S   +H+ +H G K YQC  C K  S+K++  RH
Sbjct: 249 FSQFSTLALHLRIHTGKKPYQCSECGKAFSQKSHHIRH 286

Mus musculus (taxid: 10090)

>sp|Q0VGE8|ZN816_HUMAN Zinc finger protein 816 OS=Homo sapiens GN=ZNF816 PE=2 SV=2

 Score = 85.1 bits (209), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 105/220 (47%), Gaps = 12/220 (5%)

Query: 14  PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLH--EGGIIC 71
           P KC  C + +     ++ H       + Y+C+ C   +I R   E H ++H  EG   C
Sbjct: 368 PYKCNECGKTFSQKSSLQCHHILHTGEKPYKCEECDNVYIRRSHLERHRKIHTGEGSYKC 427

Query: 72  RLCGEKFEK-SLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNL 127
           ++C + F   S + +H   H    P    K   +F   ++++L  H+    G K   CN 
Sbjct: 428 KVCDKVFRSDSYLAEHQRVHTGEKPYKCNKCGRSF--SRKSSLQYHHTLHTGEKPYTCNE 485

Query: 128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD 186
           C   F  R N+ RH+ L H G+K  Y C+ CDK FS   +L+RH  IH     Y+C VCD
Sbjct: 486 CGKVFSRRENLARHHRL-HAGEKP-YKCEECDKVFSRRSHLERHRRIHTGEKPYKCKVCD 543

Query: 187 KKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
           K +   S    H  +H G K Y+C+ C K  ++K  L +H
Sbjct: 544 KAFRSDSCLANHTRVHTGEKPYKCNKCAKVFNQKGILAQH 583

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q4V348|Z658B_HUMAN Zinc finger protein 658B OS=Homo sapiens GN=ZNF658B PE=2 SV=1

 Score = 84.7 bits (208), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 99/220 (45%), Gaps = 12/220 (5%)

Query: 14  PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG--GIIC 71
           P KC  CE+ +     ++ H       +LYEC  C + F  +     H R+H G     C
Sbjct: 473 PYKCNECEKTFAHNSALRAHQNIHTGEKLYECSECGKTFFQKTRLSTHRRIHTGEKPYEC 532

Query: 72  RLCGEKF-EKSLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNL 127
             CG+ F +KS +  H   H    P         F  K   AL+ H     G K  +CN 
Sbjct: 533 SKCGKTFSQKSYLSGHERIHTGEKPYECNVCGKTFVYK--AALIVHQRIHTGEKPYECNE 590

Query: 128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD 186
           C  TF  R+++  H  + H G+K  Y C+ C K F+    L+ H  IH     Y+CN C 
Sbjct: 591 CGKTFSQRTHLCAHQRI-HTGEKP-YECNECGKTFADNSALRAHHRIHTGEKPYECNDCG 648

Query: 187 KKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
           K +S+ S  + H+   +G K Y+C  C K  S K+Y+  H
Sbjct: 649 KTFSKTSHLRAHLRTRSGEKPYECSECGKTFSEKSYVSAH 688

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
328712679	716	PREDICTED: zinc finger protein 271-like	0.670	0.298	0.337	1e-20
449486830	1265	PREDICTED: taste receptor type 1 member	0.670	0.169	0.286	3e-19
256085592	486	zinc finger protein [Schistosoma mansoni	0.598	0.393	0.304	3e-19
353233176	486	putative zinc finger protein [Schistosom	0.598	0.393	0.304	4e-19
328707452	482	PREDICTED: zinc finger protein 79-like [	0.667	0.441	0.287	4e-19
348545615	402	PREDICTED: zinc finger protein 726-like,	0.699	0.554	0.326	8e-19
260794579	1068	hypothetical protein BRAFLDRAFT_119633 [	0.652	0.194	0.328	3e-18
170574609	392	Zinc finger, C2H2 type family protein [B	0.658	0.535	0.313	5e-18
328719280	1135	PREDICTED: zinc finger protein 729-like,	0.661	0.185	0.327	6e-18
443707618	734	hypothetical protein CAPTEDRAFT_198317 [	0.661	0.287	0.309	1e-17

>gi|328712679|ref|XP_003244876.1| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 107/225 (47%), Gaps = 11/225 (4%)

Query: 14  PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG--GIIC 71
           P  C +C++ +    R+K H +     + Y CD C + FID     EH R H G     C
Sbjct: 129 PYPCDVCDKSFSDNSRLKVHQRTHTGEKPYPCDVCDKSFIDNSCLTEHRRTHTGEKPYPC 188

Query: 72  RLCGEKF--EKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNLC 128
            +C + F    SL + H        +   V D  F+   ++L THY K  G K   C++C
Sbjct: 189 DVCDKSFSVSSSLTKHHRTHTGEKPYPCDVCDKSFS-VSSSLTTHYRKHTGEKPYPCDVC 247

Query: 129 ADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDK 187
             +F    ++ +HY + H G+K  Y CD CDK FS+  +L +H   H     Y C+VCDK
Sbjct: 248 DKSFSESGSLTKHYRM-HTGEKP-YPCDVCDKSFSVSSSLTKHHRTHTGEKPYPCDVCDK 305

Query: 188 KYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHT 231
            +S  S    H   H G K Y C +C K  S +N L +H   MHT
Sbjct: 306 SFSESSSLTTHYRKHTGEKPYPCDVCDKSFSERNSLIKH-HRMHT 349

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|449486830|ref|XP_004174322.1| PREDICTED: taste receptor type 1 member 1-like [Taeniopygia guttata]

 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 16/230 (6%)

Query: 9    KDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEH-----VR 63
            K   VP +CP C + + S Y +K H +K    + +EC  C + +  +    EH     + 
Sbjct: 862  KGTAVPVECPTCHKTFLSKYYLKVHNRKHTGEKPFECSKCGKCYFRKENLLEHEARNCMN 921

Query: 64   LHEGGIICRLCGEKFEKSL-MRDHLVTHIP--PEHRGKVSDAFFNKKQTALLTHYLKRNG 120
              E    C  C E F++ + +R H+V+H    P      S  F  KK+  L +H +K +G
Sbjct: 922  RSEQVFTCSACPEVFKRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKE--LQSHMIKLHG 979

Query: 121  IKL--QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHER- 177
                  C+ C+  F  R+ +  H   KHRG+K+F  C+ C  R S    L+ H+    R 
Sbjct: 980  APKPHACSTCSKCFLSRTELRLHEAFKHRGEKLF-VCEECGHRASSRNGLQMHIKAKHRN 1038

Query: 178  -IAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
               Y C  C   +++ ++  +H+  H G K +QCH+C K    +  L +H
Sbjct: 1039 ERPYVCEFCHHAFTQKANLNMHLRTHTGEKPFQCHLCGKTFRTQASLDKH 1088

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|256085592|ref|XP_002579001.1| zinc finger protein [Schistosoma mansoni]

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 104/223 (46%), Gaps = 32/223 (14%)

Query: 17  CPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGI--ICRLC 74
           C  C+RLY S + + EH++  H+G  + CD C + F  ++  +EH +    GI   C  C
Sbjct: 292 CNQCDRLYTSRFHLNEHLRANHEGVKFTCDLCNKEFAFKVGLDEHNKNIHKGIKYPCDQC 351

Query: 75  GEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCP 134
            +KF    M   L  H+   H+                       GIK  C  C   F  
Sbjct: 352 SKKFSSKCM---LNIHVKAIHK-----------------------GIKYICKQCDRKFNC 385

Query: 135 RSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHL-AIHERIAYQCNVCDKKYSRLS 193
           +SN+  H    H G  + + CD CD++F+    L RH+ +IHE + + C  CDKK+++ S
Sbjct: 386 KSNLNGHMKSVHEG--ITFQCDECDQKFTAKCQLNRHIQSIHEGVRFTCEQCDKKFTKQS 443

Query: 194 DYKIHMN-MHNGFKYQCHICLKCTSRKNYLKRHIIMMHTKFEG 235
               H+  +H G +Y C  C K  S K YL++H+   H + E 
Sbjct: 444 TLHDHVKVVHEGLRYSCQFCGKSFSTKKYLRKHVRNNHEREES 486

Source: Schistosoma mansoni

Species: Schistosoma mansoni

Genus: Schistosoma

Family: Schistosomatidae

Order: Strigeidida

Class: Trematoda

Phylum: Platyhelminthes

Superkingdom: Eukaryota

>gi|353233176|emb|CCD80531.1| putative zinc finger protein [Schistosoma mansoni]

 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 104/223 (46%), Gaps = 32/223 (14%)

Query: 17  CPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGI--ICRLC 74
           C  C+RLY S + + EH++  H+G  + CD C + F  ++  +EH +    GI   C  C
Sbjct: 292 CNQCDRLYTSRFHLNEHLRANHEGVKFTCDLCNKEFAFKVGLDEHNKNIHKGIKYPCDQC 351

Query: 75  GEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCP 134
            +KF    M   L  H+   H+                       GIK  C  C   F  
Sbjct: 352 SKKFSSKCM---LNIHVKAIHK-----------------------GIKYICKQCDRKFNC 385

Query: 135 RSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHL-AIHERIAYQCNVCDKKYSRLS 193
           +SN+  H    H G  + + CD CD++F+    L RH+ +IHE + + C  CDKK+++ S
Sbjct: 386 KSNLNGHMKSVHEG--ITFQCDECDQKFTAKCQLNRHIQSIHEGVRFTCEQCDKKFTKQS 443

Query: 194 DYKIHMN-MHNGFKYQCHICLKCTSRKNYLKRHIIMMHTKFEG 235
               H+  +H G +Y C  C K  S K YL++H+   H + E 
Sbjct: 444 TLHDHVKVVHEGLRYSCQFCGKSFSTKKYLRKHVRNNHEREES 486

Source: Schistosoma mansoni

Species: Schistosoma mansoni

Genus: Schistosoma

Family: Schistosomatidae

Order: Strigeidida

Class: Trematoda

Phylum: Platyhelminthes

Superkingdom: Eukaryota

>gi|328707452|ref|XP_003243400.1| PREDICTED: zinc finger protein 79-like [Acyrthosiphon pisum]

 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 115/257 (44%), Gaps = 44/257 (17%)

Query: 14  PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG--GIIC 71
           P KC LC   +     +  H +     + Y+CD C + F  + A + H+ +H G     C
Sbjct: 230 PFKCDLCTHAFSHKGDLTNHTRTHTGVKPYKCDICNQAFSQKTALKSHITIHTGEKSYKC 289

Query: 72  RLCGEKFEKSLMRDHLVTHIPPEHRG------KVSDAFFNKKQ----------------- 108
            +C   F +   + +L++HI  +H G       + +  F +K                  
Sbjct: 290 AICDTGFAR---KPYLISHIIRKHNGVKPYKCDICNQSFPQKGDLTSHTRTHTGLKPYKC 346

Query: 109 ----------TALLTHYLKRNGIK-LQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDR 157
                     + L+TH     G+K  +C++C   F   S++ +H  + H G K  Y CD 
Sbjct: 347 DICDKGLGSISNLITHTRTHTGVKPFKCDICDKGFVSSSDLTKHTRI-HTGVKP-YKCDT 404

Query: 158 CDKRFSLLQNLKRHLAIHERI-AYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKC 215
           CDK F    +L+RH  IH  +  Y+C++CDK +   SD + H  +H G K Y+C IC K 
Sbjct: 405 CDKWFGSSGDLRRHTKIHTGVKPYKCDICDKWFGSSSDLRRHTKIHTGVKPYKCDICDKA 464

Query: 216 TSRKNYLKRHIIMMHTK 232
                YLKRH  M+H K
Sbjct: 465 FYENTYLKRH-KMIHQK 480

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348545615|ref|XP_003460275.1| PREDICTED: zinc finger protein 726-like, partial [Oreochromis niloticus]

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 117/242 (48%), Gaps = 19/242 (7%)

Query: 14  PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG--GIIC 71
           P  C LC + +     +K+H       + Y CD C + F      ++H  +H G     C
Sbjct: 84  PYSCDLCGKSFAWAGDLKKHQIIHSGVKPYSCDLCGKSFTWAGDLKKHQLIHSGVKPYSC 143

Query: 72  RLCGEKFEKSLMRDHLVTHIPPEHRG------KVSDAFFNKKQTALLTHYLKRNGIKL-Q 124
            LCG+ F +S   +HL TH    H G       +   FF++  + L  H L  +G+K   
Sbjct: 144 ELCGKSFSQS---EHLKTH-QIIHSGVKRYSCDLCGKFFSRAHS-LKNHQLIHSGVKAYS 198

Query: 125 CNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERI-AYQCN 183
           C+LC  +F    N+  H L+ H G K  Y+CD C K FS  Q LKRH  IH  +  Y C+
Sbjct: 199 CDLCGKSFSLAQNLKTHQLI-HSGFKP-YSCDLCGKTFSQAQTLKRHQLIHSGVKVYSCD 256

Query: 184 VCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMED 242
           +C K +S     + H  +H+GFK Y C +C K  +R   LK+H  ++H+  +  I E+  
Sbjct: 257 LCGKSFSLAQTLETHQLIHSGFKPYSCDLCGKSFTRAGGLKKH-QLIHSGVKPYICELCG 315

Query: 243 KV 244
           K 
Sbjct: 316 KA 317

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260794579|ref|XP_002592286.1| hypothetical protein BRAFLDRAFT_119633 [Branchiostoma floridae] gi|229277502|gb|EEN48297.1| hypothetical protein BRAFLDRAFT_119633 [Branchiostoma floridae]

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 14/222 (6%)

Query: 14  PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG--GIIC 71
           P KC +C   +  + ++K HM+     + Y C  C++ F  R   +EH+R H G     C
Sbjct: 135 PYKCEVCSTHFSELSKLKRHMRTHTGEKPYSCQECSKQFSTRSKLKEHMRTHTGEKPYKC 194

Query: 72  RLCGEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALL----THYLKRNGIK-LQCN 126
             C ++F K    +HL TH+      K        KQ  LL    TH     G+K  +CN
Sbjct: 195 EECSKQFSK---LNHLKTHMRTHTGEKPYRCEECSKQFTLLHNLKTHMRTHTGVKRYKCN 251

Query: 127 LCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC 185
            C+  F  + N+ +H +  H G+K  Y C+ C+++FS L NLKRH+  H     Y+C  C
Sbjct: 252 ECSKQFSTQGNLKKH-MHAHTGEKP-YRCEECNRQFSELSNLKRHIRTHTGEKPYKCEEC 309

Query: 186 DKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHI 226
            +++S L   K HM  H G K Y C  C K  ++   LK H+
Sbjct: 310 SRQFSELGSLKTHMRTHTGEKPYSCEKCSKQFTQLGNLKTHM 351

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|170574609|ref|XP_001892888.1| Zinc finger, C2H2 type family protein [Brugia malayi] gi|158601344|gb|EDP38279.1| Zinc finger, C2H2 type family protein [Brugia malayi]

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 10/220 (4%)

Query: 14  PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG--GIIC 71
           P  CP+C++ +     MK+HM      + Y C  C + F D    ++H+  H G     C
Sbjct: 144 PCSCPMCKKNFTQFSNMKKHMMTHTGEKPYSCPTCKKNFTDSSNMKKHMMTHTGEKPYSC 203

Query: 72  RLCGEKFEKSL-MRDHLVTHIPPEHRGKVSDAFFNKKQTA-LLTHYLKRNGIK-LQCNLC 128
            +C + F +S  M+ H++TH   E     S    N  Q+  +  H +   G K   C  C
Sbjct: 204 SICKKNFAQSGDMKKHMMTHT-GEKPYSCSICKKNFAQSGDMKKHMMTHTGQKPYSCPTC 262

Query: 129 ADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH-ERIAYQCNVCDK 187
              F   SNM +H ++ H  +K  Y+C  C   F+   NLK H+  H +   Y C++C K
Sbjct: 263 KKNFTDSSNMKKH-MMTHTREKP-YSCSLCKMNFTQFSNLKEHMMFHADEKPYSCSICKK 320

Query: 188 KYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHI 226
            +++L D K HM +HNG K + C IC K  + K++L+ H+
Sbjct: 321 NFTQLGDMKKHMMIHNGEKLHSCPICRKSFTHKHHLQSHM 360

Source: Brugia malayi

Species: Brugia malayi

Genus: Brugia

Family: Onchocercidae

Order: Spirurida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|328719280|ref|XP_001943706.2| PREDICTED: zinc finger protein 729-like, partial [Acyrthosiphon pisum]

 Score = 97.8 bits (242), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 112/223 (50%), Gaps = 12/223 (5%)

Query: 14  PQKCPLCERLYKSVYRMKEHMKKQHKGQ-LYECDCCTEYFIDRIAYEEHVRLHEG--GII 70
           P KC  CE+ +     +  H K  H G+  Y+C+ C + F  +     H R H G    I
Sbjct: 774 PYKCNSCEQAFSHKSSLIRH-KMIHTGEKPYKCNTCDQAFSRKSHLTTHTRKHTGEKPYI 832

Query: 71  CRLCGEKFE--KSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNL 127
           C  C + F    SL+R  ++      ++    D  F++K + L TH  K  G K   CN 
Sbjct: 833 CNTCDQAFSHYSSLIRHKMIHTGEKPYKCNTCDQAFSRK-SHLTTHTRKHTGEKPYICNT 891

Query: 128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD 186
           C   F   S+++ H    H G+K F  CD CD+ FS + +LK H ++H     ++C+ CD
Sbjct: 892 CDQAFSHYSSLINH-TRTHTGEKPF-KCDSCDQAFSRISSLKYHTSLHTGEKPFRCDDCD 949

Query: 187 KKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIM 228
           K + R+SD K H  +H G K ++C+ C +  SRK++L RH  +
Sbjct: 950 KAFPRISDLKYHTRIHTGEKLFKCNNCDQAFSRKSHLTRHTTI 992

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443707618|gb|ELU03131.1| hypothetical protein CAPTEDRAFT_198317 [Capitella teleta]

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 12/223 (5%)

Query: 14  PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGII--C 71
           P +C +C++ +     +K+HM+     + YEC  C + F   +  +EH+RLH G     C
Sbjct: 93  PHECSVCKKTFTWSGTLKKHMRMHTGEKPYECSVCKKTFTLSVTLKEHMRLHTGEKPHEC 152

Query: 72  RLCGEKFEK-SLMRDHLVTHIPPEHR--GKVSDAFFNKKQTALLTHYLKRNGIKL-QCNL 127
            +C + F     +R H++ H        G    AFF  +   L  H L   G +  +C++
Sbjct: 153 SVCKKTFSHGGCLRKHMLKHTGERQYECGLCEKAFF--ESWTLKIHMLTHTGERPHECSV 210

Query: 128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD 186
           C  TF  RS  L+ ++  H G++  + C  C+K F    NLK+H+  H     Y+CNVC 
Sbjct: 211 CKKTF-NRSANLKEHMRLHTGERP-HECSVCNKTFIWRGNLKKHMKTHTGEKPYECNVCG 268

Query: 187 KKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIM 228
           K  SR    K HM  H G + Y+C +C K  ++   LK H+++
Sbjct: 269 KTLSRDCSLKTHMRTHTGERPYECSVCKKTFAQSGTLKGHMLI 311

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
ZFIN|ZDB-GENE-080219-33	334	zgc:171599 "zgc:171599" [Danio	0.670	0.640	0.312	6.6e-26
ZFIN|ZDB-GENE-080219-42	336	zgc:174712 "zgc:174712" [Danio	0.677	0.642	0.324	4.6e-25
UNIPROTKB|J9P3R2	612	J9P3R2 "Uncharacterized protei	0.667	0.348	0.337	5.5e-25
UNIPROTKB|F1RKN0	686	ZNF569 "Uncharacterized protei	0.667	0.310	0.337	5.7e-25
UNIPROTKB|F1MH55	685	ZNF569 "Uncharacterized protei	0.667	0.310	0.337	9.3e-25
ZFIN|ZDB-GENE-030131-2123	338	zgc:174573 "zgc:174573" [Danio	0.661	0.624	0.316	9.7e-25
ZFIN|ZDB-GENE-081030-5	336	si:ch73-92e7.3 "si:ch73-92e7.3	0.677	0.642	0.324	9.7e-25
UNIPROTKB|P0CJ79	500	ZNF888 "Zinc finger protein 88	0.705	0.45	0.329	1.6e-24
UNIPROTKB|Q0VGE8	651	ZNF816 "Zinc finger protein 81	0.664	0.325	0.330	1.7e-24
UNIPROTKB|Q17RR6	527	ZNF569 "ZNF569 protein" [Homo	0.667	0.404	0.328	4.2e-24

ZFIN|ZDB-GENE-080219-33 zgc:171599 "zgc:171599" [Danio rerio (taxid:7955)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 71/227 (31%), Positives = 114/227 (50%)

Query:    14 PQKCPLCERLYKSVYRMKEHMKKQHKGQL-YECDCCTEYFIDRIAYEEHVRLHEGGII-- 70
             P  C  C + ++    +  HM   H G+  + C  C + F   +    H+ +H G     
Sbjct:   108 PFTCTQCGKKFRQSSHLNRHMMI-HTGEKPFACTQCGKRFRYTLNLNLHMMIHTGEKPHK 166

Query:    71 CRLCGEKF-EKSLMRDHLVTHIPPE-HRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNL 127
             C  CG+ F   + ++DHL  H   + +   V +  F+ + T L+ H     G++   C+ 
Sbjct:   167 CDQCGKSFLSAAQLKDHLRVHTKEKPYSCSVCEKSFSLQST-LIKHQKIHTGVREFVCSE 225

Query:   128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD 186
             C  TF     + +H ++ H G+K  Y C  CDKRF+ +QNLKRH  IH     Y+C+ CD
Sbjct:   226 CEKTFVTAGQLKQHQVI-HTGEKP-YTCSHCDKRFTQVQNLKRHEVIHSGEKPYKCSHCD 283

Query:   187 KKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHTK 232
             K +++L + K H  +H G K Y+C  CLK  ++ + L++H   MH K
Sbjct:   284 KSFTQLPNLKCHERIHTGEKPYRCQQCLKRFTQLSQLQKHT-NMHRK 329

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-080219-42 zgc:174712 "zgc:174712" [Danio rerio (taxid:7955)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 75/231 (32%), Positives = 111/231 (48%)

Query:    11 KVVPQKCPLCERLYKSVYRMKEHMKKQHKGQL-YECDCCTEYFIDRIAYEEHVRLHEGGI 69
             +V P  C LC + YK +  +++H +K H G+  Y CD C + F       +H+++H G  
Sbjct:    84 EVKPNSCTLCGKSYKQLSHLQQH-QKIHTGERPYTCDQCGKRFRRSSTLNQHMKIHTGER 142

Query:    70 --ICRLCGEKFEK-SLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQ 124
                C  CG  F + S +R HL  H    P    +   +F   + + L  H     G+K  
Sbjct:   143 PHYCDQCGRTFLRTSELRRHLTVHTNEKPYSCSECGKSF--SRLSNLKVHQKIHAGVKEH 200

Query:   125 -CNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQC 182
              C  C  +F   + +L+ +   H G+K  Y C  CDKRFSLL +LK H  IH     Y C
Sbjct:   201 VCIECGKSFI-NAQVLQIHQRIHTGEKP-YKCSHCDKRFSLLHSLKSHERIHTGEKPYTC 258

Query:   183 NVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHTK 232
               C K +   S  + HM +H   K ++C  C K   R ++LK H+ + HTK
Sbjct:   259 TQCGKSFKNSSQLRQHMMIHTRVKTHKCDQCGKTFLRPSHLKNHLTV-HTK 308

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|J9P3R2 J9P3R2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 292 (107.8 bits), Expect = 5.5e-25, P = 5.5e-25
 Identities = 77/228 (33%), Positives = 109/228 (47%)

Query:    14 PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG--IIC 71
             P +C  C + +    ++ +H K   + Q YEC+ C + FI       H R+H G     C
Sbjct:   251 PYECKKCRKAFSHKEKLIKHHKIHSREQSYECNECGKAFIKMSNLIRHQRIHTGEKPYAC 310

Query:    72 RLCGEKF-EKSLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNL 127
             + CG+ F +KS + DH   H    P    +   AF ++KQ+ L  H     G K   CN 
Sbjct:   311 KECGKSFSQKSNLIDHEKIHTGEKPYECNECGKAF-SQKQS-LTAHQKVHTGEKPYACNE 368

Query:   128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD 186
             C   F PR   L  ++  H G+K  Y CD+C K FS    L  H+ IH     Y+CN C 
Sbjct:   369 CGKAF-PRIASLALHMRSHTGEKP-YKCDKCGKAFSQFSMLIIHVRIHTGEKPYECNECG 426

Query:   187 KKYSRLSDYKIHMNMHNGFK-YQCHICLKCTS-RKNYLKRHIIMMHTK 232
             K +S+ S   +HM  H G K Y+C  C K  S +KN++    I  HT+
Sbjct:   427 KSFSQSSALTVHMRSHTGEKPYECKECRKAFSHKKNFITHQKI--HTR 472

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1RKN0 ZNF569 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 293 (108.2 bits), Expect = 5.7e-25, P = 5.7e-25
 Identities = 77/228 (33%), Positives = 110/228 (48%)

Query:    14 PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG--IIC 71
             P +C  C + +    ++ +H K   + Q YEC+ C + FI       H R+H G     C
Sbjct:   213 PYECKKCGKAFSHKEKLIKHHKIHSREQSYECNECGKAFIKMSNLIRHQRIHTGEKPYAC 272

Query:    72 RLCGEKF-EKSLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNL 127
             + CG+ F +KS + DH   H    P    +   AF ++KQ+ L+ H     G K   CN 
Sbjct:   273 KECGKSFSQKSNLIDHEKIHTGEKPYECNECGKAF-SQKQS-LIAHQKVHTGEKPYACNE 330

Query:   128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD 186
             C   F PR   L  ++  H G+K  Y CD+C K FS    L  H+ IH     Y+CN C 
Sbjct:   331 CGKAF-PRIASLALHMRSHTGEKP-YKCDKCGKAFSQFSMLIIHVRIHTGEKPYECNECG 388

Query:   187 KKYSRLSDYKIHMNMHNGFK-YQCHICLKCTS-RKNYLKRHIIMMHTK 232
             K +S+ S   +HM  H G K Y+C  C K  S +KN++    I  HT+
Sbjct:   389 KSFSQSSALTVHMRSHTGEKPYECKECRKAFSHKKNFITHQKI--HTR 434

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MH55 ZNF569 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 291 (107.5 bits), Expect = 9.3e-25, P = 9.3e-25
 Identities = 77/228 (33%), Positives = 110/228 (48%)

Query:    14 PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG--IIC 71
             P +C  C + +    ++ +H K   + Q YEC+ C + FI       H R+H G     C
Sbjct:   212 PYECKKCRKAFGHKEKLIKHHKIHSREQSYECNECGKAFIKMSNLIRHQRIHTGEKPYAC 271

Query:    72 RLCGEKF-EKSLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNL 127
             + CG+ F +KS + DH   H    P    +   AF ++KQ+ L+ H     G K   CN 
Sbjct:   272 KECGKSFSQKSNLIDHEKIHTGEKPYECHECGKAF-SQKQS-LIAHQKVHTGEKPYACNE 329

Query:   128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD 186
             C   F PR   L  ++  H G+K  Y CD+C K FS    L  H+ IH     Y+CN C 
Sbjct:   330 CGKAF-PRIASLALHMRSHTGEKP-YKCDKCGKAFSQFSMLIIHVRIHTGEKPYECNECG 387

Query:   187 KKYSRLSDYKIHMNMHNGFK-YQCHICLKCTS-RKNYLKRHIIMMHTK 232
             K +S+ S   +HM  H G K Y+C  C K  S +KN++    I  HT+
Sbjct:   388 KSFSQSSALTVHMRSHTGEKPYECKECRKAFSHKKNFITHQKI--HTR 433

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-030131-2123 zgc:174573 "zgc:174573" [Danio rerio (taxid:7955)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 71/224 (31%), Positives = 110/224 (49%)

Query:    17 CPLCERLYKSVYRMKEHMKKQHKGQLYE-CDCCTEYFIDRIAYEEHVRLHEGGI--ICRL 73
             C  C + +     +  HMK  H G+ +  C  C+  F  + +  EH+++H G     C+ 
Sbjct:    92 CHQCGKSFTCKQGLTLHMKI-HTGERHHTCQHCSRSFTRKQSLTEHIKVHTGERHHACQQ 150

Query:    74 CGEKF-EKSLMRDHLVTHIPPE-HRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNLCAD 130
             CG+ F  K  +++H+ TH   + +  +     FN+KQ  L  H +   G K   C+ C  
Sbjct:   151 CGKSFTRKQHLKNHMTTHSAEKPYTCQQCGKSFNRKQN-LADHMMIHTGEKPCICHQCGK 209

Query:   131 TFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKY 189
             +F   +N+  H  + H G+K+ Y C++C + F+  QNL  H+  H     Y C  C K +
Sbjct:   210 SFTRLTNLTEHMRI-HSGEKL-YTCNQCGRSFTWKQNLTNHMRTHTGETPYTCQQCGKSF 267

Query:   190 SRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHTK 232
             +R      HM +HNG K Y C  C K  S K YLKRH   +H+K
Sbjct:   268 ARKQILIEHMWIHNGEKPYNCQQCGKGFSTKAYLKRHQ-SVHSK 310

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-081030-5 si:ch73-92e7.3 "si:ch73-92e7.3" [Danio rerio (taxid:7955)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 75/231 (32%), Positives = 110/231 (47%)

Query:    11 KVVPQKCPLCERLYKSVYRMKEHMKKQHKGQL-YECDCCTEYFIDRIAYEEHVRLHEGGI 69
             +V P  C LC + YK    +++H +K H G+  Y CD C + F       +H+++H G  
Sbjct:    84 EVKPNSCTLCGKSYKQPSHLQQH-QKIHTGERPYTCDQCGKRFRRSSTLNQHMKIHTGER 142

Query:    70 --ICRLCGEKFEK-SLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQ 124
                C  CG  F + S +R HL  H    P    +   +F   + + L  H     G+K  
Sbjct:   143 PHYCDQCGRTFLRTSELRRHLTVHTNEKPYSCSECGKSF--SRLSNLKVHQKIHAGVKEH 200

Query:   125 -CNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQC 182
              C  C  +F   + +L+ +   H G+K  Y C  CDKRFSLL +LK H  IH     Y C
Sbjct:   201 VCIECGKSFI-NAQVLQIHQRIHTGEKP-YKCSHCDKRFSLLHSLKSHERIHTGEKPYTC 258

Query:   183 NVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHTK 232
               C K +   S  + HM +H   K ++C  C K   R ++LK H+ + HTK
Sbjct:   259 TGCGKSFKNSSQLRQHMMIHTRVKTHKCDQCGKAFLRPSHLKNHLTV-HTK 308

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|P0CJ79 ZNF888 "Zinc finger protein 888" [Homo sapiens (taxid:9606)]

 Score = 285 (105.4 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 79/240 (32%), Positives = 113/240 (47%)

Query:    14 PQKCPLCERLYKSVYRMKEHMKKQHKGQL-YECDCCTEYFIDRIAYEEHVRLHEGG--II 70
             P KC  C +++     +  H  + H G+  Y+C  C + F  +   E H R+H G     
Sbjct:   192 PYKCNECGKVFNQQSNLARH-HRVHTGEKPYQCKECDKVFSRKSYLERHRRIHTGEKPYK 250

Query:    71 CRLCGEKFEK-SLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCN 126
             C++C + F   S +  H+V H    P    +    F   + +ALL H     G K  +CN
Sbjct:   251 CKVCDKAFRHDSHLAQHIVIHTREKPYKCNECGKTF--GENSALLVHKTIHTGEKPYKCN 308

Query:   127 LCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC 185
              C   F  +SN+ RH+ L H G+K  Y C  CDK FS   +L+RH  IH     Y+C VC
Sbjct:   309 ECGKVFNQQSNLARHHRL-HTGEKP-YKCKECDKVFSRKSHLERHRRIHTGEKPYKCKVC 366

Query:   186 DKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKV 244
             DK + R S    H  +H G K Y+C+ C K    ++ L  H   +HT  +    E  DKV
Sbjct:   367 DKAFRRDSRLAYHHRLHTGEKPYKCNECGKVFRTQSQLACHH-RLHTGEKPYKCEECDKV 425

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q0VGE8 ZNF816 "Zinc finger protein 816" [Homo sapiens (taxid:9606)]

 Score = 288 (106.4 bits), Expect = 1.7e-24, P = 1.7e-24
 Identities = 75/227 (33%), Positives = 109/227 (48%)

Query:    14 PQKCPLCERLYKSVYRMKEHMKKQHKGQL-YECDCCTEYFIDRIAYEEHVRLH--EGGII 70
             P KC  C + +     ++ H    H G+  Y+C+ C   +I R   E H ++H  EG   
Sbjct:   368 PYKCNECGKTFSQKSSLQCH-HILHTGEKPYKCEECDNVYIRRSHLERHRKIHTGEGSYK 426

Query:    71 CRLCGEKFEK-SLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCN 126
             C++C + F   S + +H   H    P    K   +F  K  ++L  H+    G K   CN
Sbjct:   427 CKVCDKVFRSDSYLAEHQRVHTGEKPYKCNKCGRSFSRK--SSLQYHHTLHTGEKPYTCN 484

Query:   127 LCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC 185
              C   F  R N+ RH+ L H G+K  Y C+ CDK FS   +L+RH  IH     Y+C VC
Sbjct:   485 ECGKVFSRRENLARHHRL-HAGEKP-YKCEECDKVFSRRSHLERHRRIHTGEKPYKCKVC 542

Query:   186 DKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHT 231
             DK +   S    H  +H G K Y+C+ C K  ++K  L +H   +HT
Sbjct:   543 DKAFRSDSCLANHTRVHTGEKPYKCNKCAKVFNQKGILAQHQ-RVHT 588

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q17RR6 ZNF569 "ZNF569 protein" [Homo sapiens (taxid:9606)]

 Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 75/228 (32%), Positives = 109/228 (47%)

Query:    14 PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG--IIC 71
             P +C  C + +    ++ +H K   + Q Y+C+ C + FI       H R+H G     C
Sbjct:    54 PYECSNCRKAFSHKEKLIKHYKIHSREQSYKCNECGKAFIKMSNLIRHQRIHTGEKPYAC 113

Query:    72 RLCGEKF-EKSLMRDHLVTHI--PPEHRGKVSDAFFNKKQTALLTHYLKRNGIK-LQCNL 127
             + C + F +KS + DH   H    P    +   AF ++KQ+ L+ H     G K   CN 
Sbjct:   114 KECEKSFSQKSNLIDHEKIHTGEKPYECNECGKAF-SQKQS-LIAHQKVHTGEKPYACNE 171

Query:   128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD 186
             C   F PR   L  ++  H G+K  Y CD+C K FS    L  H+ IH     Y+CN C 
Sbjct:   172 CGKAF-PRIASLALHMRSHTGEKP-YKCDKCGKAFSQFSMLIIHVRIHTGEKPYECNECG 229

Query:   187 KKYSRLSDYKIHMNMHNGFK-YQCHICLKCTS-RKNYLKRHIIMMHTK 232
             K +S+ S   +HM  H G K Y+C  C K  S +KN++    I  HT+
Sbjct:   230 KAFSQSSALTVHMRSHTGEKPYECKECRKAFSHKKNFITHQKI--HTR 275

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
KOG2462|consensus	279		99.96
KOG1074|consensus	958		99.95
KOG3608|consensus	467		99.95
KOG2462|consensus	279		99.95
KOG3608|consensus	467		99.94
KOG3623|consensus	1007		99.87
KOG1074|consensus	958		99.86
KOG3623|consensus	1007		99.85
KOG3576|consensus	267		99.69
KOG3576|consensus	267		99.66
PLN03086	567	PRLI-interacting factor K; Provisional	99.42
PLN03086	567	PRLI-interacting factor K; Provisional	99.24
PHA00733	128	hypothetical protein	99.23
PHA00733	128	hypothetical protein	99.12
KOG3993|consensus	500		99.06
KOG3993|consensus	500		99.0
PHA02768	55	hypothetical protein; Provisional	98.99
PHA02768	55	hypothetical protein; Provisional	98.94
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.67
PHA00616	44	hypothetical protein	98.55
PHA00732	79	hypothetical protein	98.45
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.4
PHA00616	44	hypothetical protein	98.37
PHA00732	79	hypothetical protein	98.33
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.3
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.25
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.03
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.95
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.92
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.84
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.8
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.76
KOG2231|consensus	669		97.72
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.63
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.53
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.37
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.31
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.06
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.06
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.04
KOG2231|consensus	669		96.97
smart00355	26	ZnF_C2H2 zinc finger.	96.97
smart00355	26	ZnF_C2H2 zinc finger.	96.93
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.74
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.67
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.63
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.63
KOG2482|consensus	423		96.61
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.53
PRK04860	160	hypothetical protein; Provisional	96.47
KOG1146|consensus	1406		96.46
KOG2482|consensus	423		96.41
KOG4173|consensus	253		95.96
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.93
KOG1146|consensus	1406		95.84
KOG2785|consensus	390		95.8
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.66
PRK04860	160	hypothetical protein; Provisional	95.59
KOG4173|consensus	253		95.02
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.81
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.8
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.98
KOG2893|consensus	341		93.7
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.6
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.42
KOG2893|consensus	341		92.85
KOG2785|consensus	390		92.46
COG4049	65	Uncharacterized protein containing archaeal-type C	92.39
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	91.9
COG5048	467	FOG: Zn-finger [General function prediction only]	91.69
COG4049	65	Uncharacterized protein containing archaeal-type C	91.42
KOG2186|consensus	276		90.65
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	90.3
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	89.73
COG5048	467	FOG: Zn-finger [General function prediction only]	89.27
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.74
KOG2186|consensus	276		86.6
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	84.87
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	84.62
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	84.1
PF12907	40	zf-met2: Zinc-binding	84.07
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	83.92
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	83.38
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	82.42
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	81.51
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	81.48
smart00531	147	TFIIE Transcription initiation factor IIE.	81.42
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	81.29

>KOG2462|consensus

Probab=99.96  E-value=4.9e-29  Score=197.65  Aligned_cols=141  Identities=23%  Similarity=0.401  Sum_probs=129.0

Q ss_pred             cccccCCCccccCChhHHHHHHhHhcCC--CCccccccccccccCChHHHHHHHHHhcCCCCccCchhhccCCHHHHHHH
Q psy7463         121 IKLQCNLCADTFCPRSNMLRHYLLKHRG--DKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIH  198 (319)
Q Consensus       121 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~--~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H  198 (319)
                      .+|+|+.||+.+.+.++|.+|. .+|..  ++..+.|++|++.|.+...|+.|+++|+ -+++|.+|||.|...+.|+.|
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHk-Q~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~-l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHK-QTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT-LPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             Cceeccccccccccccccchhh-cccccccccccccCCCCCceeeehHHHhhHhhccC-CCcccccccccccchHHhhcc
Confidence            3499999999999999999998 77853  3445899999999999999999999987 579999999999999999999


Q ss_pred             HHhcCCC-cccccccccccCChHHHHHHHHhhccccccccccchhhhhhhhhhHHHHHhcCCCCCCC
Q psy7463         199 MNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAKVGEGNQGKE  264 (319)
Q Consensus       199 ~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~  264 (319)
                      +|+|+|+ ||.|+.|++.|..+++|+.||+ .|++.+.|.|..|+|.|..++-|.+|..+.-.....
T Consensus       207 iRTHTGEKPF~C~hC~kAFADRSNLRAHmQ-THS~~K~~qC~~C~KsFsl~SyLnKH~ES~C~~~~~  272 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPHCGKAFADRSNLRAHMQ-THSDVKKHQCPRCGKSFALKSYLNKHSESACLKYLA  272 (279)
T ss_pred             cccccCCCCccCCcccchhcchHHHHHHHH-hhcCCccccCcchhhHHHHHHHHHHhhhhccccccc
Confidence            9999998 8999999999999999999999 999999999999999999999999998875554443

>KOG1074|consensus

Probab=99.95  E-value=7.3e-30  Score=228.23  Aligned_cols=139  Identities=23%  Similarity=0.418  Sum_probs=127.8

Q ss_pred             ccccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-----CCCCccC---chhhccCCHH
Q psy7463         122 KLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-----RIAYQCN---VCDKKYSRLS  193 (319)
Q Consensus       122 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-----~~~~~C~---~C~~~f~~~~  193 (319)
                      +-+|-+|.++..-.++|+.|. ++|+||+| |+|.+||++|.++.+|+.|+.+|.     ...+.|+   +|.+.|.+.-
T Consensus       605 PNqCiiC~rVlSC~saLqmHy-rtHtGERP-FkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHY-RTHTGERP-FKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             ccceeeeeecccchhhhhhhh-hcccCcCc-cccccccchhccccchhhcccccccCccccccccCCchhhhcccccccc
Confidence            478999999999999999999 99999999 999999999999999999999996     3468999   9999999999


Q ss_pred             HHHHHHHhcC----------------------------------------------------------------------
Q psy7463         194 DYKIHMNMHN----------------------------------------------------------------------  203 (319)
Q Consensus       194 ~l~~H~~~h~----------------------------------------------------------------------  203 (319)
                      .|..|+++|.                                                                      
T Consensus       683 ~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~  762 (958)
T KOG1074|consen  683 TLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENS  762 (958)
T ss_pred             cccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccc
Confidence            9999999985                                                                      


Q ss_pred             --------------------------------------------------------------------------------
Q psy7463         204 --------------------------------------------------------------------------------  203 (319)
Q Consensus       204 --------------------------------------------------------------------------------  203 (319)
                                                                                                      
T Consensus       763 ~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~  842 (958)
T KOG1074|consen  763 CGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLA  842 (958)
T ss_pred             cccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------CC------cccccccccccCChHHHHHHHHhhccccccccccchhhhhhhhh
Q psy7463         204 ----------------------------GF------KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKI  249 (319)
Q Consensus       204 ----------------------------~~------~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~~c~~~~~~~~  249 (319)
                                                  +.      +..|.+|++.|.+.+.|..|++ .|+++++|.|.+|+++|..+.
T Consensus       843 t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~r-THtg~KPF~C~fC~~aFttrg  921 (958)
T KOG1074|consen  843 TKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMR-THTGPKPFFCHFCEEAFTTRG  921 (958)
T ss_pred             cccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhh-cCCCCCCccchhhhhhhhhhh
Confidence                                        11      2789999999999999999999 999999999999999999999


Q ss_pred             hHHHHHhcCCCCCC
Q psy7463         250 GEIEAKVGEGNQGK  263 (319)
Q Consensus       250 ~~~~~~~~~~~~~~  263 (319)
                      .|..|+..+.+...
T Consensus       922 nLKvHMgtH~w~q~  935 (958)
T KOG1074|consen  922 NLKVHMGTHMWVQP  935 (958)
T ss_pred             hhhhhhccccccCC
Confidence            99999998777643

>KOG3608|consensus

Probab=99.95  E-value=6.7e-28  Score=196.03  Aligned_cols=205  Identities=24%  Similarity=0.520  Sum_probs=181.9

Q ss_pred             ccccccc--chhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhcc----CCccccccchhhhh-HHHHH
Q psy7463          13 VPQKCPL--CERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHE----GGIICRLCGEKFEK-SLMRD   85 (319)
Q Consensus        13 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----~~~~C~~C~~~f~~-~~l~~   85 (319)
                      ..+.|.+  |-+.+.+++.|++|++.|++++...|+.|+..|.++..|..|++..+    +.|+|..|.+.|.+ ..|..
T Consensus       176 pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~  255 (467)
T KOG3608|consen  176 PVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKS  255 (467)
T ss_pred             ceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHH
Confidence            3467765  99999999999999999999999999999999999999999988654    34999999999999 89999


Q ss_pred             HHhhcCCCCCCCCcCccccchhhhHHHHHHhhhCCcccccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCCh
Q psy7463          86 HLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLL  165 (319)
Q Consensus        86 H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~  165 (319)
                      |+..|..                             -|+|+.|+.+....++|..|++..|..++| |+|+.|++.|.+.
T Consensus       256 Hv~rHvn-----------------------------~ykCplCdmtc~~~ssL~~H~r~rHs~dkp-fKCd~Cd~~c~~e  305 (467)
T KOG3608|consen  256 HVVRHVN-----------------------------CYKCPLCDMTCSSASSLTTHIRYRHSKDKP-FKCDECDTRCVRE  305 (467)
T ss_pred             HHHHhhh-----------------------------cccccccccCCCChHHHHHHHHhhhccCCC-ccccchhhhhccH
Confidence            9998842                             389999999999999999999999999999 9999999999999


Q ss_pred             HHHHHHHHHhcCCCCccCc--hhhccCCHHHHHHHHHhcC-CC---cccccccccccCChHHHHHHHHhhcccccc----
Q psy7463         166 QNLKRHLAIHERIAYQCNV--CDKKYSRLSDYKIHMNMHN-GF---KYQCHICLKCTSRKNYLKRHIIMMHTKFEG----  235 (319)
Q Consensus       166 ~~L~~H~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~~---~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~----  235 (319)
                      +.|.+|..+|.+..|.|+.  |..+|.+...|+.|++.++ |.   +|.|..|++.|++-.+|..|+...|.-..|    
T Consensus       306 sdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~PsGh~  385 (467)
T KOG3608|consen  306 SDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPSGHK  385 (467)
T ss_pred             HHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCCCCCC
Confidence            9999999999988999999  9999999999999999876 43   599999999999999999999989965433    


Q ss_pred             -ccccchhhhhhh
Q psy7463         236 -QIGEMEDKVGEK  247 (319)
Q Consensus       236 -~~c~~c~~~~~~  247 (319)
                       |.=..|.-+|.+
T Consensus       386 RFtYk~~edG~mR  398 (467)
T KOG3608|consen  386 RFTYKVDEDGFMR  398 (467)
T ss_pred             ceeeeeccCceee
Confidence             444444444433

>KOG2462|consensus

Probab=99.95  E-value=1.1e-28  Score=195.71  Aligned_cols=101  Identities=28%  Similarity=0.551  Sum_probs=58.0

Q ss_pred             cccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHh
Q psy7463         123 LQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNM  201 (319)
Q Consensus       123 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~  201 (319)
                      +.|+.|++.|.+-.+|..|+ ++|+-  + ++|.+||+.|....-|+.|+|+|+ +|||.|+.|+++|..+++|+.||++
T Consensus       162 ~~C~~C~K~YvSmpALkMHi-rTH~l--~-c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQT  237 (279)
T KOG2462|consen  162 FSCKYCGKVYVSMPALKMHI-RTHTL--P-CECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQT  237 (279)
T ss_pred             ccCCCCCceeeehHHHhhHh-hccCC--C-cccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHh
Confidence            45555555555555555555 44542  2 555555555555555556666555 5566666666666666666666666


Q ss_pred             cCCC-cccccccccccCChHHHHHHHH
Q psy7463         202 HNGF-KYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       202 h~~~-~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      |.+. +|+|..|+|+|...+-|.+|..
T Consensus       238 HS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  238 HSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             hcCCccccCcchhhHHHHHHHHHHhhh
Confidence            5554 4666666666666666665554

>KOG3608|consensus

Probab=99.94  E-value=8.1e-27  Score=189.75  Aligned_cols=219  Identities=23%  Similarity=0.433  Sum_probs=189.5

Q ss_pred             cccccc--cchhccccHHHHHHHHHHhcC------------CCc-ccc--ccchhhccCHHHHHHHHHhccCC--ccccc
Q psy7463          13 VPQKCP--LCERLYKSVYRMKEHMKKQHK------------GQL-YEC--DCCTEYFIDRIAYEEHVRLHEGG--IICRL   73 (319)
Q Consensus        13 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~------------~~~-~~C--~~C~~~f~~~~~l~~H~~~h~~~--~~C~~   73 (319)
                      .-|.|.  .|+..|.+...|..|+..|..            ++| +.|  ..|.+.|.++..|++|+++|.++  ..|+.
T Consensus       133 ~~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~  212 (467)
T KOG3608|consen  133 QNFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPH  212 (467)
T ss_pred             hhhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecch
Confidence            457775  499999999999999988852            222 556  45999999999999999999998  88999


Q ss_pred             cchhhhh-HHHHHHHhhcCCCCCCCCcCccccchhhhHHHHHHhhhCCcccccCCCccccCChhHHHHHHhHhcCCCCcc
Q psy7463          74 CGEKFEK-SLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVF  152 (319)
Q Consensus        74 C~~~f~~-~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  152 (319)
                      ||.-|++ ..|-.|++..+.-.                         ..+|+|..|.+.|.++..|..|+ +.|-.-   
T Consensus       213 Cg~~F~~~tkl~DH~rRqt~l~-------------------------~n~fqC~~C~KrFaTeklL~~Hv-~rHvn~---  263 (467)
T KOG3608|consen  213 CGELFRTKTKLFDHLRRQTELN-------------------------TNSFQCAQCFKRFATEKLLKSHV-VRHVNC---  263 (467)
T ss_pred             HHHHhccccHHHHHHHhhhhhc-------------------------CCchHHHHHHHHHhHHHHHHHHH-HHhhhc---
Confidence            9999998 88888877654211                         11599999999999999999998 667654   


Q ss_pred             ccccccccccCChHHHHHHHHHhc--CCCCccCchhhccCCHHHHHHHHHhcCCCcccccc--cccccCChHHHHHHHHh
Q psy7463         153 YACDRCDKRFSLLQNLKRHLAIHE--RIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHI--CLKCTSRKNYLKRHIIM  228 (319)
Q Consensus       153 ~~C~~C~~~f~~~~~L~~H~~~h~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~--C~~~f~~~~~L~~H~~~  228 (319)
                      |+|+.|+.+....+.|..|++.-+  .+||+|+.|++.|.+.+.|.+|..+|....|+|..  |.+.|.+..+|++|++.
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~e  343 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLE  343 (467)
T ss_pred             ccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHH
Confidence            999999999999999999999655  89999999999999999999999999976799999  99999999999999998


Q ss_pred             hccc--cccccccchhhhhhhhhhHHHHHhcCCC
Q psy7463         229 MHTK--FEGQIGEMEDKVGEKKIGEIEAKVGEGN  260 (319)
Q Consensus       229 ~H~~--~~~~~c~~c~~~~~~~~~~~~~~~~~~~  260 (319)
                      +|-+  ..+|.|-.|++.|++-.+|..|......
T Consensus       344 vhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  344 VHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             hccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence            8855  4579999999999999999988665433

>KOG3623|consensus

Probab=99.87  E-value=4e-22  Score=176.25  Aligned_cols=77  Identities=26%  Similarity=0.335  Sum_probs=70.6

Q ss_pred             CccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccccchhhhhhhhhhHHHHHhc
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAKVG  257 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~~c~~~~~~~~~~~~~~~~  257 (319)
                      |.|+.|+|.|...+.|.+|.-.|+|. ||+|.+|.|.|..+..|..|.+ .|+|++||.|..|+|.|........|+.-
T Consensus       895 yaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkR-LHSGEKPfQCdKClKRFSHSGSYSQHMNH  972 (1007)
T KOG3623|consen  895 YACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKR-LHSGEKPFQCDKCLKRFSHSGSYSQHMNH  972 (1007)
T ss_pred             chHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhh-hccCCCcchhhhhhhhcccccchHhhhcc
Confidence            89999999999999999999999997 8999999999999999999998 99999999999999999998888888654

>KOG1074|consensus

Probab=99.86  E-value=1.4e-22  Score=181.94  Aligned_cols=207  Identities=21%  Similarity=0.430  Sum_probs=149.0

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC------cccc---ccchhhhh-H
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG------IICR---LCGEKFEK-S   81 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~------~~C~---~C~~~f~~-~   81 (319)
                      ..|-+|-+|-++....+.|+.|+++|+||+||+|.+|++.|.++.+|+.||-.|...      +.|+   +|.+.|.. .
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccc
Confidence            458899999999999999999999999999999999999999999999999999653      8999   99999998 8


Q ss_pred             HHHHHHhhcCCCCC-CCCcCccccchhhhHHHHHHhhhCCcccccCCCccccCChhHHHHHHhHhcC-------------
Q psy7463          82 LMRDHLVTHIPPEH-RGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHR-------------  147 (319)
Q Consensus        82 ~l~~H~~~h~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~-------------  147 (319)
                      .|..|++.|.+... ......               ......-+|..|.+.|.....+..++ ..|.             
T Consensus       683 ~lpQhIriH~~~~~s~g~~a~---------------e~~~~adq~~~~qk~~~~a~~f~~~~-se~~~~~s~~~~~~~~~  746 (958)
T KOG1074|consen  683 TLPQHIRIHLGGQISNGGTAA---------------EGILAADQCSSCQKTFSDARSFSQQI-SEQPSPESEPDEQMDER  746 (958)
T ss_pred             cccceEEeecCCCCCCCcccc---------------cccchhcccchhhhcccccccchhhh-hccCCcccCCccccccc
Confidence            89999999985221 110000               00001134555555555555555544 2231             


Q ss_pred             ---CCC---ccccccccccccCChHHHHHHHHHhc---------------------------------------------
Q psy7463         148 ---GDK---VFYACDRCDKRFSLLQNLKRHLAIHE---------------------------------------------  176 (319)
Q Consensus       148 ---~~~---~~~~C~~C~~~f~~~~~L~~H~~~h~---------------------------------------------  176 (319)
                         ++.   +...+..|+..+.....+..+-..+.                                             
T Consensus       747 t~t~~~~~tp~~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~  826 (958)
T KOG1074|consen  747 TETEELDVTPPPPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMD  826 (958)
T ss_pred             ccccccccCCCccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccC
Confidence               101   11344445554444433333221110                                             


Q ss_pred             --------------------------------------------------CCCCccCchhhccCCHHHHHHHHHhcCCC-
Q psy7463         177 --------------------------------------------------RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-  205 (319)
Q Consensus       177 --------------------------------------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-  205 (319)
                                                                        .....|.+||+.|...+.|..|+++|++. 
T Consensus       827 pvl~~~~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~K  906 (958)
T KOG1074|consen  827 PVLWNQETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPK  906 (958)
T ss_pred             chhhcccccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCC
Confidence                                                              00177999999999999999999999997 


Q ss_pred             cccccccccccCChHHHHHHHHhhcccccc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHTKFEG  235 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  235 (319)
                      ||.|.+|++.|..+.+|+.||. .|....+
T Consensus       907 PF~C~fC~~aFttrgnLKvHMg-tH~w~q~  935 (958)
T KOG1074|consen  907 PFFCHFCEEAFTTRGNLKVHMG-THMWVQP  935 (958)
T ss_pred             Cccchhhhhhhhhhhhhhhhhc-cccccCC
Confidence            7999999999999999999999 6655443

>KOG3623|consensus

Probab=99.85  E-value=4.4e-22  Score=176.01  Aligned_cols=75  Identities=36%  Similarity=0.711  Sum_probs=73.2

Q ss_pred             ccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHH
Q psy7463         153 YACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       153 ~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      |.|++|++.|...+.|.+|.--|+ .+||+|.+|.|+|+.+..|..|+|.|.|+ ||+|..|+|+|+..+.+..||.
T Consensus       895 yaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  895 YACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             chHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            999999999999999999999998 88999999999999999999999999998 7999999999999999999987

>KOG3576|consensus

Probab=99.69  E-value=5.9e-18  Score=128.05  Aligned_cols=109  Identities=26%  Similarity=0.513  Sum_probs=82.8

Q ss_pred             ccccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHH
Q psy7463         122 KLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMN  200 (319)
Q Consensus       122 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~  200 (319)
                      .|.|.+|++.|.-...|.+|+ ..|...+. |.|..||+.|..--.|++|+|+|+ -+||+|..|+++|.++-.|..|++
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~-kch~~vkr-~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHL-KCHSDVKR-HLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHh-hhccHHHH-HHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            478888888887777778887 77777776 778888888888888888888887 668888888888888888888876


Q ss_pred             hcCCC------------cccccccccccCChHHHHHHHHhhccc
Q psy7463         201 MHNGF------------KYQCHICLKCTSRKNYLKRHIIMMHTK  232 (319)
Q Consensus       201 ~h~~~------------~~~C~~C~~~f~~~~~L~~H~~~~H~~  232 (319)
                      .-+|.            -|.|..||.+-.....+..|++.+|..
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            54432            177888888877777888888766654

>KOG3576|consensus

Probab=99.66  E-value=4.7e-17  Score=123.20  Aligned_cols=109  Identities=25%  Similarity=0.394  Sum_probs=100.0

Q ss_pred             ccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHHhhc
Q psy7463         153 YACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMH  230 (319)
Q Consensus       153 ~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H  230 (319)
                      |.|.+|++.|.....|.+|++-|. -+.|-|..||+.|..-..|++|+++|+|. ||+|..|++.|+.+..|..|++.+|
T Consensus       118 ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvh  197 (267)
T KOG3576|consen  118 FTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVH  197 (267)
T ss_pred             eeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHc
Confidence            899999999999999999999998 77899999999999999999999999997 8999999999999999999999999


Q ss_pred             cc----------cccccccchhhhhhhhhhHHHHHhcCCCC
Q psy7463         231 TK----------FEGQIGEMEDKVGEKKIGEIEAKVGEGNQ  261 (319)
Q Consensus       231 ~~----------~~~~~c~~c~~~~~~~~~~~~~~~~~~~~  261 (319)
                      +.          .+.|.|+.|+...........|.......
T Consensus       198 gv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  198 GVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             CchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            65          45699999999988888888887765544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.42  E-value=8.2e-13  Score=118.42  Aligned_cols=146  Identities=16%  Similarity=0.292  Sum_probs=110.2

Q ss_pred             ccccccchhhhhHHHHHHHhhcCCCCCCCCc--CccccchhhhHHHHHHhhhCCcccccCCCccccCChhHHHHHHhHhc
Q psy7463          69 IICRLCGEKFEKSLMRDHLVTHIPPEHRGKV--SDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKH  146 (319)
Q Consensus        69 ~~C~~C~~~f~~~~l~~H~~~h~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  146 (319)
                      ..|+.|........|..|..........|+.  |+..+...          .....+.|+.|++.|. ...|..|+.. |
T Consensus       408 V~C~NC~~~i~l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~----------el~~H~~C~~Cgk~f~-~s~LekH~~~-~  475 (567)
T PLN03086        408 VECRNCKHYIPSRSIALHEAYCSRHNVVCPHDGCGIVLRVE----------EAKNHVHCEKCGQAFQ-QGEMEKHMKV-F  475 (567)
T ss_pred             EECCCCCCccchhHHHHHHhhCCCcceeCCcccccceeecc----------ccccCccCCCCCCccc-hHHHHHHHHh-c
Confidence            5788888888777777888777666666763  66665433          1122378999999985 6789999844 4


Q ss_pred             CCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccC----------CHHHHHHHHHhcCCCcccccccccc
Q psy7463         147 RGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYS----------RLSDYKIHMNMHNGFKYQCHICLKC  215 (319)
Q Consensus       147 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~C~~C~~~  215 (319)
                      .  .+ +.|+ |++.+ .+..|..|+.+|. .+++.|++|++.|.          ..+.|..|..++...++.|..|++.
T Consensus       476 H--kp-v~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~  550 (567)
T PLN03086        476 H--EP-LQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRS  550 (567)
T ss_pred             C--CC-ccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCe
Confidence            3  45 8999 99755 6688999998887 88999999999885          2458999999986668999999988


Q ss_pred             cCChHHHHHHHHhhccc
Q psy7463         216 TSRKNYLKRHIIMMHTK  232 (319)
Q Consensus       216 f~~~~~L~~H~~~~H~~  232 (319)
                      |.. ..|..|+..+|..
T Consensus       551 Vrl-rdm~~H~~~~h~~  566 (567)
T PLN03086        551 VML-KEMDIHQIAVHQK  566 (567)
T ss_pred             eee-hhHHHHHHHhhcC
Confidence            755 4688888877753

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.24  E-value=1.9e-11  Score=109.77  Aligned_cols=146  Identities=19%  Similarity=0.386  Sum_probs=108.9

Q ss_pred             ccccccchhccccHHHHHHHHHHhcCCCcccccc--chhhccCHHHHHHHHHhccCCccccccchhhhhHHHHHHHhhcC
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC--CTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHLVTHI   91 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~l~~H~~~h~   91 (319)
                      .-.|+.|...... ..|..|..... ...-.|+.  |+..|. +..+..|       +.|+.|++.|....|..|+..++
T Consensus       407 ~V~C~NC~~~i~l-~~l~lHe~~C~-r~~V~Cp~~~Cg~v~~-r~el~~H-------~~C~~Cgk~f~~s~LekH~~~~H  476 (567)
T PLN03086        407 TVECRNCKHYIPS-RSIALHEAYCS-RHNVVCPHDGCGIVLR-VEEAKNH-------VHCEKCGQAFQQGEMEKHMKVFH  476 (567)
T ss_pred             eEECCCCCCccch-hHHHHHHhhCC-CcceeCCcccccceee-ccccccC-------ccCCCCCCccchHHHHHHHHhcC
Confidence            3468888877663 45667775442 34456764  888773 3444444       47888888886666777877753


Q ss_pred             CCCCCCCcCccccchhhhHHHHHHhhhCCcccccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCC-------
Q psy7463          92 PPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSL-------  164 (319)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~-------  164 (319)
                                                   .++.|+ ||+.+ .+..|..|+ ..|.++++ +.|+.|++.|..       
T Consensus       477 -----------------------------kpv~Cp-Cg~~~-~R~~L~~H~-~thCp~Kp-i~C~fC~~~v~~g~~~~d~  523 (567)
T PLN03086        477 -----------------------------EPLQCP-CGVVL-EKEQMVQHQ-ASTCPLRL-ITCRFCGDMVQAGGSAMDV  523 (567)
T ss_pred             -----------------------------CCccCC-CCCCc-chhHHHhhh-hccCCCCc-eeCCCCCCccccCccccch
Confidence                                         258999 99765 678999998 77999999 999999999852       


Q ss_pred             ---hHHHHHHHHHhcCCCCccCchhhccCCHHHHHHHHHhcC
Q psy7463         165 ---LQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       165 ---~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~  203 (319)
                         ...|..|..+...+++.|..||+.+..+ .|..|+..-|
T Consensus       524 ~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        524 RDRLRGMSEHESICGSRTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             hhhhhhHHHHHHhcCCcceEccccCCeeeeh-hHHHHHHHhh
Confidence               3589999999889999999999999876 5888876544

>PHA00733 hypothetical protein

Probab=99.23  E-value=1.8e-11  Score=89.84  Aligned_cols=78  Identities=18%  Similarity=0.225  Sum_probs=62.7

Q ss_pred             ccccccccccCChHHHHHH------HHHhcCCCCccCchhhccCCHHHHHHHHHhcCCCcccccccccccCChHHHHHHH
Q psy7463         153 YACDRCDKRFSLLQNLKRH------LAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHI  226 (319)
Q Consensus       153 ~~C~~C~~~f~~~~~L~~H------~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~  226 (319)
                      +.|.+|...|.....|..+      +..+..+||.|+.||+.|.+...|..|++.| ..+|.|+.|++.|.....|..|+
T Consensus        41 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~F~~~~sL~~H~  119 (128)
T PHA00733         41 LIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKEFRNTDSTLDHV  119 (128)
T ss_pred             HHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCccCCHHHHHHHH
Confidence            7888888877777666655      2333477899999999999999999999876 34799999999999999999998


Q ss_pred             Hhhcc
Q psy7463         227 IMMHT  231 (319)
Q Consensus       227 ~~~H~  231 (319)
                      ...|.
T Consensus       120 ~~~h~  124 (128)
T PHA00733        120 CKKHN  124 (128)
T ss_pred             HHhcC
Confidence            87664

>PHA00733 hypothetical protein

Probab=99.12  E-value=6.4e-11  Score=86.95  Aligned_cols=86  Identities=19%  Similarity=0.281  Sum_probs=70.4

Q ss_pred             hhCCcccccCCCccccCChhHHHHH--H--hHhcCCCCccccccccccccCChHHHHHHHHHhcCCCCccCchhhccCCH
Q psy7463         117 KRNGIKLQCNLCADTFCPRSNMLRH--Y--LLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRL  192 (319)
Q Consensus       117 ~~~~~~~~C~~C~~~f~~~~~l~~H--~--~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~  192 (319)
                      .....++.|.+|...|.....|..+  +  ...+.++.+ |.|+.|++.|.+...|..|++.| ..+|.|+.|++.|...
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kP-y~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~F~~~  112 (128)
T PHA00733         35 TPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSP-YVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKEFRNT  112 (128)
T ss_pred             ChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCC-ccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCccCCH
Confidence            3344569999999998887777665  1  123344667 99999999999999999999976 4579999999999999


Q ss_pred             HHHHHHHHhcCC
Q psy7463         193 SDYKIHMNMHNG  204 (319)
Q Consensus       193 ~~l~~H~~~h~~  204 (319)
                      ..|..|+...++
T Consensus       113 ~sL~~H~~~~h~  124 (128)
T PHA00733        113 DSTLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHHHhcC
Confidence            999999998776

>KOG3993|consensus

Probab=99.06  E-value=2.2e-11  Score=102.66  Aligned_cols=84  Identities=26%  Similarity=0.564  Sum_probs=72.1

Q ss_pred             CCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhcc-----------------------
Q psy7463          10 DKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHE-----------------------   66 (319)
Q Consensus        10 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------------------   66 (319)
                      ....-|.|..|...|.....|.+|.-.---...|+|+.|+++|....+|..|.++|.                       
T Consensus       263 n~iGdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~  342 (500)
T KOG3993|consen  263 NVIGDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEV  342 (500)
T ss_pred             ccHHHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhh
Confidence            345579999999999999999999765444456999999999999999999999993                       


Q ss_pred             ------------CCccccccchhhhh-HHHHHHHhhcCCC
Q psy7463          67 ------------GGIICRLCGEKFEK-SLMRDHLVTHIPP   93 (319)
Q Consensus        67 ------------~~~~C~~C~~~f~~-~~l~~H~~~h~~~   93 (319)
                                  +-|.|..|++.|++ ..|+.|+.+|...
T Consensus       343 ~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  343 QEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             hhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhcc
Confidence                        11789999999999 8999999988763

>KOG3993|consensus

Probab=99.00  E-value=4.3e-11  Score=100.92  Aligned_cols=191  Identities=16%  Similarity=0.156  Sum_probs=117.8

Q ss_pred             cccccchhhccCHHHHHHHH--HhccCCccccccchhhhh-HHHHHHHhhcCCCCCCCCcCc---cccchhhhHHHHHHh
Q psy7463          43 YECDCCTEYFIDRIAYEEHV--RLHEGGIICRLCGEKFEK-SLMRDHLVTHIPPEHRGKVSD---AFFNKKQTALLTHYL  116 (319)
Q Consensus        43 ~~C~~C~~~f~~~~~l~~H~--~~h~~~~~C~~C~~~f~~-~~l~~H~~~h~~~~~~~~~~~---~~~~~~~~~~~~~~~  116 (319)
                      |.|.+|...|.+...|.+|.  ++-+-+|.|++|++.|.- .+|..|.+.|-.........+   +..............
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            99999999999999999995  455677999999999998 999999999976332221100   000000001111110


Q ss_pred             h---hCCcccccCCCccccCChhHHHHHHhHhcCCCCcc---------------ccccccccccCChHHHHHHHHHhc--
Q psy7463         117 K---RNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVF---------------YACDRCDKRFSLLQNLKRHLAIHE--  176 (319)
Q Consensus       117 ~---~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~---------------~~C~~C~~~f~~~~~L~~H~~~h~--  176 (319)
                      .   ....-|.|..|++.|.+...|+.|+...|......               +-|+.|.-.+.....--.+...+.  
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~s  427 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGS  427 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeecc
Confidence            0   11123999999999999999999985544332211               223333333322221111111111  


Q ss_pred             CCCCccCchhhccCCHHHHHHHHHhcC-CCcccccccccccCChHHHHHHHHhhcccc
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHMNMHN-GFKYQCHICLKCTSRKNYLKRHIIMMHTKF  233 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  233 (319)
                      ..-..|++||..+.++..--.+.+.-. ...|.|.+|..+|.+...|.+|+...|..+
T Consensus       428 ael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  428 AELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             ccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHH
Confidence            123457788877776654444443322 225999999999999999999998777654

>PHA02768 hypothetical protein; Provisional

Probab=98.99  E-value=2e-10  Score=69.14  Aligned_cols=40  Identities=23%  Similarity=0.557  Sum_probs=17.7

Q ss_pred             CccCchhhccCCHHHHHHHHHhcCCCcccccccccccCChH
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKN  220 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~  220 (319)
                      |.|+.||+.|...+.|..|+++|+ .+|+|..|++.|...+
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s   45 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTG   45 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceecccc
Confidence            344444444444444444444444 2444444444444333

>PHA02768 hypothetical protein; Provisional

Probab=98.94  E-value=3e-10  Score=68.42  Aligned_cols=44  Identities=20%  Similarity=0.464  Sum_probs=37.8

Q ss_pred             ccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHH
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYE   59 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   59 (319)
                      .|.|+.||+.|...+.|..|+++|+  ++|+|..|++.|.....|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999999999999999999988  6899999999988766553

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.67  E-value=1.2e-08  Score=52.46  Aligned_cols=26  Identities=23%  Similarity=0.691  Sum_probs=23.6

Q ss_pred             HHHHHHHHhcCCCccccccchhhccC
Q psy7463          29 RMKEHMKKQHKGQLYECDCCTEYFID   54 (319)
Q Consensus        29 ~l~~H~~~h~~~~~~~C~~C~~~f~~   54 (319)
                      +|.+|+++|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            48899999999999999999999863

...

>PHA00616 hypothetical protein

Probab=98.55  E-value=3.2e-08  Score=56.66  Aligned_cols=39  Identities=21%  Similarity=0.399  Sum_probs=35.1

Q ss_pred             ccccccchhccccHHHHHHHHHHhcCCCccccccchhhc
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYF   52 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   52 (319)
                      ||+|+.||+.|...+.|..|++.|++++++.|+.-...|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~f   39 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIYF   39 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEEE
Confidence            699999999999999999999999999999988655544

>PHA00732 hypothetical protein

Probab=98.45  E-value=1.2e-07  Score=62.95  Aligned_cols=46  Identities=28%  Similarity=0.540  Sum_probs=23.0

Q ss_pred             ccccccccccCChHHHHHHHHH-hcCCCCccCchhhccCCHHHHHHHHHhcC
Q psy7463         153 YACDRCDKRFSLLQNLKRHLAI-HERIAYQCNVCDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       153 ~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~C~~C~~~f~~~~~l~~H~~~h~  203 (319)
                      |.|+.|++.|.+...|+.|++. |.  ++.|+.||+.|.   .|..|+.++.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~--~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT--LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC--CCccCCCCCEeC---ChhhhhcccC
Confidence            4555555555555555555543 22  234555555554   3455554433

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.40  E-value=1.4e-07  Score=48.46  Aligned_cols=9  Identities=44%  Similarity=1.087  Sum_probs=3.3

Q ss_pred             ccccccccc
Q psy7463         207 YQCHICLKC  215 (319)
Q Consensus       207 ~~C~~C~~~  215 (319)
                      |.|++|++.
T Consensus        15 ~~C~~C~k~   23 (26)
T PF13465_consen   15 YKCPYCGKS   23 (26)
T ss_dssp             EEESSSSEE
T ss_pred             CCCCCCcCe
Confidence            333333333

...

>PHA00616 hypothetical protein

Probab=98.37  E-value=2e-07  Score=53.39  Aligned_cols=32  Identities=19%  Similarity=0.305  Sum_probs=16.4

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCCC-ccccc
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCH  210 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  210 (319)
                      ||+|+.||+.|.+++.|..|++.|+|. ++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            345555555555555555555555544 34443

>PHA00732 hypothetical protein

Probab=98.33  E-value=2.8e-07  Score=61.25  Aligned_cols=49  Identities=20%  Similarity=0.519  Sum_probs=39.4

Q ss_pred             ccccccchhccccHHHHHHHHHH-hcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKK-QHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      ||.|+.|++.|.+...|+.|++. |.   ++.|+.|++.|.   .|..|+.+....
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~~   50 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYDI   50 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCCc
Confidence            58899999999999999999885 54   368999999997   588888766554

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.30  E-value=1.2e-06  Score=54.06  Aligned_cols=50  Identities=28%  Similarity=0.555  Sum_probs=31.0

Q ss_pred             cccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHh
Q psy7463         123 LQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH  175 (319)
Q Consensus       123 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h  175 (319)
                      |.|+.|++ ..+...|..|+...|..+...+.||+|...+.  .+|..|+..+
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            66777777 34566777777666766544466777766433  3666666543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.25  E-value=1.7e-06  Score=53.42  Aligned_cols=48  Identities=25%  Similarity=0.400  Sum_probs=25.8

Q ss_pred             CccCchhhccCCHHHHHHHHHhcC-CC--cccccccccccCChHHHHHHHHhhc
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMHN-GF--KYQCHICLKCTSRKNYLKRHIIMMH  230 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h~-~~--~~~C~~C~~~f~~~~~L~~H~~~~H  230 (319)
                      |.|++|++ ..+...|..|....+ ..  .+.||+|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            55666666 334455666655432 22  366666665433  36666666544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.03  E-value=3.6e-06  Score=41.95  Aligned_cols=23  Identities=35%  Similarity=0.899  Sum_probs=15.8

Q ss_pred             cccccchhccccHHHHHHHHHHh
Q psy7463          15 QKCPLCERLYKSVYRMKEHMKKQ   37 (319)
Q Consensus        15 ~~C~~C~~~f~~~~~l~~H~~~h   37 (319)
                      |+|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777776653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.95  E-value=6.1e-06  Score=58.39  Aligned_cols=72  Identities=18%  Similarity=0.290  Sum_probs=17.3

Q ss_pred             ccccccccCChHHHHHHHHHhcCCCCccCchhhccCCHHHHHHHHHhcCCCcccccccccccCChHHHHHHHHhh
Q psy7463         155 CDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMM  229 (319)
Q Consensus       155 C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~  229 (319)
                      |..|+..|.+...|..|+...++....   ....+.....+..+++.-....+.|.+|++.|.+...|..|++..
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIP---DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             --------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccc---cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            666666666666666666543321111   111222333444444433333577777777777777777777744

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.92  E-value=6.3e-06  Score=41.05  Aligned_cols=21  Identities=52%  Similarity=0.866  Sum_probs=13.6

Q ss_pred             ccccccccccCChHHHHHHHH
Q psy7463         207 YQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      |+|+.|++.|.++..|..|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            456666666666666666665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.84  E-value=1.4e-05  Score=40.09  Aligned_cols=24  Identities=38%  Similarity=0.692  Sum_probs=13.7

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy7463         207 YQCHICLKCTSRKNYLKRHIIMMH  230 (319)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H~~~~H  230 (319)
                      |.|++|++.|.+...|+.|++..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666666443

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.80  E-value=1.2e-05  Score=56.93  Aligned_cols=73  Identities=23%  Similarity=0.414  Sum_probs=21.9

Q ss_pred             ccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhcCCCCccCchhhccCCHHHHHHHHHhc
Q psy7463         124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       124 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      +|..|+..|.+...|..|+...|.-..+      ....+.....+..+++.-....+.|.+|++.|.+...|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~------~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP------DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc------cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            5899999999999999999887864432      112222444455555433344799999999999999999999975

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.76  E-value=2.1e-05  Score=39.44  Aligned_cols=24  Identities=29%  Similarity=0.922  Sum_probs=14.9

Q ss_pred             cccccchhccccHHHHHHHHHHhc
Q psy7463          15 QKCPLCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        15 ~~C~~C~~~f~~~~~l~~H~~~h~   38 (319)
                      |.|++|++.|.+...|+.|+..|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777776653

...

>KOG2231|consensus

Probab=97.72  E-value=0.00011  Score=67.85  Aligned_cols=124  Identities=22%  Similarity=0.501  Sum_probs=69.5

Q ss_pred             cccchhhccCHHHHHHHHHhccCCccccccc----------hhhhhHHHHHHHhhcCCCCCCCCcCccccchhhhHHHHH
Q psy7463          45 CDCCTEYFIDRIAYEEHVRLHEGGIICRLCG----------EKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTH  114 (319)
Q Consensus        45 C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~----------~~f~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~  114 (319)
                      |..| -.|.+...|+.|+..-|..+.|.+|-          +.|....|..|++.--.       ++..+..        
T Consensus       118 ~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~-------d~~s~rG--------  181 (669)
T KOG2231|consen  118 CLHC-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDP-------DDESCRG--------  181 (669)
T ss_pred             Cccc-cchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHHHHHhcCCC-------ccccccC--------
Confidence            4444 44447778888887666666665553          34444556666554322       1111110        


Q ss_pred             HhhhCCcccccCCCccccCChhHHHHHHhHhcCCCCcccccccc------ccccCChHHHHHHHHHhcCCCCccC--chh
Q psy7463         115 YLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRC------DKRFSLLQNLKRHLAIHERIAYQCN--VCD  186 (319)
Q Consensus       115 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C------~~~f~~~~~L~~H~~~h~~~~~~C~--~C~  186 (319)
                             --.|..|...|.....|..|+...|      |.|..|      +.-|.....|..|.+.++   |.|+  .|.
T Consensus       182 -------hp~C~~C~~~fld~~el~rH~~~~h------~~chfC~~~~~~neyy~~~~dLe~HfR~~H---flCE~~~C~  245 (669)
T KOG2231|consen  182 -------HPLCKFCHERFLDDDELYRHLRFDH------EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH---FLCEEEFCR  245 (669)
T ss_pred             -------CccchhhhhhhccHHHHHHhhccce------eheeecCcccccchhcccchHHHHHhhhcC---ccccccccc
Confidence                   1467788888888888888875545      555555      344666777777777654   5566  453


Q ss_pred             -hccCCHHHHHHHHH
Q psy7463         187 -KKYSRLSDYKIHMN  200 (319)
Q Consensus       187 -~~f~~~~~l~~H~~  200 (319)
                       +.|.....+..+++
T Consensus       246 ~~~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  246 TKKFYVAFELEIELK  260 (669)
T ss_pred             cceeeehhHHHHHHH
Confidence             23333334444444

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.63  E-value=2.3e-05  Score=40.68  Aligned_cols=25  Identities=24%  Similarity=0.659  Sum_probs=15.3

Q ss_pred             ccccccchhccccHHHHHHHHHHhc
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~   38 (319)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666665553

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.53  E-value=4.2e-05  Score=39.70  Aligned_cols=20  Identities=30%  Similarity=0.554  Sum_probs=8.2

Q ss_pred             ccccccccccCChHHHHHHH
Q psy7463         207 YQCHICLKCTSRKNYLKRHI  226 (319)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H~  226 (319)
                      |+|..|++.|.+...|..|+
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~   21 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHK   21 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHH
T ss_pred             CCCCccCCccCChhHHHHHh
Confidence            33444444444444444443

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.37  E-value=4e-05  Score=63.11  Aligned_cols=51  Identities=35%  Similarity=0.579  Sum_probs=37.7

Q ss_pred             CCCCccCc--hhhccCCHHHHHHHHHhcC--------------------CCcccccccccccCChHHHHHHHH
Q psy7463         177 RIAYQCNV--CDKKYSRLSDYKIHMNMHN--------------------GFKYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       177 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~--------------------~~~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      ++||+|++  |.|.|++...|+-|+.--+                    .+||.|++|+|++.....|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            47788877  8888888888888875311                    236888888888888888887764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.31  E-value=5.3e-05  Score=62.42  Aligned_cols=51  Identities=37%  Similarity=0.803  Sum_probs=42.8

Q ss_pred             CCccccccc--cccccCChHHHHHHHHH-h-------------------cCCCCccCchhhccCCHHHHHHHHH
Q psy7463         149 DKVFYACDR--CDKRFSLLQNLKRHLAI-H-------------------ERIAYQCNVCDKKYSRLSDYKIHMN  200 (319)
Q Consensus       149 ~~~~~~C~~--C~~~f~~~~~L~~H~~~-h-------------------~~~~~~C~~C~~~f~~~~~l~~H~~  200 (319)
                      ++| |+|++  |++.+.+...|+.|+.- |                   ..|||.|++|+|+|++...|+-|+.
T Consensus       347 ~Kp-ykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKP-YKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             Cce-ecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            466 99987  99999999999999752 2                   1368999999999999999998864

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.06  E-value=0.0013  Score=55.02  Aligned_cols=136  Identities=15%  Similarity=0.151  Sum_probs=89.9

Q ss_pred             ccccCC--CccccCChhHHHHHHhHhcCCCCccccccccc---ccc------CChHHHHHHHHHhc-C----CCCccCch
Q psy7463         122 KLQCNL--CADTFCPRSNMLRHYLLKHRGDKVFYACDRCD---KRF------SLLQNLKRHLAIHE-R----IAYQCNVC  185 (319)
Q Consensus       122 ~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~---~~f------~~~~~L~~H~~~h~-~----~~~~C~~C  185 (319)
                      .|.|+.  |..+......|..|....|..    +.|.+|-   +.|      .++..|+.|...-. +    .--.|..|
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~----~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC  226 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF----VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFC  226 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc----EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhc
Confidence            378864  777777788999998776754    5677662   223      34566777754321 1    12369999


Q ss_pred             hhccCCHHHHHHHHHhcCCCccccccc----ccccCChHHHHHHHHhhccccccccccch-hhhhhhhhhHHHHHhcCCC
Q psy7463         186 DKKYSRLSDYKIHMNMHNGFKYQCHIC----LKCTSRKNYLKRHIIMMHTKFEGQIGEME-DKVGEKKIGEIEAKVGEGN  260 (319)
Q Consensus       186 ~~~f~~~~~l~~H~~~h~~~~~~C~~C----~~~f~~~~~L~~H~~~~H~~~~~~~c~~c-~~~~~~~~~~~~~~~~~~~  260 (319)
                      ...|-....|..|++..+..-|.|..=    ..-|.+..+|..|.+..|---.-..|-.- -..|....+|++|......
T Consensus       227 ~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy~ct~qtc~~~k~~vf~~~~el~~h~~~~h~  306 (493)
T COG5236         227 KIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAHYCCTFQTCRVGKCYVFPYHTELLEHLTRFHK  306 (493)
T ss_pred             cceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCceEEEEEEEecCcEEEeccHHHHHHHHHHHhh
Confidence            999999999999999877744444332    23488888999998866643222333322 2578888888888776544


Q ss_pred             C
Q psy7463         261 Q  261 (319)
Q Consensus       261 ~  261 (319)
                      .
T Consensus       307 ~  307 (493)
T COG5236         307 V  307 (493)
T ss_pred             c
Confidence            4

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.06  E-value=0.00078  Score=39.58  Aligned_cols=31  Identities=19%  Similarity=0.578  Sum_probs=18.2

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcCCCc
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHKGQL   42 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   42 (319)
                      +.|-.|++|+..+....+|++|+...|+.+|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            5567777777777777777777777666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.04  E-value=0.0005  Score=34.41  Aligned_cols=23  Identities=48%  Similarity=0.781  Sum_probs=15.5

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy7463         207 YQCHICLKCTSRKNYLKRHIIMMH  230 (319)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H~~~~H  230 (319)
                      |+|+.|++... ...|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            57778887776 777888877555

>KOG2231|consensus

Probab=96.97  E-value=0.0024  Score=59.25  Aligned_cols=130  Identities=28%  Similarity=0.638  Sum_probs=83.8

Q ss_pred             cccccchhcc---------------ccHHHHHHHHHHhcCCCccccccc---------hhhccCHHHHHHHHHhc-----
Q psy7463          15 QKCPLCERLY---------------KSVYRMKEHMKKQHKGQLYECDCC---------TEYFIDRIAYEEHVRLH-----   65 (319)
Q Consensus        15 ~~C~~C~~~f---------------~~~~~l~~H~~~h~~~~~~~C~~C---------~~~f~~~~~l~~H~~~h-----   65 (319)
                      +.|.+|++.|               .+...|+.|+...|+  .+.|.+|         .....++..|..|+..-     
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~  177 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDE  177 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhh--hhccccccccceeeeeeeehehHHHHHHHHhcCCCccc
Confidence            5666666655               478899999965553  3556555         23455778888887643     


Q ss_pred             --cCCccccccchhhhh-HHHHHHHhhcCCCCCCCCcCccccchhhhHHHHHHhhhCCcccccCCC------ccccCChh
Q psy7463          66 --EGGIICRLCGEKFEK-SLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLC------ADTFCPRS  136 (319)
Q Consensus        66 --~~~~~C~~C~~~f~~-~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C------~~~f~~~~  136 (319)
                        .|...|.+|...|-. ..|..|++.++                               |.|..|      +.-|....
T Consensus       178 s~rGhp~C~~C~~~fld~~el~rH~~~~h-------------------------------~~chfC~~~~~~neyy~~~~  226 (669)
T KOG2231|consen  178 SCRGHPLCKFCHERFLDDDELYRHLRFDH-------------------------------EFCHFCDYKTGQNEYYNDYD  226 (669)
T ss_pred             cccCCccchhhhhhhccHHHHHHhhccce-------------------------------eheeecCcccccchhcccch
Confidence              233689999999988 88999988764                               344444      45677788


Q ss_pred             HHHHHHhHhcCCCCcccccc--cccc-cc----CChHHHHHHHHHhc-CCCCccC
Q psy7463         137 NMLRHYLLKHRGDKVFYACD--RCDK-RF----SLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       137 ~l~~H~~~~H~~~~~~~~C~--~C~~-~f----~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      .|..|.+..|      |.|.  .|.- .|    .....|++|.+.+. ++.|.|.
T Consensus       227 dLe~HfR~~H------flCE~~~C~~~~f~~~~~~ei~lk~~~~~~~~e~~~~~~  275 (669)
T KOG2231|consen  227 DLEEHFRKGH------FLCEEEFCRTKKFYVAFELEIELKAHNRFIQHEKCYICR  275 (669)
T ss_pred             HHHHHhhhcC------ccccccccccceeeehhHHHHHHHhhccccchheeccCC
Confidence            9999987766      6776  4532 22    33444444443222 5555553

>smart00355 ZnF_C2H2 zinc finger

Probab=96.97  E-value=0.00066  Score=34.44  Aligned_cols=20  Identities=35%  Similarity=0.547  Sum_probs=10.5

Q ss_pred             cccccccccCChHHHHHHHH
Q psy7463         208 QCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       208 ~C~~C~~~f~~~~~L~~H~~  227 (319)
                      .|+.|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHH
Confidence            45555555555555555554

>smart00355 ZnF_C2H2 zinc finger

Probab=96.93  E-value=0.00082  Score=34.06  Aligned_cols=23  Identities=39%  Similarity=0.908  Sum_probs=14.4

Q ss_pred             cccccchhccccHHHHHHHHHHh
Q psy7463          15 QKCPLCERLYKSVYRMKEHMKKQ   37 (319)
Q Consensus        15 ~~C~~C~~~f~~~~~l~~H~~~h   37 (319)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45666666666666666666644

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.74  E-value=0.00074  Score=34.14  Aligned_cols=22  Identities=18%  Similarity=0.676  Sum_probs=13.4

Q ss_pred             cccccchhccccHHHHHHHHHH
Q psy7463          15 QKCPLCERLYKSVYRMKEHMKK   36 (319)
Q Consensus        15 ~~C~~C~~~f~~~~~l~~H~~~   36 (319)
                      |.|++|++.|.+...|+.|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666554

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.67  E-value=0.0015  Score=32.60  Aligned_cols=23  Identities=35%  Similarity=0.720  Sum_probs=13.7

Q ss_pred             cccccchhccccHHHHHHHHHHhc
Q psy7463          15 QKCPLCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        15 ~~C~~C~~~f~~~~~l~~H~~~h~   38 (319)
                      |.|+.|+.... ...|.+|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56677776666 666777766654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.63  E-value=0.0012  Score=38.78  Aligned_cols=26  Identities=27%  Similarity=0.515  Sum_probs=15.2

Q ss_pred             cccccccccccCChHHHHHHHHhhcc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~  231 (319)
                      |-.|++|+..+.+..+|++|++..|.
T Consensus        24 PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             CCCCCcchhhccchhhHHHHHHHHhc
Confidence            56777777777777777777765553

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.63  E-value=0.0046  Score=51.94  Aligned_cols=76  Identities=20%  Similarity=0.400  Sum_probs=50.5

Q ss_pred             cccccccccCChHHHHHHHHHhcCCCCccCchh----hccCCHHHHHHHHHhcCCCcccccc--cc----cccCChHHHH
Q psy7463         154 ACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCD----KKYSRLSDYKIHMNMHNGFKYQCHI--CL----KCTSRKNYLK  223 (319)
Q Consensus       154 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~----~~f~~~~~l~~H~~~h~~~~~~C~~--C~----~~f~~~~~L~  223 (319)
                      .|..|...|-+...|..|+|..+++-|.|+.=+    .-|.+-..|..|.+.-+   |.|.+  |-    ..|...-.|.
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h---y~ct~qtc~~~k~~vf~~~~el~  298 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAH---YCCTFQTCRVGKCYVFPYHTELL  298 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCc---eEEEEEEEecCcEEEeccHHHHH
Confidence            578888888888888888876666544443322    34677777888766433   33322  21    5788888899


Q ss_pred             HHHHhhccc
Q psy7463         224 RHIIMMHTK  232 (319)
Q Consensus       224 ~H~~~~H~~  232 (319)
                      .|+...|..
T Consensus       299 ~h~~~~h~~  307 (493)
T COG5236         299 EHLTRFHKV  307 (493)
T ss_pred             HHHHHHhhc
Confidence            998878865

>KOG2482|consensus

Probab=96.61  E-value=0.0086  Score=50.28  Aligned_cols=140  Identities=21%  Similarity=0.240  Sum_probs=86.2

Q ss_pred             cccCCCcccc-CChhHHHHHHhHhcCCCCc--------------------cccccccccccCChHHHHHHHHHhc--CCC
Q psy7463         123 LQCNLCADTF-CPRSNMLRHYLLKHRGDKV--------------------FYACDRCDKRFSLLQNLKRHLAIHE--RIA  179 (319)
Q Consensus       123 ~~C~~C~~~f-~~~~~l~~H~~~~H~~~~~--------------------~~~C~~C~~~f~~~~~L~~H~~~h~--~~~  179 (319)
                      .+|-.|...+ ..++.+..|+...|.-.-.                    .+.|-.|.+.|..+..|+.||+...  +..
T Consensus       145 lqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrrin  224 (423)
T KOG2482|consen  145 LQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRRIN  224 (423)
T ss_pred             eEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCcccC
Confidence            6899998655 4567888888777742110                    1678888888888888888887542  110


Q ss_pred             CccCchhhcc--------CCHHHHHHHH--Hhc---------------CC-Cc--ccccccccccCChHHHHHHHHhhcc
Q psy7463         180 YQCNVCDKKY--------SRLSDYKIHM--NMH---------------NG-FK--YQCHICLKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       180 ~~C~~C~~~f--------~~~~~l~~H~--~~h---------------~~-~~--~~C~~C~~~f~~~~~L~~H~~~~H~  231 (319)
                      -+=..-++-|        ++......+.  .+-               .+ .+  ..|-.|....-+...|..||+.+|.
T Consensus       225 PknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~vHe  304 (423)
T KOG2482|consen  225 PKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKIVHE  304 (423)
T ss_pred             CCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHHHHH
Confidence            0000011100        0000011111  110               01 12  5899998888889999999998883


Q ss_pred             c--------------------------cccccccchhhhhhhhhhHHHHHhcCCCCC
Q psy7463         232 K--------------------------FEGQIGEMEDKVGEKKIGEIEAKVGEGNQG  262 (319)
Q Consensus       232 ~--------------------------~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~  262 (319)
                      -                          ...-.|..|+..|..+..+..|+..++..+
T Consensus       305 ~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~k~l~  361 (423)
T KOG2482|consen  305 FDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVEDKHLS  361 (423)
T ss_pred             hhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccccccc
Confidence            2                          122457889999999999999988776653

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.53  E-value=0.001  Score=33.57  Aligned_cols=20  Identities=40%  Similarity=0.725  Sum_probs=9.7

Q ss_pred             cccccccccCChHHHHHHHH
Q psy7463         208 QCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       208 ~C~~C~~~f~~~~~L~~H~~  227 (319)
                      .|.+|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            44445555555555544443

>PRK04860 hypothetical protein; Provisional

Probab=96.47  E-value=0.0015  Score=49.91  Aligned_cols=39  Identities=21%  Similarity=0.617  Sum_probs=31.4

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCH
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDR   55 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   55 (319)
                      -+|.|. |+.   ....+.+|.++|.++++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            468887 887   566788899999988899999898877543

>KOG1146|consensus

Probab=96.46  E-value=0.0014  Score=64.33  Aligned_cols=110  Identities=17%  Similarity=0.348  Sum_probs=77.8

Q ss_pred             ccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc--------------------------C
Q psy7463         124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE--------------------------R  177 (319)
Q Consensus       124 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~--------------------------~  177 (319)
                      .|..|+..+.....+..|....|...+. |+|+.|++.|+....|..|+|..+                          .
T Consensus       438 e~~~~e~~~~s~r~~~~~t~~L~S~~kt-~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~  516 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTVVLHSFFKT-LKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPG  516 (1406)
T ss_pred             cccchhhhhhhhcccccceeeeeccccc-ccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCC
Confidence            3445555566666666666566666665 788888888888888888887621                          2


Q ss_pred             CCCccCchhhccCCHHHHHHHHHhcC-------------------------------------C------C-cccccccc
Q psy7463         178 IAYQCNVCDKKYSRLSDYKIHMNMHN-------------------------------------G------F-KYQCHICL  213 (319)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~h~-------------------------------------~------~-~~~C~~C~  213 (319)
                      ++|.|..|..++..+.+|..|+..--                                     +      + ++.|.+|+
T Consensus       517 ~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~  596 (1406)
T KOG1146|consen  517 KPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCS  596 (1406)
T ss_pred             CcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhc
Confidence            46888888888888888888875310                                     0      1 28899999


Q ss_pred             cccCChHHHHHHHHhhccccc
Q psy7463         214 KCTSRKNYLKRHIIMMHTKFE  234 (319)
Q Consensus       214 ~~f~~~~~L~~H~~~~H~~~~  234 (319)
                      +.-.-..+|..|+...+.-..
T Consensus       597 yetniarnlrihmtss~~s~~  617 (1406)
T KOG1146|consen  597 YETNIARNLRIHMTASPSSSP  617 (1406)
T ss_pred             chhhhhhccccccccCCCCCC
Confidence            888888888888875554433

>KOG2482|consensus

Probab=96.41  E-value=0.017  Score=48.62  Aligned_cols=162  Identities=19%  Similarity=0.219  Sum_probs=92.3

Q ss_pred             HHHHHHhccCC---ccccccchhhhh--HHHHHHHhhcCCCCCCCCcCccccchhhhHHHHHHhhhCCcccccCCCcccc
Q psy7463          58 YEEHVRLHEGG---IICRLCGEKFEK--SLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTF  132 (319)
Q Consensus        58 l~~H~~~h~~~---~~C~~C~~~f~~--~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f  132 (319)
                      |.+|++.-.+.   .+|-+|...+.-  +....|+-..++-...-+. +..+-   ..+..+.... -..+.|-.|.+.|
T Consensus       131 LeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpD-niVyv---nelLehLkek-L~r~~CLyCekif  205 (423)
T KOG2482|consen  131 LEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPD-NIVYV---NELLEHLKEK-LERLRCLYCEKIF  205 (423)
T ss_pred             HHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCc-ceeeH---HHHHHHHHHH-Hhhheeeeecccc
Confidence            44444443333   689999988853  6677776554431100000 00000   2222222211 1248999999999


Q ss_pred             CChhHHHHHHhHh-cCCCCcc-------ccccccccccCChHHHHHHHH----Hh----------------cCCC--Ccc
Q psy7463         133 CPRSNMLRHYLLK-HRGDKVF-------YACDRCDKRFSLLQNLKRHLA----IH----------------ERIA--YQC  182 (319)
Q Consensus       133 ~~~~~l~~H~~~~-H~~~~~~-------~~C~~C~~~f~~~~~L~~H~~----~h----------------~~~~--~~C  182 (319)
                      ..+.-|+.||+.. |..-.|.       |.=.+   .-..++....|..    +-                ...+  .+|
T Consensus       206 rdkntLkeHMrkK~HrrinPknreYDkfyiINY---~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~C  282 (423)
T KOG2482|consen  206 RDKNTLKEHMRKKRHRRINPKNREYDKFYIINY---LEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVC  282 (423)
T ss_pred             CCcHHHHHHHHhccCcccCCCccccceEEEEeH---hhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEE
Confidence            9999999999654 4332221       11111   0011111112211    10                0112  589


Q ss_pred             CchhhccCCHHHHHHHHHhcCC----------------------------CcccccccccccCChHHHHHHHH
Q psy7463         183 NVCDKKYSRLSDYKIHMNMHNG----------------------------FKYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       183 ~~C~~~f~~~~~l~~H~~~h~~----------------------------~~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      -.|....-+...|..||++-|.                            ..-.|..|.-.|.....|..||.
T Consensus       283 LfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  283 LFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             EeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence            9999999889999999986430                            02468899999999999999986

>KOG4173|consensus

Probab=95.96  E-value=0.0048  Score=47.88  Aligned_cols=83  Identities=23%  Similarity=0.448  Sum_probs=65.2

Q ss_pred             cccccc--cccccCChHHHHHHHHHhcCCCCccCchhhccCCHHHHHHHHHhcC----------CC-cccccc--ccccc
Q psy7463         152 FYACDR--CDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHN----------GF-KYQCHI--CLKCT  216 (319)
Q Consensus       152 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------~~-~~~C~~--C~~~f  216 (319)
                      .|.|++  |-..|........|..+-+  .-.|.+|.+.|.+...|..|+..-+          |. -|+|-+  |+..|
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h--~~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KF  156 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLH--GNSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKF  156 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcc--cchhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhh
Confidence            377887  7888888887888875443  3479999999999999999986533          33 399977  99999


Q ss_pred             CChHHHHHHHHhhccccccc
Q psy7463         217 SRKNYLKRHIIMMHTKFEGQ  236 (319)
Q Consensus       217 ~~~~~L~~H~~~~H~~~~~~  236 (319)
                      .+...-+.|+-..|.-...|
T Consensus       157 kT~r~RkdH~I~~Hk~Pa~f  176 (253)
T KOG4173|consen  157 KTSRDRKDHMIRMHKYPADF  176 (253)
T ss_pred             hhhhhhhhHHHHhccCCcce
Confidence            99999999998888654443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.93  E-value=0.0018  Score=33.43  Aligned_cols=19  Identities=42%  Similarity=0.826  Sum_probs=8.1

Q ss_pred             ccCchhhccCCHHHHHHHH
Q psy7463         181 QCNVCDKKYSRLSDYKIHM  199 (319)
Q Consensus       181 ~C~~C~~~f~~~~~l~~H~  199 (319)
                      .|..|++.|.+...|..|+
T Consensus         3 ~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    3 YCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             BBTTTTBBBSSHHHHHCCT
T ss_pred             CcccCCCCcCCHHHHHHHH
Confidence            3444444444444444443

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146|consensus

Probab=95.84  E-value=0.0066  Score=59.89  Aligned_cols=73  Identities=18%  Similarity=0.377  Sum_probs=56.8

Q ss_pred             cccccccCChHHHHHHHHHh-c-CCCCccCchhhccCCHHHHHHHHHhcC--------------------------CCcc
Q psy7463         156 DRCDKRFSLLQNLKRHLAIH-E-RIAYQCNVCDKKYSRLSDYKIHMNMHN--------------------------GFKY  207 (319)
Q Consensus       156 ~~C~~~f~~~~~L~~H~~~h-~-~~~~~C~~C~~~f~~~~~l~~H~~~h~--------------------------~~~~  207 (319)
                      ..|+..+.....+..|+..- . .+.|+|+.|+..|+....|..|+|.-+                          +.+|
T Consensus       440 ~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~  519 (1406)
T KOG1146|consen  440 TKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPY  519 (1406)
T ss_pred             cchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcc
Confidence            33445555555555555433 3 678999999999999999999999822                          3369


Q ss_pred             cccccccccCChHHHHHHHHh
Q psy7463         208 QCHICLKCTSRKNYLKRHIIM  228 (319)
Q Consensus       208 ~C~~C~~~f~~~~~L~~H~~~  228 (319)
                      .|..|...++.+.+|.+|+..
T Consensus       520 ~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  520 PCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             cceeeeeeeecchHHHHHHHH
Confidence            999999999999999999873

>KOG2785|consensus

Probab=95.80  E-value=0.02  Score=49.08  Aligned_cols=51  Identities=25%  Similarity=0.443  Sum_probs=43.9

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCC------------------------Ccccccccc---cccCChHHHHHHHHhh
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNG------------------------FKYQCHICL---KCTSRKNYLKRHIIMM  229 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~------------------------~~~~C~~C~---~~f~~~~~L~~H~~~~  229 (319)
                      |-.|-+|++.+.+...-..||..+||                        .-|.|-.|+   +.|.+....+.||...
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~K  243 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRDK  243 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhhc
Confidence            67899999999999999999998773                        127899999   9999999999999843

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.66  E-value=0.004  Score=32.09  Aligned_cols=22  Identities=27%  Similarity=0.815  Sum_probs=13.9

Q ss_pred             cccccchhhccCHHHHHHHHHh
Q psy7463          43 YECDCCTEYFIDRIAYEEHVRL   64 (319)
Q Consensus        43 ~~C~~C~~~f~~~~~l~~H~~~   64 (319)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5566666666666666666553

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=95.59  E-value=0.0041  Score=47.56  Aligned_cols=35  Identities=23%  Similarity=0.582  Sum_probs=18.9

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccC
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTS  217 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~  217 (319)
                      +|.|. |+.   ....++.|.++|.+. +|.|..|+..|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            45555 554   444455555555554 455555555554

>KOG4173|consensus

Probab=95.02  E-value=0.037  Score=43.09  Aligned_cols=91  Identities=18%  Similarity=0.404  Sum_probs=50.9

Q ss_pred             cccccc--chhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCCccccccchhhhhHHHHHHHhhcC
Q psy7463          14 PQKCPL--CERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHLVTHI   91 (319)
Q Consensus        14 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~l~~H~~~h~   91 (319)
                      .|.|++  |...|.....+..|..+-++   -.|..|.+.|.+...|..|+...+.                        
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HD------------------------  131 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHD------------------------  131 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHH------------------------
Confidence            455655  55666666666666654444   3466666666666666666543322                        


Q ss_pred             CCCCCCCcCccccchhhhHHHHHHhhhCCccccc--CCCccccCChhHHHHHHhHhcCCC
Q psy7463          92 PPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQC--NLCADTFCPRSNMLRHYLLKHRGD  149 (319)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~  149 (319)
                                        .+-......+..-|+|  +.|+..|.+...-..|+..+|.-.
T Consensus       132 ------------------s~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk~P  173 (253)
T KOG4173|consen  132 ------------------SLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHKYP  173 (253)
T ss_pred             ------------------HHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhccCC
Confidence                              1111111122223777  458888888888888877777643

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.81  E-value=0.026  Score=28.38  Aligned_cols=20  Identities=25%  Similarity=0.453  Sum_probs=13.0

Q ss_pred             ccccccccccCChHHHHHHHH
Q psy7463         207 YQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      ..|+.|++.| ....|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3567777777 5666666654

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.80  E-value=0.027  Score=28.35  Aligned_cols=19  Identities=21%  Similarity=0.670  Sum_probs=10.0

Q ss_pred             ccCchhhccCCHHHHHHHHH
Q psy7463         181 QCNVCDKKYSRLSDYKIHMN  200 (319)
Q Consensus       181 ~C~~C~~~f~~~~~l~~H~~  200 (319)
                      .|+.||+.| ..+.|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 4445555544

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.98  E-value=0.037  Score=30.31  Aligned_cols=23  Identities=22%  Similarity=0.498  Sum_probs=15.1

Q ss_pred             ccccccchhccccHHHHHHHHHH
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKK   36 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~   36 (319)
                      +|.|+.|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46677777777766666666653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=93.70  E-value=0.02  Score=45.58  Aligned_cols=49  Identities=18%  Similarity=0.445  Sum_probs=38.4

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHH-HHhc
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEH-VRLH   65 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h   65 (319)
                      ..-+|=+|++.|....-|.+|++..    -|+|.+|.+...+--.|..| |+.|
T Consensus         9 ~kpwcwycnrefddekiliqhqkak----hfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen    9 DKPWCWYCNREFDDEKILIQHQKAK----HFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             CCceeeecccccchhhhhhhhhhhc----cceeeeehhhhccCCCceeehhhhh
Confidence            3447999999999999999998754    49999999887776666666 4444

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.60  E-value=0.049  Score=29.83  Aligned_cols=22  Identities=14%  Similarity=0.427  Sum_probs=19.0

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy7463         206 KYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      +|.|.+|++.|.+...+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5789999999998888888876

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.42  E-value=0.13  Score=36.75  Aligned_cols=78  Identities=17%  Similarity=0.313  Sum_probs=44.6

Q ss_pred             ccccccccccCChHHHHHHHHHhc-CC-CCccCchhhccCCHHHH-HHHHHhc---------CCC----cccc----ccc
Q psy7463         153 YACDRCDKRFSLLQNLKRHLAIHE-RI-AYQCNVCDKKYSRLSDY-KIHMNMH---------NGF----KYQC----HIC  212 (319)
Q Consensus       153 ~~C~~C~~~f~~~~~L~~H~~~h~-~~-~~~C~~C~~~f~~~~~l-~~H~~~h---------~~~----~~~C----~~C  212 (319)
                      ..|..|+.+... +.+..|++..+ .. ...-..=...+.....| ......-         .|.    -|.|    +.|
T Consensus        12 lIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~~C   90 (109)
T PF12013_consen   12 LICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPPHC   90 (109)
T ss_pred             EEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCCCC
Confidence            689999988766 88999998443 21 11010000011110001 0000000         011    2899    999


Q ss_pred             ccccCChHHHHHHHHhhcc
Q psy7463         213 LKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       213 ~~~f~~~~~L~~H~~~~H~  231 (319)
                      ++.+.+...+.+|++.+|+
T Consensus        91 ~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   91 GYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CcEeccHHHHHHHHHHhcC
Confidence            9999999999999997774

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=92.85  E-value=0.032  Score=44.52  Aligned_cols=42  Identities=26%  Similarity=0.514  Sum_probs=30.3

Q ss_pred             cccccccccCChHHHHHHHHHhcCCCCccCchhhccCCHHHHHHH
Q psy7463         154 ACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIH  198 (319)
Q Consensus       154 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H  198 (319)
                      .|.+|++.|..+..|..|++.   +-|+|.+|-+...+--.|..|
T Consensus        12 wcwycnrefddekiliqhqka---khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA---KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeecccccchhhhhhhhhhh---ccceeeeehhhhccCCCceee
Confidence            578888888888877777663   357788887776666666666

>KOG2785|consensus

Probab=92.46  E-value=0.45  Score=41.12  Aligned_cols=137  Identities=19%  Similarity=0.251  Sum_probs=92.2

Q ss_pred             cccCCCccccCChhHHHHHHhHh-cC-----------------------------------CCCccccccccccccCChH
Q psy7463         123 LQCNLCADTFCPRSNMLRHYLLK-HR-----------------------------------GDKVFYACDRCDKRFSLLQ  166 (319)
Q Consensus       123 ~~C~~C~~~f~~~~~l~~H~~~~-H~-----------------------------------~~~~~~~C~~C~~~f~~~~  166 (319)
                      |.|..|...|.+....+.|.... |.                                   .+.+ +.|..|.+.|.+..
T Consensus         4 ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~-~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    4 FTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESV-VYCEACNKSFASPK   82 (390)
T ss_pred             ceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccc-eehHHhhccccChh
Confidence            89999999999998888886422 21                                   1112 78999999999999


Q ss_pred             HHHHHHHHhc-----CC-------------CCc-------------cCchhhccCCHHHHHHHHH------hcC-C----
Q psy7463         167 NLKRHLAIHE-----RI-------------AYQ-------------CNVCDKKYSRLSDYKIHMN------MHN-G----  204 (319)
Q Consensus       167 ~L~~H~~~h~-----~~-------------~~~-------------C~~C~~~f~~~~~l~~H~~------~h~-~----  204 (319)
                      ....|+..-.     .+             ...             +..+-..+........+..      +-. +    
T Consensus        83 a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~~e~  162 (390)
T KOG2785|consen   83 AHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGDDED  162 (390)
T ss_pred             hHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccchhc
Confidence            8888875421     00             112             3333333333222222211      100 1    


Q ss_pred             --CcccccccccccCChHHHHHHHHhhcccc----------------------ccccccchh---hhhhhhhhHHHHHhc
Q psy7463         205 --FKYQCHICLKCTSRKNYLKRHIIMMHTKF----------------------EGQIGEMED---KVGEKKIGEIEAKVG  257 (319)
Q Consensus       205 --~~~~C~~C~~~f~~~~~L~~H~~~~H~~~----------------------~~~~c~~c~---~~~~~~~~~~~~~~~  257 (319)
                        .|-.|-.|++.|.+...-..||...|+-.                      ..+.|-.|.   +.|.+..+...|+..
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence              15789999999999999999999788542                      237888898   999999999999886


Q ss_pred             CCC
Q psy7463         258 EGN  260 (319)
Q Consensus       258 ~~~  260 (319)
                      .+.
T Consensus       243 K~H  245 (390)
T KOG2785|consen  243 KGH  245 (390)
T ss_pred             ccC
Confidence            554

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.39  E-value=0.095  Score=31.45  Aligned_cols=32  Identities=22%  Similarity=0.437  Sum_probs=19.0

Q ss_pred             cCCCCccccccccchhccccHHHHHHHHHHhc
Q psy7463           7 DLKDKVVPQKCPLCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   38 (319)
                      ...+|+--+.|+.|++.|.......+|...-+
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            34455556666666666666666666665443

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=91.90  E-value=0.062  Score=29.09  Aligned_cols=10  Identities=30%  Similarity=0.962  Sum_probs=4.5

Q ss_pred             cccccccccc
Q psy7463         153 YACDRCDKRF  162 (319)
Q Consensus       153 ~~C~~C~~~f  162 (319)
                      |.|..||..+
T Consensus         2 ~~C~~CGy~y   11 (33)
T cd00350           2 YVCPVCGYIY   11 (33)
T ss_pred             EECCCCCCEE
Confidence            3444444443

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.69  E-value=0.015  Score=52.70  Aligned_cols=56  Identities=20%  Similarity=0.453  Sum_probs=50.8

Q ss_pred             cccccccchhccccHHHHHHHHH--HhcCC--Cccccc--cchhhccCHHHHHHHHHhccCC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMK--KQHKG--QLYECD--CCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|...|.+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  349 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSI  349 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCC
Confidence            47899999999999999999999  79999  999999  7999999999999998888764

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.42  E-value=0.09  Score=31.55  Aligned_cols=27  Identities=22%  Similarity=0.287  Sum_probs=23.5

Q ss_pred             cccccccccccCChHHHHHHHHhhccc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHTK  232 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  232 (319)
                      -+.||.|+..|....++.+|+...|.-
T Consensus        17 ~lrCPRC~~~FR~~K~Y~RHVNKaH~~   43 (65)
T COG4049          17 FLRCPRCGMVFRRRKDYIRHVNKAHGW   43 (65)
T ss_pred             eeeCCchhHHHHHhHHHHHHhhHHhhh
Confidence            389999999999999999999877753

>KOG2186|consensus

Probab=90.65  E-value=0.16  Score=41.16  Aligned_cols=47  Identities=26%  Similarity=0.449  Sum_probs=34.1

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCCCcccccccccccCChHHHHHHHH
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      -|.|..||....-. .+..|+...++.-|.|-.|++.|.. .++..|..
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHHhccCCeeEEeeccccccc-chhhhhhh
Confidence            36777777777543 4666877777767888888888877 67777776

>TIGR00622 ssl1 transcription factor ssl1

Probab=90.30  E-value=0.4  Score=34.06  Aligned_cols=20  Identities=20%  Similarity=0.567  Sum_probs=13.3

Q ss_pred             ccccCCCccccCChhHHHHH
Q psy7463         122 KLQCNLCADTFCPRSNMLRH  141 (319)
Q Consensus       122 ~~~C~~C~~~f~~~~~l~~H  141 (319)
                      |..|++||-.......|.+-
T Consensus        15 P~~CpiCgLtLVss~HLARS   34 (112)
T TIGR00622        15 PVECPICGLTLILSTHLARS   34 (112)
T ss_pred             CCcCCcCCCEEeccchHHHh
Confidence            56777777777666666554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=89.73  E-value=0.56  Score=33.49  Aligned_cols=70  Identities=20%  Similarity=0.289  Sum_probs=45.3

Q ss_pred             cccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc------------------------CC
Q psy7463         123 LQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE------------------------RI  178 (319)
Q Consensus       123 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~------------------------~~  178 (319)
                      ..|..|+..... +++..|++..|..... ..-          ..+..-.+...                        -.
T Consensus        12 lIC~~C~~av~~-~~v~~HL~~~H~~~~~-~~~----------~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~   79 (109)
T PF12013_consen   12 LICRQCQYAVQP-SEVESHLRKRHHILKS-QER----------QRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYD   79 (109)
T ss_pred             EEeCCCCcccCc-hHHHHHHHHhcccccH-HHH----------HHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCC
Confidence            789999988855 8999999766654322 100          11111111100                        01


Q ss_pred             CCcc----CchhhccCCHHHHHHHHHhcCC
Q psy7463         179 AYQC----NVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       179 ~~~C----~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      -|.|    ..|++.+.+...+..|++.++|
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            2889    9999999999999999988775

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.27  E-value=0.078  Score=47.98  Aligned_cols=120  Identities=26%  Similarity=0.452  Sum_probs=83.5

Q ss_pred             ccccCCCccccCChhHHHHHHhH-hcCCC--Ccccccc--ccccccCChHHHHHHHHHhc-CCCCccCc-----------
Q psy7463         122 KLQCNLCADTFCPRSNMLRHYLL-KHRGD--KVFYACD--RCDKRFSLLQNLKRHLAIHE-RIAYQCNV-----------  184 (319)
Q Consensus       122 ~~~C~~C~~~f~~~~~l~~H~~~-~H~~~--~~~~~C~--~C~~~f~~~~~L~~H~~~h~-~~~~~C~~-----------  184 (319)
                      ++.|..|...|.....|..|... .|.++  ++ +.|+  .|++.|.....+..|...|. ..++.+..           
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKP-FSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCc-eeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            47888899999899999999843 78888  77 8888  79999999888888888775 22222222           


Q ss_pred             --------------------------hhhccCCHHHHHHHHHhcCCC---cccccccccccCChHHHHHHHHhhcccccc
Q psy7463         185 --------------------------CDKKYSRLSDYKIHMNMHNGF---KYQCHICLKCTSRKNYLKRHIIMMHTKFEG  235 (319)
Q Consensus       185 --------------------------C~~~f~~~~~l~~H~~~h~~~---~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  235 (319)
                                                |-..+.....+..|...|...   .+.+..|.+.|.....|..|++ .|....+
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  446 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKK-IHTNHAP  446 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCccccccccc-ccccCCc
Confidence                                      233333333333333333332   3778889999999999999988 7777666


Q ss_pred             ccccchhh
Q psy7463         236 QIGEMEDK  243 (319)
Q Consensus       236 ~~c~~c~~  243 (319)
                      +.|.....
T Consensus       447 ~~~~~~~~  454 (467)
T COG5048         447 LLCSILKS  454 (467)
T ss_pred             eeeccccc
Confidence            66655443

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.74  E-value=0.43  Score=33.89  Aligned_cols=11  Identities=27%  Similarity=0.866  Sum_probs=5.6

Q ss_pred             ccccchhcccc
Q psy7463          16 KCPLCERLYKS   26 (319)
Q Consensus        16 ~C~~C~~~f~~   26 (319)
                      .|+.||+.|..
T Consensus        11 ~Cp~CG~kFYD   21 (108)
T PF09538_consen   11 TCPSCGAKFYD   21 (108)
T ss_pred             cCCCCcchhcc
Confidence            45555555543

The function of members of this family is unknown.

>KOG2186|consensus

Probab=86.60  E-value=0.35  Score=39.23  Aligned_cols=47  Identities=21%  Similarity=0.553  Sum_probs=34.6

Q ss_pred             ccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHH
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVR   63 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   63 (319)
                      .|.|..||...+. ..+.+|+...++ .-|.|-.|++.|.. .....|..
T Consensus         3 ~FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            5788888888774 467778887777 56888888888876 66666654

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.87  E-value=0.61  Score=27.13  Aligned_cols=25  Identities=36%  Similarity=0.578  Sum_probs=14.3

Q ss_pred             cccccccccccCCh----HHHHHHHHhhc
Q psy7463         206 KYQCHICLKCTSRK----NYLKRHIIMMH  230 (319)
Q Consensus       206 ~~~C~~C~~~f~~~----~~L~~H~~~~H  230 (319)
                      ..+|.+|++.+...    +.|.+|++..|
T Consensus        16 ~a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   16 KAKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             -EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             eEEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            36777777777653    67888875454

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=84.62  E-value=0.53  Score=33.45  Aligned_cols=31  Identities=19%  Similarity=0.347  Sum_probs=20.2

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCCCcccccccccccCCh
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRK  219 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~  219 (319)
                      ...|+.||..|....          ..|..||.||..|.-.
T Consensus         9 KR~Cp~CG~kFYDLn----------k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    9 KRTCPSCGAKFYDLN----------KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cccCCCCcchhccCC----------CCCccCCCCCCccCcc
Confidence            456777777775421          1267788888777665

The function of members of this family is unknown.

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=84.10  E-value=0.55  Score=38.26  Aligned_cols=93  Identities=15%  Similarity=0.309  Sum_probs=49.1

Q ss_pred             hCCcccccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhcCCCCccCchhhccCCHHHHHH
Q psy7463         118 RNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKI  197 (319)
Q Consensus       118 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~  197 (319)
                      ++++-|+|..|...+ -...-..|+.....-+...|+|.-|++.=                .|.|-.|.--|-.....+.
T Consensus       138 hGGrif~CsfC~~fl-CEDDQFEHQAsCQvLe~E~~KC~SCNrlG----------------q~sCLRCK~cfCddHvrrK  200 (314)
T PF06524_consen  138 HGGRIFKCSFCDNFL-CEDDQFEHQASCQVLESETFKCQSCNRLG----------------QYSCLRCKICFCDDHVRRK  200 (314)
T ss_pred             CCCeEEEeecCCCee-eccchhhhhhhhhhhhccccccccccccc----------------chhhhheeeeehhhhhhhc
Confidence            444456776666433 33333445433333333236666665421                2455555555543222222


Q ss_pred             HHHhcCCCcccccccccccCChHHHHHHHH
Q psy7463         198 HMNMHNGFKYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       198 H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      =.+.--+.++.||.|+........|..-.+
T Consensus       201 g~ky~k~k~~PCPKCg~et~eTkdLSmStR  230 (314)
T PF06524_consen  201 GFKYEKGKPIPCPKCGYETQETKDLSMSTR  230 (314)
T ss_pred             ccccccCCCCCCCCCCCcccccccceeeee
Confidence            222233457999999988888877766655

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>PF12907 zf-met2: Zinc-binding

Probab=84.07  E-value=0.64  Score=26.30  Aligned_cols=29  Identities=28%  Similarity=0.339  Sum_probs=20.5

Q ss_pred             cccccccccc---CChHHHHHHHHhhcccccc
Q psy7463         207 YQCHICLKCT---SRKNYLKRHIIMMHTKFEG  235 (319)
Q Consensus       207 ~~C~~C~~~f---~~~~~L~~H~~~~H~~~~~  235 (319)
                      +.|.+|-.+|   .+...|..|....|++...
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~   33 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKHPKNTF   33 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccCCCCCH
Confidence            5688887544   5566788888888877543

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=83.92  E-value=0.64  Score=25.93  Aligned_cols=14  Identities=29%  Similarity=0.648  Sum_probs=8.1

Q ss_pred             cccCCCccccCChh
Q psy7463         123 LQCNLCADTFCPRS  136 (319)
Q Consensus       123 ~~C~~C~~~f~~~~  136 (319)
                      +.|+.|+..|.-..
T Consensus         3 ~~CP~C~~~~~v~~   16 (38)
T TIGR02098         3 IQCPNCKTSFRVVD   16 (38)
T ss_pred             EECCCCCCEEEeCH
Confidence            45666666664443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=83.38  E-value=0.66  Score=25.24  Aligned_cols=9  Identities=22%  Similarity=0.744  Sum_probs=3.6

Q ss_pred             ccccccccc
Q psy7463         153 YACDRCDKR  161 (319)
Q Consensus       153 ~~C~~C~~~  161 (319)
                      |+|..||..
T Consensus         3 ~~C~~CG~i   11 (34)
T cd00729           3 WVCPVCGYI   11 (34)
T ss_pred             EECCCCCCE
Confidence            334444433

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=82.42  E-value=1.4  Score=33.81  Aligned_cols=35  Identities=20%  Similarity=0.379  Sum_probs=26.8

Q ss_pred             cCCCccccccchhhccCHHHHHHHHHhccCCccccccchhhh
Q psy7463          38 HKGQLYECDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFE   79 (319)
Q Consensus        38 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~   79 (319)
                      ....-|.|+.|+..|+...++.       ..|.|+.||....
T Consensus       105 ~~~~~Y~Cp~c~~r~tf~eA~~-------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       105 TNNMFFICPNMCVRFTFNEAME-------LNFTCPRCGAMLD  139 (158)
T ss_pred             cCCCeEECCCCCcEeeHHHHHH-------cCCcCCCCCCEee
Confidence            3445688999999988888885       3699999987653

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=81.51  E-value=0.97  Score=27.78  Aligned_cols=10  Identities=30%  Similarity=0.876  Sum_probs=5.6

Q ss_pred             CCCCccCchh
Q psy7463         177 RIAYQCNVCD  186 (319)
Q Consensus       177 ~~~~~C~~C~  186 (319)
                      ..+|.|+.||
T Consensus        48 g~~Y~Cp~CG   57 (61)
T COG2888          48 GNPYRCPKCG   57 (61)
T ss_pred             CCceECCCcC
Confidence            3456666665

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=81.48  E-value=1  Score=25.03  Aligned_cols=12  Identities=25%  Similarity=0.578  Sum_probs=6.3

Q ss_pred             ccCCCccccCCh
Q psy7463         124 QCNLCADTFCPR  135 (319)
Q Consensus       124 ~C~~C~~~f~~~  135 (319)
                      .|+.|+..|.-.
T Consensus         4 ~CP~C~~~f~v~   15 (37)
T PF13719_consen    4 TCPNCQTRFRVP   15 (37)
T ss_pred             ECCCCCceEEcC
Confidence            455565555433

>smart00531 TFIIE Transcription initiation factor IIE

Probab=81.42  E-value=1.3  Score=33.63  Aligned_cols=38  Identities=26%  Similarity=0.599  Sum_probs=26.5

Q ss_pred             CCCccccccchhhccCHHHHHH-HHHhccCCccccccchhhh
Q psy7463          39 KGQLYECDCCTEYFIDRIAYEE-HVRLHEGGIICRLCGEKFE   79 (319)
Q Consensus        39 ~~~~~~C~~C~~~f~~~~~l~~-H~~~h~~~~~C~~C~~~f~   79 (319)
                      ...-|.|+.|+..|.....+.. .   ..+.|.|+.||....
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~~~d---~~~~f~Cp~Cg~~l~  134 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQLLD---MDGTFTCPRCGEELE  134 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHHhcC---CCCcEECCCCCCEEE
Confidence            3456899999988886655443 2   245599999987763

>smart00614 ZnF_BED BED zinc finger

Probab=81.29  E-value=1.3  Score=26.52  Aligned_cols=25  Identities=36%  Similarity=0.590  Sum_probs=15.6

Q ss_pred             ccccccccccCCh-----HHHHHHHHhhcc
Q psy7463         207 YQCHICLKCTSRK-----NYLKRHIIMMHT  231 (319)
Q Consensus       207 ~~C~~C~~~f~~~-----~~L~~H~~~~H~  231 (319)
                      -.|..|++.+...     +.|.+|++..|.
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            4566677666544     577777765453

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	319
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-09
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-08
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-06
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-06
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-06
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-06
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		7e-04
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		6e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-04
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-04
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-04
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		5e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 79/206 (38%), Gaps = 33/206 (16%)
Query: 5   ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRL 64
           ++ L+    P  CP C + +     + EH +     + Y+C  C + F D+     H R 
Sbjct: 12  QAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT 71
Query: 65  HEG--GIICRLCGEKF-EKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGI 121
           H G     C  CG+ F +++ +R H  TH               +K  A           
Sbjct: 72  HTGEKPYKCPECGKSFSQRANLRAHQRTHT-------------GEKPYA----------- 107
Query: 122 KLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAY 180
              C  C  +F   ++ LR +   H G+K  Y C  C K FS   NL  H   H     Y
Sbjct: 108 ---CPECGKSFSQLAH-LRAHQRTHTGEKP-YKCPECGKSFSREDNLHTHQRTHTGEKPY 162
Query: 181 QCNVCDKKYSRLSDYKIHMNMHNGFK 206
           +C  C K +SR     +H   H G K
Sbjct: 163 KCPECGKSFSRRDALNVHQRTHTGKK 188

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 111 LLTHYLKRNGIK-LQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLK 169
           L  H     G K  +C  C  +F  + ++ RH    H G+K  Y C  C K FS   NL+
Sbjct: 37  LAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT-HTGEKP-YKCPECGKSFSQRANLR 94
Query: 170 RHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
            H   H     Y C  C K +S+L+  + H   H G K Y+C  C K  SR++ L  H
Sbjct: 95  AHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH 152

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 153 YACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCH 210
           Y C  C K FS   NL++H   H     Y+C  C K +S+ SD + H   H G K Y+C 
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCP 64
Query: 211 ICLKCTSRKNYLKRH 225
            C K  SR ++L RH
Sbjct: 65  ECGKSFSRSDHLSRH 79

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 153 YAC--DRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQ 208
           YAC  + CD+RFS   NL RH+ IH  +  +QC +C + +SR      H+  H G K + 
Sbjct: 5   YACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 209 CHICLKCTSRKNYLKRHI 226
           C IC +  +R +  KRH 
Sbjct: 65  CDICGRKFARSDERKRHT 82

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 153 YAC--DRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQ 208
           YAC  + CD+RFS   +L RH+ IH  +  +QC +C + +SR      H+  H G K + 
Sbjct: 5   YACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 209 CHICLKCTSRKNYLKRHI 226
           C IC +  +R +  KRH 
Sbjct: 65  CDICGRKFARSDERKRHT 82

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 153 YAC--DRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQ 208
           YAC  + CD+RFS   +L RH+ IH  +  +QC +C + +SR      H+  H G K + 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 209 CHICLKCTSRKNYLKRHI 226
           C IC +  +R +  KRH 
Sbjct: 65  CDICGRKFARSDERKRHT 82

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 153 YAC--DRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQ 208
           YAC  + CD+RFS    L RH+ IH  +  +QC +C + +SR      H+  H G K + 
Sbjct: 5   YACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 209 CHICLKCTSRKNYLKRHI 226
           C IC +  +R +  KRH 
Sbjct: 65  CDICGRKFARSDERKRHT 82

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 153 YAC--DRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQ 208
           YAC  + CD+RFS    L RH+ IH  +  +QC +C + +SR      H+  H G K + 
Sbjct: 4   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 63
Query: 209 CHICLKCTSRKNYLKRHI 226
           C IC +  +R +  KRH 
Sbjct: 64  CDICGRKFARSDERKRHT 81

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 153 YAC--DRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQ 208
           YAC  + CD+RFS    L RH+ IH  +  +QC +C + +SR      H+  H G K + 
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 209 CHICLKCTSRKNYLKRHI 226
           C IC +  +R +  KRH 
Sbjct: 65  CDICGRKFARSDERKRHT 82

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 153 YAC--DRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQ 208
           YAC  + CD+RFS    L RH+ IH  +  +QC +C + +SR      H+  H G K + 
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 209 CHICLKCTSRKNYLKRHI 226
           C IC +  +R +  KRH 
Sbjct: 65  CDICGRKFARSDERKRHT 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 123 LQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQ 181
             C +C  +F  RS+ L  +LL H  D   Y C  C KRF    ++K+H  IH     ++
Sbjct: 2   FDCKICGKSF-KRSSTLSTHLLIH-SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 182 CNVCDKKYSRLSDYKIHMNMHNG 204
           C VC K +S+ S+   H   H G
Sbjct: 60  CQVCGKAFSQSSNLITHSRKHTG 82

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 13/91 (14%)
Query: 17  CPLCERLYKSVYRMKEHMKKQHKGQ-LYECDCCTEYFI--DRIAYEEHVRLHEGGI---- 69
           C +C ++++ VY +  H K  H G+  Y C  C   F   DR++Y  HVR H+G +    
Sbjct: 10  CEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSY--HVRSHDGSVGKPY 66
Query: 70  ICRLCGEKFEKSLMRDHLVTHIPPEHRGKVS 100
           IC+ CG+ F +    DHL  HI   H G  S
Sbjct: 67  ICQSCGKGFSRP---DHLNGHIKQVHSGPSS 94

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 154 ACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF---KYQC 209
           AC+ C K F  + +L RH   H     Y C VC  ++ R      H+  H+G     Y C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 210 HICLKCTSRKNYLKRHIIMMHT 231
             C K  SR ++L  HI  +H+
Sbjct: 69  QSCGKGFSRPDHLNGHIKQVHS 90

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 139 LRHYLLKHRGDKVFYACD--RCDKRFSLLQNLKRHLAIHERI-AYQCNVCDKKYSRLSDY 195
           L+ +  KH G+K  Y CD   C++RFS    LKRH   H  +  +QC  C +K+SR    
Sbjct: 24  LQMHSRKHTGEKP-YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL 82
Query: 196 KIHMNMHNGFK-YQCHI--CLKCTSRKNYLKRHIIM 228
           K H   H G K + C    C K  +R + L RH  M
Sbjct: 83  KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 148 GDKVFYACDRCDKRFSLLQNLKRHLAIHERI-AYQCNVCDKKYSRLSDYKIHMNMHNGFK 206
           GDK+ Y C +C K F+      RH+++H  +  Y C VC KK+        HM +H G K
Sbjct: 7   GDKL-YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 207 -YQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE 239
            Y+C+IC K    ++   RH+      +E    E
Sbjct: 65  PYECNICAKRFMWRDSFHRHVTSCTKSYEAAKAE 98

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 153 YACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK 206
           Y CDRC   F    NL  H  +H     Y+CN+C  +++R ++ K H  +H+G K
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 153 YAC--DRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQ 208
           YAC  + CD+RFS   NL  H+ IH  +  +QC +C + +S+ +    H+  H G K + 
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFA 64
Query: 209 CHIC 212
           C IC
Sbjct: 65  CDIC 68

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 153 YAC--DRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQ 208
           YAC  + CD+RFS   NL  H+ IH  +  +QC +C + +S+ +    H+  H G K + 
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFA 64
Query: 209 CHIC 212
           C IC
Sbjct: 65  CDIC 68

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 125 CNLCADTFCPRSNMLRHYLLKHRGDKVFYAC-DRCDKRFSLLQNLKRHLAIHERI-AYQC 182
           C  C   F   S + RH L+ H G+K F    + C KRFSL  NL+ H+ IH     Y C
Sbjct: 37  CAECGKAFVESSKLKRHQLV-HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 95
Query: 183 --NVCDKKYSRLSDYKIHMNMH 202
             + C+KK+++ ++ K H+  H
Sbjct: 96  PFDGCNKKFAQSTNLKSHILTH 117

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIH----ERIAYQCNVCDKKYSRLSDYKIHMN 200
           KH G+K F  C +C K +   +NL  H A +        + C+VC + + R  + ++HM 
Sbjct: 29  KHTGEKPF-ECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMV 87
Query: 201 MHNG-FKYQCHICLKCTSRKNYLKRHIIMMHT 231
            H G   Y+C  C +   +K  L+ H+I +H+
Sbjct: 88  SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 134 PRSNMLRHYLLKHRGDKVFYAC--DRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYS 190
           P +N+L + + K R     YAC  + CD+RFS    L RH+ IH  +  +QC +C + +S
Sbjct: 5   PMNNLLNYVVPKMRP----YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 191 RLSDYKIHMNMH 202
           R      H+  H
Sbjct: 61  RSDHLTTHIRTH 72

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	319
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-13
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	8e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	8e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-04

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 69.1 bits (170), Expect = 3e-15
 Identities = 16/81 (19%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIH--ERIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCH 210
           + C  C + FS   +L  H+  H  E+  + C++C +K++R  + K H ++ +       
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEK-PFACDICGRKFARSDERKRHRDIQHILPILED 62

Query: 211 ICLKCTSRKNYLKRHIIMMHT 231
              +  S+  +L+  +  +  
Sbjct: 63  KVEELLSKNYHLENEVARLKK 83

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 65.6 bits (161), Expect = 1e-13
 Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 15/117 (12%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIA---- 179
           +C  C   F  +  +  H    H G+K  + C +C K +      K +L  HE       
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRK-HTGEKP-FECPKCGKCYFR----KENLLEHEARNCMNR 62

Query: 180 ----YQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHT 231
               + C+VC + + R  + ++HM  H G   Y+C  C +   +K  L+ H+I +H+
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 52.9 bits (128), Expect = 4e-09
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 13/82 (15%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIHERI-----AYQCNVCDKKYSRLSDYKIHM---NMHNG 204
             C  C K+F      K +L +H R       ++C  C K Y R  +   H     M+  
Sbjct: 8   VECPTCHKKFL----SKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63

Query: 205 FK-YQCHICLKCTSRKNYLKRH 225
            + + C +C +   R+  L+ H
Sbjct: 64  EQVFTCSVCQETFRRRMELRLH 85

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 43.6 bits (104), Expect = 8e-06
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH--IIMMHT 231
            +C  C KK+      K+H   H G K ++C  C KC  RK  L  H     M+ 
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 63.3 bits (155), Expect = 4e-13
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 7/84 (8%)

Query: 153 YACDR--CDKRFSLLQNLKRHLAIH--ERIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-Y 207
           YAC    CD+RFS   +L RH+ IH  ++  +QC +C + +SR      H+  H G K +
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQK-PFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63

Query: 208 QCHICLKCTSRKNYLKRHIIMMHT 231
            C IC +  +R +  KRH   +H 
Sbjct: 64  ACDICGRKFARSDERKRH-TKIHL 86

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 51.3 bits (124), Expect = 8e-09
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQCNVC 185
           C   F    ++ RH  + H G K  + C  C + FS   +L  H+  H  E+  + C++C
Sbjct: 12  CDRRFSQSGSLTRHIRI-HTGQK-PFQCRICMRNFSRSDHLTTHIRTHTGEK-PFACDIC 68

Query: 186 DKKYSRLSDYKIHMNMHNGFK 206
            +K++R  + K H  +H   K
Sbjct: 69  GRKFARSDERKRHTKIHLRQK 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 61.4 bits (150), Expect = 4e-12
 Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 10/105 (9%)

Query: 128 CADTFCPRSNMLRHYLLKHRGDKVFYACDR--CDKRFSLLQNLKRHLAIH--ERIAYQCN 183
           C   +   S++  H   KH G+K  Y CD   C++RFS    LKRH   H   +  +QC 
Sbjct: 14  CNKRYFKLSHLQMH-SRKHTGEKP-YQCDFKDCERRFSRSDQLKRHQRRHTGVK-PFQCK 70

Query: 184 VCDKKYSRLSDYKIHMNMHNGFK-YQCHI--CLKCTSRKNYLKRH 225
            C +K+SR    K H   H G K + C    C K  +R + L RH
Sbjct: 71  TCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 57.9 bits (141), Expect = 6e-11
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 9/86 (10%)

Query: 153 YACD--RCDKRFSLLQNLKRHLAIH--ERIAYQCNV--CDKKYSRLSDYKIHMNMHNGFK 206
           + C    C+KR+  L +L+ H   H  E+  YQC+   C++++SR    K H   H G K
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEK-PYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65

Query: 207 -YQCHICLKCTSRKNYLKRHIIMMHT 231
            +QC  C +  SR ++LK H    HT
Sbjct: 66  PFQCKTCQRKFSRSDHLKTH-TRTHT 90

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 9/85 (10%)

Query: 124 QCNL--CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIA 179
           QC+   C   F     + RH   +H G K  + C  C ++FS   +LK H   H  E+  
Sbjct: 38  QCDFKDCERRFSRSDQLKRH-QRRHTGVKP-FQCKTCQRKFSRSDHLKTHTRTHTGEK-P 94

Query: 180 YQCNV--CDKKYSRLSDYKIHMNMH 202
           + C    C KK++R  +   H NMH
Sbjct: 95  FSCRWPSCQKKFARSDELVRHHNMH 119

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.5 bits (140), Expect = 3e-11
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 167 NLKRHLAIH--ERIAYQCNVCDKKYSRLSDYKIHMNMHNGFK---YQCHICLKCTSRKNY 221
           +       H  E+  Y+C +C  ++++    K+H+   +      + C  C    +RK+ 
Sbjct: 2   SSGSSGRTHSGEK-PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 222 LKRHIIMMHT 231
           L  H+   H+
Sbjct: 61  LGVHLRKQHS 70

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.5 bits (132), Expect = 4e-10
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIH--ERIA-YQCNVCDKKYSRLSDYKIHM-NMHNGFK 206
           Y C  C  RF+    +K H+     E +A + C  CD   +R SD  +H+   H+   
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 14/49 (28%), Positives = 20/49 (40%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHL 172
           +C +C   F     M  H L KH  +   + C  CD   +   +L  HL
Sbjct: 17  ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 57.1 bits (139), Expect = 7e-11
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQCNVCDKKYSRLSDYKIHMNMHN 203
             G     AC+ C K F  + +L RH   H  E+  Y C VC  ++ R      H+  H+
Sbjct: 2   SSGSS-GVACEICGKIFRDVYHLNRHKLSHSGEK-PYSCPVCGLRFKRKDRMSYHVRSHD 59

Query: 204 G--FK-YQCHICLKCTSRKNYLKRHIIMMHT 231
           G   K Y C  C K  SR ++L  HI  +H+
Sbjct: 60  GSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIA-Y 180
            C +C   F    ++ RH L  H G+K  Y+C  C  RF     +  H+  H       Y
Sbjct: 9   ACEICGKIFRDVYHLNRHKLS-HSGEKP-YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66

Query: 181 QCNVCDKKYSRLSDYKIHM 199
            C  C K +SR      H+
Sbjct: 67  ICQSCGKGFSRPDHLNGHI 85

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 57.0 bits (139), Expect = 8e-11
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIH--ERIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQC 209
           + C+ C K FS    LK H+  H   +  Y+C  CD   +  S    H+ +H+  + ++C
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVK-PYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67

Query: 210 HICLKCTSRKNYLKRH 225
            IC   +   + L  H
Sbjct: 68  QICPYASRNSSQLTVH 83

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 53.6 bits (130), Expect = 1e-09
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQ 181
           +C +C   F  +  +  H    H G K  Y C  CD   +   +L +HL IH  ER  ++
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRC-HTGVKP-YKCKTCDYAAADSSSLNKHLRIHSDER-PFK 66

Query: 182 CNVCDKKYSRLSDYKIHMNMHNGFK-YQC 209
           C +C       S   +H+  H G      
Sbjct: 67  CQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.4 bits (101), Expect = 1e-05
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHT 231
           ++C VC K +SR    K HM  H G K Y+C  C    +  + L +H+  +H+
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHS 60

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 14/121 (11%)

Query: 124 QCNLCADTFCPRSNMLRHYLLK--HRGDKVFY----ACDRCDKRFSLLQNLKRHLAIH-- 175
           + + C+  F  +  ++ H   +  H   K F      C R  + F     L  H+  H  
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

Query: 176 ERIAYQCNV--CDKKYSRLSDYKIHMNMHNGFK-YQCH--ICLKCTSRKNYLKRHIIMMH 230
           E+  ++C    C K YSRL + K H+  H G K Y C    C K  S  +   +H    H
Sbjct: 65  EK-PHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 231 T 231
           +
Sbjct: 124 S 124

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 49.5 bits (119), Expect = 1e-07
 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 14/87 (16%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIHERI-----AYQCNVCD-----KKYSRLSDYKIHMNMH 202
              D C + F   + L  H+   E I      + C+        + +       +HM  H
Sbjct: 4   CRWDGCSQEFDSQEQLVHHIN-SEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH 62

Query: 203 NGFK-YQCHI--CLKCTSRKNYLKRHI 226
            G K ++C    C K  SR   LK H+
Sbjct: 63  TGEKPHKCTFEGCRKSYSRLENLKTHL 89

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 12/61 (19%)

Query: 153 YAC--DRCDKRFSLLQNLKRHLAIHERI-----AYQCNV--CDKKYSRLSDYKIHMNMHN 203
           Y C  + C K FS   +  +H     R       Y C +  C K+Y+  S  + H+   +
Sbjct: 98  YMCEHEGCSKAFSNASDRAKH---QNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

Query: 204 G 204
           G
Sbjct: 155 G 155

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQCNV--CDKKYSRLSDYKIHMN 200
           K            C K ++   +LK HL  H  E+  Y C+   C  K++R  +   H  
Sbjct: 1   KRTATHT-CDYAGCGKTYTKSSHLKAHLRTHTGEK-PYHCDWDGCGWKFARSDELTRHYR 58

Query: 201 MHNGFK-YQCHICLKCTSRKNYLKRH 225
            H G + +QC  C +  SR ++L  H
Sbjct: 59  KHTGHRPFQCQKCDRAFSRSDHLALH 84

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 8/91 (8%)

Query: 117 KRNGIKL-QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDR--CDKRFSLLQNLKRHLA 173
           KR          C  T+   S+ L+ +L  H G+K  Y CD   C  +F+    L RH  
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSH-LKAHLRTHTGEKP-YHCDWDGCGWKFARSDELTRHYR 58

Query: 174 IH--ERIAYQCNVCDKKYSRLSDYKIHMNMH 202
            H   R  +QC  CD+ +SR     +HM  H
Sbjct: 59  KHTGHR-PFQCQKCDRAFSRSDHLALHMKRH 88

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 58.2 bits (142), Expect = 2e-10
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQ 181
            C  C  +F    ++  H    H G+K  Y C  C K FS  ++L RH   H  E+  Y+
Sbjct: 23  ACPECGKSFSRSDHLAEHQRT-HTGEKP-YKCPECGKSFSDKKDLTRHQRTHTGEK-PYK 79

Query: 182 CNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
           C  C K +S+ ++ + H   H G K Y C  C K  S+  +L+ H
Sbjct: 80  CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAH 124

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 57.5 bits (140), Expect = 3e-10
 Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 12/108 (11%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERI----- 178
           +C  C  +F  R+N+  H    H G+K  YAC  C K FS       HL  H+R      
Sbjct: 79  KCPECGKSFSQRANLRAHQRT-HTGEKP-YACPECGKSFSQ----LAHLRAHQRTHTGEK 132

Query: 179 AYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
            Y+C  C K +SR  +   H   H G K Y+C  C K  SR++ L  H
Sbjct: 133 PYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 57.1 bits (139), Expect = 5e-10
 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 12/108 (11%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERI----- 178
           +C  C  +F  + ++ RH    H G+K  Y C  C K FS     + +L  H+R      
Sbjct: 51  KCPECGKSFSDKKDLTRHQRT-HTGEKP-YKCPECGKSFSQ----RANLRAHQRTHTGEK 104

Query: 179 AYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
            Y C  C K +S+L+  + H   H G K Y+C  C K  SR++ L  H
Sbjct: 105 PYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH 152

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 54.0 bits (131), Expect = 5e-09
 Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 12/101 (11%)

Query: 131 TFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERI-----AYQCNVC 185
           +    S+ +    L   G+K  YAC  C K FS       HLA H+R       Y+C  C
Sbjct: 2   SEFGSSSSVAQAAL-EPGEKP-YACPECGKSFS----RSDHLAEHQRTHTGEKPYKCPEC 55

Query: 186 DKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
            K +S   D   H   H G K Y+C  C K  S++  L+ H
Sbjct: 56  GKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH 96

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 44.4 bits (106), Expect = 9e-06
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 11/88 (12%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERI----- 178
            C  C  +F   +++  H    H G+K  Y C  C K FS     + +L  H+R      
Sbjct: 107 ACPECGKSFSQLAHLRAHQRT-HTGEKP-YKCPECGKSFS----REDNLHTHQRTHTGEK 160

Query: 179 AYQCNVCDKKYSRLSDYKIHMNMHNGFK 206
            Y+C  C K +SR     +H   H G K
Sbjct: 161 PYKCPECGKSFSRRDALNVHQRTHTGKK 188

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 56.5 bits (137), Expect = 5e-10
 Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 29/158 (18%)

Query: 61  HVRLHEG--GIICRLCGEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKR 118
              + E       + C   F        LVTH+  EH G                     
Sbjct: 16  CKWIDEAQLSRPKKSCDRTFSTM---HELVTHVTMEHVGGPEQNNHVCYWE--------- 63

Query: 119 NGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDR--CDKRFSLLQNLKRHLAIH- 175
                +C     +F  +  ++ H +  H G+K  + C    C K F+  +NLK H   H 
Sbjct: 64  -----ECPREGKSFKAKYKLVNH-IRVHTGEKP-FPCPFPGCGKIFARSENLKIHKRTHT 116

Query: 176 -ERIAYQCNV--CDKKYSRLSDYKIHMNMHNGFK-YQC 209
            E+  ++C    CD++++  SD K HM++H   K    
Sbjct: 117 GEK-PFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 23/117 (19%), Positives = 35/117 (29%), Gaps = 16/117 (13%)

Query: 128 CADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH----------ER 177
              +  P    L    +             CD+ FS +  L  H+ +             
Sbjct: 3   SGSSGQPIKQELSCKWI-DEAQLS-RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 178 IAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHI--CLKCTSRKNYLKRHIIMMHT 231
              +C    K +        H+ +H G K + C    C K  +R   LK H    HT
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH-KRTHT 116

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 41.9 bits (99), Expect = 6e-05
 Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 12/86 (13%)

Query: 157 RCDKRFSLLQNLKRHLAIHER-IAYQCNVCDKKYSRLSDYKIHMNMHNG----------F 205
                   ++       I E  ++     CD+ +S + +   H+ M +           +
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 206 KYQCHICLKCTSRKNYLKRHIIMMHT 231
             +C    K    K  L  H I +HT
Sbjct: 62  WEECPREGKSFKAKYKLVNH-IRVHT 86

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 54.9 bits (133), Expect = 5e-10
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 8/81 (9%)

Query: 153 YACDR--CDKRFSLLQNLKRHLAIH--ERIAYQCNV--CDKKYSRLSDYKIHMNMHNGFK 206
           + CD   C K ++   +LK HL  H  E+  Y+C    CD +++R  +   H   H G K
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTHTGEK-PYKCTWEGCDWRFARSDELTRHYRKHTGAK 74

Query: 207 -YQCHICLKCTSRKNYLKRHI 226
            +QC +C +  SR ++L  H+
Sbjct: 75  PFQCGVCNRSFSRSDHLALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%)

Query: 135 RSNMLRHYLLKHRGDKVFYAC--DRCDKRFSLLQNLKRHLAIH--ERIAYQCNVCDKKYS 190
           +S+ L+ +L  H G+K  Y C  + CD RF+    L RH   H   +  +QC VC++ +S
Sbjct: 29  KSSHLKAHLRTHTGEKP-YKCTWEGCDWRFARSDELTRHYRKHTGAK-PFQCGVCNRSFS 86

Query: 191 RLSDYKIHMNMH 202
           R     +HM  H
Sbjct: 87  RSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 169 KRHLAIHERIAYQCNV--CDKKYSRLSDYKIHMNMHNGFK-YQCHI--CLKCTSRKNYLK 223
                   RI + C+   C K Y++ S  K H+  H G K Y+C    C    +R + L 
Sbjct: 6   SGPDLEKRRI-HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELT 64

Query: 224 RHIIMMHT 231
           RH    HT
Sbjct: 65  RH-YRKHT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 4/69 (5%)

Query: 161 RFSLLQNLKRHLAIHERIAYQCNV--CDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTS 217
               + NL  ++    R  Y C V  CD+++SR  +   H+ +H G K +QC IC++  S
Sbjct: 2   EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

Query: 218 RKNYLKRHI 226
           R ++L  HI
Sbjct: 61  RSDHLTTHI 69

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 153 YACDR--CDKRFSLLQNLKRHLAIHERIA-YQCNVCDKKYSRLSDYKIHMNMH 202
           YAC    CD+RFS    L RH+ IH     +QC +C + +SR      H+  H
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIA---YQCNVCDKKYSRLSDYKIHMNMH 202
             G+   Y C  C + ++ + N  RH     +     Y C  C K+++R  +   H+ + 
Sbjct: 5   KEGEHT-YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 203 NG 204
           + 
Sbjct: 64  HK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 124 QCNLCADTFCPRSNMLRHYL-LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERI 178
           +C +C+  +   SN  RHY+    R  KV Y C  C K F+   N+  H+ I  +I
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKV-YPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 180 YQCNVCDKKYSRLSDYKIHM--NMHNGFK-YQCHICLKCTSRKNYLKRHI 226
           Y+C VC + Y+ +S++  H   +     K Y C  C K  +RK+ +  H+
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 52.4 bits (126), Expect = 3e-09
 Identities = 9/54 (16%), Positives = 16/54 (29%), Gaps = 4/54 (7%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIHERIA----YQCNVCDKKYSRLSDYKIHMNMH 202
             C+ C        +L  H   H        + C  C K++ +      H +  
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 4/57 (7%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNGFK----YQCHICLKCTSRKNYLKRHIIMMHTK 232
            QC +C     + +    H   H        + C  C K   + + +  H    H  
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.0 bits (99), Expect = 9e-06
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 123 LQCNLCADTFCPRSNMLRHYLLKH---RGDKVFYACDRCDKRFSLLQNLKRHLAIH 175
           LQC +C  T   ++++  H   KH        F  C+ C KRF    ++  H +  
Sbjct: 8   LQCEICGFTCRQKASLNWH-QRKHAETVAALRF-PCEFCGKRFEKPDSVAAHRSKS 61

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 8/85 (9%)

Query: 153 YACDR--CDKRFSLLQNLKRHLAIH--ERIAYQCNV--CDKKYSRLSDYKIHMNMHNGFK 206
           Y C    C K F     LK H   H  +   Y+C    CDK++S  S  K H  +H G+ 
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 207 -YQCHICLKCTSRKNYLKRHIIMMH 230
             +   C           +H+   H
Sbjct: 61  CKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 40.3 bits (95), Expect = 4e-05
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 5/75 (6%)

Query: 128 CADTFCPRSNMLRHYLLKHRGDKVFYACD--RCDKRFSLLQNLKRHLAIHE-RIAYQCNV 184
           C   F   + +  H    H      Y C    CDKRFSL   LKRH  +H      + + 
Sbjct: 9   CGKAFKKHNQLKVH-QFSHTQQLP-YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDS 66

Query: 185 CDKKYSRLSDYKIHM 199
           C       + Y  H+
Sbjct: 67  CSFVGKTWTLYLKHV 81

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 52.5 bits (127), Expect = 6e-09
 Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 16/117 (13%)

Query: 125 CNLCADTFCPRSNMLRHYLLKHR--GDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAY 180
              C   F   S M +H        G +V + C  C K F     LKRH  +H  E+  +
Sbjct: 10  HKGCTKMFRDNSAMRKH----LHTHGPRV-HVCAECGKAFVESSKLKRHQLVHTGEK-PF 63

Query: 181 QCNV--CDKKYSRLSDYKIHMNMHNGFK-YQCHI--CLKCTSRKNYLKRHIIMMHTK 232
           QC    C K++S   + + H+ +H G + Y C    C K  ++   LK H I+ H K
Sbjct: 64  QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH-ILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDR--CDKRFSLLQNLKRHLAIH--ERIA 179
            C  C   F   S + RH L+ H G+K  + C    C KRFSL  NL+ H+ IH  +R  
Sbjct: 36  VCAECGKAFVESSKLKRHQLV-HTGEKP-FQCTFEGCGKRFSLDFNLRTHVRIHTGDR-P 92

Query: 180 YQCNV--CDKKYSRLSDYKIHMNMHNGFK 206
           Y C    C+KK+++ ++ K H+  H   K
Sbjct: 93  YVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 51.3 bits (124), Expect = 6e-09
 Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIH--ERIAYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQC 209
           + C  C K F     L  HL IH   R  Y C  C K++ + SD K H  +H G K ++C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTR-PYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 210 HICLKCTSRKNYLKRHIIMMHT 231
            +C K  S+ + L  H    HT
Sbjct: 61  QVCGKAFSQSSNLITHSR-KHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 46.6 bits (112), Expect = 3e-07
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQ 181
            C +C  +F   S +  H L+ H   +  Y C  C KRF    ++K+H  IH  E+  ++
Sbjct: 3   DCKICGKSFKRSSTLSTHLLI-HSDTRP-YPCQYCGKRFHQKSDMKKHTFIHTGEK-PHK 59

Query: 182 CNVCDKKYSRLSDYKIHMNMHNG 204
           C VC K +S+ S+   H   H G
Sbjct: 60  CQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 36.6 bits (86), Expect = 8e-04
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 179 AYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHT 231
           ++ C +C K + R S    H+ +H+  + Y C  C K   +K+ +K+H   +HT
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF-IHT 53

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 4/64 (6%)

Query: 145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQCNVCDKKYSRLSDYKIHMNMH 202
                     C  C    S    L+ H  IH  +R  ++CN C     + S+   HM   
Sbjct: 3   SGSSGHP-EKCSECSYSCSSKAALRIHERIHCTDR-PFKCNYCSFDTKQPSNLSKHMKKF 60

Query: 203 NGFK 206
           +G  
Sbjct: 61  HGDM 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHT 231
            +C+ C    S  +  +IH  +H   + ++C+ C   T + + L +H +    
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH-MKKFH 61

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 125 CNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH 175
           C+ C+ +   ++ +  H    H  D+  + C+ C        NL +H+   
Sbjct: 12  CSECSYSCSSKAALRIH-ERIHCTDRP-FKCNYCSFDTKQPSNLSKHMKKF 60

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 51.3 bits (124), Expect = 1e-08
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQCNVCDKKYSRLSDYKIHMNMHN 203
             GDK+ Y C  C K F+      RH+++H   R  Y C VC KK+        HM +H 
Sbjct: 5   SSGDKL-YPCQ-CGKSFTHKSQRDRHMSMHLGLR-PYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 204 GFK-YQCHICLKCTSRKNYLKRHIIMMHT 231
           G K Y+C+IC K    ++   RH+    +
Sbjct: 62  GIKPYECNICAKRFMWRDSFHRHV---TS 87

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 50.9 bits (123), Expect = 1e-08
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 11/86 (12%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIHERI-----AYQCNVCDKKYSRLSDYKIHMN 200
            +  K  + C  C + F+       +L IHER       Y C++C K + R    + H  
Sbjct: 12  SKTKK-EFICKFCGRHFTK----SYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY 66

Query: 201 MHNGFK-YQCHICLKCTSRKNYLKRH 225
           +H+  K ++C  C K   +   L  H
Sbjct: 67  IHSKEKPFKCQECGKGFCQSRTLAVH 92

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 48.6 bits (117), Expect = 1e-07
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 6/89 (6%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQ 181
            C  C   F    N+L H    H  ++  Y CD C K F    +L+ H  IH  E+  ++
Sbjct: 19  ICKFCGRHFTKSYNLLIHERT-HTDER-PYTCDICHKAFRRQDHLRDHRYIHSKEK-PFK 75

Query: 182 CNVCDKKYSRLSDYKIHMNMHNGFK-YQC 209
           C  C K + +     +H  +H        
Sbjct: 76  CQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 51.1 bits (123), Expect = 5e-08
 Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 12/118 (10%)

Query: 124 QCN--LCADTFCPRSNMLRHYLLKHRGDKVF-YACDR--CDKRFSLLQNLKRHLAIH--E 176
            C+   C   F  ++NM +H+       K+  Y C    C K F     LK H   H  +
Sbjct: 74  TCDSDGCDLRFTTKANMKKHFNR-FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132

Query: 177 RIAYQCN--VCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHT 231
              Y+C    CDK++S  S  K H  +H G+   +   C           +H+   H 
Sbjct: 133 L-PYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 50.3 bits (121), Expect = 9e-08
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 124 QCNL--CADTFCPRSNMLRHYLLKHRGDKVFYACD--RCDKRFSLLQNLKRHLAIH--ER 177
            C+   C   +     +  H L KH G+K  + C    C+K F+ L +L RH   H  E+
Sbjct: 14  ICSFADCGAAYNKNWKLQAH-LCKHTGEKP-FPCKEEGCEKGFTSLHHLTRHSLTHTGEK 71

Query: 178 IAYQCN--VCDKKYSRLSDYKIHMNMHNGFK---YQCHI--CLKCTSRKNYLKRH 225
             + C+   CD +++  ++ K H N  +  K   Y CH   C K   + N LK H
Sbjct: 72  -NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH 125

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG 238
           + C VC + ++R    K H   H   K Y C +C +  +R++ L RH   +H+      G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS------G 56

Query: 239 EMED 242
            + +
Sbjct: 57  NLGE 60

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIA---YQCNVCDKKYSRLSDYKIHMN 200
           H G+K  YAC  CDK F   Q L  H   +         + C+ C K ++R +    H +
Sbjct: 10  HTGEKP-YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD 68

Query: 201 MHNGFK-YQCHICLK 214
              G    +      
Sbjct: 69  NCAGPDGVEGENSGP 83

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 10/65 (15%)

Query: 171 HLAIHERI-----AYQCNVCDKKYSRLSDYKIHMNMHNGFK-----YQCHICLKCTSRKN 220
                 R       Y C+ CDK + +     +H   ++        + C  C K  +R+N
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 221 YLKRH 225
            + RH
Sbjct: 62  TMARH 66

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 11/69 (15%), Positives = 21/69 (30%), Gaps = 7/69 (10%)

Query: 124 QCNLCADTFCPRSNMLRHYLLKHRGDKVF---YACDRCDKRFSLLQNLKRHLAIH--ERI 178
            C+ C  TF  +  +  H+   +         + C +C K F+    + RH         
Sbjct: 17  ACSHCDKTFRQKQLLDMHFKR-YHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD- 74

Query: 179 AYQCNVCDK 187
             +      
Sbjct: 75  GVEGENSGP 83

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 48.4 bits (114), Expect = 1e-07
 Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 1/88 (1%)

Query: 145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNG 204
               +K  Y C  C+ + S L     H  +    A  C  C  ++      + H +    
Sbjct: 9   SPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEY 67

Query: 205 FKYQCHICLKCTSRKNYLKRHIIMMHTK 232
            K  C  C++       + RH + +H +
Sbjct: 68  KKLTCLECMRTFKSSFSIWRHQVEVHNQ 95

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 6/64 (9%)

Query: 168 LKRHLAIHERI-----AYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNY 221
           +  H   H  +      Y+C+ C   +    +   H  +H G K Y+C+IC    +R   
Sbjct: 1   MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN 60

Query: 222 LKRH 225
           LK H
Sbjct: 61  LKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 45.1 bits (108), Expect = 6e-07
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQCNVCDKKYSRLSDYKIHMNMHN 203
              DK  Y CDRC   F    NL  H  +H  E+  Y+CN+C  +++R ++ K H  +H+
Sbjct: 12  THSDKP-YKCDRCQASFRYKGNLASHKTVHTGEK-PYRCNICGAQFNRPANLKTHTRIHS 69

Query: 204 GFK 206
           G K
Sbjct: 70  GEK 72

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 10/78 (12%)

Query: 146 HRGDKVFYACDR--CDKRFSLLQNLKRHLAI---HERIAYQCN--VCDKKYSRLSDYKIH 198
             G      CD   C + FS  Q L  H      H++ ++ C    C K ++     K H
Sbjct: 2   SSGSSG-MPCDFPGCGRIFSNRQYLNHHKKYQHIHQK-SFSCPEPACGKSFNFKKHLKEH 59

Query: 199 MNMHNGFK-YQCHICLKC 215
           M +H+  + Y C      
Sbjct: 60  MKLHSDTRDYICEFSGPS 77

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 39.5 bits (93), Expect = 9e-05
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 6/64 (9%)

Query: 128 CADTFCPRSNMLRHYLLKHRGDKVFYACD--RCDKRFSLLQNLKRHLAIH--ERIAYQCN 183
           C   F  R  +  H   +H   K  ++C    C K F+  ++LK H+ +H   R  Y C 
Sbjct: 15  CGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKKHLKEHMKLHSDTR-DYICE 72

Query: 184 VCDK 187
               
Sbjct: 73  FSGP 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.5 bits (96), Expect = 3e-05
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 171 HLAIHERI-----AYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKR 224
                E        Y+C+ C K +S  SD   H   H G K Y+C  C K   ++++L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 225 H 225
           H
Sbjct: 65  H 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.8 bits (89), Expect = 3e-04
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 136 SNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQCNVCDKKYSRLS 193
            +  R      R  +  Y CD C K FS   +L +H   H  E+  Y+C+ C K + + S
Sbjct: 4   GSSGRSEWQ-QRERRR-YKCDECGKSFSHSSDLSKHRRTHTGEK-PYKCDECGKAFIQRS 60

Query: 194 DYKIHMNMHNGFK 206
               H  +H G  
Sbjct: 61  HLIGHHRVHTGSG 73

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.1 bits (95), Expect = 4e-05
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 6/60 (10%)

Query: 172 LAIHERI-----AYQCNVCDKKYSRLSDYKIHMNMHNGFK-YQCHICLKCTSRKNYLKRH 225
            +    I      Y C  C K +SR S    H  +H G K Y+C  C K  S+ + L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.4 bits (93), Expect = 8e-05
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH--ERIAYQCNVCDKKYSRLSDYKIHMNMHN 203
           H G+K  Y C  C K FS    L +H  +H  E+  Y+C  C K +S+ S    H  +H 
Sbjct: 9   HSGEKP-YGCVECGKAFSRSSILVQHQRVHTGEK-PYKCLECGKAFSQNSGLINHQRIHT 66

Query: 204 GFK 206
              
Sbjct: 67  SGP 69

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 41.3 bits (96), Expect = 4e-05
 Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 166 QNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKR 224
            + K + +I      ++C  C   Y  L +  +HMN    ++   H       ++    R
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 225 HIIMM 229
              ++
Sbjct: 65  KRSLL 69

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 13/89 (14%), Positives = 21/89 (23%), Gaps = 8/89 (8%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGF 205
             G   F  C  C   +  L  L  H+          +  D    +        ++    
Sbjct: 14  FTGASKF-RCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME 72

Query: 206 K-------YQCHICLKCTSRKNYLKRHII 227
                    +C  C         L  H+I
Sbjct: 73  GKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 5e-05
 Identities = 47/338 (13%), Positives = 91/338 (26%), Gaps = 90/338 (26%)

Query: 19  LCERLYKSVYRMKEHMKKQHKGQLYEC--DCCTEYFIDRIAYEEHV-RLHEGGIICRLCG 75
           L  +  + V +  E + + +   L         +  +    Y E   RL+          
Sbjct: 71  LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN------- 123

Query: 76  EKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRN-GIKL--------QCN 126
           + F K     + V+ + P          + K + ALL   L+    + +           
Sbjct: 124 QVFAK-----YNVSRLQP----------YLKLRQALLE--LRPAKNVLIDGVLGSGKTW- 165

Query: 127 LCADTFCPRSNMLRHY-LLKHRGDKVFYA----CDRCDKRFSLLQNLKRHLA-------- 173
           +  D           Y +      K+F+     C+  +    +LQ L   +         
Sbjct: 166 VALDV-------CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218

Query: 174 IHERIAYQCNVCDKKYSRLSDYKIHMNM------------HNGFKYQCHICLKCTSRKNY 221
               I  + +    +  RL   K + N              N F   C I L  T+R   
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL--TTRFKQ 276

Query: 222 LKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAKVGEGNQGKEGGNQTEVG-ETSMLSNL 280
           +   +    T     +      +   ++  +  K               +      L   
Sbjct: 277 VTDFLSAATTT-HISLDHHSMTLTPDEVKSLLLKY--------------LDCRPQDLPRE 321

Query: 281 SKHTHPLVCPSSNGREETQYFPFRSWVNTRTLESNPLK 318
              T+P    S    E  +      W N + +  + L 
Sbjct: 322 VLTTNPRRL-SIIA-ESIRDGLAT-WDNWKHVNCDKLT 356

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 132 FCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSR 191
               S+ L   L      +  + C  C   FS   +LK+H+   E     C VC K+++ 
Sbjct: 56  LLDESSYLYRLLASKAISQ--FVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTS 112

Query: 192 LSDYKIHM-NMHNG 204
                 H+   HN 
Sbjct: 113 TDSALDHVCKKHNI 126

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.8 bits (87), Expect = 2e-04
 Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFK 206
           Y C+ C  R      LK+H+  H     Y C  C+  +    +   HM      K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 35.9 bits (84), Expect = 7e-04
 Identities = 13/23 (56%), Positives = 14/23 (60%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIH 175
           Y C+ C  RF  LQ LK HL IH
Sbjct: 12  YPCEICGTRFRHLQTLKSHLRIH 34

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	319
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.88
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.79
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.76
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.76
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.74
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.73
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.71
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.7
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.7
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.68
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.68
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.67
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.66
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.66
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.66
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.65
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.65
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.59
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.58
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.58
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.58
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.57
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.56
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.56
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.54
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.54
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.53
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.53
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.53
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.53
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.52
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.52
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.52
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.51
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.51
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.51
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.51
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.49
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.49
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.49
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.48
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.47
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.47
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.44
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.44
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.44
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.44
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.43
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.42
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.42
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.42
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.41
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.37
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.32
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.3
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.29
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.27
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.27
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.27
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.27
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.27
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.27
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.27
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.25
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.24
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.22
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.2
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.17
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.14
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.14
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.13
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.13
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.13
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.12
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.1
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.07
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.0
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.96
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.94
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.92
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.91
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.9
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.86
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.86
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.85
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.83
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.82
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.81
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.81
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.8
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.8
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.79
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.78
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.77
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.76
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.75
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.75
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.75
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.73
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.72
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.71
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.68
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.67
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.65
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.65
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.65
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.64
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.6
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.54
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.52
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.44
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.44
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.42
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.37
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.35
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.35
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.33
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.33
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.3
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.29
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.29
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.28
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.26
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.25
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.25
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.24
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.23
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.22
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.21
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.21
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.2
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.19
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.19
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.19
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.48
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.18
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.17
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.47
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.16
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.15
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.15
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.14
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.13
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.12
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.11
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.08
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.34
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.34
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.05
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.05
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.3
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.02
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.02
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.01
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.99
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.23
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.94
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.91
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.91
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.84
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.8
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.75
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.61
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.51
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.46
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.4
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.19
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	96.17
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.0
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.0
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.95
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.68
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.91
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.82
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.21
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.0
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	87.28
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.15
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	86.69
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	86.38
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	84.28
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	83.69
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	83.44
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	83.14
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	82.91
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	80.72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=5.7e-38  Score=250.90  Aligned_cols=178  Identities=31%  Similarity=0.561  Sum_probs=116.4

Q ss_pred             HHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC--ccccccchhhhh-HHHHHHHhhcCCCCCCCCcCccccc
Q psy7463          29 RMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG--IICRLCGEKFEK-SLMRDHLVTHIPPEHRGKVSDAFFN  105 (319)
Q Consensus        29 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~C~~C~~~f~~-~~l~~H~~~h~~~~~~~~~~~~~~~  105 (319)
                      .|..|+..+.++++|.|++|++.|.+...|..|++.|.+.  |.|+.|++.|.+ ..|..|+..|.+             
T Consensus         8 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------   74 (190)
T 2i13_A            8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG-------------   74 (190)
T ss_dssp             -----------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHC-------------
T ss_pred             cchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCC-------------
Confidence            3444444444444444444444444444444444444332  444444444444 444444444422             


Q ss_pred             hhhhHHHHHHhhhCCcccccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCc
Q psy7463         106 KKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNV  184 (319)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~  184 (319)
                                    ..+|.|+.|++.|.+...|..|+ ..|.++++ |.|+.|++.|.+...|..|+++|. +++|.|++
T Consensus        75 --------------~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  138 (190)
T 2i13_A           75 --------------EKPYKCPECGKSFSQRANLRAHQ-RTHTGEKP-YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPE  138 (190)
T ss_dssp             --------------CCCEECTTTCCEESCHHHHHHHH-HHHHTCCC-EECTTTCCEESSHHHHHHHHHHHHCCCCEECTT
T ss_pred             --------------CCCccCcccCCccCCHHHHHHHH-HhcCCCCC-CcCCCCCCccCCHHHHHHHHHHhCCCCCeECCC
Confidence                          12589999999999999999998 77888888 999999999999999999999988 88999999


Q ss_pred             hhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHHhhccccccc
Q psy7463         185 CDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQ  236 (319)
Q Consensus       185 C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~  236 (319)
                      |++.|.+...|..|+++|++. +|.|++|++.|.+...|..|++ .|.+++||
T Consensus       139 C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~k~~  190 (190)
T 2i13_A          139 CGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR-THTGKKTS  190 (190)
T ss_dssp             TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHT-TC------
T ss_pred             CCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHH-hcCCCCCC
Confidence            999999999999999999886 7999999999999999999998 78887764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=6.2e-35  Score=233.26  Aligned_cols=175  Identities=27%  Similarity=0.471  Sum_probs=140.1

Q ss_pred             HHHHHHHHHhccCC--ccccccchhhhh-HHHHHHHhhcCCCCCCCCcCccccchhhhHHHHHHhhhCCcccccCCCccc
Q psy7463          55 RIAYEEHVRLHEGG--IICRLCGEKFEK-SLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADT  131 (319)
Q Consensus        55 ~~~l~~H~~~h~~~--~~C~~C~~~f~~-~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~  131 (319)
                      ...|..|+..+.++  |.|+.|++.|.+ ..|..|++.|.+.                           .+|.|+.|++.
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------~~~~C~~C~~~   58 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGE---------------------------KPYKCPECGKS   58 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC------------------------------CCEECTTTCCE
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCC---------------------------CCccCCCcCch
Confidence            45688888888765  999999999998 8999999887542                           26999999999


Q ss_pred             cCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC-cccc
Q psy7463         132 FCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQC  209 (319)
Q Consensus       132 f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  209 (319)
                      |.+...|..|+ ..|.++++ |.|+.|++.|.+...|..|+++|. +++|.|++|++.|.+...|..|+++|++. +|.|
T Consensus        59 f~~~~~l~~H~-~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  136 (190)
T 2i13_A           59 FSDKKDLTRHQ-RTHTGEKP-YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKC  136 (190)
T ss_dssp             ESSHHHHHHHH-HHHHCCCC-EECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             hCCHHHHHHHH-HhcCCCCC-ccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeEC
Confidence            99999999998 77888888 999999999999999999999998 88999999999999999999999999886 7999


Q ss_pred             cccccccCChHHHHHHHHhhccccccccccchhhhhhhhhhHHHHHhcCC
Q psy7463         210 HICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAKVGEG  259 (319)
Q Consensus       210 ~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~~c~~~~~~~~~~~~~~~~~~  259 (319)
                      ++|++.|.+...|..|++ .|.++++|.|..|++.|..+..|..|.....
T Consensus       137 ~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  185 (190)
T 2i13_A          137 PECGKSFSREDNLHTHQR-THTGEKPYKCPECGKSFSRRDALNVHQRTHT  185 (190)
T ss_dssp             TTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHHHHTTC-
T ss_pred             CCCCcccCCHHHHHHHHH-hcCCCCCeECCCCCCccCCHHHHHHHHHhcC
Confidence            999999999999999999 8889999999999999999999999987653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=1.8e-32  Score=219.00  Aligned_cols=169  Identities=26%  Similarity=0.509  Sum_probs=145.0

Q ss_pred             cCCCCcccccc--ccchhccccHHHHHHHHHHhcCCCcccc--ccchhhccCHHHHHHHHHhccCCccccccchhhhhHH
Q psy7463           7 DLKDKVVPQKC--PLCERLYKSVYRMKEHMKKQHKGQLYEC--DCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSL   82 (319)
Q Consensus         7 ~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~   82 (319)
                      ......++|.|  +.|++.|.+...|..|++.|+++++|.|  +.|++.|.+...|..|++.|.++              
T Consensus         5 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--------------   70 (190)
T 1tf6_A            5 ALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE--------------   70 (190)
T ss_dssp             -----CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTC--------------
T ss_pred             cccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCC--------------
Confidence            34456789999  6899999999999999999999999999  88999999999999999887652              


Q ss_pred             HHHHHhhcCCCCCCCCcCccccchhhhHHHHHHhhhCCcccccC--CCccccCChhHHHHHHhHhc-CCCCccccc--cc
Q psy7463          83 MRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCN--LCADTFCPRSNMLRHYLLKH-RGDKVFYAC--DR  157 (319)
Q Consensus        83 l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H-~~~~~~~~C--~~  157 (319)
                                                            .+|.|+  .|++.|.+...|..|+...| .++.+ |.|  +.
T Consensus        71 --------------------------------------~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~-~~C~~~~  111 (190)
T 1tf6_A           71 --------------------------------------KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICV-YVCHFEN  111 (190)
T ss_dssp             --------------------------------------CCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSC-CEECSSS
T ss_pred             --------------------------------------CceeCCCCCCCCccCCHHHHHHHHHHhcCCCcce-eeCCCCC
Confidence                                                  147888  78889999999999986777 45666 899  88


Q ss_pred             cccccCChHHHHHHHHHhc-CCCCccCc--hhhccCCHHHHHHHHHhcCCCcccccc---cccccCChHHHHHHHHhhcc
Q psy7463         158 CDKRFSLLQNLKRHLAIHE-RIAYQCNV--CDKKYSRLSDYKIHMNMHNGFKYQCHI---CLKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       158 C~~~f~~~~~L~~H~~~h~-~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~---C~~~f~~~~~L~~H~~~~H~  231 (319)
                      |++.|.+...|..|+++|+ +++|.|++  |++.|.+.+.|..|+++|++  |.|+.   |++.|.+...|..|++ .|.
T Consensus       112 C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--~~C~~~~~C~~~f~~~~~l~~H~~-~h~  188 (190)
T 1tf6_A          112 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLKHVA-ECH  188 (190)
T ss_dssp             SCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--CCCCSTTTCCCCCSCHHHHHHHHT-TCC
T ss_pred             CccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--CcCCCCCcCCCccccHHHHHHHHH-hhc
Confidence            9999999999999999988 78999987  99999999999999999988  88998   9999999999999988 444

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1.6e-28  Score=196.05  Aligned_cols=163  Identities=27%  Similarity=0.472  Sum_probs=143.6

Q ss_pred             CCCcccc--ccchhhccCHHHHHHHHHhccCCccccccchhhhhHHHHHHHhhcCCCCCCCCcCccccchhhhHHHHHHh
Q psy7463          39 KGQLYEC--DCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRDHLVTHIPPEHRGKVSDAFFNKKQTALLTHYL  116 (319)
Q Consensus        39 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (319)
                      ..++|.|  +.|++.|.+...|..|++.|.++                                                
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~------------------------------------------------   40 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGE------------------------------------------------   40 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCC------------------------------------------------
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCC------------------------------------------------
Confidence            4677888  57888888888888887776541                                                


Q ss_pred             hhCCccccc--CCCccccCChhHHHHHHhHhcCCCCcccccc--ccccccCChHHHHHHH-HHhc--CCCCcc--Cchhh
Q psy7463         117 KRNGIKLQC--NLCADTFCPRSNMLRHYLLKHRGDKVFYACD--RCDKRFSLLQNLKRHL-AIHE--RIAYQC--NVCDK  187 (319)
Q Consensus       117 ~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~--~C~~~f~~~~~L~~H~-~~h~--~~~~~C--~~C~~  187 (319)
                          .+|.|  +.|++.|.+...|..|+ ..|.++++ |.|+  .|++.|.+...|..|+ +.|.  .++|.|  +.|++
T Consensus        41 ----~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k  114 (190)
T 1tf6_A           41 ----KPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKN-FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGK  114 (190)
T ss_dssp             ----CSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCC-EECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCE
T ss_pred             ----CCccCCCCCCChhhCCHHHHHHHH-HHccCCCc-eeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCcc
Confidence                25889  88999999999999998 78999998 9999  8999999999999999 5663  679999  88999


Q ss_pred             ccCCHHHHHHHHHhcCCC-cccccc--cccccCChHHHHHHHHhhccccccccccc---hhhhhhhhhhHHHHHhcCC
Q psy7463         188 KYSRLSDYKIHMNMHNGF-KYQCHI--CLKCTSRKNYLKRHIIMMHTKFEGQIGEM---EDKVGEKKIGEIEAKVGEG  259 (319)
Q Consensus       188 ~f~~~~~l~~H~~~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~c~~---c~~~~~~~~~~~~~~~~~~  259 (319)
                      .|.+...|..|+++|++. +|.|++  |++.|.+...|..|++ .|.+   |.|..   |++.|.....|..|.....
T Consensus       115 ~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          115 AFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             ECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHT-SSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             ccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHH-HhCC---CcCCCCCcCCCccccHHHHHHHHHhhc
Confidence            999999999999999987 799988  9999999999999998 7877   88999   9999999999999987543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=4.8e-27  Score=181.15  Aligned_cols=102  Identities=30%  Similarity=0.560  Sum_probs=58.9

Q ss_pred             CCCccccCChhHHHHHHhHhcCCCCccccccc--cccccCChHHHHHHHHHhc-CCCCccCc--hhhccCCHHHHHHHH-
Q psy7463         126 NLCADTFCPRSNMLRHYLLKHRGDKVFYACDR--CDKRFSLLQNLKRHLAIHE-RIAYQCNV--CDKKYSRLSDYKIHM-  199 (319)
Q Consensus       126 ~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~-~~~~~C~~--C~~~f~~~~~l~~H~-  199 (319)
                      ..|++.|.+...|..|+ ..|.++++ |.|++  |++.|.+...|..|+++|. +++|.|++  |++.|.+...|..|+ 
T Consensus        43 ~~c~~~f~~~~~l~~H~-~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  120 (155)
T 2gli_A           43 SRELRPFKAQYMLVVHM-RRHTGEKP-HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN  120 (155)
T ss_dssp             TTTTCCCSSHHHHHHHT-HHHHCCCC-CCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHH
T ss_pred             cchhhhhhhHHHHHHHH-HhcCCCCC-ccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHH
Confidence            33445555555555555 44555555 56653  6666666666666666555 55566665  666666666666665 


Q ss_pred             HhcCCC-cccccc--cccccCChHHHHHHHHhh
Q psy7463         200 NMHNGF-KYQCHI--CLKCTSRKNYLKRHIIMM  229 (319)
Q Consensus       200 ~~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~~  229 (319)
                      ++|.+. +|.|++  |++.|.+...|..|++.+
T Consensus       121 ~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h  153 (155)
T 2gli_A          121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV  153 (155)
T ss_dssp             HTTCSCCCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             HhcCCCCCeeCCCCCCccccCCHHHHHHHHHhh
Confidence            455554 466655  666666666666666533

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=1.1e-25  Score=173.57  Aligned_cols=136  Identities=21%  Similarity=0.316  Sum_probs=124.9

Q ss_pred             ccccCCCccccCChhHHHHHHhH--hcCCCCccccccc-----cccccCChHHHHHHHHHhc-CCCCccCc--hhhccCC
Q psy7463         122 KLQCNLCADTFCPRSNMLRHYLL--KHRGDKVFYACDR-----CDKRFSLLQNLKRHLAIHE-RIAYQCNV--CDKKYSR  191 (319)
Q Consensus       122 ~~~C~~C~~~f~~~~~l~~H~~~--~H~~~~~~~~C~~-----C~~~f~~~~~L~~H~~~h~-~~~~~C~~--C~~~f~~  191 (319)
                      +|.|+.|++.|.+...|..|+..  .|.++++ |.|++     |++.|.+...|..|+++|. +++|.|++  |++.|.+
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~-~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKE-FVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSC-CCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcc-eeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            58999999999999999999854  6788888 88875     3499999999999999998 88999986  9999999


Q ss_pred             HHHHHHHHHhcCCC-cccccc--cccccCChHHHHHHHHhhccccccccccc--hhhhhhhhhhHHHHHhcC
Q psy7463         192 LSDYKIHMNMHNGF-KYQCHI--CLKCTSRKNYLKRHIIMMHTKFEGQIGEM--EDKVGEKKIGEIEAKVGE  258 (319)
Q Consensus       192 ~~~l~~H~~~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~c~~--c~~~~~~~~~~~~~~~~~  258 (319)
                      ...|..|+++|++. +|.|++  |++.|.+...|..|++..|.++++|.|..  |++.|..+..|..|....
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h  153 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV  153 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhh
Confidence            99999999999986 799999  99999999999999966999999999998  999999999999998754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=4.2e-24  Score=158.15  Aligned_cols=113  Identities=27%  Similarity=0.592  Sum_probs=103.6

Q ss_pred             CcccccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHh---c-CCCCccCchhhccCCHHHH
Q psy7463         120 GIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIH---E-RIAYQCNVCDKKYSRLSDY  195 (319)
Q Consensus       120 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h---~-~~~~~C~~C~~~f~~~~~l  195 (319)
                      ..+|.|+.|++.|.+...|..|+ ..|.++++ |.|++|++.|.+...|..|++.|   . +++|.|++|++.|.+...|
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHN-RKHTGEKP-FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHH-HHHSSCCS-CBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHH-HhCCCCCC-eECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            34699999999999999999998 77988888 99999999999999999999964   3 7799999999999999999


Q ss_pred             HHHHHhcCCC-cccccccccccCChHHHHHHHHhhccccc
Q psy7463         196 KIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFE  234 (319)
Q Consensus       196 ~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  234 (319)
                      ..|+++|++. +|.|++|++.|.+...|..|++.+|.++.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            9999999987 79999999999999999999998898753

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=1.3e-24  Score=161.89  Aligned_cols=105  Identities=25%  Similarity=0.432  Sum_probs=74.6

Q ss_pred             hHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChH
Q psy7463         143 LLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKN  220 (319)
Q Consensus       143 ~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~  220 (319)
                      ..+|.|+++ |.|++|++.|.+...|..|+++|. ++||.|++|++.|.+...|..|+++|.++ ||.|++|++.|.+..
T Consensus        14 ~~~h~Gek~-y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           14 ELIVDGRVY-YICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEETTEEE-EEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             eeecCCCcC-eECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            355677776 777777777777777777777776 66777777777777777777777777665 677777777777777


Q ss_pred             HHHHHHHhhccc-----cccccccchhhhhhhh
Q psy7463         221 YLKRHIIMMHTK-----FEGQIGEMEDKVGEKK  248 (319)
Q Consensus       221 ~L~~H~~~~H~~-----~~~~~c~~c~~~~~~~  248 (319)
                      .|..|++.+|+.     .++|.|..|++.|...
T Consensus        93 ~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           93 FMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            777777755543     2457777777666544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=2.2e-23  Score=160.58  Aligned_cols=118  Identities=24%  Similarity=0.472  Sum_probs=108.5

Q ss_pred             cccccCCCccccCChhHHHHHHhHhcCCCCcc-------ccccccccccCChHHHHHHHHHhc-CCCCccCc--hhhccC
Q psy7463         121 IKLQCNLCADTFCPRSNMLRHYLLKHRGDKVF-------YACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNV--CDKKYS  190 (319)
Q Consensus       121 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~-------~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~--C~~~f~  190 (319)
                      ..|.|+.|++.|.+...|..|+...|.++.+.       |.|++|++.|.+...|..|+++|. +++|.|++  |++.|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            35999999999999999999995558776542       789999999999999999999998 88999998  999999


Q ss_pred             CHHHHHHHHHhcCCC-cccccc--cccccCChHHHHHHHHhhcccccccccc
Q psy7463         191 RLSDYKIHMNMHNGF-KYQCHI--CLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       191 ~~~~l~~H~~~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      +...|..|+++|++. +|.|++  |++.|.+...|..|++ .|.++++|.|+
T Consensus       104 ~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~~c~  154 (155)
T 2rpc_A          104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH-VHTSDKSGPSS  154 (155)
T ss_dssp             CHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSST-TTTSCCCSCSC
T ss_pred             CHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHH-HhcCCCCCCCC
Confidence            999999999999987 799997  9999999999999998 89999999885

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=4.1e-23  Score=151.65  Aligned_cols=108  Identities=36%  Similarity=0.691  Sum_probs=98.9

Q ss_pred             CcccccCC--CccccCChhHHHHHHhHhcCCCCcccccc--ccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHH
Q psy7463         120 GIKLQCNL--CADTFCPRSNMLRHYLLKHRGDKVFYACD--RCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSD  194 (319)
Q Consensus       120 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~  194 (319)
                      ..+|.|++  |++.|.+...|..|+ ..|.++++ |.|+  .|++.|.+...|..|+++|. +++|.|++|++.|.+...
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKP-YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHH-HHHHTTCC-EECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHH-HhhCCCCC-ccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            34699987  999999999999998 67888888 9999  79999999999999999998 889999999999999999


Q ss_pred             HHHHHHhcCCC-cccc--cccccccCChHHHHHHHHhhc
Q psy7463         195 YKIHMNMHNGF-KYQC--HICLKCTSRKNYLKRHIIMMH  230 (319)
Q Consensus       195 l~~H~~~h~~~-~~~C--~~C~~~f~~~~~L~~H~~~~H  230 (319)
                      |..|+++|++. +|.|  +.|++.|.+...|..|++ .|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~-~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN-MH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHH-TC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHh-cC
Confidence            99999999886 7999  889999999999999988 44

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.4e-22  Score=149.83  Aligned_cols=113  Identities=20%  Similarity=0.272  Sum_probs=102.8

Q ss_pred             CCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhc---CCC-cccccccccccCChHH
Q psy7463         147 RGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMH---NGF-KYQCHICLKCTSRKNY  221 (319)
Q Consensus       147 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h---~~~-~~~C~~C~~~f~~~~~  221 (319)
                      .++++ |.|++|++.|.+...|..|+++|. +++|.|++|++.|.+...|..|++.|   .+. +|.|++|++.|.+...
T Consensus         3 ~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            3 SGSSG-VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCSS-CCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCC-CCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            35666 999999999999999999999998 88999999999999999999999974   333 7999999999999999


Q ss_pred             HHHHHHhhccccccccccchhhhhhhhhhHHHHHhcCCCC
Q psy7463         222 LKRHIIMMHTKFEGQIGEMEDKVGEKKIGEIEAKVGEGNQ  261 (319)
Q Consensus       222 L~~H~~~~H~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~  261 (319)
                      |..|++ .|.++++|.|..|++.|..+..|..|.......
T Consensus        82 l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           82 LRLHMV-SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHH-HHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHH-HcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            999998 888999999999999999999999998754433

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.88  E-value=3.7e-23  Score=153.11  Aligned_cols=112  Identities=32%  Similarity=0.637  Sum_probs=98.4

Q ss_pred             cccccC--CCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCc--hhhccCCHHHH
Q psy7463         121 IKLQCN--LCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNV--CDKKYSRLSDY  195 (319)
Q Consensus       121 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~--C~~~f~~~~~l  195 (319)
                      .+|.|+  .|++.|.+...|..|+ ..| ++++ |.|++|++.|.+...|..|+++|. +++|.|++  |++.|.+...|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h-~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHL-HTH-GPRV-HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHH-GGG-SCCC-EECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHH-HHc-CCCC-eECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            369999  8999999999999998 678 6777 999999999999999999999998 88999986  99999999999


Q ss_pred             HHHHHhcCCC-cccccc--cccccCChHHHHHHHHhhccccccc
Q psy7463         196 KIHMNMHNGF-KYQCHI--CLKCTSRKNYLKRHIIMMHTKFEGQ  236 (319)
Q Consensus       196 ~~H~~~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~  236 (319)
                      ..|+++|++. +|.|++  |++.|.+...|..|++ .|.+++++
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~-~H~~~k~~  123 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL-THAKAKNN  123 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHH-HHC-----
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHH-HHcccccC
Confidence            9999999886 799964  9999999999999999 67776653

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=3.7e-23  Score=154.01  Aligned_cols=110  Identities=19%  Similarity=0.338  Sum_probs=97.6

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC--ccccccchhhhh-
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG--IICRLCGEKFEK-   80 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~C~~C~~~f~~-   80 (319)
                      .++.++.|+++|+|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|.++  |.|++|++.|.. 
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            46678899999999999999999999999999999999999999999999999999999999875  999999999998 


Q ss_pred             HHHHHHHhhcCCCC-CCCCcCccccchhhhHHHHHHhhhCCcccccCCCccccCCh
Q psy7463          81 SLMRDHLVTHIPPE-HRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPR  135 (319)
Q Consensus        81 ~~l~~H~~~h~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~  135 (319)
                      ..|..|++.+++.. ..+                      ..+|+|..|++.|...
T Consensus        92 ~~L~~H~~~hh~~~p~~~----------------------~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDPSGD----------------------SKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHTCCCTTSS----------------------SCCEEECCCCSSCCCC
T ss_pred             HHHHHHhHHhcCCCCCCC----------------------CCCeecCCCCchhhhc
Confidence            99999999987632 111                      1258999999988654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=1.5e-22  Score=148.68  Aligned_cols=112  Identities=28%  Similarity=0.608  Sum_probs=82.5

Q ss_pred             CCcccccccc--chhccccHHHHHHHHHHhcCCCccccc--cchhhccCHHHHHHHHHhccCCccccccchhhhhHHHHH
Q psy7463          10 DKVVPQKCPL--CERLYKSVYRMKEHMKKQHKGQLYECD--CCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFEKSLMRD   85 (319)
Q Consensus        10 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~l~~   85 (319)
                      +++++|.|++  |++.|.+...|..|++.|+++++|.|+  .|++.|.+...|..|++.|++.                 
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~-----------------   64 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV-----------------   64 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCC-----------------
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCC-----------------
Confidence            4677888886  888888888888888888888888888  6888888888888887766431                 


Q ss_pred             HHhhcCCCCCCCCcCccccchhhhHHHHHHhhhCCcccccCCCccccCChhHHHHHHhHhcCCCCccccc--cccccccC
Q psy7463          86 HLVTHIPPEHRGKVSDAFFNKKQTALLTHYLKRNGIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYAC--DRCDKRFS  163 (319)
Q Consensus        86 H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C--~~C~~~f~  163 (319)
                                                         .+|.|+.|++.|.+...|..|+ ..|.++++ |.|  +.|++.|.
T Consensus        65 -----------------------------------~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~~~C~~~f~  107 (119)
T 2jp9_A           65 -----------------------------------KPFQCKTCQRKFSRSDHLKTHT-RTHTGEKP-FSCRWPSCQKKFA  107 (119)
T ss_dssp             -----------------------------------CCEECTTTCCEESCHHHHHHHH-HHHHTCCC-EECCSTTCCCEES
T ss_pred             -----------------------------------CCccCCccCchhCCHHHHHHHH-HHhcCCCC-eeCCCCCCccccC
Confidence                                               1366777777777777777776 55666666 677  56777777


Q ss_pred             ChHHHHHHHHHh
Q psy7463         164 LLQNLKRHLAIH  175 (319)
Q Consensus       164 ~~~~L~~H~~~h  175 (319)
                      +...|..|+++|
T Consensus       108 ~~~~L~~H~~~H  119 (119)
T 2jp9_A          108 RSDELVRHHNMH  119 (119)
T ss_dssp             SHHHHHHHHHTC
T ss_pred             CHHHHHHHHhcC
Confidence            777777776654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=8.3e-22  Score=151.68  Aligned_cols=86  Identities=28%  Similarity=0.563  Sum_probs=70.0

Q ss_pred             cccCCCccccCChhHHHHHHhHhcCCCCccccccc--cccccCChHHHHHHHHHhc-CCCCccCc--hhhccCCHHHHHH
Q psy7463         123 LQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDR--CDKRFSLLQNLKRHLAIHE-RIAYQCNV--CDKKYSRLSDYKI  197 (319)
Q Consensus       123 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~-~~~~~C~~--C~~~f~~~~~l~~  197 (319)
                      |.|+.|++.|.+...|..|+ ..|.++++ |.|++  |++.|.+...|..|+++|+ +++|.|++  |++.|.+...|..
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~  140 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHI-RVHTGEKP-FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKK  140 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHT-HHHHCCCS-EECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHH
T ss_pred             cCCCCcccccCCHHHHHHHH-HhcCCCCc-ccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHH
Confidence            67888888888888888887 66777777 88887  8888888888888888887 77888886  8888888888888


Q ss_pred             HHHhcCCC-ccccc
Q psy7463         198 HMNMHNGF-KYQCH  210 (319)
Q Consensus       198 H~~~h~~~-~~~C~  210 (319)
                      |+++|+++ +|.|.
T Consensus       141 H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          141 HMHVHTSDKSGPSS  154 (155)
T ss_dssp             SSTTTTSCCCSCSC
T ss_pred             HHHHhcCCCCCCCC
Confidence            88888876 68774

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=1.6e-21  Score=144.28  Aligned_cols=54  Identities=19%  Similarity=0.520  Sum_probs=33.9

Q ss_pred             ccccccc--cchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhcc
Q psy7463          12 VVPQKCP--LCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHE   66 (319)
Q Consensus        12 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   66 (319)
                      .++|.|+  .|++.|.+...|..|++.| ++++|.|++|++.|.+...|..|++.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~   58 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT   58 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTS
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcC
Confidence            4566676  6777777777777776666 5666666666666666666666655544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=6.1e-20  Score=131.93  Aligned_cols=93  Identities=18%  Similarity=0.318  Sum_probs=85.1

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhcCCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHH
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYL  222 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L  222 (319)
                      ..|.++++ |.|++|++.|.+...|..|+++|. ++|.|++|++.|.....|..|++ |.+. +|.|++|++.|.+...|
T Consensus         9 ~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~H~-~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            9 SPVENKEV-YQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCC-CBCTTTCCBCSSHHHHHHHHHHHH-HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             cccCCCcC-eECCCCCCccCCHHHHHHHHHHCC-CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            56888888 999999999999999999999984 68999999999999999999996 8876 79999999999999999


Q ss_pred             HHHHHhhcccccccccc
Q psy7463         223 KRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       223 ~~H~~~~H~~~~~~~c~  239 (319)
                      ..|++.+|.++++|.+.
T Consensus        86 ~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCCC
Confidence            99998899998888764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=2.7e-19  Score=128.29  Aligned_cols=90  Identities=23%  Similarity=0.493  Sum_probs=74.0

Q ss_pred             CCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHH
Q psy7463         147 RGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKR  224 (319)
Q Consensus       147 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~  224 (319)
                      ..+++ |.|++|++.|.+...|..|+++|. +++|.|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|..
T Consensus        13 ~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           13 KTKKE-FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCC-CBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             CCCcC-eECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            34455 888888888888888888888887 77888888888888888888888888876 6888888888888888888


Q ss_pred             HHHhhccccccccc
Q psy7463         225 HIIMMHTKFEGQIG  238 (319)
Q Consensus       225 H~~~~H~~~~~~~c  238 (319)
                      |++ .|.++++|.+
T Consensus        92 H~~-~H~~~~~~~~  104 (106)
T 2ee8_A           92 HKT-LHMQTSSPTA  104 (106)
T ss_dssp             HHH-HTTSCCCCCC
T ss_pred             HHH-HhCCCCCCcC
Confidence            887 7777777643

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=2.8e-19  Score=125.55  Aligned_cols=86  Identities=33%  Similarity=0.587  Sum_probs=71.3

Q ss_pred             CCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCC---CcccccccccccCChHHH
Q psy7463         147 RGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNG---FKYQCHICLKCTSRKNYL  222 (319)
Q Consensus       147 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~C~~C~~~f~~~~~L  222 (319)
                      .++++ |.|++|++.|.+...|..|+++|. +++|.|++|++.|.+...|..|+++|++   .+|.|++|++.|.+...|
T Consensus         3 ~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSG-VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSC-EECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCC-eECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            34556 888888888888888888888887 7788888888888888888888888877   468898899889888899


Q ss_pred             HHHHHhhcccc
Q psy7463         223 KRHIIMMHTKF  233 (319)
Q Consensus       223 ~~H~~~~H~~~  233 (319)
                      ..|++..|.++
T Consensus        82 ~~H~~~~H~~~   92 (95)
T 2yt9_A           82 NGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHTSCCC
T ss_pred             HHHHHHhcCCC
Confidence            99987778764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=3.9e-19  Score=125.04  Aligned_cols=85  Identities=27%  Similarity=0.515  Sum_probs=60.1

Q ss_pred             CCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHH
Q psy7463         147 RGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKR  224 (319)
Q Consensus       147 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~  224 (319)
                      .++++ |.|++|++.|.+...|..|+++|. .++|.|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|..
T Consensus         4 ~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            4 GSSGP-HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCC-CCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCcC-eECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            34555 777777777777777777777776 56777777777777777777777777665 5777777777777777777


Q ss_pred             HHHhhcccc
Q psy7463         225 HIIMMHTKF  233 (319)
Q Consensus       225 H~~~~H~~~  233 (319)
                      |++ .|.++
T Consensus        83 H~~-~h~~~   90 (96)
T 2dmd_A           83 HLR-SHTGD   90 (96)
T ss_dssp             HHT-TCCSC
T ss_pred             HHH-HhcCC
Confidence            776 44443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.76  E-value=4.4e-19  Score=123.21  Aligned_cols=83  Identities=35%  Similarity=0.759  Sum_probs=63.5

Q ss_pred             CCcccccc--ccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHH
Q psy7463         149 DKVFYACD--RCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKR  224 (319)
Q Consensus       149 ~~~~~~C~--~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~  224 (319)
                      +++ |.|+  .|++.|.+...|..|+++|. .++|.|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|..
T Consensus         2 ~k~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERP-YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CC-EECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCc-eECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            445 7887  48888888888888888776 67788888888888888888888887765 6888888888888888888


Q ss_pred             HHHhhcccc
Q psy7463         225 HIIMMHTKF  233 (319)
Q Consensus       225 H~~~~H~~~  233 (319)
                      |++ .|.++
T Consensus        81 H~~-~H~~~   88 (90)
T 1a1h_A           81 HTK-IHLRQ   88 (90)
T ss_dssp             HHG-GGGC-
T ss_pred             HHH-Hhccc
Confidence            877 56554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.76  E-value=1.9e-18  Score=123.82  Aligned_cols=88  Identities=25%  Similarity=0.564  Sum_probs=81.8

Q ss_pred             CcccccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHH
Q psy7463         120 GIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIH  198 (319)
Q Consensus       120 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H  198 (319)
                      ..+|.|+.|++.|.....|..|+ ..|.++++ |.|++|++.|.....|..|+++|. +++|.|++|++.|.+...|..|
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHE-RTHTDERP-YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHH-HHHCCSCC-CBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHH-HHcCCCCC-cCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            34599999999999999999998 77999888 999999999999999999999998 8899999999999999999999


Q ss_pred             HHhcCCC-cccc
Q psy7463         199 MNMHNGF-KYQC  209 (319)
Q Consensus       199 ~~~h~~~-~~~C  209 (319)
                      +++|.+. +|.+
T Consensus        93 ~~~H~~~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQTSSPTA  104 (106)
T ss_dssp             HHHTTSCCCCCC
T ss_pred             HHHhCCCCCCcC
Confidence            9999986 5654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.76  E-value=6.5e-19  Score=120.04  Aligned_cols=75  Identities=33%  Similarity=0.646  Sum_probs=50.3

Q ss_pred             ccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHH
Q psy7463         153 YACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       153 ~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      |.|++|++.|.+...|..|+++|. +++|.|+.|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            566666666666666666666665 55666666666666666666666666654 5666666666666666666666

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.76  E-value=8e-19  Score=119.61  Aligned_cols=81  Identities=32%  Similarity=0.703  Sum_probs=76.4

Q ss_pred             ccccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHH
Q psy7463         122 KLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMN  200 (319)
Q Consensus       122 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~  200 (319)
                      +|.|+.|++.|.+...|..|+ ..|.++++ |.|+.|++.|.+...|..|+++|. +++|.|++|++.|.+.+.|..|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHL-LIHSDTRP-YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHH-HHHHTCCC-EECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHH-HHcCCCCC-eeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            489999999999999999999 67988888 999999999999999999999998 889999999999999999999999


Q ss_pred             hcCC
Q psy7463         201 MHNG  204 (319)
Q Consensus       201 ~h~~  204 (319)
                      +|+|
T Consensus        79 ~H~g   82 (82)
T 2kmk_A           79 KHTG   82 (82)
T ss_dssp             HHC-
T ss_pred             hhCC
Confidence            9975

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=2.1e-18  Score=121.25  Aligned_cols=84  Identities=26%  Similarity=0.573  Sum_probs=79.6

Q ss_pred             CcccccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHH
Q psy7463         120 GIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIH  198 (319)
Q Consensus       120 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H  198 (319)
                      ..+|.|+.|++.|.+...|..|+ ..|.++++ |.|++|++.|.+...|..|+++|. +++|.|++|++.|.+...|..|
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKP-YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHG-GGCCCCCS-EECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHH-HhcCCCCC-EeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            34699999999999999999998 78999888 999999999999999999999998 8899999999999999999999


Q ss_pred             HHhcCCC
Q psy7463         199 MNMHNGF  205 (319)
Q Consensus       199 ~~~h~~~  205 (319)
                      +++|++.
T Consensus        84 ~~~h~~~   90 (96)
T 2dmd_A           84 LRSHTGD   90 (96)
T ss_dssp             HTTCCSC
T ss_pred             HHHhcCC
Confidence            9999986

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.5e-18  Score=125.35  Aligned_cols=85  Identities=33%  Similarity=0.711  Sum_probs=79.3

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHH
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYL  222 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L  222 (319)
                      .|.++++ |.| .|++.|.+...|..|+++|. .++|.|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|
T Consensus         4 ~h~~~k~-~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKL-YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCC-EEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCC-Eec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            5788888 999 99999999999999999998 88999999999999999999999999887 79999999999999999


Q ss_pred             HHHHHhhcc
Q psy7463         223 KRHIIMMHT  231 (319)
Q Consensus       223 ~~H~~~~H~  231 (319)
                      ..|++..|.
T Consensus        82 ~~H~~~~~~   90 (110)
T 2csh_A           82 HRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHccc
Confidence            999995553

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=1.1e-19  Score=132.49  Aligned_cols=96  Identities=17%  Similarity=0.173  Sum_probs=83.9

Q ss_pred             hhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHH--hc-CCC-CccCchhhcc--CCHHHHHHHHHhcCCC-cc
Q psy7463         135 RSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAI--HE-RIA-YQCNVCDKKY--SRLSDYKIHMNMHNGF-KY  207 (319)
Q Consensus       135 ~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~--h~-~~~-~~C~~C~~~f--~~~~~l~~H~~~h~~~-~~  207 (319)
                      ...|..|+ ..|.++++ |.|++|++.|.+...|..|+++  |. .++ +.|++|++.|  .....|..|+++|.++ +|
T Consensus         4 ~~~l~~H~-~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            4 GSSGKLYG-SIFTGASK-FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCC-CCCCCCCS-EEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             chhhhhhe-eeeCCCCC-EECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            44677787 78999998 9999999999999999999998  65 444 4599999999  8999999999999986 89


Q ss_pred             cccccccccCChHHHHHHHHhhccc
Q psy7463         208 QCHICLKCTSRKNYLKRHIIMMHTK  232 (319)
Q Consensus       208 ~C~~C~~~f~~~~~L~~H~~~~H~~  232 (319)
                      .|++|++.|.+...|..|++.+|..
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCc
Confidence            9999999999999999999965544

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.74  E-value=2.5e-19  Score=123.87  Aligned_cols=81  Identities=20%  Similarity=0.449  Sum_probs=71.5

Q ss_pred             CccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCCcccccccccccCChHHHHHHHHh
Q psy7463         150 KVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIM  228 (319)
Q Consensus       150 ~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~  228 (319)
                      ++ |.|++|++.|.+...|..|+++|. +++|.|++|++.|.+...|..|+++|++.+|.|+.|++.|.+...|..|++.
T Consensus         2 k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KP-FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CC-EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC-CcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHH
Confidence            45 889999999999999999998887 7789999999999999999999999888789999999999999999999987


Q ss_pred             hcc
Q psy7463         229 MHT  231 (319)
Q Consensus       229 ~H~  231 (319)
                      .|.
T Consensus        81 ~h~   83 (88)
T 1llm_C           81 LKK   83 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.73  E-value=1.8e-18  Score=109.10  Aligned_cols=57  Identities=19%  Similarity=0.468  Sum_probs=55.4

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      ++||.|++|++.|.....|..|+++|++++||.|++|++.|.....|..|+++|+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            789999999999999999999999999999999999999999999999999999874

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.73  E-value=3.6e-18  Score=118.50  Aligned_cols=83  Identities=27%  Similarity=0.612  Sum_probs=77.7

Q ss_pred             cccccC--CCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHH
Q psy7463         121 IKLQCN--LCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKI  197 (319)
Q Consensus       121 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~  197 (319)
                      .+|.|+  .|++.|.....|..|+ ..|.++++ |.|+.|++.|.+...|..|+++|. +++|.|++|++.|.+...|..
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHI-RIHTGQKP-FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHH-HHHHCCCC-EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHH-HHhCCCCC-ccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            469998  6999999999999998 78988888 999999999999999999999998 889999999999999999999


Q ss_pred             HHHhcCCC
Q psy7463         198 HMNMHNGF  205 (319)
Q Consensus       198 H~~~h~~~  205 (319)
                      |+++|+++
T Consensus        81 H~~~H~~~   88 (90)
T 1a1h_A           81 HTKIHLRQ   88 (90)
T ss_dssp             HHGGGGC-
T ss_pred             HHHHhccc
Confidence            99999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.3e-17  Score=116.95  Aligned_cols=84  Identities=30%  Similarity=0.651  Sum_probs=77.7

Q ss_pred             CcccccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-C--CCCccCchhhccCCHHHHH
Q psy7463         120 GIKLQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-R--IAYQCNVCDKKYSRLSDYK  196 (319)
Q Consensus       120 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~--~~~~C~~C~~~f~~~~~l~  196 (319)
                      ..+|.|++|++.|.+...|..|+ ..|.++++ |.|++|++.|.+...|..|+++|+ .  ++|.|++|++.|.+...|.
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHK-LSHSGEKP-YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHH-HHSCSSCS-EECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCeECCCCCCccCChHHHHHHH-HhcCCCCC-CcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            34699999999999999999998 77999988 999999999999999999999998 4  8999999999999999999


Q ss_pred             HHHH-hcCCC
Q psy7463         197 IHMN-MHNGF  205 (319)
Q Consensus       197 ~H~~-~h~~~  205 (319)
                      .|++ +|.+.
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            9996 67764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.6e-17  Score=119.14  Aligned_cols=61  Identities=16%  Similarity=0.235  Sum_probs=43.1

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccC
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG   67 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   67 (319)
                      .+++.+.++++|.|++|++.|.....|..|++.|  +++|.|.+|++.|.....|..|++ |.+
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~   66 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCE   66 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCS
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCC
Confidence            3556677777777777777777777777777776  356777777777777777776664 543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.4e-17  Score=120.16  Aligned_cols=85  Identities=18%  Similarity=0.376  Sum_probs=80.3

Q ss_pred             cCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC--ccccccchhhhh-HHH
Q psy7463           7 DLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG--IICRLCGEKFEK-SLM   83 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~C~~C~~~f~~-~~l   83 (319)
                      ..|+++++|.| .|++.|.+...|..|++.|+++++|.|.+|++.|.+...|..|++.|++.  |.|++|++.|.. ..|
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            56889999999 99999999999999999999999999999999999999999999999876  999999999998 999


Q ss_pred             HHHHhhcCC
Q psy7463          84 RDHLVTHIP   92 (319)
Q Consensus        84 ~~H~~~h~~   92 (319)
                      ..|++.|..
T Consensus        82 ~~H~~~~~~   90 (110)
T 2csh_A           82 HRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHccc
Confidence            999998853

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.70  E-value=9.4e-18  Score=105.82  Aligned_cols=52  Identities=25%  Similarity=0.522  Sum_probs=24.0

Q ss_pred             ccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         153 YACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       153 ~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      |.|++|++.|.....|..|+++|+ ++||.|++||++|.+.+.|..|+++|+|
T Consensus         5 y~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htg   57 (60)
T 4gzn_C            5 FFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN   57 (60)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSC
T ss_pred             ccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCC
Confidence            444444444444444444444444 4444444444444444444444444444

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.68  E-value=1.3e-17  Score=115.19  Aligned_cols=80  Identities=16%  Similarity=0.343  Sum_probs=75.5

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC-ccccccchhhhh-HHHHHHHhh
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG-IICRLCGEKFEK-SLMRDHLVT   89 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~C~~C~~~f~~-~~l~~H~~~   89 (319)
                      ++||.|++|++.|.....|..|+++|++++||.|+.|++.|.....|..|++.|++. +.|+.|++.|.+ ..|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHH
Confidence            479999999999999999999999999999999999999999999999999998865 999999999998 899999887


Q ss_pred             cC
Q psy7463          90 HI   91 (319)
Q Consensus        90 h~   91 (319)
                      ++
T Consensus        81 ~h   82 (88)
T 1llm_C           81 LK   82 (88)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.68  E-value=8.9e-17  Score=113.73  Aligned_cols=75  Identities=32%  Similarity=0.664  Sum_probs=42.9

Q ss_pred             ccccc--cccccCChHHHHHHHHHhc-CCCCccC--chhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHH
Q psy7463         153 YACDR--CDKRFSLLQNLKRHLAIHE-RIAYQCN--VCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHI  226 (319)
Q Consensus       153 ~~C~~--C~~~f~~~~~L~~H~~~h~-~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~  226 (319)
                      |.|+.  |++.|.+...|..|+++|. +++|.|+  .|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|+
T Consensus        16 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   95 (100)
T 2ebt_A           16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM   95 (100)
T ss_dssp             EECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHH
T ss_pred             eEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHH
Confidence            55554  5555555555555555555 4555554  3555555555555555555554 456666666666666666665


Q ss_pred             H
Q psy7463         227 I  227 (319)
Q Consensus       227 ~  227 (319)
                      +
T Consensus        96 ~   96 (100)
T 2ebt_A           96 K   96 (100)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.67  E-value=1.9e-16  Score=112.02  Aligned_cols=82  Identities=32%  Similarity=0.698  Sum_probs=76.6

Q ss_pred             cccccCC--CccccCChhHHHHHHhHhcCCCCcccccc--ccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHH
Q psy7463         121 IKLQCNL--CADTFCPRSNMLRHYLLKHRGDKVFYACD--RCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDY  195 (319)
Q Consensus       121 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l  195 (319)
                      .+|.|..  |++.|.....|..|+ ..|.++++ |.|+  .|++.|.+...|..|+++|. +++|.|++|++.|.+...|
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKP-YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHH-HHHSCCCC-EECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHH-HHhCCCCC-eeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            3599997  999999999999999 77999888 9996  69999999999999999998 8899999999999999999


Q ss_pred             HHHHHhcCC
Q psy7463         196 KIHMNMHNG  204 (319)
Q Consensus       196 ~~H~~~h~~  204 (319)
                      ..|+++|.+
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            999999974

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.66  E-value=6.8e-17  Score=110.69  Aligned_cols=75  Identities=32%  Similarity=0.654  Sum_probs=61.4

Q ss_pred             ccc--cccccccCChHHHHHHHHHhc-CCCCccCc--hhhccCCHHHHHHHHHhcCCCcccccc---cccccCChHHHHH
Q psy7463         153 YAC--DRCDKRFSLLQNLKRHLAIHE-RIAYQCNV--CDKKYSRLSDYKIHMNMHNGFKYQCHI---CLKCTSRKNYLKR  224 (319)
Q Consensus       153 ~~C--~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~---C~~~f~~~~~L~~  224 (319)
                      |.|  +.|++.|.+...|..|+++|. +++|.|++  |++.|.+...|..|+++|++  |.|+.   |++.|.+...|..
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~~   79 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLK   79 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHHH
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHHH
Confidence            778  778888888888888888877 77888877  88888888888888888887  88888   8888888888888


Q ss_pred             HHHhh
Q psy7463         225 HIIMM  229 (319)
Q Consensus       225 H~~~~  229 (319)
                      |++.+
T Consensus        80 H~~~h   84 (85)
T 2j7j_A           80 HVAEC   84 (85)
T ss_dssp             HHHHC
T ss_pred             HHHhc
Confidence            88743

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=2.1e-17  Score=120.24  Aligned_cols=91  Identities=14%  Similarity=0.259  Sum_probs=83.1

Q ss_pred             cccccCCCCccccccccchhccccHHHHHHHHHH--hcCCCccc-cccchhhc--cCHHHHHHHHHhccCC--ccccccc
Q psy7463           3 YYESDLKDKVVPQKCPLCERLYKSVYRMKEHMKK--QHKGQLYE-CDCCTEYF--IDRIAYEEHVRLHEGG--IICRLCG   75 (319)
Q Consensus         3 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~--~~C~~C~   75 (319)
                      ..|++.|.++++|.|++|++.|.+...|..|++.  |.+++++. |.+|++.|  .....|..|++.|.++  |.|++|+
T Consensus         8 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~   87 (115)
T 2dmi_A            8 KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCG   87 (115)
T ss_dssp             CCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSC
T ss_pred             hhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCC
Confidence            3588999999999999999999999999999999  77777765 99999999  8999999999999875  9999999


Q ss_pred             hhhhh-HHHHHHHhhcCCC
Q psy7463          76 EKFEK-SLMRDHLVTHIPP   93 (319)
Q Consensus        76 ~~f~~-~~l~~H~~~h~~~   93 (319)
                      +.|.. ..|..|++.|+..
T Consensus        88 k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           88 HSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             CBCSSHHHHHHHHHHTTTT
T ss_pred             CccCCHHHHHHHHHHhCCc
Confidence            99998 9999999998763

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.66  E-value=6.1e-17  Score=111.98  Aligned_cols=75  Identities=32%  Similarity=0.668  Sum_probs=41.3

Q ss_pred             ccccc--cccccCChHHHHHHHHHhc-CCCCccC--chhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHH
Q psy7463         153 YACDR--CDKRFSLLQNLKRHLAIHE-RIAYQCN--VCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHI  226 (319)
Q Consensus       153 ~~C~~--C~~~f~~~~~L~~H~~~h~-~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~  226 (319)
                      |.|+.  |++.|.+...|..|+++|. +++|.|+  .|++.|.+...|..|+++|.+. +|.|++|++.|.+...|..|+
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   85 (89)
T 2wbs_A            6 HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHM   85 (89)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHG
T ss_pred             eeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHH
Confidence            55555  5555555555555555554 4455554  3555555555555555555544 455555555555555555555


Q ss_pred             H
Q psy7463         227 I  227 (319)
Q Consensus       227 ~  227 (319)
                      +
T Consensus        86 ~   86 (89)
T 2wbs_A           86 K   86 (89)
T ss_dssp             G
T ss_pred             H
Confidence            4

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.65  E-value=1.5e-16  Score=109.93  Aligned_cols=81  Identities=32%  Similarity=0.705  Sum_probs=75.9

Q ss_pred             cccccCC--CccccCChhHHHHHHhHhcCCCCcccccc--ccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHH
Q psy7463         121 IKLQCNL--CADTFCPRSNMLRHYLLKHRGDKVFYACD--RCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDY  195 (319)
Q Consensus       121 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l  195 (319)
                      .+|.|+.  |++.|.....|..|+ ..|.++++ |.|+  .|++.|.+...|..|+++|. +++|.|++|++.|.+.+.|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHL-RTHTGEKP-YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHH-TTSCSSCC-EECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHH-HhcCCCCC-cCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHH
Confidence            3599999  999999999999999 77999988 9997  59999999999999999998 8899999999999999999


Q ss_pred             HHHHHhcC
Q psy7463         196 KIHMNMHN  203 (319)
Q Consensus       196 ~~H~~~h~  203 (319)
                      ..|+++|.
T Consensus        82 ~~H~~~H~   89 (89)
T 2wbs_A           82 ALHMKRHF   89 (89)
T ss_dssp             HHHGGGGC
T ss_pred             HHHHHhhC
Confidence            99999884

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.65  E-value=1.2e-16  Score=109.36  Aligned_cols=77  Identities=22%  Similarity=0.416  Sum_probs=73.7

Q ss_pred             cccc--ccchhccccHHHHHHHHHHhcCCCcccccc--chhhccCHHHHHHHHHhccCCccccc---cchhhhh-HHHHH
Q psy7463          14 PQKC--PLCERLYKSVYRMKEHMKKQHKGQLYECDC--CTEYFIDRIAYEEHVRLHEGGIICRL---CGEKFEK-SLMRD   85 (319)
Q Consensus        14 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~C~~---C~~~f~~-~~l~~   85 (319)
                      ||.|  +.|++.|.....|..|+++|+++++|.|+.  |++.|.+...|..|++.|++ |.|+.   |++.|.. ..|..
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~C~~~~~C~~~f~~~~~l~~   79 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSFVGKTWTLYLK   79 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-EECCSCSSCCCEESSHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CCCCCCCCCCCccCCHHHHHH
Confidence            6899  899999999999999999999999999998  99999999999999999999 99999   9999998 99999


Q ss_pred             HHhhcC
Q psy7463          86 HLVTHI   91 (319)
Q Consensus        86 H~~~h~   91 (319)
                      |++.|+
T Consensus        80 H~~~hh   85 (85)
T 2j7j_A           80 HVAECH   85 (85)
T ss_dssp             HHHHCC
T ss_pred             HHHhcC
Confidence            998874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.8e-15  Score=103.79  Aligned_cols=76  Identities=17%  Similarity=0.334  Sum_probs=70.1

Q ss_pred             cccccCCCCccccccccchhccccHHHHHHHHHHhcCC----CccccccchhhccCHHHHHHHHHhccCC--ccccccch
Q psy7463           3 YYESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKG----QLYECDCCTEYFIDRIAYEEHVRLHEGG--IICRLCGE   76 (319)
Q Consensus         3 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~C~~C~~   76 (319)
                      ..|+++|.++++|.|++|++.|.....|..|++.++.+    ++|.|.+|++.|.....|..|++.|+++  +.|..|+.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence            35899999999999999999999999999999988875    7899999999999999999999999886  88999987


Q ss_pred             hh
Q psy7463          77 KF   78 (319)
Q Consensus        77 ~f   78 (319)
                      .|
T Consensus        84 ~~   85 (86)
T 1x6h_A           84 SS   85 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.4e-15  Score=102.56  Aligned_cols=64  Identities=28%  Similarity=0.555  Sum_probs=30.9

Q ss_pred             ccccc--cccccCChHHHHHHHH-Hhc-CCCCccCc--hhhccCCHHHHHHHHHhcCCC-ccccccccccc
Q psy7463         153 YACDR--CDKRFSLLQNLKRHLA-IHE-RIAYQCNV--CDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCT  216 (319)
Q Consensus       153 ~~C~~--C~~~f~~~~~L~~H~~-~h~-~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f  216 (319)
                      |.|..  |++.|.+...|..|++ .|. +++|.|++  |++.|.+...|..|+++|++. +|.|++|++.|
T Consensus         8 ~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             EECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             ccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            44443  5555555555555544 343 44455544  555555555555555544443 45555555444

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.7e-15  Score=100.14  Aligned_cols=64  Identities=20%  Similarity=0.435  Sum_probs=60.9

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      ++++|.++++|.|++|++.|.....|..|++.|++++||.|++|++.|.....|..|+++|+++
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            5778999999999999999999999999999999999999999999999999999999998764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=8.8e-16  Score=105.34  Aligned_cols=76  Identities=26%  Similarity=0.404  Sum_probs=50.5

Q ss_pred             HHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-C----CCCccCchhhccCCHHHHHHHHHhcCCC-ccccccc
Q psy7463         139 LRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-R----IAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHIC  212 (319)
Q Consensus       139 ~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  212 (319)
                      ..|+ .+|.++++ |.|++|++.|.....|..|++.|+ .    ++|.|++|++.|.+...|..|+++|++. ++.|..|
T Consensus         4 ~~H~-~~H~~~k~-~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            4 GSSG-RTHTGEKP-YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TCCS-TTCCCCCC-EECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             cccc-ceecCCCC-CcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            3455 56666666 677777777777777777766555 2    4677777777777777777777776665 5677766


Q ss_pred             cccc
Q psy7463         213 LKCT  216 (319)
Q Consensus       213 ~~~f  216 (319)
                      +..|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            6554

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2e-15  Score=101.79  Aligned_cols=71  Identities=21%  Similarity=0.488  Sum_probs=66.0

Q ss_pred             CCCcccccccc--chhccccHHHHHHHHH-HhcCCCcccccc--chhhccCHHHHHHHHHhccCC--ccccccchhhh
Q psy7463           9 KDKVVPQKCPL--CERLYKSVYRMKEHMK-KQHKGQLYECDC--CTEYFIDRIAYEEHVRLHEGG--IICRLCGEKFE   79 (319)
Q Consensus         9 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~--~~C~~C~~~f~   79 (319)
                      .+++++|.|+.  |++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|+++  |.|++|++.|.
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            35688999997  9999999999999999 799999999999  999999999999999999876  99999999884

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.56  E-value=1.1e-15  Score=113.52  Aligned_cols=69  Identities=20%  Similarity=0.341  Sum_probs=46.8

Q ss_pred             CChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhcCCCCccCchhhccCCHHHHHHHHHhcCCC
Q psy7463         133 CPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGF  205 (319)
Q Consensus       133 ~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  205 (319)
                      .....|..|+  .|.++++ |.|++|++.|.....|..|+++| ++||.|++|++.|.+.+.|..|+++|++.
T Consensus        58 ~~~~~l~~h~--~h~~~~~-~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           58 DESSYLYRLL--ASKAISQ-FVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTHHHHHHHH--HHHHHCS-EECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHH--HhCCCCC-eECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            3445555554  3666666 77777777777777777777776 66777777777777777777777777664

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.56  E-value=1.3e-15  Score=113.07  Aligned_cols=107  Identities=17%  Similarity=0.126  Sum_probs=79.0

Q ss_pred             cccccCCCccc--cCChhHHHHHHhHhcCCCCccccccccccccC------ChHHHHHHHHHhcCCCCccCchhhccCCH
Q psy7463         121 IKLQCNLCADT--FCPRSNMLRHYLLKHRGDKVFYACDRCDKRFS------LLQNLKRHLAIHERIAYQCNVCDKKYSRL  192 (319)
Q Consensus       121 ~~~~C~~C~~~--f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~------~~~~L~~H~~~h~~~~~~C~~C~~~f~~~  192 (319)
                      ++|.|...+..  |.....+..+.  ....++. +.|++|...|.      ....|..|++.+.++||.|++||+.|...
T Consensus        11 k~~~~~~k~~~~~~s~ee~~~~~~--l~~~~~~-~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~   87 (129)
T 2wbt_A           11 KKYLSNHKGIFIHVTLEELKRYHQ--LTPEQKR-LIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSS   87 (129)
T ss_dssp             CGGGGCSSCEEEECCHHHHHHHTT--SCHHHHH-HHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCEESSH
T ss_pred             cccccccCCeeeeecHHhhhcccc--CChhhCc-ccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcccCCH
Confidence            35777665543  33222222222  1223344 78888876655      66778888853338999999999999999


Q ss_pred             HHHHHHHHhcCCCcccccccccccCChHHHHHHHHhhcc
Q psy7463         193 SDYKIHMNMHNGFKYQCHICLKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       193 ~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~~H~  231 (319)
                      ..|..|+++| ..+|.|++|++.|.+...|..|++.+|+
T Consensus        88 ~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           88 VSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             HHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence            9999999999 6699999999999999999999995443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=9.5e-15  Score=102.04  Aligned_cols=72  Identities=17%  Similarity=0.236  Sum_probs=50.6

Q ss_pred             ccCChHHHHHHHHHhc-CCCCccCchhhcc-CCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHHhhcccc
Q psy7463         161 RFSLLQNLKRHLAIHE-RIAYQCNVCDKKY-SRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKF  233 (319)
Q Consensus       161 ~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~  233 (319)
                      .|.....|..|++.|. +++|.|+.|++.| .+...|..|+++| +. +|.|.+|++.|.....|..|+...|+++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            4556666777777666 6677777777777 7777777777777 54 6777777777777777777733367654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=9.1e-15  Score=102.13  Aligned_cols=76  Identities=22%  Similarity=0.423  Sum_probs=67.1

Q ss_pred             cccCChhHHHHHHhHhcCCCCcccccccccccc-CChHHHHHHHHHhcCCCCccCchhhccCCHHHHHHH-HHhcCCCcc
Q psy7463         130 DTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRF-SLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIH-MNMHNGFKY  207 (319)
Q Consensus       130 ~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~  207 (319)
                      ..|.....|..|+ ..|.++++ |.|++|++.| .+...|..|+++|.+++|.|.+|++.|.....|..| +++|.+.||
T Consensus        14 ~~~~~~~~~~~~~-~~~~~~~~-~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           14 PVYAAGSLEEQWY-LEIVDKGS-VSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CSSCTTCHHHHHH-HHHHHTSC-EECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCchHHHHHH-HHhcCCCC-cCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            3566777888887 66778888 9999999999 999999999999977899999999999999999999 899988764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.53  E-value=5.6e-15  Score=92.82  Aligned_cols=57  Identities=18%  Similarity=0.531  Sum_probs=51.0

Q ss_pred             CccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccC
Q psy7463          11 KVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG   67 (319)
Q Consensus        11 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   67 (319)
                      ++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.....|..|++.|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            468999999999999999999999999999999999999999999999999998863

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=7e-15  Score=98.56  Aligned_cols=67  Identities=22%  Similarity=0.414  Sum_probs=61.3

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC--ccc
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG--IIC   71 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~C   71 (319)
                      ....+.++++|.|++|++.|.....|..|++.|+++++|.|++|++.|.....|..|+++|+++  |.|
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3456678899999999999999999999999999999999999999999999999999999875  554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=7.3e-15  Score=99.52  Aligned_cols=61  Identities=21%  Similarity=0.504  Sum_probs=55.6

Q ss_pred             cCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHH-hccC
Q psy7463           7 DLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVR-LHEG   67 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~   67 (319)
                      ..+...++|.|++|++.|.+...|.+|+++|++++||.|++|++.|.....|.+|++ .|.+
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            455667899999999999999999999999999999999999999999999999975 4654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=7.6e-15  Score=99.43  Aligned_cols=58  Identities=19%  Similarity=0.355  Sum_probs=47.2

Q ss_pred             CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHHhhccccc
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFE  234 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  234 (319)
                      .++|.|++||+.|.+...|..|+++|+++ ||.|++|++.|.+...|.+|++.+|+++.
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            56788888888888888888888888776 78888888888888888888877887653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=9.3e-15  Score=95.99  Aligned_cols=62  Identities=16%  Similarity=0.345  Sum_probs=58.7

Q ss_pred             CCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCCc
Q psy7463           8 LKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGI   69 (319)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   69 (319)
                      .+.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.....|..|++.|+++-
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            56789999999999999999999999999999999999999999999999999999998753

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=2.8e-15  Score=105.48  Aligned_cols=74  Identities=18%  Similarity=0.168  Sum_probs=61.1

Q ss_pred             ccCChHHHHHHHHHhc-CCCCccCchhhccC-CHHHHHHHHHhcCC-C-cccccccccccCChHHHHHHHHhhcccccc
Q psy7463         161 RFSLLQNLKRHLAIHE-RIAYQCNVCDKKYS-RLSDYKIHMNMHNG-F-KYQCHICLKCTSRKNYLKRHIIMMHTKFEG  235 (319)
Q Consensus       161 ~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  235 (319)
                      .+.....+..|+++|. +++|.|++|++.|. ....|..|+++|++ . +|.|.+|++.|.+...|..|++ .|.++++
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~-~h~~~kp   82 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM-AEHSAKP   82 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHH-HHSCSCS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHH-HHcCCCC
Confidence            3455566778888887 78999999999999 99999999999887 4 7999999999999999999998 4445444

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=3.4e-15  Score=105.06  Aligned_cols=67  Identities=16%  Similarity=0.329  Sum_probs=56.9

Q ss_pred             ccccccCCCCccccccccchhccc-cHHHHHHHHHHhcC-CCccccccchhhccCHHHHHHHHHhccCC
Q psy7463           2 RYYESDLKDKVVPQKCPLCERLYK-SVYRMKEHMKKQHK-GQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus         2 r~~~~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      +..|++.|.++++|.|++|++.|. ....|..|+++|++ +++|.|.+|++.|.....|..|++.|+++
T Consensus        12 ~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             HHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            345788888888888888888888 88888888888888 88888888888888888888888888764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.2e-14  Score=97.36  Aligned_cols=61  Identities=33%  Similarity=0.549  Sum_probs=37.7

Q ss_pred             CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      +++|.|++|++.|.....|..|+++|.+. +|.|++|++.|.....|..|++ .|.++++|.|
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~p~~C   77 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR-VHTGSGPSSG   77 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG-GSCCCCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH-HhCCCCCCCC
Confidence            45566666666666666666666666554 5666666666666666666665 5666666554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=2.3e-15  Score=100.95  Aligned_cols=67  Identities=22%  Similarity=0.453  Sum_probs=47.4

Q ss_pred             HHHHHHhc-CCCCccCchhhccCCHHHHHHHHH-hcCC--CcccccccccccCChHHHHHHHHhhcccccc
Q psy7463         169 KRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMN-MHNG--FKYQCHICLKCTSRKNYLKRHIIMMHTKFEG  235 (319)
Q Consensus       169 ~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~-~h~~--~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  235 (319)
                      .+|+++|. +++|.|++|++.|.+...|..|++ .|.+  .+|.|++|++.|.+...|..|++.+|..+.|
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            34666666 667777777777777777777776 4554  3677777777777777777777766766544

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=2.1e-14  Score=96.23  Aligned_cols=65  Identities=17%  Similarity=0.350  Sum_probs=59.6

Q ss_pred             cccccCCCCccccccccchhccccHHHHHHHHH-HhcCC-CccccccchhhccCHHHHHHHHHhccC
Q psy7463           3 YYESDLKDKVVPQKCPLCERLYKSVYRMKEHMK-KQHKG-QLYECDCCTEYFIDRIAYEEHVRLHEG   67 (319)
Q Consensus         3 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~   67 (319)
                      ..|++.|.+++||.|++|++.|.+...|..|++ .|.++ ++|.|++|++.|.....|..|++.+++
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            358999999999999999999999999999998 56664 899999999999999999999998765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.51  E-value=2.1e-14  Score=95.43  Aligned_cols=62  Identities=21%  Similarity=0.483  Sum_probs=58.0

Q ss_pred             cCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463           7 DLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      ..+.++++|.|+.|++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++|+++
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence            35677899999999999999999999999999999999999999999999999999999874

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=9.8e-15  Score=94.70  Aligned_cols=62  Identities=19%  Similarity=0.453  Sum_probs=56.6

Q ss_pred             ccCCCCccccccccchhccccHHHHHHHHHH-h-cCCCccccccchhhccCHHHHHHHHHhccC
Q psy7463           6 SDLKDKVVPQKCPLCERLYKSVYRMKEHMKK-Q-HKGQLYECDCCTEYFIDRIAYEEHVRLHEG   67 (319)
Q Consensus         6 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   67 (319)
                      ++.|.+++||.|+.|++.|.+...|..|++. | .+++||.|+.|++.|.....|..|++.+++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3567789999999999999999999999998 6 588999999999999999999999998875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.9e-14  Score=101.12  Aligned_cols=70  Identities=17%  Similarity=0.221  Sum_probs=63.1

Q ss_pred             ccCCCCccccccccchhccccHHHHHHHHH-Hh---cCCCccccccchhhccCHHHHHHH-HHhccCC--ccccccc
Q psy7463           6 SDLKDKVVPQKCPLCERLYKSVYRMKEHMK-KQ---HKGQLYECDCCTEYFIDRIAYEEH-VRLHEGG--IICRLCG   75 (319)
Q Consensus         6 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~--~~C~~C~   75 (319)
                      ++..++++||.|+.|++.|.....|..|++ .|   .+++||.|++|++.|.....|..| +++|.++  |.|.++.
T Consensus        10 ~~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             TTCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             cccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            456788999999999999999999999998 58   568999999999999999999999 8999876  8888754

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.7e-14  Score=95.32  Aligned_cols=60  Identities=33%  Similarity=0.592  Sum_probs=33.1

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF  205 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  205 (319)
                      +|.++++ |.|++|++.|.....|..|+++|. +++|.|++|++.|.+...|..|+++|++.
T Consensus         8 ~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            8 IHSGEKP-YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTTCCC-EECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             ccCCCCC-ccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            3555555 555555555555555555555555 45555555555555555555555555443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.48  E-value=4.1e-14  Score=88.80  Aligned_cols=55  Identities=18%  Similarity=0.370  Sum_probs=52.8

Q ss_pred             ccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      ||.|++|++.|.....|..|+++|+++++|.|+.|++.|.+...|..|+++|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            6999999999999999999999999999999999999999999999999998764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.7e-14  Score=101.35  Aligned_cols=65  Identities=25%  Similarity=0.342  Sum_probs=40.1

Q ss_pred             CCCCccCchhhccCCHHHHHHHHH-hc---CCC-cccccccccccCChHHHHHHHHhhccccccccccch
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHMN-MH---NGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEME  241 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~~c  241 (319)
                      ++||.|+.|++.|..++.|..|++ +|   .+. ||.|.+|++.|.+...|..|+...|+++++|.|..+
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            456666666666666666666665 35   222 566666666666666666663226666666666654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.47  E-value=4.6e-14  Score=93.72  Aligned_cols=58  Identities=26%  Similarity=0.539  Sum_probs=29.2

Q ss_pred             CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHHhhcccccc
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEG  235 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  235 (319)
                      +++|.|+.|++.|.+...|..|+++|.+. +|+|++|++.|.+...|..|++ .|.++++
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp   73 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR-IHSGEKP   73 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHH-HHCCSCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHH-hcCCCCC
Confidence            34455555555555555555555555443 4555555555555555555554 4444443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=4.4e-14  Score=91.54  Aligned_cols=60  Identities=23%  Similarity=0.643  Sum_probs=33.7

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHH-h-c-CCCCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAI-H-E-RIAYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~-h-~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      .+|.++++ |.|+.|++.|.+...|..|+++ | . +++|.|++|++.|.+.+.|..|+++|++
T Consensus         3 ~~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHT-YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTE-EECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcc-eECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            34555555 5666666666666666666555 4 2 4555555555555555555555555543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1e-13  Score=87.96  Aligned_cols=56  Identities=27%  Similarity=0.626  Sum_probs=46.2

Q ss_pred             CCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHHhhcccc
Q psy7463         178 IAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKF  233 (319)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~  233 (319)
                      +||.|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|++..|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            4788888888888888888888888876 6888888888888888888876577653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1e-13  Score=91.75  Aligned_cols=63  Identities=21%  Similarity=0.497  Sum_probs=58.1

Q ss_pred             ccccCCCCccccccc--cchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhcc
Q psy7463           4 YESDLKDKVVPQKCP--LCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHE   66 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   66 (319)
                      .....+.++++|.|+  .|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|+
T Consensus         9 ~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            9 LLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             TTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             hhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            345677889999997  599999999999999999999999999999999999999999999874

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.44  E-value=7.7e-14  Score=87.52  Aligned_cols=52  Identities=25%  Similarity=0.534  Sum_probs=28.9

Q ss_pred             CCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHHhh
Q psy7463         178 IAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMM  229 (319)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~  229 (319)
                      ++|.|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|++.+
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH   55 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHh
Confidence            3555555555555555555555555544 456666666666666666665533

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=1e-13  Score=93.07  Aligned_cols=60  Identities=13%  Similarity=0.259  Sum_probs=54.9

Q ss_pred             CCCCccccccccchhccccHHHHHHHHHHhcC---CCccccccchhhccCHHHHHHHHHhccC
Q psy7463           8 LKDKVVPQKCPLCERLYKSVYRMKEHMKKQHK---GQLYECDCCTEYFIDRIAYEEHVRLHEG   67 (319)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~   67 (319)
                      .|+++++|.|++|++.|.....|..|+++|++   +++|.|.+|++.|.....|..|++.++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            36789999999999999999999999999996   8999999999999999999999965543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=8.1e-14  Score=91.44  Aligned_cols=51  Identities=22%  Similarity=0.431  Sum_probs=30.2

Q ss_pred             CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHH
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      +++|.|++|++.|.+...|..|+++|.+. +|.|++|++.|.+...|..|++
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~   58 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK   58 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHH
Confidence            44556666666666666666666555554 4666666666666666666655

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.2e-13  Score=87.61  Aligned_cols=56  Identities=23%  Similarity=0.558  Sum_probs=52.1

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHH-HhccCC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHV-RLHEGG   68 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~   68 (319)
                      +||.|++|++.|.....|..|+++|+++++|.|++|++.|.+...|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999999999999999999999997 567653

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.42  E-value=2.4e-13  Score=85.20  Aligned_cols=53  Identities=25%  Similarity=0.515  Sum_probs=36.5

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHHhhccc
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTK  232 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~  232 (319)
                      ||.|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|++ .|.+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK-SKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHH-SSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHH-Hhcc
Confidence            466777777777777777777777665 5777777777777777777776 4433

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.2e-13  Score=92.71  Aligned_cols=59  Identities=17%  Similarity=0.366  Sum_probs=47.3

Q ss_pred             CCCCccCchhhccCCHHHHHHHHHhcCC----CcccccccccccCChHHHHHHHHhhcccccc
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHMNMHNG----FKYQCHICLKCTSRKNYLKRHIIMMHTKFEG  235 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~----~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  235 (319)
                      +++|.|++|++.|.....|..|+++|++    .+|.|++|++.|.+...|..|++.+|.++.+
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            6778888888888888888888888774    4788888888888888888888778877654

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=1.6e-13  Score=90.81  Aligned_cols=66  Identities=32%  Similarity=0.634  Sum_probs=47.6

Q ss_pred             HHHHHHhHhcCCCCcccccc--ccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcC
Q psy7463         137 NMLRHYLLKHRGDKVFYACD--RCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       137 ~l~~H~~~~H~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~  203 (319)
                      .|..|+...|.++++ |.|+  .|++.|.....|..|+++|. +++|.|++|++.|.....|..|+++|+
T Consensus         5 ~~~~~~~~~~~~~~~-~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRP-YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ---CTTSCCCCCCCC-EECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccchhhccCCCCCc-cCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            344555566777777 7886  48888888888888887776 677888888888888888888877763

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=3.7e-15  Score=98.77  Aligned_cols=70  Identities=19%  Similarity=0.249  Sum_probs=56.0

Q ss_pred             hhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhcCCCCccCchhhccCCHHHHHHHHHhcCCC-ccccccc
Q psy7463         135 RSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHIC  212 (319)
Q Consensus       135 ~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  212 (319)
                      ...|..|+ ..|.++++ |.|++|++.|.....|..      +++|.|++|++.|.+...|..|+++|++. +|.|++|
T Consensus         3 ~~~l~~H~-~~h~~~~~-~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQ-KIHLGDRS-QKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCC-CCCCCCSE-EECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHH-HHhCCCCC-eeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            34566676 67888888 888888888888877766      67888888888888888888888888876 6888877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1.5e-12  Score=76.84  Aligned_cols=44  Identities=16%  Similarity=0.187  Sum_probs=42.4

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      |++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.4e-12  Score=77.74  Aligned_cols=45  Identities=13%  Similarity=0.218  Sum_probs=43.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.31  E-value=1.9e-12  Score=77.18  Aligned_cols=45  Identities=9%  Similarity=0.166  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.7e-12  Score=77.36  Aligned_cols=45  Identities=11%  Similarity=0.163  Sum_probs=43.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.30  E-value=1.5e-12  Score=77.66  Aligned_cols=45  Identities=13%  Similarity=0.109  Sum_probs=43.5

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.9e-12  Score=77.18  Aligned_cols=45  Identities=7%  Similarity=0.039  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.4e-12  Score=76.73  Aligned_cols=45  Identities=16%  Similarity=0.166  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.4e-12  Score=77.78  Aligned_cols=45  Identities=9%  Similarity=0.140  Sum_probs=43.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.2e-12  Score=76.86  Aligned_cols=45  Identities=13%  Similarity=0.188  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.2e-12  Score=76.91  Aligned_cols=45  Identities=11%  Similarity=0.220  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.1e-12  Score=76.93  Aligned_cols=45  Identities=13%  Similarity=0.182  Sum_probs=43.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.9e-12  Score=77.13  Aligned_cols=45  Identities=11%  Similarity=0.161  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.8e-12  Score=77.28  Aligned_cols=45  Identities=9%  Similarity=0.122  Sum_probs=43.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.1e-12  Score=76.94  Aligned_cols=45  Identities=13%  Similarity=0.144  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.5e-12  Score=77.58  Aligned_cols=45  Identities=11%  Similarity=0.187  Sum_probs=43.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.9e-12  Score=77.14  Aligned_cols=45  Identities=11%  Similarity=0.129  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.7e-12  Score=77.32  Aligned_cols=45  Identities=9%  Similarity=0.171  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2e-12  Score=77.07  Aligned_cols=45  Identities=9%  Similarity=0.183  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.6e-12  Score=77.48  Aligned_cols=45  Identities=11%  Similarity=0.153  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.8e-12  Score=77.24  Aligned_cols=45  Identities=9%  Similarity=0.129  Sum_probs=43.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.1e-12  Score=76.93  Aligned_cols=45  Identities=11%  Similarity=0.196  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.3e-12  Score=76.79  Aligned_cols=45  Identities=11%  Similarity=0.123  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578999999999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2e-12  Score=77.09  Aligned_cols=45  Identities=11%  Similarity=0.170  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.4e-12  Score=76.71  Aligned_cols=45  Identities=9%  Similarity=0.132  Sum_probs=43.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.28  E-value=1.9e-12  Score=77.10  Aligned_cols=45  Identities=11%  Similarity=0.143  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2e-12  Score=77.03  Aligned_cols=45  Identities=13%  Similarity=0.160  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.5e-12  Score=77.57  Aligned_cols=45  Identities=9%  Similarity=0.059  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.28  E-value=1.8e-12  Score=77.22  Aligned_cols=45  Identities=9%  Similarity=0.056  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            588999999999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.7e-12  Score=76.45  Aligned_cols=45  Identities=11%  Similarity=0.115  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            578999999999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.9e-12  Score=77.13  Aligned_cols=45  Identities=11%  Similarity=0.164  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.2e-12  Score=76.90  Aligned_cols=45  Identities=13%  Similarity=0.160  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.4e-12  Score=76.69  Aligned_cols=45  Identities=11%  Similarity=0.123  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.27  E-value=1.8e-12  Score=77.22  Aligned_cols=45  Identities=11%  Similarity=0.155  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.5e-12  Score=76.64  Aligned_cols=45  Identities=9%  Similarity=0.112  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.2e-12  Score=76.85  Aligned_cols=45  Identities=11%  Similarity=0.194  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.2e-12  Score=76.16  Aligned_cols=45  Identities=9%  Similarity=0.110  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            578999999999999999999999999999999999999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.27  E-value=4.7e-12  Score=88.26  Aligned_cols=59  Identities=25%  Similarity=0.322  Sum_probs=31.0

Q ss_pred             CccCchhhccCCHHHHHHHHHh-cCCC-c--------ccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNM-HNGF-K--------YQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~-h~~~-~--------~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |.|+.|++.|.+...|..|+++ |.+. +        |.|++|++.|.+...|..|++ .|+++++|.|.
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHH-HHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHH-hcCCCCCCCCC
Confidence            3444444444444444444444 3333 2        566666666666666666655 55555666553

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.9e-12  Score=76.32  Aligned_cols=45  Identities=18%  Similarity=0.209  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            578999999999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=2.1e-12  Score=76.98  Aligned_cols=45  Identities=11%  Similarity=0.075  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.9e-12  Score=77.15  Aligned_cols=45  Identities=13%  Similarity=0.237  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.27  E-value=2.7e-12  Score=76.46  Aligned_cols=45  Identities=18%  Similarity=0.293  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578999999999999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.27  E-value=4.1e-12  Score=83.66  Aligned_cols=60  Identities=18%  Similarity=0.419  Sum_probs=54.7

Q ss_pred             ccCCCCcccccccc--chhccccHHHHHHHHHHhcCCCcccccc--chhhccCHHHHHHHHHhc
Q psy7463           6 SDLKDKVVPQKCPL--CERLYKSVYRMKEHMKKQHKGQLYECDC--CTEYFIDRIAYEEHVRLH   65 (319)
Q Consensus         6 ~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h   65 (319)
                      .......++|.|++  |++.|.....|..|++.|++++||.|.+  |++.|.....|..|+++|
T Consensus         9 ~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A            9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34556788999998  9999999999999999999999999975  999999999999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.8e-12  Score=83.76  Aligned_cols=58  Identities=14%  Similarity=0.205  Sum_probs=53.5

Q ss_pred             CCCCccccccccchhccccHHHHHHHHHHhcCCCccccc-cchhhccCHHHHHHHHHhccC
Q psy7463           8 LKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD-CCTEYFIDRIAYEEHVRLHEG   67 (319)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~   67 (319)
                      ..-+.+||.|+.|++.|. ...|..|+++ ++++||.|+ .|++.|.....|..|+++|-.
T Consensus         4 ~~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            4 GSSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             SCCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             ccCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            356788999999999999 9999999999 999999999 999999999999999998754

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.26  E-value=2.3e-12  Score=76.74  Aligned_cols=45  Identities=9%  Similarity=0.127  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.3e-12  Score=76.79  Aligned_cols=45  Identities=11%  Similarity=0.171  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=2.4e-12  Score=76.68  Aligned_cols=45  Identities=7%  Similarity=0.095  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.3e-12  Score=76.81  Aligned_cols=45  Identities=18%  Similarity=0.236  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.25  E-value=6.2e-12  Score=87.63  Aligned_cols=58  Identities=21%  Similarity=0.352  Sum_probs=40.4

Q ss_pred             ccccccccccCChHHHHHHHHH-hc-CCC--------CccCchhhccCCHHHHHHHHHhcCCC-ccccc
Q psy7463         153 YACDRCDKRFSLLQNLKRHLAI-HE-RIA--------YQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCH  210 (319)
Q Consensus       153 ~~C~~C~~~f~~~~~L~~H~~~-h~-~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  210 (319)
                      |.|+.|++.|.+...|..|+++ |. +++        |.|++|++.|.+...|..|+++|+++ +|.|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5566666666666666666665 54 333        77777888888777788887777765 67775

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6.1e-12  Score=74.89  Aligned_cols=45  Identities=11%  Similarity=0.217  Sum_probs=43.0

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999875

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.6e-12  Score=75.89  Aligned_cols=45  Identities=11%  Similarity=0.148  Sum_probs=42.8

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999875

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.8e-12  Score=77.27  Aligned_cols=45  Identities=13%  Similarity=0.193  Sum_probs=43.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.8e-12  Score=75.72  Aligned_cols=45  Identities=9%  Similarity=0.102  Sum_probs=43.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHH-HhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMK-KQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C   48 (319)
                      .|++.|.+++||.|++|++.|.....|..|++ +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            58899999999999999999999999999999 9999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.22  E-value=7.1e-12  Score=77.42  Aligned_cols=49  Identities=12%  Similarity=0.194  Sum_probs=45.3

Q ss_pred             ccCCCCccccccccchhccccHHHHHHHHH-HhcCCCccccccchhhccC
Q psy7463           6 SDLKDKVVPQKCPLCERLYKSVYRMKEHMK-KQHKGQLYECDCCTEYFID   54 (319)
Q Consensus         6 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~   54 (319)
                      ...+.+++||.|++|++.|.....|..|++ +|++++||.|++|++.|.+
T Consensus         4 ~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            4 GSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            456788999999999999999999999997 8999999999999999975

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.2e-11  Score=73.58  Aligned_cols=44  Identities=11%  Similarity=0.158  Sum_probs=42.0

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999974

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.7e-13  Score=90.62  Aligned_cols=65  Identities=12%  Similarity=0.109  Sum_probs=59.3

Q ss_pred             cccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC--cccccc
Q psy7463           3 YYESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG--IICRLC   74 (319)
Q Consensus         3 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~C~~C   74 (319)
                      ..|++.|.++++|.|++|++.|.....|..       +++|.|+.|++.|.....|..|+++|+++  |.|++|
T Consensus         7 ~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            7 GKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            358899999999999999999999988887       78999999999999999999999999876  888877

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=73.13  Aligned_cols=44  Identities=11%  Similarity=0.243  Sum_probs=41.9

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.18  E-value=1.6e-11  Score=73.06  Aligned_cols=44  Identities=9%  Similarity=0.159  Sum_probs=41.8

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.8e-11  Score=72.82  Aligned_cols=44  Identities=11%  Similarity=0.174  Sum_probs=41.8

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.1e-11  Score=73.72  Aligned_cols=45  Identities=11%  Similarity=0.177  Sum_probs=42.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .+++.|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 s~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            357889999999999999999999999999999999999999987

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=1.6e-11  Score=72.62  Aligned_cols=43  Identities=19%  Similarity=0.274  Sum_probs=40.9

Q ss_pred             cCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccch
Q psy7463           7 DLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCT   49 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   49 (319)
                      ..|++++||.|++|++.|.....|..|+++|+++++|.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            5788999999999999999999999999999999999999996

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1e-11  Score=73.91  Aligned_cols=44  Identities=14%  Similarity=0.329  Sum_probs=41.9

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46789999999999999999999999999999999999999987

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.4e-11  Score=72.22  Aligned_cols=44  Identities=9%  Similarity=0.103  Sum_probs=41.8

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57899999999999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.7e-11  Score=72.94  Aligned_cols=44  Identities=11%  Similarity=0.160  Sum_probs=41.8

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.17  E-value=1.6e-11  Score=71.47  Aligned_cols=42  Identities=12%  Similarity=0.195  Sum_probs=39.8

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      |++.|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            678899999999999999999999999999999999999985

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.5e-11  Score=70.61  Aligned_cols=42  Identities=17%  Similarity=0.222  Sum_probs=39.8

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      |++.|.+++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            678899999999999999999999999999999999999984

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.1e-11  Score=72.53  Aligned_cols=44  Identities=11%  Similarity=0.187  Sum_probs=41.8

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2e-11  Score=72.61  Aligned_cols=44  Identities=9%  Similarity=0.138  Sum_probs=41.8

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2e-11  Score=72.64  Aligned_cols=44  Identities=9%  Similarity=0.125  Sum_probs=41.8

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2e-11  Score=72.60  Aligned_cols=44  Identities=9%  Similarity=0.191  Sum_probs=41.6

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47899999999999999999999999999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.7e-11  Score=72.02  Aligned_cols=43  Identities=9%  Similarity=0.214  Sum_probs=41.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999999999999999999999999999996

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.9e-11  Score=72.69  Aligned_cols=44  Identities=11%  Similarity=0.129  Sum_probs=41.7

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.4e-11  Score=72.25  Aligned_cols=44  Identities=11%  Similarity=0.275  Sum_probs=41.7

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999973

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.1e-11  Score=72.49  Aligned_cols=44  Identities=7%  Similarity=0.082  Sum_probs=41.8

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.9e-11  Score=72.72  Aligned_cols=44  Identities=7%  Similarity=0.068  Sum_probs=41.7

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.8e-11  Score=72.75  Aligned_cols=44  Identities=11%  Similarity=0.170  Sum_probs=41.7

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3e-11  Score=71.85  Aligned_cols=44  Identities=11%  Similarity=0.166  Sum_probs=41.6

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999973

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.9e-11  Score=71.13  Aligned_cols=43  Identities=9%  Similarity=0.191  Sum_probs=40.9

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999999985

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.3e-11  Score=72.34  Aligned_cols=44  Identities=11%  Similarity=0.174  Sum_probs=41.7

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.5e-11  Score=72.21  Aligned_cols=44  Identities=9%  Similarity=0.170  Sum_probs=41.5

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.1e-11  Score=72.50  Aligned_cols=44  Identities=9%  Similarity=0.193  Sum_probs=41.6

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.14  E-value=1.6e-11  Score=73.79  Aligned_cols=44  Identities=14%  Similarity=0.397  Sum_probs=41.0

Q ss_pred             cCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchh
Q psy7463           7 DLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTE   50 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   50 (319)
                      ..+.++++|.|++|++.|.....|..|+++|++++||.|++|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            45778899999999999999999999999999999999999985

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.9e-11  Score=72.66  Aligned_cols=44  Identities=11%  Similarity=0.223  Sum_probs=41.6

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            47899999999999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.4e-11  Score=72.23  Aligned_cols=44  Identities=9%  Similarity=0.181  Sum_probs=41.7

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.2e-11  Score=72.43  Aligned_cols=44  Identities=9%  Similarity=0.125  Sum_probs=41.7

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            58899999999999999999999999999999999999999974

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.6e-11  Score=79.29  Aligned_cols=49  Identities=18%  Similarity=0.329  Sum_probs=27.8

Q ss_pred             CCCCccCchhhccCCHHHHHHHHHhcCCC-ccccc-ccccccCChHHHHHHHH
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCH-ICLKCTSRKNYLKRHII  227 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~-~C~~~f~~~~~L~~H~~  227 (319)
                      .+||.|+.|++.|. .+.|..|+++ .+. ||.|+ .|++.|..++.|..|++
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~   58 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLK   58 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHH
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHH
Confidence            34555555555555 5555555555 433 45665 56666655556666655

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.2e-11  Score=71.66  Aligned_cols=43  Identities=12%  Similarity=0.175  Sum_probs=40.9

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999999999999999999999999999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.6e-11  Score=71.34  Aligned_cols=43  Identities=12%  Similarity=0.172  Sum_probs=40.9

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5889999999999999999999999999999999999999985

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.9e-11  Score=71.89  Aligned_cols=44  Identities=11%  Similarity=0.192  Sum_probs=41.7

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999973

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3.2e-11  Score=70.92  Aligned_cols=43  Identities=14%  Similarity=0.266  Sum_probs=40.8

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5889999999999999999999999999999999999999984

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.13  E-value=4e-11  Score=69.70  Aligned_cols=41  Identities=12%  Similarity=0.171  Sum_probs=39.4

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccc
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYEC   45 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   45 (319)
                      |+++|.+++||.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            67899999999999999999999999999999999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=2.9e-11  Score=71.15  Aligned_cols=43  Identities=9%  Similarity=0.122  Sum_probs=41.0

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5889999999999999999999999999999999999999985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.9e-11  Score=70.32  Aligned_cols=41  Identities=17%  Similarity=0.246  Sum_probs=39.5

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccc
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYEC   45 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   45 (319)
                      |+++|.+++||.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3e-11  Score=71.79  Aligned_cols=43  Identities=9%  Similarity=0.164  Sum_probs=41.2

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999999996

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=3.2e-11  Score=70.16  Aligned_cols=41  Identities=15%  Similarity=0.323  Sum_probs=39.2

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccc
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYEC   45 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   45 (319)
                      |++.|.+++||.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67889999999999999999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.9e-11  Score=71.32  Aligned_cols=44  Identities=9%  Similarity=0.136  Sum_probs=41.6

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999963

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=6.2e-11  Score=69.68  Aligned_cols=43  Identities=9%  Similarity=0.162  Sum_probs=40.6

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4788999999999999999999999999999999999999985

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.7e-11  Score=70.49  Aligned_cols=41  Identities=12%  Similarity=0.220  Sum_probs=39.2

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccc
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYEC   45 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   45 (319)
                      |+++|.+++||.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            78899999999999999999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=3.4e-11  Score=71.57  Aligned_cols=44  Identities=14%  Similarity=0.172  Sum_probs=41.6

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcC-CCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHK-GQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~   47 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++ ++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999 99999974

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.09  E-value=6.1e-11  Score=77.90  Aligned_cols=48  Identities=23%  Similarity=0.607  Sum_probs=21.0

Q ss_pred             ccccc--cccccCChHHHHHHHHHhc-CCCCccCc--hhhccCCHHHHHHHHH
Q psy7463         153 YACDR--CDKRFSLLQNLKRHLAIHE-RIAYQCNV--CDKKYSRLSDYKIHMN  200 (319)
Q Consensus       153 ~~C~~--C~~~f~~~~~L~~H~~~h~-~~~~~C~~--C~~~f~~~~~l~~H~~  200 (319)
                      |.|+.  |++.|.....|..|+++|. +++|.|++  |++.|.....|..|++
T Consensus        18 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             EECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             eeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            44444  4444444444444444443 34444432  4444444444444443

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4e-11  Score=71.28  Aligned_cols=44  Identities=9%  Similarity=0.219  Sum_probs=41.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999963

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=9.8e-11  Score=69.53  Aligned_cols=43  Identities=7%  Similarity=0.155  Sum_probs=40.4

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            5778999999999999999999999999999999999999974

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.8e-11  Score=70.59  Aligned_cols=43  Identities=9%  Similarity=0.250  Sum_probs=40.9

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999999984

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.07  E-value=1.1e-10  Score=68.25  Aligned_cols=42  Identities=14%  Similarity=0.131  Sum_probs=39.0

Q ss_pred             ccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           6 SDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         6 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .+.|.++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            2 SSGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            357889999999999999999999999999999999999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.3e-11  Score=70.76  Aligned_cols=45  Identities=9%  Similarity=0.081  Sum_probs=42.5

Q ss_pred             ccccCCCCccccccc--cchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           4 YESDLKDKVVPQKCP--LCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      .|.+.|.++++|.|.  .|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467889999999998  899999999999999999999999999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.06  E-value=8.6e-12  Score=79.42  Aligned_cols=52  Identities=12%  Similarity=0.268  Sum_probs=46.7

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHH
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAY   58 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   58 (319)
                      .|++.|.+++||.|+.|++.|.....|.   +.|++++||.|+.|++.|.....+
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            5889999999999999999999988887   889999999999999999876544

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.2e-11  Score=71.15  Aligned_cols=21  Identities=33%  Similarity=0.643  Sum_probs=7.6

Q ss_pred             cccccccccCChHHHHHHHHH
Q psy7463         154 ACDRCDKRFSLLQNLKRHLAI  174 (319)
Q Consensus       154 ~C~~C~~~f~~~~~L~~H~~~  174 (319)
                      .|++|++.|.....|..|+++
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eq4_A           14 NCKECGKSFSRAPCLLKHERL   34 (46)
T ss_dssp             CBTTTTBCCSCHHHHHHHHHH
T ss_pred             ECCCCCCccCchHHHHHHHHh
Confidence            333333333333333333333

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.2e-11  Score=69.51  Aligned_cols=44  Identities=9%  Similarity=0.165  Sum_probs=40.7

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .+++.|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 s~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            35778999999999999999999999999999999999999973

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=1.2e-10  Score=71.82  Aligned_cols=43  Identities=30%  Similarity=0.515  Sum_probs=20.3

Q ss_pred             CCCCccccccccccccCChHHHHHHHH-Hhc-CCCCccCchhhccC
Q psy7463         147 RGDKVFYACDRCDKRFSLLQNLKRHLA-IHE-RIAYQCNVCDKKYS  190 (319)
Q Consensus       147 ~~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~-~~~~~C~~C~~~f~  190 (319)
                      .++++ |.|++|++.|.....|..|++ +|. +++|.|++|++.|.
T Consensus         8 ~~~k~-~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            8 SVGKP-YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CSSCC-EECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCC-eECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            33444 445555555554444555543 444 44444444444443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.3e-10  Score=68.30  Aligned_cols=43  Identities=9%  Similarity=0.060  Sum_probs=40.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            5889999999999999999999999999999999999999873

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4e-11  Score=71.24  Aligned_cols=24  Identities=33%  Similarity=0.753  Sum_probs=8.9

Q ss_pred             CCccCchhhccCCHHHHHHHHHhc
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      +|.|++|++.|.+.+.|..|+++|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2ytn_A           12 PYKCNECGKVFTQNSHLARHRGIH   35 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHGGGT
T ss_pred             CeECCCCCCeeCCHHHHHHHhhhc
Confidence            333333333333333333333333

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.3e-11  Score=71.10  Aligned_cols=21  Identities=33%  Similarity=0.691  Sum_probs=7.7

Q ss_pred             cccccccccCChHHHHHHHHH
Q psy7463         154 ACDRCDKRFSLLQNLKRHLAI  174 (319)
Q Consensus       154 ~C~~C~~~f~~~~~L~~H~~~  174 (319)
                      .|++|++.|.....|..|+++
T Consensus        14 ~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2eoe_A           14 KCNECGKVFTQNSHLANHQRI   34 (46)
T ss_dssp             EETTTTEECSSHHHHHHHHGG
T ss_pred             ECCCcChhhCCHHHHHHHHHH
Confidence            333333333333333333333

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.2e-11  Score=70.74  Aligned_cols=24  Identities=42%  Similarity=0.754  Sum_probs=8.9

Q ss_pred             CCccCchhhccCCHHHHHHHHHhc
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      +|.|++|++.|.+.+.|..|+++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytq_A           12 PYGCSECGKAFSSKSYLIIHMRTH   35 (46)
T ss_dssp             SCBCSSSCCBCSCHHHHHHHHTTT
T ss_pred             CcCCCccChhhCChHHHHHHHHHh
Confidence            333333333333333333333333

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.7e-11  Score=70.94  Aligned_cols=20  Identities=25%  Similarity=0.547  Sum_probs=7.1

Q ss_pred             CccCchhhccCCHHHHHHHH
Q psy7463         180 YQCNVCDKKYSRLSDYKIHM  199 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~  199 (319)
                      |.|++|++.|.+...|..|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2epz_A           13 FDCIDCGKAFSDHIGLNQHR   32 (46)
T ss_dssp             BCCTTTCCCBSSHHHHHHHH
T ss_pred             eECCCCCceeCCHHHHHHHH
Confidence            33333333333333333333

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.03  E-value=4.2e-11  Score=71.18  Aligned_cols=23  Identities=35%  Similarity=0.865  Sum_probs=8.3

Q ss_pred             CccCchhhccCCHHHHHHHHHhc
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      |.|++|++.|...+.|..|+++|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2em0_A           13 WKCRECDMCFSQASSLRLHQNVH   35 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHGGGG
T ss_pred             eECCCCCcccCCHHHHHHHHHHc
Confidence            33333333333333333333333

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5e-11  Score=70.82  Aligned_cols=25  Identities=36%  Similarity=0.788  Sum_probs=9.7

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcC
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~  203 (319)
                      +|.|++|++.|.+.+.|..|+++|.
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytr_A           12 PYKCNECGKAFSQTSKLARHQRIHT   36 (46)
T ss_dssp             TTCCTTTCCCCSSHHHHHHHHTTTT
T ss_pred             CcCCCCCCCccCCHHHHHHHHHhcC
Confidence            3333333333333333333333333

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.3e-11  Score=70.71  Aligned_cols=23  Identities=30%  Similarity=0.628  Sum_probs=8.3

Q ss_pred             CccCchhhccCCHHHHHHHHHhc
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      |.|++|++.|.+...|..|+++|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eop_A           13 HECRECGKSFSFNSQLIVHQRIH   35 (46)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHTTT
T ss_pred             eeCCCCCchhCCHHHHHHHHHHc
Confidence            33333333333333333333333

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.6e-10  Score=66.71  Aligned_cols=40  Identities=10%  Similarity=0.101  Sum_probs=37.3

Q ss_pred             ccCCCCccccccccchhccccHHHHHHHHHHhcCCCcccc
Q psy7463           6 SDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYEC   45 (319)
Q Consensus         6 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   45 (319)
                      ++.|.+++||.|++|++.|.....|..|+++|++++||.|
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CSSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4578889999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.99  E-value=1.9e-10  Score=68.25  Aligned_cols=41  Identities=27%  Similarity=0.454  Sum_probs=22.5

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            5 SSGTGEKP-YECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCS-CBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CccCCCCc-eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34555555 555555555555555555555555 555555544

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.6e-10  Score=67.87  Aligned_cols=41  Identities=24%  Similarity=0.352  Sum_probs=25.1

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. +++|.|++|
T Consensus         3 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKP-FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCSSCCC-EECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCCCcC-ccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34556665 666666666666666666666665 556666655

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.98  E-value=1.7e-10  Score=68.48  Aligned_cols=41  Identities=24%  Similarity=0.367  Sum_probs=24.9

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            5 SSGTGEKP-FKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCS-BCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCC-cccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555 666666666666666666666665 556666555

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=68.40  Aligned_cols=41  Identities=22%  Similarity=0.349  Sum_probs=24.3

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            5 SSGTGERP-HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCS-EECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCCCC-eeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555 566666666666666666666655 556666554

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.1e-10  Score=67.99  Aligned_cols=40  Identities=25%  Similarity=0.429  Sum_probs=20.7

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .|.++++ |.|++|++.|.....|..|+++|. +++|.|++|
T Consensus         6 ~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            6 SGTGEKP-YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSSCCS-CBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCC-ccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4445544 555555555555555555555554 445555544

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.1e-10  Score=68.04  Aligned_cols=40  Identities=28%  Similarity=0.463  Sum_probs=19.9

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .|.++++ |.|++|++.|.....|..|+++|+ ++||.|++|
T Consensus         6 ~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            6 SGTGEKP-FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCS-CCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCC-cCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444 455555555555555555555544 445555444

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.1e-10  Score=69.39  Aligned_cols=43  Identities=26%  Similarity=0.331  Sum_probs=21.4

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccccch
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEME  241 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~~c  241 (319)
                      |+++|.+. +|.|++|++.|.+.+.|..|++ .|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHT-TTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHh-hcCCCCCCCCCCC
Confidence            34444443 4555555555555555555544 4555555555443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=68.26  Aligned_cols=41  Identities=24%  Similarity=0.361  Sum_probs=23.5

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            5 SSGTGENP-YECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCC-EECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCcC-cCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            34555555 566666666666666666655555 555555554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=68.21  Aligned_cols=41  Identities=27%  Similarity=0.458  Sum_probs=24.7

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            5 SSGSGEKP-YKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCS-EECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             ccCCCCCC-EeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            44555555 666666666666666666666665 556666554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.5e-10  Score=67.72  Aligned_cols=41  Identities=29%  Similarity=0.514  Sum_probs=22.1

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            5 SSGTGEKP-YICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CTTSSCCS-EECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cCCCCCcC-eECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34555555 555555555555555555555555 455555544

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=68.23  Aligned_cols=41  Identities=29%  Similarity=0.471  Sum_probs=25.8

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            5 SSGTGVKP-YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCS-EECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccCCCcC-eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45666666 666666666666666666666665 556666655

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=68.29  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=26.6

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. +++|.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            5 SSGSGERP-YGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCSCCCC-EECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCC-EEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45666666 666666666666666666666665 566666655

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=68.27  Aligned_cols=41  Identities=27%  Similarity=0.429  Sum_probs=25.6

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            5 SSGTGERP-YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSCCCS-EECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCC-cCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44666666 666666666666666666666665 556666655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=68.36  Aligned_cols=41  Identities=32%  Similarity=0.462  Sum_probs=21.6

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            5 SSGTGEKP-YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCS-EECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCcCCCCC-eeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            34555555 555555555555555555555554 445555544

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=67.96  Aligned_cols=41  Identities=22%  Similarity=0.351  Sum_probs=23.2

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            5 SSGTGEKP-YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCSSCCS-SSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             cCCCCCCC-cCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34555555 555555555555555555555555 555555554

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=67.86  Aligned_cols=41  Identities=27%  Similarity=0.418  Sum_probs=24.0

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            5 SSGSGEKP-YKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCSCCCCS-EECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             cccCCCcC-eECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            34555555 566666666666666666666655 555666554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.96  E-value=1e-10  Score=69.39  Aligned_cols=43  Identities=26%  Similarity=0.233  Sum_probs=22.2

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccccch
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEME  241 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~~c  241 (319)
                      |+++|.+. +|.|++|++.|.+.+.|..|++ .|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR-SHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGG-GSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            34444443 4555555555555555555554 4555555555543

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.3e-10  Score=69.05  Aligned_cols=43  Identities=21%  Similarity=0.168  Sum_probs=21.7

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccccch
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEME  241 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~~c  241 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHT-TTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            34444443 4555555555555555555544 4555555555443

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=4.7e-10  Score=66.13  Aligned_cols=41  Identities=22%  Similarity=0.473  Sum_probs=25.6

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchh
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD  186 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~  186 (319)
                      .|.++++ |.|++|++.|.....|..|+++|+ +++|.|++||
T Consensus         4 ~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKP-YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCS-SEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCC-CcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4555665 666666666666666666666665 5566666664

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=67.84  Aligned_cols=41  Identities=27%  Similarity=0.408  Sum_probs=26.0

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            5 SSGSGEKP-YGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCC-EEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CccCCCcC-eECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            44666666 666666666666666666666665 566666655

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=67.76  Aligned_cols=41  Identities=27%  Similarity=0.420  Sum_probs=21.8

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            5 SSGTGEKP-YECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCS-EECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCcC-cCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34555555 555555555555555555555554 455555544

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.6e-10  Score=68.60  Aligned_cols=40  Identities=25%  Similarity=0.412  Sum_probs=19.5

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         6 ~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            6 SGTGGKH-FECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSCC-EECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccCCCCC-eECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444444 455555555555555555554444 444554443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.4e-10  Score=69.21  Aligned_cols=21  Identities=24%  Similarity=0.561  Sum_probs=7.6

Q ss_pred             CccCchhhccCCHHHHHHHHH
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMN  200 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~  200 (319)
                      |.|++|++.|...+.|..|++
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~   33 (47)
T 2epx_A           13 YECIECGKAFIQNTSLIRHWR   33 (47)
T ss_dssp             BCCSSSCCCBSSHHHHHHHHT
T ss_pred             EECCccCchhCChHHHHHHhH
Confidence            333333333333333333333

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2e-10  Score=68.16  Aligned_cols=40  Identities=23%  Similarity=0.357  Sum_probs=19.9

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         6 ~h~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            6 SGSVEKP-YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCCSS-CBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCC-eeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444 455555555555555555555544 444555444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.95  E-value=2e-10  Score=68.16  Aligned_cols=41  Identities=29%  Similarity=0.457  Sum_probs=22.6

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            5 SSGTGEKR-YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCTTSCC-EECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             cCCCCCcC-cCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34555555 555555555555555555555555 555555544

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.7e-10  Score=67.53  Aligned_cols=41  Identities=20%  Similarity=0.301  Sum_probs=22.5

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            5 SSGSGEKP-FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCS-EECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCC-cCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34555555 555555555555555555555555 455555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.3e-10  Score=67.84  Aligned_cols=40  Identities=35%  Similarity=0.558  Sum_probs=19.8

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .|.++++ |.|++|++.|.....|..|+++|. +++|.|++|
T Consensus         6 ~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            6 SGSGEKP-YVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCS-EECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCC-eECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444 455555555555555555555444 444555444

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.9e-10  Score=68.24  Aligned_cols=40  Identities=30%  Similarity=0.473  Sum_probs=19.9

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         6 ~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKP-YKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCC-EECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCC-eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444 455555555555555555555544 445555444

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.6e-10  Score=67.66  Aligned_cols=41  Identities=22%  Similarity=0.276  Sum_probs=23.8

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. +++|.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            5 SSGTGEKP-CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCS-EECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             ccCCCCCC-eeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34555555 566666666666666666666555 555665554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3.1e-10  Score=67.27  Aligned_cols=41  Identities=17%  Similarity=0.217  Sum_probs=24.4

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            5 SSGSREKS-HQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSSCCCC-EECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccCCCCC-EEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555 566666666666666666666655 556666554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2e-10  Score=68.10  Aligned_cols=40  Identities=25%  Similarity=0.458  Sum_probs=20.4

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         6 ~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTGEKP-YKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCS-EECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCcC-ccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444444 555555555555555555555554 445555444

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.9e-10  Score=68.26  Aligned_cols=41  Identities=27%  Similarity=0.459  Sum_probs=27.7

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            5 SSGTGEKP-YKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS-EECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCCCCCCC-eECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45666666 677777777777777777776666 666777665

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.1e-10  Score=68.05  Aligned_cols=40  Identities=25%  Similarity=0.470  Sum_probs=20.8

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      +|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         6 ~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKP-YKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCS-EEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCC-eECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            4455554 555555555555555555555554 445555544

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.6e-10  Score=67.61  Aligned_cols=41  Identities=24%  Similarity=0.476  Sum_probs=21.4

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            5 SSGSGEKP-FKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCCCS-EEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cCCCCCCC-eeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34555555 555555555555555555555554 445555544

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.5e-10  Score=67.70  Aligned_cols=40  Identities=25%  Similarity=0.466  Sum_probs=19.6

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .|.++++ |.|++|++.|.....|..|+++|+ ++||.|+.|
T Consensus         6 ~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKS-HTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSS-EECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cCCCCCC-eECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444444 455555555555555555555444 444555444

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.92  E-value=2.5e-10  Score=67.71  Aligned_cols=40  Identities=25%  Similarity=0.461  Sum_probs=20.0

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .|.++++ |.|++|++.|.....|..|+++|. +++|.|++|
T Consensus         6 ~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            6 SGTGEKP-YNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCS-EECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCcC-eECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3444444 455555555555555555555544 445555444

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3e-10  Score=67.34  Aligned_cols=41  Identities=22%  Similarity=0.341  Sum_probs=26.5

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. +++|.|++|
T Consensus         5 ~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKP-YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCS-EECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCC-eECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44666666 666666666666666666666665 566666655

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=4.4e-10  Score=67.30  Aligned_cols=34  Identities=29%  Similarity=0.511  Sum_probs=15.8

Q ss_pred             ccccccccccCChHHHHHHHHHhc-CCCCccCchh
Q psy7463         153 YACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCD  186 (319)
Q Consensus       153 ~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~  186 (319)
                      |.|++|++.|.....|..|+++|. ++||.|++|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A           13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             eeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            444444444444444444444444 4444444444

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.91  E-value=3.5e-10  Score=67.04  Aligned_cols=40  Identities=25%  Similarity=0.359  Sum_probs=20.3

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      +|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         6 ~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAGVNP-YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCCCCS-EECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCC-eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444 555555555555555555555554 445555444

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.90  E-value=1.6e-10  Score=71.19  Aligned_cols=49  Identities=14%  Similarity=0.200  Sum_probs=29.5

Q ss_pred             hccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHHhhccccccc
Q psy7463         187 KKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQ  236 (319)
Q Consensus       187 ~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~  236 (319)
                      +.|.....|..|+++|.+. +|.|++|++.|...+.|..|++ .|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE-LRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH-HHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH-HhccCCCC
Confidence            4455555666666666654 5666666666666666666665 55555544

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.9e-10  Score=68.24  Aligned_cols=41  Identities=20%  Similarity=0.401  Sum_probs=21.8

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            5 SSGTGEKP-FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCS-EECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCC-eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34555555 555555555555555555555554 455555544

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.8e-10  Score=66.91  Aligned_cols=39  Identities=31%  Similarity=0.474  Sum_probs=19.0

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCc
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNV  184 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~  184 (319)
                      +|.++++ |.|++|++.|.....|..|+++|. ++||.|++
T Consensus         6 ~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            6 SGTGEKP-YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCS-EECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCC-eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444444 455555555555555555554444 44444443

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.1e-10  Score=66.00  Aligned_cols=41  Identities=27%  Similarity=0.433  Sum_probs=25.1

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            5 SSGSGEKP-FKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCS-EECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCC-EECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44566665 666666666666666666666665 556666543

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.1e-10  Score=65.70  Aligned_cols=41  Identities=27%  Similarity=0.404  Sum_probs=27.7

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         5 ~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKP-YQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCT-TCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCC-eeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44666666 677777777777777777776666 666777665

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.1e-10  Score=64.23  Aligned_cols=39  Identities=31%  Similarity=0.396  Sum_probs=21.4

Q ss_pred             HHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         199 MNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       199 ~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      +++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQK-MHTVKSGPSS   41 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHH-HTSCCSSCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHH-HhCCCCCCCC
Confidence            3445443 4555555555555555555555 4555555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.86  E-value=5.2e-10  Score=64.86  Aligned_cols=39  Identities=28%  Similarity=0.381  Sum_probs=22.4

Q ss_pred             HHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         199 MNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       199 ~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      +++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   41 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQR-THAGESGPSS   41 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHG-GGCCCCSCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHH-hcCCCCCCCC
Confidence            3445544 4666666666666666666655 5555555555

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.86  E-value=3.4e-10  Score=69.72  Aligned_cols=46  Identities=11%  Similarity=0.188  Sum_probs=28.7

Q ss_pred             cccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC
Q psy7463         160 KRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF  205 (319)
Q Consensus       160 ~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  205 (319)
                      +.|.....|..|+++|. +++|.|++||+.|...+.|..|+++|+++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   50 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTT
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            44555556666666665 55666666666666666666666666654

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=6e-10  Score=73.55  Aligned_cols=62  Identities=13%  Similarity=0.228  Sum_probs=55.4

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      .|++.+.+.+|+.|+.|++.|. ...|..|+ .+.+++||.|+.|++.|. ...|..|++++.+.
T Consensus         7 ~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            7 GHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            4778889999999999999995 89999999 899999999999999887 58999999888654

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.2e-09  Score=64.70  Aligned_cols=40  Identities=30%  Similarity=0.463  Sum_probs=21.8

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      .|.++++ |.|++|++.|.....|..|+++|. ++||.|++|
T Consensus         6 ~h~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKP-YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCS-EECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCC-eeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3455555 555555555555555555555555 455555554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7.6e-10  Score=65.57  Aligned_cols=41  Identities=24%  Similarity=0.269  Sum_probs=22.7

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRG-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHT-TTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHH-hhCCCCCCCCC
Confidence            44455544 4555556666655556666554 55555555554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1e-09  Score=64.95  Aligned_cols=41  Identities=22%  Similarity=0.250  Sum_probs=23.9

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKR-VHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHH-HCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            44455554 4666666666666666666655 55566666554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=8.2e-10  Score=65.41  Aligned_cols=41  Identities=22%  Similarity=0.180  Sum_probs=22.5

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQK-IHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHT-TTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            44445544 4555555555555555555555 55555555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=7.2e-10  Score=65.67  Aligned_cols=41  Identities=27%  Similarity=0.284  Sum_probs=24.9

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|+|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHT-TTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            44555554 5666666666666666666655 56666666664

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=2.3e-10  Score=78.00  Aligned_cols=62  Identities=10%  Similarity=0.178  Sum_probs=52.7

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhccCCc
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGGI   69 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   69 (319)
                      .+++.|.+++||.|++|++.|.....|..|+++|++++||.|..|.    ....|..|++.|.+.+
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~~   76 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGAF   76 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCSS
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccccc
Confidence            3567789999999999999999999999999999999999998765    3456677777777754

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9e-10  Score=65.23  Aligned_cols=41  Identities=24%  Similarity=0.241  Sum_probs=22.3

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQR-IHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHG-GGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            44445444 4555555555555555555555 45555555554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.7e-10  Score=65.08  Aligned_cols=41  Identities=22%  Similarity=0.210  Sum_probs=25.3

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQR-THTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHH-TSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            44555554 5666666666666666666665 56666666664

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=64.91  Aligned_cols=41  Identities=20%  Similarity=0.226  Sum_probs=22.9

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHH-HHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            34455544 4666666666666666666655 55555555554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=8.4e-10  Score=65.37  Aligned_cols=41  Identities=24%  Similarity=0.280  Sum_probs=22.6

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHT-TTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhH-hcCCCCCCCCC
Confidence            34445544 4555555555555555555554 55555555554

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=64.27  Aligned_cols=40  Identities=28%  Similarity=0.349  Sum_probs=24.2

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQR-THTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHH-HTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHH-HhCCCCCCCC
Confidence            44555554 5666666666666666666665 5666666655

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.9e-10  Score=65.05  Aligned_cols=41  Identities=24%  Similarity=0.246  Sum_probs=24.2

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR-VHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHT-TTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            44555554 4666666666666666666655 56666666654

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=8.4e-10  Score=65.36  Aligned_cols=41  Identities=22%  Similarity=0.230  Sum_probs=24.4

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQR-IHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHG-GGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHh-HhCCCCCCCCC
Confidence            44555554 4666666666666666666655 56666666654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.82  E-value=1.5e-09  Score=64.25  Aligned_cols=39  Identities=28%  Similarity=0.512  Sum_probs=24.4

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccC
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|+
T Consensus         5 ~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            5 SSGTGEKP-FECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCS-EECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCC-EECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44566665 666666666666666666666665 5566665

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=8.1e-10  Score=65.43  Aligned_cols=41  Identities=29%  Similarity=0.297  Sum_probs=21.9

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQR-VHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGG-GGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            34445444 4555555555555555555554 45555555554

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=9.5e-10  Score=65.13  Aligned_cols=41  Identities=22%  Similarity=0.288  Sum_probs=22.3

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQV-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHT-TTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            44445443 4555555555555555555555 55555555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.81  E-value=4.5e-11  Score=76.00  Aligned_cols=51  Identities=6%  Similarity=0.036  Sum_probs=30.4

Q ss_pred             HHHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccccchhhhhhhhhhH
Q psy7463         197 IHMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGEMEDKVGEKKIGE  251 (319)
Q Consensus       197 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~~c~~~~~~~~~~  251 (319)
                      .|+++|.+. +|.|+.|++.|.....|.    ..|.++++|.|..|++.|.....+
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCccccCccc
Confidence            455556554 566666666666665554    256666666666666666554433

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.7e-09  Score=64.05  Aligned_cols=39  Identities=23%  Similarity=0.345  Sum_probs=23.9

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccC
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|+
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            5 SSGTGQRP-YECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSS-EECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             cccCCCcC-cCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            44556655 666666666666666666666665 5566664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=9.8e-10  Score=65.07  Aligned_cols=41  Identities=22%  Similarity=0.228  Sum_probs=23.0

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQR-VHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGG-GGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHH-hcCCCCCCCCC
Confidence            44455544 4666666666666666666655 55555555554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.1e-09  Score=64.89  Aligned_cols=41  Identities=27%  Similarity=0.233  Sum_probs=26.0

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ-SHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHH-HHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHH-HcCCCCCCCCC
Confidence            45556554 5666666666666666666666 56666666664

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.1e-09  Score=64.13  Aligned_cols=40  Identities=23%  Similarity=0.439  Sum_probs=25.2

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      |+++|.++ +|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHER-THARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHH-HCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhH-hcCCCCCCCC
Confidence            45555554 5666666666666666666666 5666666665

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=8.6e-10  Score=64.62  Aligned_cols=40  Identities=30%  Similarity=0.378  Sum_probs=20.9

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQK-THSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHT-TSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHH-HcCCCCCCCC
Confidence            34445443 4555555555555555555554 4555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.1e-09  Score=64.19  Aligned_cols=40  Identities=30%  Similarity=0.414  Sum_probs=20.2

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-THTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHT-TTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhh-hcCCCCCCCC
Confidence            34444443 4555555555555555555554 4555555544

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=63.86  Aligned_cols=39  Identities=26%  Similarity=0.456  Sum_probs=23.8

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccC
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|+
T Consensus         5 ~~H~~~~~-~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            5 SSGTGEKP-YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCS-EECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCcC-eECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555555 666666666666666666666665 5566664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.80  E-value=2.7e-09  Score=60.67  Aligned_cols=38  Identities=16%  Similarity=0.258  Sum_probs=33.8

Q ss_pred             CCCccccccccchhccccHHHHHHHHHHhcCCCccccc
Q psy7463           9 KDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECD   46 (319)
Q Consensus         9 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   46 (319)
                      |.+++||.|++|++.|.....|..|+++|++++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            46788999999999999999999999999999999763

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=9e-10  Score=65.22  Aligned_cols=41  Identities=27%  Similarity=0.272  Sum_probs=25.5

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRR-IHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGG-GTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHH-hcCCCCCcCCC
Confidence            44555554 5666666666666666666665 56666666664

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.9e-09  Score=63.74  Aligned_cols=39  Identities=28%  Similarity=0.466  Sum_probs=24.3

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccC
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|+
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            5 SSGTGEKP-YKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCC-EECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCCCCCCC-eeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            44566665 666666666666666666666665 5566665

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1e-09  Score=64.99  Aligned_cols=41  Identities=24%  Similarity=0.275  Sum_probs=25.8

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.....|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHT-TTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            45555554 5666666666666666666665 56666666664

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=63.89  Aligned_cols=39  Identities=28%  Similarity=0.485  Sum_probs=25.8

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccC
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|. ++||.|+
T Consensus         5 ~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            5 SSGTGEKP-YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSCCCS-EECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             cCcCCCcC-ccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            45666666 666666666666666666666666 5666665

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=3.8e-09  Score=59.18  Aligned_cols=37  Identities=22%  Similarity=0.418  Sum_probs=32.5

Q ss_pred             ccCCCCccccccccchhccccHHHHHHHHHHhcCCCc
Q psy7463           6 SDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQL   42 (319)
Q Consensus         6 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   42 (319)
                      +++|.+++||.|++|++.|.....|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            4578889999999999999999999999999988765

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1e-09  Score=64.98  Aligned_cols=40  Identities=20%  Similarity=0.256  Sum_probs=21.8

Q ss_pred             HHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         199 MNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       199 ~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      +++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHS-VHSGERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTT-TTTSCCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHH-hcCCCCCCCCC
Confidence            4445443 4555555555555555555554 45555555554

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.79  E-value=1.5e-09  Score=62.87  Aligned_cols=40  Identities=20%  Similarity=0.251  Sum_probs=25.4

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR-SCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHH-HTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhh-hcCCCCCCCC
Confidence            34555554 5667777777777777777766 6666666655

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1.2e-09  Score=63.32  Aligned_cols=40  Identities=28%  Similarity=0.386  Sum_probs=23.1

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      |+++|.+. +|.|++|++.|.+.+.|..|++ .|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-IHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTT-TTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHH-hcCCCCCCCC
Confidence            34455554 4666666666666666666655 5555555554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.6e-09  Score=63.17  Aligned_cols=39  Identities=31%  Similarity=0.590  Sum_probs=24.7

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccC
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      ..|.++++ |.|++|++.|.....|..|+++|+ +++|.|+
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            5 SSGTGEKP-YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CCCSSCCS-EEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccCCCCCC-eECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45666666 666666666666666666666665 5566664

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.4e-09  Score=64.41  Aligned_cols=41  Identities=24%  Similarity=0.290  Sum_probs=22.5

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.....|..|++ .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQA-IHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHT-TSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            44445544 4555555555555555555555 55555555554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=9.1e-10  Score=63.77  Aligned_cols=40  Identities=33%  Similarity=0.412  Sum_probs=22.1

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-VHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGG-GTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHH-HhCCCCCCCC
Confidence            34455544 4566666666666666666655 5555555544

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1.4e-09  Score=63.70  Aligned_cols=40  Identities=18%  Similarity=0.272  Sum_probs=22.4

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      |+++|.+. +|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQK-THAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGG-GGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHH-HcCCCCCcCC
Confidence            44455544 4566666666666666666655 5555555555

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3e-09  Score=62.92  Aligned_cols=39  Identities=23%  Similarity=0.504  Sum_probs=26.2

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccC
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. +++|.|+
T Consensus         5 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            5 SSGSGERP-FKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SCSSCCCS-CCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCCCCCCC-eECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45666666 677777777777777777776666 6666665

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.1e-09  Score=63.35  Aligned_cols=40  Identities=23%  Similarity=0.390  Sum_probs=27.0

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      |+++|.++ +|.|++|++.|.+...|..|++ .|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL-IHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTH-HHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHH-HcCCCCCCCC
Confidence            44556655 5777777777777777777766 6666666665

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.7e-09  Score=64.04  Aligned_cols=40  Identities=23%  Similarity=0.326  Sum_probs=22.8

Q ss_pred             HHhcCCC-cccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         199 MNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       199 ~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      +++|.+. +|.|++|++.|.+...|..|++ .|.++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQR-VHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGG-GSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            3445544 4666666666666666666655 55555555554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=7e-09  Score=65.34  Aligned_cols=40  Identities=10%  Similarity=0.049  Sum_probs=35.4

Q ss_pred             CCCCcccccccc--chhccccHHHHHHHH-HHhcCCCcccccc
Q psy7463           8 LKDKVVPQKCPL--CERLYKSVYRMKEHM-KKQHKGQLYECDC   47 (319)
Q Consensus         8 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~   47 (319)
                      ..++++||.|++  |++.|...+.|..|+ ++|++++||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            457899999975  999999999999998 6899999999853

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.75  E-value=6.8e-09  Score=60.38  Aligned_cols=38  Identities=29%  Similarity=0.481  Sum_probs=22.3

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccC
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      .|.++++ |.|+.|++.|.....|..|+++|+ ++||.|+
T Consensus         4 ~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGA-FFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCC-BCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCC-EECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            3555555 566666666666666666666655 5556554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.7e-09  Score=64.06  Aligned_cols=41  Identities=22%  Similarity=0.337  Sum_probs=23.7

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccc-ccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTK-FEGQIGE  239 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~-~~~~~c~  239 (319)
                      |+++|.+. +|.|++|++.|.+...|..|++ .|.+ +++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            44455554 4666666666666666666655 5555 5666554

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.73  E-value=7.4e-09  Score=57.95  Aligned_cols=36  Identities=19%  Similarity=0.389  Sum_probs=27.7

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhcCC
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      |++.|.+++||.|+.|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            667777788888888888888888888887777653

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=8.6e-09  Score=60.89  Aligned_cols=38  Identities=24%  Similarity=0.375  Sum_probs=23.3

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccC
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      .|.++++ |.|++|++.|.....|..|+++|. ++||.|+
T Consensus         6 ~h~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERG-HRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSS-CCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCC-cCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4555555 666666666666666666666665 5566664

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=4.8e-10  Score=74.04  Aligned_cols=63  Identities=19%  Similarity=0.249  Sum_probs=35.9

Q ss_pred             HHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCCC
Q psy7463         138 MLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNGF  205 (319)
Q Consensus       138 l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  205 (319)
                      |..|+ ..|.++++ +.|+.|++.| ....|..|+ .|. ++|+.|+.|++.|. ...|..|+++|.+.
T Consensus         5 L~~H~-~~~c~~r~-~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            5 SSGHE-ETECPLRL-AVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CSCCC-CCCCCCCC-EECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHhhC-cccCCCcc-cCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            34444 44555565 6666666666 356666666 444 55666666666555 35566666665543

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=5.3e-09  Score=61.15  Aligned_cols=37  Identities=22%  Similarity=0.332  Sum_probs=19.7

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCcc
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQC  182 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C  182 (319)
                      .|.++++ |.|++|++.|.....|..|+++|. ++||.|
T Consensus         6 ~h~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            6 SGAAKTT-SECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSSSCC-CCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCcC-eECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            3445554 555555555555555555555554 445554

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.2e-09  Score=62.12  Aligned_cols=40  Identities=25%  Similarity=0.311  Sum_probs=24.9

Q ss_pred             HHHhcCCC-cccccccccccCChHHHHHHHHhhccccccccc
Q psy7463         198 HMNMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIG  238 (319)
Q Consensus       198 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c  238 (319)
                      |+++|.+. +|.|++|++.|.....|..|++ .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHER-THAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHG-GGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHh-HhcCCCCCCC
Confidence            45555554 5666666666666666666665 5666666554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4e-09  Score=62.35  Aligned_cols=39  Identities=28%  Similarity=0.442  Sum_probs=28.8

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccC
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. +++|.|+
T Consensus         5 ~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            5 SSGTGEKP-FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCSCCCCS-EECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccCCCCC-eeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45777777 777777777777777777777776 6777775

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.68  E-value=1.2e-08  Score=55.49  Aligned_cols=32  Identities=13%  Similarity=0.241  Sum_probs=29.8

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCCCccc
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKGQLYE   44 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   44 (319)
                      +||.|++|++.|.....|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            48999999999999999999999999999885

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.67  E-value=1.6e-08  Score=55.72  Aligned_cols=34  Identities=21%  Similarity=0.456  Sum_probs=28.2

Q ss_pred             CCCccccccccchhccccHHHHHHHHHHhcCCCc
Q psy7463           9 KDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQL   42 (319)
Q Consensus         9 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   42 (319)
                      |.++++|.|++|++.|.....|..|++.|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5678888888888888888888888888887764

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=8.9e-09  Score=60.50  Aligned_cols=38  Identities=29%  Similarity=0.505  Sum_probs=21.4

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccC
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCN  183 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~  183 (319)
                      .|.++++ |.|++|++.|.....|..|+++|. +++|.|+
T Consensus         6 ~h~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKP-FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCS-EEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcC-ccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            3555555 555555555555555555555555 5555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.1e-08  Score=61.02  Aligned_cols=40  Identities=30%  Similarity=0.428  Sum_probs=21.0

Q ss_pred             hcCCCCcccccc--ccccccCChHHHHHHHHHhc-CCCCccCch
Q psy7463         145 KHRGDKVFYACD--RCDKRFSLLQNLKRHLAIHE-RIAYQCNVC  185 (319)
Q Consensus       145 ~H~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C  185 (319)
                      +|.++++ |.|.  .|++.|.....|..|+++|. ++||.|++|
T Consensus         6 ~H~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKP-FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCC-EECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCC-eECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445555 5554  45555555555555555554 455555544

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=4.9e-09  Score=61.31  Aligned_cols=38  Identities=29%  Similarity=0.562  Sum_probs=24.5

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCcc
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQC  182 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C  182 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|+ ++||.|
T Consensus         5 ~~H~~~~~-~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            5 SSGTDSKS-YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCC-EEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             cCCCCCCC-eECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            45666666 666666666666666666666666 556665

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.65  E-value=1.5e-08  Score=55.84  Aligned_cols=34  Identities=15%  Similarity=0.285  Sum_probs=27.3

Q ss_pred             CCCccccccccchhccccHHHHHHHHHHhcCCCc
Q psy7463           9 KDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQL   42 (319)
Q Consensus         9 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   42 (319)
                      |.+++||.|++|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5677888888888888888888888888877654

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.1e-08  Score=58.65  Aligned_cols=37  Identities=30%  Similarity=0.511  Sum_probs=19.8

Q ss_pred             hcCCCCccccccccccccCChHHHHHHHHHhc-CCCCcc
Q psy7463         145 KHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQC  182 (319)
Q Consensus       145 ~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C  182 (319)
                      +|.++++ |.|++|++.|.....|..|+++|. ++||.|
T Consensus         4 ~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRV-YECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCC-EECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCC-eECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3455555 555555555555555555555554 445544

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=2.5e-08  Score=55.90  Aligned_cols=33  Identities=21%  Similarity=0.426  Sum_probs=26.1

Q ss_pred             CCCCcccccccc--chhccccHHHHHHHHHHhcCC
Q psy7463           8 LKDKVVPQKCPL--CERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus         8 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      ++.+++||.|++  |++.|...+.|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            456778888875  888888888888888888765

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.60  E-value=8.6e-09  Score=57.67  Aligned_cols=35  Identities=14%  Similarity=0.193  Sum_probs=32.7

Q ss_pred             HHHHhcCCCccccccchhhccCHHHHHHHHHhccC
Q psy7463          33 HMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG   67 (319)
Q Consensus        33 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   67 (319)
                      |+++|++++||.|+.|++.|.....|..|++.|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            67789999999999999999999999999999876

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.54  E-value=3.8e-08  Score=54.33  Aligned_cols=32  Identities=22%  Similarity=0.331  Sum_probs=26.3

Q ss_pred             CCCccccccccchhccccHHHHHHHHHHhcCCCcccccc
Q psy7463           9 KDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus         9 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      ..+++||.|+.|++.|...+.|.+|+       ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            46788889988999999888888887       677754

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=5e-08  Score=54.52  Aligned_cols=34  Identities=15%  Similarity=0.138  Sum_probs=24.9

Q ss_pred             cCCCCccccccccchhccccHHHHHHH-HHHhcCC
Q psy7463           7 DLKDKVVPQKCPLCERLYKSVYRMKEH-MKKQHKG   40 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~   40 (319)
                      +.|.+++||.|+.|++.|.....|..| ++.|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            456777777777777777777777777 7777653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=6.1e-08  Score=53.69  Aligned_cols=34  Identities=29%  Similarity=0.480  Sum_probs=26.7

Q ss_pred             cCCCCccccccccchhccccHHHHHHHHHHhcCC
Q psy7463           7 DLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      ..|.+++||.|++|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3567778888888888888888888888888765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=6.9e-08  Score=53.45  Aligned_cols=34  Identities=21%  Similarity=0.363  Sum_probs=27.7

Q ss_pred             CCCCccccccccchhccccHHHHHHHHHHhcCCC
Q psy7463           8 LKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      .|.+++||.|++|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5677888888888888888888888888887653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=4.9e-08  Score=54.47  Aligned_cols=35  Identities=14%  Similarity=0.312  Sum_probs=28.8

Q ss_pred             cCCCCccccccccchhccccH-HHHHHHHHHhcCCC
Q psy7463           7 DLKDKVVPQKCPLCERLYKSV-YRMKEHMKKQHKGQ   41 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~   41 (319)
                      ++|.+++||.|+.|++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            467788888888888888888 88888888887753

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.52  E-value=6e-08  Score=54.48  Aligned_cols=35  Identities=14%  Similarity=0.254  Sum_probs=31.1

Q ss_pred             CCCccccccc--cchhccccHHHHHHHHHHhcCCCcc
Q psy7463           9 KDKVVPQKCP--LCERLYKSVYRMKEHMKKQHKGQLY   43 (319)
Q Consensus         9 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~   43 (319)
                      |.+++||.|+  .|++.|.....|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4678899999  5999999999999999999998887

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=4.9e-08  Score=54.13  Aligned_cols=33  Identities=21%  Similarity=0.357  Sum_probs=25.7

Q ss_pred             CCCCccccccccchhccccHHHHHHHHHHhcCC
Q psy7463           8 LKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      .+.+++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            566777888888888888888888888877765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=9.6e-08  Score=52.83  Aligned_cols=34  Identities=18%  Similarity=0.269  Sum_probs=28.2

Q ss_pred             CCCCccccccccchhccccHHHHHHHHHHhcCCC
Q psy7463           8 LKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      ++.++++|.|++|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5677888888888888888888888888887763

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=1.1e-07  Score=52.69  Aligned_cols=34  Identities=12%  Similarity=0.322  Sum_probs=27.3

Q ss_pred             CCCCccccccccchhccccHHHHHHHHHHhcCCC
Q psy7463           8 LKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      .+.+++||.|++|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4567788888888888888888888888887653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.44  E-value=1.3e-07  Score=53.39  Aligned_cols=24  Identities=33%  Similarity=0.807  Sum_probs=10.8

Q ss_pred             ccccccccccCChHHHHHHHHHhc
Q psy7463         153 YACDRCDKRFSLLQNLKRHLAIHE  176 (319)
Q Consensus       153 ~~C~~C~~~f~~~~~L~~H~~~h~  176 (319)
                      |.|++|++.|.....|..|+++|.
T Consensus         7 ~~C~~C~k~f~~~~~L~~H~~~H~   30 (39)
T 1njq_A            7 YTCSFCKREFRSAQALGGHMNVHR   30 (39)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTC
T ss_pred             eECCCCCcccCCHHHHHHHHHHcC
Confidence            444444444444444444444444

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.44  E-value=1.8e-07  Score=58.92  Aligned_cols=35  Identities=17%  Similarity=0.266  Sum_probs=27.3

Q ss_pred             cccccc--cccccCChHHHHHHHHhhccccccccccc
Q psy7463         206 KYQCHI--CLKCTSRKNYLKRHIIMMHTKFEGQIGEM  240 (319)
Q Consensus       206 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~c~~  240 (319)
                      ||+|++  |++.|...++|..|++.+|++++||.|..
T Consensus        27 PYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           27 PYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            788865  88888888888888755788888877764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.42  E-value=1.6e-07  Score=50.89  Aligned_cols=27  Identities=30%  Similarity=0.593  Sum_probs=11.1

Q ss_pred             ccccccccccCChHHHHHHHHhhccccc
Q psy7463         207 YQCHICLKCTSRKNYLKRHIIMMHTKFE  234 (319)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~  234 (319)
                      |.|++|++.|...+.|..|++ .|.+++
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~-~H~~~~   29 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHIT-LHELLG   29 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH-HHTTTC
T ss_pred             ccCCCCCchhCCHHHHHHHHH-HhCCCC
Confidence            344444444444444444433 333333

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.2e-07  Score=53.06  Aligned_cols=33  Identities=21%  Similarity=0.441  Sum_probs=29.5

Q ss_pred             HhcCCCcccccc--chhhccCHHHHHHHHHhccCC
Q psy7463          36 KQHKGQLYECDC--CTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        36 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      .+++++||+|+.  |++.|.....|.+|+++|++.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            357899999986  999999999999999999863

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=5.4e-08  Score=54.30  Aligned_cols=34  Identities=18%  Similarity=0.481  Sum_probs=31.0

Q ss_pred             HHhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          35 KKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        35 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      ++|++++||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            4688999999999999999999999999998764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=7.1e-08  Score=53.85  Aligned_cols=34  Identities=24%  Similarity=0.452  Sum_probs=30.6

Q ss_pred             HHhcCCCccccccchhhccCHHHHHHH-HHhccCC
Q psy7463          35 KKQHKGQLYECDCCTEYFIDRIAYEEH-VRLHEGG   68 (319)
Q Consensus        35 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~   68 (319)
                      ++|++++||.|+.|++.|.....|..| ++.|.+.
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            468899999999999999999999999 8888753

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.37  E-value=1.6e-07  Score=55.88  Aligned_cols=32  Identities=22%  Similarity=0.458  Sum_probs=20.7

Q ss_pred             CCCccccccccchhccccHHHHHHHHH-HhcCC
Q psy7463           9 KDKVVPQKCPLCERLYKSVYRMKEHMK-KQHKG   40 (319)
Q Consensus         9 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~   40 (319)
                      |++++||.|.+|++.|.....|..|++ +|+++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            556666666666666666666666666 66654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.35  E-value=1.7e-07  Score=51.41  Aligned_cols=33  Identities=15%  Similarity=0.430  Sum_probs=30.0

Q ss_pred             HhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          36 KQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        36 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      +|++++||.|.+|++.|.....|..|++.|+++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            367899999999999999999999999998764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.35  E-value=1.8e-07  Score=51.23  Aligned_cols=33  Identities=24%  Similarity=0.504  Sum_probs=29.9

Q ss_pred             HhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          36 KQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        36 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      +|++++||.|.+|++.|.....|..|++.|+++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            367899999999999999999999999998764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.35  E-value=1.5e-08  Score=54.72  Aligned_cols=31  Identities=16%  Similarity=0.347  Sum_probs=27.2

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCCCcc
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKGQLY   43 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   43 (319)
                      +||.|++|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4789999999999999999999999888876

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.33  E-value=3.1e-07  Score=51.15  Aligned_cols=33  Identities=15%  Similarity=0.467  Sum_probs=26.0

Q ss_pred             CCCcccccccc--chhccccHHHHHHHHHHhcCCC
Q psy7463           9 KDKVVPQKCPL--CERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus         9 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      +++++||.|.+  |++.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            56778888874  8888888888888888887753

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.33  E-value=2.2e-08  Score=68.05  Aligned_cols=56  Identities=20%  Similarity=0.393  Sum_probs=37.7

Q ss_pred             HhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         144 LKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       144 ~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      .+|.++++ |.|++|++.|.....|..|+++|. ++||.|..|.    ....|..|.++|.+
T Consensus        18 ~~H~~~kp-y~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           18 GPRLQNST-YQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CSCCCCSC-EECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cccCCCCC-CcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            45667777 777777777777777777777776 6677776544    34445556666655

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.30  E-value=6e-07  Score=56.99  Aligned_cols=37  Identities=16%  Similarity=0.226  Sum_probs=20.6

Q ss_pred             CCCCccCchhhccCCHHHHHHHHHhcCCCcccccccc
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHMNMHNGFKYQCHICL  213 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~  213 (319)
                      ++||.|..|++.|.+.+.|..|+++|++....+.+++
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~   47 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYID   47 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCC
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCcccccccc
Confidence            4555565566666555556666555555544444443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.29  E-value=5.1e-07  Score=46.95  Aligned_cols=28  Identities=18%  Similarity=0.461  Sum_probs=22.6

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3688888888888888888888888765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=3.8e-07  Score=47.82  Aligned_cols=29  Identities=17%  Similarity=0.492  Sum_probs=21.6

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcCC
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      ++||.|+.|++.|.....|..|++.|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            35777777777777777777777777664

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=3.7e-07  Score=50.40  Aligned_cols=33  Identities=15%  Similarity=0.363  Sum_probs=30.0

Q ss_pred             HhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          36 KQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        36 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      .|.+++||.|.+|++.|.....|..|++.|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            478899999999999999999999999998753

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.28  E-value=3.2e-07  Score=50.56  Aligned_cols=23  Identities=22%  Similarity=0.436  Sum_probs=10.6

Q ss_pred             CCCCccCchhhccCCHHHHHHHH
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHM  199 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~  199 (319)
                      ++||.|+.||++|.+++.|..|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            34444444444444444444444

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=3.2e-07  Score=50.63  Aligned_cols=33  Identities=24%  Similarity=0.462  Sum_probs=30.0

Q ss_pred             HhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          36 KQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        36 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      +|.+++||.|.+|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            478899999999999999999999999998763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.26  E-value=4.8e-07  Score=47.00  Aligned_cols=29  Identities=21%  Similarity=0.505  Sum_probs=23.4

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCCC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      +||.|++|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47888888888888888888888887653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=3.2e-07  Score=50.65  Aligned_cols=33  Identities=24%  Similarity=0.624  Sum_probs=29.9

Q ss_pred             HhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          36 KQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        36 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      .|++++||.|.+|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            477899999999999999999999999998753

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.25  E-value=3.9e-07  Score=54.14  Aligned_cols=33  Identities=21%  Similarity=0.467  Sum_probs=29.3

Q ss_pred             HhcCCCccccccchhhccCHHHHHHHHH-hccCC
Q psy7463          36 KQHKGQLYECDCCTEYFIDRIAYEEHVR-LHEGG   68 (319)
Q Consensus        36 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~   68 (319)
                      +|++++||.|.+|++.|.....|..|++ +|.++
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            4789999999999999999999999999 88765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.25  E-value=3.4e-07  Score=47.68  Aligned_cols=28  Identities=14%  Similarity=0.348  Sum_probs=21.4

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4677888888888888888888777765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.24  E-value=5.8e-07  Score=47.08  Aligned_cols=30  Identities=23%  Similarity=0.430  Sum_probs=24.3

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCCCc
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKGQL   42 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   42 (319)
                      ++|.|++|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            468888888888888888888888887653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.23  E-value=5.7e-07  Score=45.99  Aligned_cols=25  Identities=24%  Similarity=0.626  Sum_probs=16.9

Q ss_pred             cccccccchhccccHHHHHHHHHHh
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQ   37 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h   37 (319)
                      +||.|+.|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4666777777777666666666665

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=5.1e-07  Score=49.75  Aligned_cols=33  Identities=24%  Similarity=0.443  Sum_probs=29.8

Q ss_pred             HhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          36 KQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        36 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      .|.++++|.|++|++.|.....|..|+++|.++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            467899999999999999999999999998763

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=2.3e-07  Score=51.66  Aligned_cols=33  Identities=27%  Similarity=0.628  Sum_probs=30.0

Q ss_pred             HhcCCCccccccchhhccCH-HHHHHHHHhccCC
Q psy7463          36 KQHKGQLYECDCCTEYFIDR-IAYEEHVRLHEGG   68 (319)
Q Consensus        36 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~   68 (319)
                      +|++++||.|+.|++.|... ..|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            57889999999999999999 9999999998753

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=1e-06  Score=55.93  Aligned_cols=42  Identities=14%  Similarity=0.283  Sum_probs=30.1

Q ss_pred             ccCCCCccccccccchhccccHHHHHHHHHHhcCCCccccccc
Q psy7463           6 SDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCC   48 (319)
Q Consensus         6 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (319)
                      ...+.+++||.|.+|++.|.....|..|+++|+++. ..+.++
T Consensus         5 ~~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~   46 (66)
T 2epp_A            5 SSGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYI   46 (66)
T ss_dssp             SCSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSC
T ss_pred             CCCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-cccccc
Confidence            344667788888888888888888888888887753 334433

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=6.2e-07  Score=45.84  Aligned_cols=24  Identities=21%  Similarity=0.675  Sum_probs=10.6

Q ss_pred             CCccCchhhccCCHHHHHHHHHhc
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      ||.|+.||+.|...+.|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHc
Confidence            344444444444444444444443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=5.4e-07  Score=46.49  Aligned_cols=26  Identities=31%  Similarity=0.737  Sum_probs=13.3

Q ss_pred             CCCccCchhhccCCHHHHHHHHHhcC
Q psy7463         178 IAYQCNVCDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~h~  203 (319)
                      ++|.|+.|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            34555555555555555555555443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.20  E-value=5e-07  Score=46.28  Aligned_cols=24  Identities=29%  Similarity=0.703  Sum_probs=11.7

Q ss_pred             CCccCchhhccCCHHHHHHHHHhc
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      ||.|+.||+.|...+.|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhc
Confidence            444445555554444444444443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=6.3e-07  Score=46.50  Aligned_cols=29  Identities=28%  Similarity=0.616  Sum_probs=23.6

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCCC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            47888888888888888888888887753

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.19  E-value=5.3e-07  Score=46.53  Aligned_cols=26  Identities=19%  Similarity=0.548  Sum_probs=16.5

Q ss_pred             cccccccchhccccHHHHHHHHHHhc
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~   38 (319)
                      +||.|+.|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=7.3e-07  Score=49.16  Aligned_cols=33  Identities=21%  Similarity=0.659  Sum_probs=29.6

Q ss_pred             HhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          36 KQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        36 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      .|.+++||.|+.|++.|.....|..|+++|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            367889999999999999999999999998763

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.19  E-value=1.1e-06  Score=45.55  Aligned_cols=26  Identities=27%  Similarity=0.726  Sum_probs=12.5

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      ||.|+.|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            34444444444444444444444443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.48  E-value=2.1e-07  Score=48.56  Aligned_cols=28  Identities=14%  Similarity=0.532  Sum_probs=21.1

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3677888888888777788887777664

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.18  E-value=4.9e-07  Score=46.31  Aligned_cols=25  Identities=36%  Similarity=0.774  Sum_probs=14.9

Q ss_pred             cccccccchhccccHHHHHHHHHHh
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQ   37 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h   37 (319)
                      +||.|+.|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666665554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.17  E-value=9.7e-07  Score=46.17  Aligned_cols=26  Identities=27%  Similarity=0.703  Sum_probs=13.2

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      ||.|+.|++.|.....|..|+++|.+
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhcc
Confidence            44555555555555555555555443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.47  E-value=2.4e-07  Score=48.72  Aligned_cols=28  Identities=18%  Similarity=0.435  Sum_probs=21.1

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5677777777777777777777777654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.16  E-value=8.9e-07  Score=46.94  Aligned_cols=28  Identities=14%  Similarity=0.443  Sum_probs=21.4

Q ss_pred             cccccc--cchhccccHHHHHHHHHHhcCC
Q psy7463          13 VPQKCP--LCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        13 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +||.|+  .|++.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            467786  7888888888888888777765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.15  E-value=3.9e-07  Score=53.84  Aligned_cols=36  Identities=14%  Similarity=0.315  Sum_probs=24.8

Q ss_pred             cccCCCCccccccc--cchhccccHHHHHHHHHHhcCC
Q psy7463           5 ESDLKDKVVPQKCP--LCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus         5 ~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +...|.+++||.|+  .|++.|...+.|..|+++|+++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            34456677777774  5777777777777777777665

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.15  E-value=9.3e-07  Score=47.22  Aligned_cols=29  Identities=17%  Similarity=0.383  Sum_probs=21.4

Q ss_pred             ccccccc--cchhccccHHHHHHHHHHhcCC
Q psy7463          12 VVPQKCP--LCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        12 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      ++||.|+  .|++.|.....|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            3577777  6777777777777777777765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.14  E-value=1.1e-06  Score=44.86  Aligned_cols=24  Identities=25%  Similarity=0.773  Sum_probs=12.0

Q ss_pred             CccCchhhccCCHHHHHHHHHhcC
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h~  203 (319)
                      |.|+.|++.|.+.+.|..|+++|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            445555555555555555554444

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.13  E-value=8.5e-07  Score=45.23  Aligned_cols=26  Identities=27%  Similarity=0.584  Sum_probs=16.2

Q ss_pred             ccccccchhccccHHHHHHHHHHhcC
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQHK   39 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~   39 (319)
                      ||.|+.|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46666666666666666666666654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.12  E-value=7.7e-07  Score=46.25  Aligned_cols=24  Identities=25%  Similarity=0.772  Sum_probs=10.1

Q ss_pred             CccCchhhccCCHHHHHHHHHhcC
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h~  203 (319)
                      |.|+.|++.|...+.|..|+++|.
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGGG
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhc
Confidence            344444444444444444444443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.11  E-value=1.9e-06  Score=48.11  Aligned_cols=29  Identities=34%  Similarity=0.635  Sum_probs=15.4

Q ss_pred             CCCCcccccc--ccccccCChHHHHHHHHHhc
Q psy7463         147 RGDKVFYACD--RCDKRFSLLQNLKRHLAIHE  176 (319)
Q Consensus       147 ~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~  176 (319)
                      .++++ |.|+  .|++.|.....|..|+++|.
T Consensus         2 ~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~   32 (38)
T 1bhi_A            2 SDDKP-FLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TTCCC-EECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCcc-eECCCCCCCcccCCHHHHHHHHHHhC
Confidence            34444 5555  35555555555555555554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.08  E-value=2.1e-06  Score=45.40  Aligned_cols=26  Identities=27%  Similarity=0.791  Sum_probs=14.0

Q ss_pred             CCccC--chhhccCCHHHHHHHHHhcCC
Q psy7463         179 AYQCN--VCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       179 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      ||.|+  .||+.|...+.|..|+++|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            45554  555555555555555555544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=5e-07  Score=47.07  Aligned_cols=26  Identities=31%  Similarity=0.699  Sum_probs=13.5

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      ||.|+.|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45555555555555555555555443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=5.1e-07  Score=45.72  Aligned_cols=24  Identities=29%  Similarity=0.714  Sum_probs=11.7

Q ss_pred             CCccCchhhccCCHHHHHHHHHhc
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      ||.|+.||+.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            444555555555555555554443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.05  E-value=1.3e-06  Score=45.22  Aligned_cols=23  Identities=26%  Similarity=0.768  Sum_probs=9.6

Q ss_pred             CccCchhhccCCHHHHHHHHHhc
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      |.|+.|++.|.....|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRIH   25 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHHH
T ss_pred             ccCCCCCCccCChhHHHHHHHHh
Confidence            34444444444444444444443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.05  E-value=1.8e-06  Score=47.87  Aligned_cols=32  Identities=22%  Similarity=0.407  Sum_probs=28.9

Q ss_pred             hcCCCcccccc--chhhccCHHHHHHHHHhccCC
Q psy7463          37 QHKGQLYECDC--CTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        37 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      |++++||.|.+  |++.|.....|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            67899999995  999999999999999998763

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.30  E-value=6.2e-07  Score=45.38  Aligned_cols=24  Identities=17%  Similarity=0.593  Sum_probs=15.7

Q ss_pred             ccccccchhccccHHHHHHHHHHh
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQ   37 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h   37 (319)
                      ||.|++|++.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            566666666666666666666655

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.02  E-value=2.6e-06  Score=44.43  Aligned_cols=24  Identities=29%  Similarity=0.688  Sum_probs=10.2

Q ss_pred             CccCchhhccCCHHHHHHHHHhcC
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h~  203 (319)
                      |.|+.|++.|...+.|..|+++|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHc
Confidence            444444444444444444444433

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.02  E-value=2.9e-06  Score=45.22  Aligned_cols=27  Identities=33%  Similarity=0.630  Sum_probs=14.1

Q ss_pred             CCCccC--chhhccCCHHHHHHHHHhcCC
Q psy7463         178 IAYQCN--VCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       178 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      +||.|+  .|++.|...+.|..|+++|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            345555  455555555555555555544

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=1.6e-06  Score=44.86  Aligned_cols=24  Identities=33%  Similarity=0.873  Sum_probs=10.1

Q ss_pred             CCccCchhhccCCHHHHHHHHHhc
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      ||.|+.|++.|.....|..|+++|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIH   25 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHh
Confidence            344444444444444444444443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.99  E-value=1.6e-06  Score=45.37  Aligned_cols=28  Identities=21%  Similarity=0.380  Sum_probs=19.7

Q ss_pred             cccccccchhccccHHHHHHH-HHHhcCC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEH-MKKQHKG   40 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~   40 (319)
                      +||.|+.|++.|.....|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            367777777777777777777 5666654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.23  E-value=8.8e-07  Score=46.40  Aligned_cols=26  Identities=23%  Similarity=0.721  Sum_probs=13.8

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      ||.|+.|++.|.+.+.|..|+++|++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            45555555555555555555555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.94  E-value=3.3e-07  Score=54.18  Aligned_cols=38  Identities=24%  Similarity=0.440  Sum_probs=32.6

Q ss_pred             HHHHHHhcCCCccccc--cchhhccCHHHHHHHHHhccCC
Q psy7463          31 KEHMKKQHKGQLYECD--CCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        31 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      ..|+..|++++||.|+  .|++.|.....|..|+++|.++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3455678999999996  7999999999999999998763

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.91  E-value=4e-06  Score=43.78  Aligned_cols=19  Identities=37%  Similarity=0.941  Sum_probs=8.6

Q ss_pred             ccccccccccCChHHHHHH
Q psy7463         207 YQCHICLKCTSRKNYLKRH  225 (319)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H  225 (319)
                      |.|+.|++.|.+.+.|..|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHH
T ss_pred             cCCcccCcccCChHHHHHH
Confidence            4444444444444444444

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.91  E-value=3.4e-07  Score=49.14  Aligned_cols=26  Identities=23%  Similarity=0.507  Sum_probs=13.0

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      ||.|+.||+.|...+.|..|+++|++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~   27 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFI   27 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHcc
Confidence            44555555555555555555554444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.84  E-value=6.6e-06  Score=42.47  Aligned_cols=25  Identities=20%  Similarity=0.639  Sum_probs=12.3

Q ss_pred             CCccC--chhhccCCHHHHHHHHHhcC
Q psy7463         179 AYQCN--VCDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       179 ~~~C~--~C~~~f~~~~~l~~H~~~h~  203 (319)
                      +|.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            34444  45555555555555554443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.80  E-value=7.8e-06  Score=42.17  Aligned_cols=25  Identities=20%  Similarity=0.420  Sum_probs=16.7

Q ss_pred             ccccc--cchhccccHHHHHHHHHHhc
Q psy7463          14 PQKCP--LCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        14 ~~~C~--~C~~~f~~~~~l~~H~~~h~   38 (319)
                      +|.|+  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  67766666666666666664

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.75  E-value=3.6e-05  Score=48.44  Aligned_cols=51  Identities=18%  Similarity=0.382  Sum_probs=43.0

Q ss_pred             ccccc--chhccccHHHHHHHHH-HhcCCC------ccccc--cchhhccCHHHHHHHHHhc
Q psy7463          15 QKCPL--CERLYKSVYRMKEHMK-KQHKGQ------LYECD--CCTEYFIDRIAYEEHVRLH   65 (319)
Q Consensus        15 ~~C~~--C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h   65 (319)
                      |.|.+  |++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            45655  9999999999999984 777655      79996  7999999999999998864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.61  E-value=0.00012  Score=45.95  Aligned_cols=48  Identities=21%  Similarity=0.371  Sum_probs=32.4

Q ss_pred             CccccCChhHHHHHHhHhcCCCC-----cccccc--ccccccCChHHHHHHHHHh
Q psy7463         128 CADTFCPRSNMLRHYLLKHRGDK-----VFYACD--RCDKRFSLLQNLKRHLAIH  175 (319)
Q Consensus       128 C~~~f~~~~~l~~H~~~~H~~~~-----~~~~C~--~C~~~f~~~~~L~~H~~~h  175 (319)
                      |++.|.+...|..|+...|.+.+     ..|.|.  .|++.+.....|..|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            77777777777777766676544     126775  5777777777777777653

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.51  E-value=0.0024  Score=46.14  Aligned_cols=26  Identities=19%  Similarity=0.420  Sum_probs=22.7

Q ss_pred             ccccccccchhccccHHHHHHHH--HHh
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHM--KKQ   37 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~--~~h   37 (319)
                      .+++.|.+|+..|.+...+..|.  +.|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH   57 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKH   57 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHH
Confidence            45799999999999999999999  444

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.46  E-value=0.0036  Score=45.21  Aligned_cols=22  Identities=23%  Similarity=0.315  Sum_probs=19.1

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy7463         206 KYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      .|.|.+|++.|.+...|..|+.
T Consensus        93 ~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           93 SKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TTEETTTTEECSSHHHHHHHHT
T ss_pred             CeEcCCCCCEeCCHHHHHHHHC
Confidence            5889999999999999998875

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.40  E-value=0.0047  Score=47.14  Aligned_cols=72  Identities=18%  Similarity=0.267  Sum_probs=33.6

Q ss_pred             cccccCChHHHHHHHHHhcCCCCccCchhhccCCHHHHHHHHHhcC-CCcccccccccccCChHHHHHHHHhhcccc
Q psy7463         158 CDKRFSLLQNLKRHLAIHERIAYQCNVCDKKYSRLSDYKIHMNMHN-GFKYQCHICLKCTSRKNYLKRHIIMMHTKF  233 (319)
Q Consensus       158 C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  233 (319)
                      |+..+. ...|..|...-.-.+..|+.|+..+ .+..|..|+...- ...-.|+.|+..+ ....|..|.. .+.+.
T Consensus        90 C~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~-~~~~l~~H~~-~~~~~  162 (170)
T 3hcs_A           90 CLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM-AFEDKEIHDQ-NCPLA  162 (170)
T ss_dssp             CCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE-EGGGHHHHHT-TCCC-
T ss_pred             CCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc-CHHHHHhHHH-hCcCh
Confidence            444432 3345555432223345555555555 3444555554322 2245566665544 3344555554 44443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.19  E-value=0.0012  Score=50.50  Aligned_cols=79  Identities=16%  Similarity=0.316  Sum_probs=53.1

Q ss_pred             ccccc--CCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHHHHHhc-CCCCccCchhhccCCHHHHHH
Q psy7463         121 IKLQC--NLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRHLAIHE-RIAYQCNVCDKKYSRLSDYKI  197 (319)
Q Consensus       121 ~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~  197 (319)
                      .+..|  ..|+..+ ....|..|. .. -.-.+ ..|+.|+..+ .+..|..|....- .++..|+.|+..+.. ..|..
T Consensus        81 l~v~C~n~GC~~~~-~~~~l~~H~-~~-C~~~~-v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~  154 (170)
T 3hcs_A           81 LMVKCPNEGCLHKM-ELRHLEDHQ-AH-CEFAL-MDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEI  154 (170)
T ss_dssp             SEEECCSTTCCCEE-EGGGHHHHH-TT-CTTSE-EECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHH
T ss_pred             cccCCCCCCCCcee-cHhHHHHHH-hc-CCcee-eECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHh
Confidence            34667  4677665 456777775 32 22334 6788888877 5667888886443 667778888887754 56888


Q ss_pred             HHHhcCCC
Q psy7463         198 HMNMHNGF  205 (319)
Q Consensus       198 H~~~h~~~  205 (319)
                      |..++.|.
T Consensus       155 H~~~~~~~  162 (170)
T 3hcs_A          155 HDQNCPLA  162 (170)
T ss_dssp             HHTTCCC-
T ss_pred             HHHhCcCh
Confidence            88887764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=96.17  E-value=0.0042  Score=32.90  Aligned_cols=28  Identities=21%  Similarity=0.400  Sum_probs=24.8

Q ss_pred             cccccccccccCChHHHHHHHHhhcccc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHTKF  233 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~  233 (319)
                      .|.||+|.+.|.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4899999999999999999999888753

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.00  E-value=0.0059  Score=34.55  Aligned_cols=23  Identities=17%  Similarity=0.215  Sum_probs=18.1

Q ss_pred             CcccccccccccCChHHHHHHHH
Q psy7463         205 FKYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       205 ~~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      .+|.|+.|+..|.....|+.|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            36788888888888888888877

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.00  E-value=0.0015  Score=46.40  Aligned_cols=31  Identities=32%  Similarity=0.615  Sum_probs=25.8

Q ss_pred             HHhcCCCccccccchhhccCHHHHHHHHHhc
Q psy7463          35 KKQHKGQLYECDCCTEYFIDRIAYEEHVRLH   65 (319)
Q Consensus        35 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   65 (319)
                      ..|+|+++|.|..|++.|.+...|..|+++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            3567888999999999999999999998753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.95  E-value=0.0015  Score=46.43  Aligned_cols=31  Identities=16%  Similarity=0.317  Sum_probs=27.2

Q ss_pred             cCCCCccccccccchhccccHHHHHHHHHHh
Q psy7463           7 DLKDKVVPQKCPLCERLYKSVYRMKEHMKKQ   37 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h   37 (319)
                      .-++|+++|.|..|++.|.+...|..|+++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            3467899999999999999999999998754

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.68  E-value=0.012  Score=33.24  Aligned_cols=25  Identities=20%  Similarity=0.448  Sum_probs=20.8

Q ss_pred             cccccccchhccccHHHHHHHHHHh
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQ   37 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h   37 (319)
                      .+|.|+.|++.|.....|+.||+-.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            6788888888888888888888743

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.91  E-value=0.022  Score=30.14  Aligned_cols=28  Identities=18%  Similarity=0.523  Sum_probs=24.5

Q ss_pred             ccccCCCccccCChhHHHHHHhHhcCCC
Q psy7463         122 KLQCNLCADTFCPRSNMLRHYLLKHRGD  149 (319)
Q Consensus       122 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  149 (319)
                      .|.|++|.+.|.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            3899999999999999999998888654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.82  E-value=0.057  Score=34.51  Aligned_cols=46  Identities=17%  Similarity=0.305  Sum_probs=33.5

Q ss_pred             CCCCccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccC
Q psy7463           8 LKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFID   54 (319)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   54 (319)
                      .+.....|.|+.||..++ +..|..|...-.+...|.|-.|+..|..
T Consensus         4 ~~~~MV~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A            4 GSSGMVFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             SSCCCCEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             CCCceeEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC
Confidence            344556788888888777 4678888776665567888888888864

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=91.21  E-value=0.16  Score=25.83  Aligned_cols=26  Identities=35%  Similarity=0.485  Sum_probs=21.2

Q ss_pred             cccccccccccCChHHHHHHHHhhcc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~  231 (319)
                      +-.|.+|.+.++.-.+|..|++..|.
T Consensus         9 kqhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            45688899999999999999887664

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.00  E-value=0.78  Score=24.30  Aligned_cols=26  Identities=19%  Similarity=0.397  Sum_probs=17.8

Q ss_pred             CccccccccchhccccHHHHHHHHHH
Q psy7463          11 KVVPQKCPLCERLYKSVYRMKEHMKK   36 (319)
Q Consensus        11 ~~~~~~C~~C~~~f~~~~~l~~H~~~   36 (319)
                      ...++.|..|+-.|.....+..|.+-
T Consensus         5 ~~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            5 EVMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             ccCcCeeccccceehhhHHHhhhhee
Confidence            34566777777777777777777653

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=87.28  E-value=0.47  Score=23.77  Aligned_cols=22  Identities=18%  Similarity=0.474  Sum_probs=18.2

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy7463         206 KYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      +|.|++|.........|+.|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4788888888888888888865

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=87.15  E-value=0.59  Score=23.81  Aligned_cols=27  Identities=22%  Similarity=0.566  Sum_probs=23.0

Q ss_pred             ccccCCCccccCChhHHHHHHhHhcCC
Q psy7463         122 KLQCNLCADTFCPRSNMLRHYLLKHRG  148 (319)
Q Consensus       122 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  148 (319)
                      +-.|..|.+.+....+|..|++..|..
T Consensus         9 kqhcrfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            357999999999999999999877754

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=86.69  E-value=1.1  Score=26.05  Aligned_cols=46  Identities=15%  Similarity=0.263  Sum_probs=26.2

Q ss_pred             cccCCCccccCChhHHHHHHhHhcCCCCccccccccc-cccCChHHHHHHHH
Q psy7463         123 LQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCD-KRFSLLQNLKRHLA  173 (319)
Q Consensus       123 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~-~~f~~~~~L~~H~~  173 (319)
                      ..|++|.....+...|..|...--.     -.||+|- ..-.+.+.|+.|.+
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~-----gqCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCIN-----GQCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTT-----TBCTTTCCBCCSSHHHHHHHHT
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCC-----CCCCcccCcCCcCHHHHHHHHH
Confidence            3566666666666777777533222     2455553 33456666776654

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=86.38  E-value=0.095  Score=33.32  Aligned_cols=13  Identities=15%  Similarity=0.478  Sum_probs=8.9

Q ss_pred             cccccccccccCC
Q psy7463         206 KYQCHICLKCTSR  218 (319)
Q Consensus       206 ~~~C~~C~~~f~~  218 (319)
                      .|+||.||..|.-
T Consensus        51 ~FkCP~CgEEFyG   63 (95)
T 2k5c_A           51 VFKCPVCGEEFYG   63 (95)
T ss_dssp             EEECTTTCCEEET
T ss_pred             hhcCCCccHHHhc
Confidence            3778888777643

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=84.28  E-value=0.48  Score=30.28  Aligned_cols=45  Identities=24%  Similarity=0.554  Sum_probs=26.0

Q ss_pred             cccCCCccccCChhHHHHHHhHhcCCCCccccccccccccCChHHHHHH
Q psy7463         123 LQCNLCADTFCPRSNMLRHYLLKHRGDKVFYACDRCDKRFSLLQNLKRH  171 (319)
Q Consensus       123 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~C~~C~~~f~~~~~L~~H  171 (319)
                      |.|+.||.++ .+..+..|. ..-.+... |.|-.|+..|.. ..++.|
T Consensus        11 F~C~~Cgd~l-KK~kv~~H~-~~Cr~~~~-~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           11 FTCNACGESV-KKIQVEKHV-SNCRNCEC-LSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEESSSCCEE-ETTHHHHHH-HHCTTCCE-EEETTTTEEEEG-GGTTTC
T ss_pred             EEcCCCCCee-ecccchhHH-hhCCCCCc-EEecccCCeeCC-CCEeCE
Confidence            6777777666 455667775 33333223 677777777754 334444

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.69  E-value=0.36  Score=30.88  Aligned_cols=27  Identities=26%  Similarity=0.463  Sum_probs=21.5

Q ss_pred             cccccccccccC-------ChHHHHHHHHhhccc
Q psy7463         206 KYQCHICLKCTS-------RKNYLKRHIIMMHTK  232 (319)
Q Consensus       206 ~~~C~~C~~~f~-------~~~~L~~H~~~~H~~  232 (319)
                      .-.|.+|++.+.       .-+.|++|++..|..
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            467888888887       356999999988865

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=83.44  E-value=1.4  Score=25.63  Aligned_cols=47  Identities=15%  Similarity=0.331  Sum_probs=34.9

Q ss_pred             ccccccchhccccHHHHHHHHHHhcCCCccccccchh-hccCHHHHHHHHH
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTE-YFIDRIAYEEHVR   63 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-~f~~~~~l~~H~~   63 (319)
                      .-.|++|.....+...|..|..+-..   -+|++|-. ...+...|+.|.+
T Consensus         3 smvC~~C~~ECET~kEl~~H~~sCp~---gqCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            3 SMVCDVCHHECETAKELESHRQSCIN---GQCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             TTBCTTTCCBCSSTTTHHHHHHHHTT---TBCTTTCCBCCSSHHHHHHHHT
T ss_pred             cchhhHHHhhhhhHHHHHHHhccCCC---CCCCcccCcCCcCHHHHHHHHH
Confidence            35788888888888899999887754   36777743 4567778888865

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=83.14  E-value=0.65  Score=30.37  Aligned_cols=29  Identities=24%  Similarity=0.326  Sum_probs=20.4

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcCCCcc
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHKGQLY   43 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   43 (319)
                      ..-..|-+||+.|+.   |.+|+.+++|..|.
T Consensus        19 ~d~iiClecGK~fK~---LkRHL~~~hgltpe   47 (87)
T 2jsp_A           19 DDHIVCLECGGSFKS---LKRHLTTHHSMTPE   47 (87)
T ss_dssp             SSCEECTBTCCEESB---HHHHHHHTTCSCHH
T ss_pred             CCceEecccchhhHH---HHHHHHHccCCCHH
Confidence            445678888888885   66888887766553

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=82.91  E-value=0.86  Score=24.13  Aligned_cols=22  Identities=18%  Similarity=0.138  Sum_probs=17.2

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy7463         206 KYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      ++.|..|+-.|.+..++..|.+
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHH
T ss_pred             cCeeccccceehhhHHHhhhhe
Confidence            4778888888888888888865

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=80.72  E-value=0.86  Score=25.69  Aligned_cols=12  Identities=33%  Similarity=0.778  Sum_probs=7.3

Q ss_pred             cccCCCccccCC
Q psy7463         123 LQCNLCADTFCP  134 (319)
Q Consensus       123 ~~C~~C~~~f~~  134 (319)
                      |.|-.||+.|..
T Consensus         4 Y~C~rCg~~fs~   15 (48)
T 4ayb_P            4 YRCGKCWKTFTD   15 (48)
T ss_dssp             -CCCCTTTTCCC
T ss_pred             EEeeccCCCccH
Confidence            667777777644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	319
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.003
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 153 YACDRCDKRFSLLQNLKRHLAIHER-IAYQCNVCDKKYSRLSDYKIHMNMH 202
           Y C  C K F+      RH+++H     Y C VC KK+        HM +H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (75), Expect = 0.003
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 180 YQCNVCDKKYSRLSDYKIHMNMHNG-FKYQCHICLKCTSRKNYLKRH 225
           Y C  C K ++  S    HM+MH G   Y C +C K    K++L  H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 49

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.003
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 146 HRGDKVFYACDRCDKRFSLLQNLKRHLAIH 175
           H G+K  Y C  C K FS    L +H  +H
Sbjct: 2   HSGEK-PYGCVECGKAFSRSSILVQHQRVH 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	319
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.66
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.59
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.3
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.24
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.19
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.19
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.13
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.11
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.1
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.1
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.07
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.05
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.03
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.03
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.02
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.02
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.01
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.01
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.0
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.99
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.93
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.86
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.81
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.8
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.77
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.77
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.76
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.7
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.68
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.67
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.61
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.6
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.54
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.49
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.48
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.48
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.42
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.41
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.4
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.37
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.31
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.25
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.23
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.21
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.17
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.16
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.91
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.88
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.85
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.83
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.79
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.79
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.77
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.74
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.69
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.63
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.62
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.57
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.49
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.49
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.43
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.42
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.39
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.38
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.37
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.33
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	97.32
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.31
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.3
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.3
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.25
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.21
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	97.15
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.14
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.07
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.06
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.02
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.9
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.89
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.86
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.84
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.83
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.8
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.49
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.32
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.3
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.21
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.17
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.08
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.06
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.03
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.67
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.48
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.45
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.32
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.93
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.6
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.5
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.46
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.42
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.89
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.71
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.69
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.39
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.9
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.67
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	92.55
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.28
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.2
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.06
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	91.59
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.94
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	90.9
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.37
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.06
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.43
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	88.9
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.89
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	88.08
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	86.66
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	85.01
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	85.01
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	83.63
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	82.32
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	81.26
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	81.08
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	80.81

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2e-17  Score=100.11  Aligned_cols=53  Identities=19%  Similarity=0.401  Sum_probs=51.1

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcCCCccccccchhhccCHHHHHHHHHhc
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLH   65 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   65 (319)
                      ++||+|+ ||+.|.....|..|+++|++++||.|++|++.|.....|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 9999999999999999999999999999999999999999999876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.4e-16  Score=94.57  Aligned_cols=50  Identities=34%  Similarity=0.638  Sum_probs=31.8

Q ss_pred             CCCCccCchhhccCCHHHHHHHHHhcCCC-cccccccccccCChHHHHHHHH
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHMNMHNGF-KYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      ++||.|+ ||++|.....|..|+++|+|+ ||.|++|++.|...+.|..|++
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            3566663 666666666666666666665 5666666666666666666655

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=6.3e-13  Score=72.73  Aligned_cols=37  Identities=16%  Similarity=0.361  Sum_probs=34.2

Q ss_pred             CccccccccchhccccHHHHHHHHH-HhcCCCcccccc
Q psy7463          11 KVVPQKCPLCERLYKSVYRMKEHMK-KQHKGQLYECDC   47 (319)
Q Consensus        11 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   47 (319)
                      -++||+|++||+.|...+.|.+|++ +|++++||.|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4789999999999999999999986 699999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.7e-12  Score=71.16  Aligned_cols=37  Identities=11%  Similarity=0.201  Sum_probs=32.3

Q ss_pred             ccccCCCCccccccccchhccccHHHHHHHHHHhcCC
Q psy7463           4 YESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus         4 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      .|+++|++++||.|++||+.|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5788888999999999999999999999999888875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=5.4e-12  Score=68.93  Aligned_cols=35  Identities=31%  Similarity=0.381  Sum_probs=25.2

Q ss_pred             CcccccccccccCChHHHHHHHHhhcccccccccc
Q psy7463         205 FKYQCHICLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       205 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      +||+|.+||+.|...++|..|++.+|++++||.|.
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            46777777777777777777776667777777775

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=5.5e-12  Score=66.10  Aligned_cols=33  Identities=12%  Similarity=0.311  Sum_probs=23.5

Q ss_pred             CCCCccccccccchhccccHHHHHHHHHHhcCC
Q psy7463           8 LKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +|++++||+|.+|++.|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            466777777777777777777777777777664

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2.2e-12  Score=70.76  Aligned_cols=37  Identities=27%  Similarity=0.494  Sum_probs=34.9

Q ss_pred             HHHHHhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          32 EHMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        32 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      +|+++|++++||.|+.|++.|...+.|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5788999999999999999999999999999999875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2.5e-11  Score=65.41  Aligned_cols=34  Identities=18%  Similarity=0.450  Sum_probs=24.2

Q ss_pred             cCCCCccccccccchhccccHHHHHHHHHHhcCC
Q psy7463           7 DLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      ++|++++||+|.+|++.|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4567777777777777777777777777777654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.7e-11  Score=64.16  Aligned_cols=33  Identities=24%  Similarity=0.433  Sum_probs=31.2

Q ss_pred             HhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          36 KQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        36 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      +|++++||.|..|++.|...+.|..|+++|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999874

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=2.3e-11  Score=66.11  Aligned_cols=34  Identities=21%  Similarity=0.465  Sum_probs=23.3

Q ss_pred             cccCCCCccccccccchhccccHHHHHHHHHHhc
Q psy7463           5 ESDLKDKVVPQKCPLCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus         5 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   38 (319)
                      |.+.|++++||+|++|++.|...+.|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            5566777777777777777777777777766664

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=1.1e-11  Score=67.39  Aligned_cols=35  Identities=14%  Similarity=0.193  Sum_probs=32.6

Q ss_pred             HHHHhcCCCccccccchhhccCHHHHHHHHHhccC
Q psy7463          33 HMKKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEG   67 (319)
Q Consensus        33 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   67 (319)
                      |.++|++++||+|++|++.|.++..|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67899999999999999999999999999999854

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.5e-11  Score=65.44  Aligned_cols=34  Identities=15%  Similarity=0.387  Sum_probs=31.8

Q ss_pred             HHhcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          35 KKQHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        35 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      ++|+|++||+|.+|++.|.....|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4799999999999999999999999999999864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.05  E-value=4.3e-11  Score=60.83  Aligned_cols=29  Identities=17%  Similarity=0.462  Sum_probs=24.2

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCCC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      +||.|++|++.|...+.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57888888888888888888888888875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.03  E-value=5.2e-11  Score=59.70  Aligned_cols=28  Identities=18%  Similarity=0.520  Sum_probs=20.3

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcC
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHK   39 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   39 (319)
                      ++||+|++|++.|...+.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4677777777777777777777777764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.03  E-value=6.4e-11  Score=62.87  Aligned_cols=32  Identities=16%  Similarity=0.341  Sum_probs=20.3

Q ss_pred             CCCccccccccchhccccHHHHHHHHHHhcCC
Q psy7463           9 KDKVVPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus         9 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      ++|++||+|++|++.|.....|.+|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            45666666666666666666666666666543

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=6.9e-11  Score=63.32  Aligned_cols=34  Identities=29%  Similarity=0.616  Sum_probs=31.4

Q ss_pred             cccccc--chhccccHHHHHHHHHHhcCCCcccccc
Q psy7463          14 PQKCPL--CERLYKSVYRMKEHMKKQHKGQLYECDC   47 (319)
Q Consensus        14 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~   47 (319)
                      .|.|++  |++.|.+.+.|.+|+++|+|++||.|+.
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            378987  9999999999999999999999999973

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=3.6e-11  Score=60.28  Aligned_cols=28  Identities=29%  Similarity=0.785  Sum_probs=18.0

Q ss_pred             CCCCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         177 RIAYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       177 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      ++||+|++|+++|..++.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3566666666666666666666666654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.2e-10  Score=62.63  Aligned_cols=33  Identities=21%  Similarity=0.439  Sum_probs=23.4

Q ss_pred             cCCCCccccccccchhccccHHHHHHHHHHhcC
Q psy7463           7 DLKDKVVPQKCPLCERLYKSVYRMKEHMKKQHK   39 (319)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   39 (319)
                      ++|+|++||+|++|++.|.....|..|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            467777777777777777777777777665554

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=7.4e-11  Score=62.61  Aligned_cols=32  Identities=16%  Similarity=0.455  Sum_probs=30.2

Q ss_pred             hcCCCccccccchhhccCHHHHHHHHHhccCC
Q psy7463          37 QHKGQLYECDCCTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        37 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      |+|++||+|.+|++.|.+...|.+|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=8.3e-11  Score=59.60  Aligned_cols=29  Identities=17%  Similarity=0.487  Sum_probs=24.7

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCCC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      +||.|++|++.|...+.|.+|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58888888888888888888888888875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.99  E-value=1.3e-10  Score=59.02  Aligned_cols=28  Identities=25%  Similarity=0.599  Sum_probs=17.9

Q ss_pred             CCCccCchhhccCCHHHHHHHHHhcCCC
Q psy7463         178 IAYQCNVCDKKYSRLSDYKIHMNMHNGF  205 (319)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  205 (319)
                      +||.|++||++|...+.|..|+++|+|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            3566666666666666666666666654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.2e-10  Score=61.49  Aligned_cols=33  Identities=33%  Similarity=0.630  Sum_probs=23.8

Q ss_pred             HhcCCC-cccccccccccCChHHHHHHHHhhccc
Q psy7463         200 NMHNGF-KYQCHICLKCTSRKNYLKRHIIMMHTK  232 (319)
Q Consensus       200 ~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~  232 (319)
                      ++|+|+ ||+|++|++.|..+++|.+|++.+|++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            356776 677777777777777777777666654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.4e-10  Score=57.86  Aligned_cols=28  Identities=21%  Similarity=0.542  Sum_probs=17.1

Q ss_pred             CCCccCchhhccCCHHHHHHHHHhcCCC
Q psy7463         178 IAYQCNVCDKKYSRLSDYKIHMNMHNGF  205 (319)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  205 (319)
                      +||.|++||++|.+++.|..|+++|+|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            3566666666666666666666666554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=4.9e-10  Score=54.55  Aligned_cols=26  Identities=19%  Similarity=0.442  Sum_probs=19.5

Q ss_pred             cccccccchhccccHHHHHHHHHHhc
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~   38 (319)
                      +||+|.+|||.|...+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            47777777777777777777777764

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=4.8e-10  Score=54.56  Aligned_cols=24  Identities=33%  Similarity=0.661  Sum_probs=12.3

Q ss_pred             CCccCchhhccCCHHHHHHHHHhc
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      ||.|..||++|...+.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            455555555555555555555544

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.4e-09  Score=55.35  Aligned_cols=28  Identities=25%  Similarity=0.714  Sum_probs=22.2

Q ss_pred             ccccccc--chhccccHHHHHHHHHHhcCC
Q psy7463          13 VPQKCPL--CERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        13 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +||.|++  |++.|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888775

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=2.2e-09  Score=54.57  Aligned_cols=27  Identities=41%  Similarity=0.846  Sum_probs=17.8

Q ss_pred             CCCccCc--hhhccCCHHHHHHHHHhcCC
Q psy7463         178 IAYQCNV--CDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       178 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  204 (319)
                      +||+|++  |+++|.+.+.|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            4666666  66666666666666666665

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.6e-09  Score=55.22  Aligned_cols=28  Identities=14%  Similarity=0.580  Sum_probs=22.3

Q ss_pred             ccccccc--chhccccHHHHHHHHHHhcCC
Q psy7463          13 VPQKCPL--CERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        13 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +||.|++  |++.|.+.+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5788876  888888888888888888775

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=6.6e-10  Score=63.47  Aligned_cols=34  Identities=15%  Similarity=0.446  Sum_probs=25.6

Q ss_pred             CCCCcccccccc--chhccccHHHHHHHHHHhcCCC
Q psy7463           8 LKDKVVPQKCPL--CERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus         8 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      .+.+++||.|++  |++.|...+.|..|+++|+|++
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            367777777766  7777777777777777777764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=3e-09  Score=54.67  Aligned_cols=29  Identities=14%  Similarity=0.445  Sum_probs=23.4

Q ss_pred             cccccc--cchhccccHHHHHHHHHHhcCCC
Q psy7463          13 VPQKCP--LCERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus        13 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      +||.|+  .|++.|...++|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578885  48888888888888888888874

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=2.4e-09  Score=54.54  Aligned_cols=26  Identities=31%  Similarity=0.818  Sum_probs=13.4

Q ss_pred             CCccCc--hhhccCCHHHHHHHHHhcCC
Q psy7463         179 AYQCNV--CDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       179 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  204 (319)
                      ||.|++  ||++|...+.|..|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            455544  55555555555555555544

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=3.8e-09  Score=56.37  Aligned_cols=32  Identities=31%  Similarity=0.498  Sum_probs=19.6

Q ss_pred             ccccc--cccccCChHHHHHHHHhhcccccccccc
Q psy7463         207 YQCHI--CLKCTSRKNYLKRHIIMMHTKFEGQIGE  239 (319)
Q Consensus       207 ~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~c~  239 (319)
                      |.|++  |++.|.++..|++|++ .|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r-~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH-HHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccC-eeCCCCCEeCC
Confidence            45554  6666666666666666 56666666664

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.1e-08  Score=52.58  Aligned_cols=28  Identities=25%  Similarity=0.642  Sum_probs=16.5

Q ss_pred             CCCccCc--hhhccCCHHHHHHHHHhcCCC
Q psy7463         178 IAYQCNV--CDKKYSRLSDYKIHMNMHNGF  205 (319)
Q Consensus       178 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  205 (319)
                      +||.|++  ||++|...+.|..|+++|+|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            3566643  666666666666666666554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.60  E-value=6.6e-10  Score=63.48  Aligned_cols=39  Identities=23%  Similarity=0.474  Sum_probs=34.7

Q ss_pred             HHHHHHHHhcCCCcccccc--chhhccCHHHHHHHHHhccCC
Q psy7463          29 RMKEHMKKQHKGQLYECDC--CTEYFIDRIAYEEHVRLHEGG   68 (319)
Q Consensus        29 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   68 (319)
                      .|..|+. |++++||.|.+  |++.|.....|..|+++|+++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            4566774 99999999987  999999999999999999874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.54  E-value=1.2e-08  Score=51.24  Aligned_cols=27  Identities=22%  Similarity=0.677  Sum_probs=20.2

Q ss_pred             ccccccc--chhccccHHHHHHHHHHhcC
Q psy7463          13 VPQKCPL--CERLYKSVYRMKEHMKKQHK   39 (319)
Q Consensus        13 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   39 (319)
                      +||+|++  |++.|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4777766  77777777777777777765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.49  E-value=3.3e-08  Score=50.93  Aligned_cols=27  Identities=33%  Similarity=0.646  Sum_probs=14.9

Q ss_pred             CCCccCc--hhhccCCHHHHHHHHHhcCC
Q psy7463         178 IAYQCNV--CDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       178 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  204 (319)
                      +||.|++  |+++|.+.+.|..|+++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            4555555  55555555555555555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.48  E-value=2.6e-08  Score=51.31  Aligned_cols=28  Identities=18%  Similarity=0.439  Sum_probs=19.0

Q ss_pred             cccccccc--chhccccHHHHHHHHHHhcC
Q psy7463          12 VVPQKCPL--CERLYKSVYRMKEHMKKQHK   39 (319)
Q Consensus        12 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~   39 (319)
                      ++||.|++  |++.|.+.++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            45677766  77777777777777776654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=1.1e-08  Score=51.35  Aligned_cols=25  Identities=40%  Similarity=0.995  Sum_probs=12.6

Q ss_pred             CCccCc--hhhccCCHHHHHHHHHhcC
Q psy7463         179 AYQCNV--CDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       179 ~~~C~~--C~~~f~~~~~l~~H~~~h~  203 (319)
                      ||+|++  |+++|.+.+.|..|+++|+
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccC
Confidence            455544  5555555555555555544

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=7.2e-08  Score=44.19  Aligned_cols=26  Identities=42%  Similarity=0.816  Sum_probs=15.0

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      |.+|++|++-|+.+..|+.|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            34566666666666666666665543

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=3e-08  Score=49.18  Aligned_cols=24  Identities=33%  Similarity=0.819  Sum_probs=12.4

Q ss_pred             CCccCc--hhhccCCHHHHHHHHHhc
Q psy7463         179 AYQCNV--CDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       179 ~~~C~~--C~~~f~~~~~l~~H~~~h  202 (319)
                      ||.|++  ||++|.+.++|+.|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            455544  555555555555555544

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=3.2e-08  Score=49.08  Aligned_cols=26  Identities=23%  Similarity=0.663  Sum_probs=19.9

Q ss_pred             ccccccc--chhccccHHHHHHHHHHhc
Q psy7463          13 VPQKCPL--CERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        13 ~~~~C~~--C~~~f~~~~~l~~H~~~h~   38 (319)
                      +||.|++  |++.|.+.++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4777876  8888888888888887774

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=6.4e-08  Score=44.36  Aligned_cols=26  Identities=27%  Similarity=0.715  Sum_probs=16.8

Q ss_pred             ccccccchhccccHHHHHHHHHHhcC
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQHK   39 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~   39 (319)
                      |++|+.|++.|+.+..|..||+.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45666666666666666666666653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1e-07  Score=47.09  Aligned_cols=32  Identities=19%  Similarity=0.617  Sum_probs=29.2

Q ss_pred             cccccccchhccccHHHHHHHHHHhcCCCccc
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHKGQLYE   44 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   44 (319)
                      +...|+.||+.|.....|.+|..+|++++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            34689999999999999999999999999983

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=2.2e-07  Score=44.10  Aligned_cols=25  Identities=28%  Similarity=0.841  Sum_probs=15.1

Q ss_pred             CCCccCchhhccCCHHHHHHHHHhc
Q psy7463         178 IAYQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      +||.|.+||+.|......+.|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4566666666666666666666555

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=3.4e-07  Score=44.04  Aligned_cols=28  Identities=29%  Similarity=0.602  Sum_probs=21.1

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcC
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHK   39 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   39 (319)
                      ++||.|++|+..|+.+..+..|.++|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4677777777777777777777777765

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=4.2e-07  Score=43.75  Aligned_cols=27  Identities=30%  Similarity=0.752  Sum_probs=16.7

Q ss_pred             CCCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         178 IAYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      +||.|++|+..|..+..+..|.+.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            566666666666666666666666654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.17  E-value=3.8e-07  Score=43.28  Aligned_cols=26  Identities=27%  Similarity=0.496  Sum_probs=15.6

Q ss_pred             ccccccccchhccccHHHHHHHHHHh
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQ   37 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h   37 (319)
                      ++||.|++||+.|.......+|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            35666666666666666666665555

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=9e-07  Score=41.87  Aligned_cols=28  Identities=18%  Similarity=0.284  Sum_probs=24.8

Q ss_pred             ccccccchhccccHHHHHHHHHHhcCCC
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      .|.|++|+......+.|+.|+++|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            4889999999999999999999998864

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2.7e-06  Score=39.94  Aligned_cols=27  Identities=22%  Similarity=0.634  Sum_probs=17.1

Q ss_pred             CCCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         178 IAYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      +||+|.+|.+.-.+.+.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            466666666666666666666666655

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=3.6e-06  Score=39.50  Aligned_cols=27  Identities=22%  Similarity=0.485  Sum_probs=13.4

Q ss_pred             CccccccchhhccCHHHHHHHHHhccC
Q psy7463          41 QLYECDCCTEYFIDRIAYEEHVRLHEG   67 (319)
Q Consensus        41 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   67 (319)
                      +||+|.+|...-.+.+.|..|++.|++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            445555555555555555555554443

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=6.9e-06  Score=38.96  Aligned_cols=28  Identities=36%  Similarity=0.565  Sum_probs=22.2

Q ss_pred             cccccccccccCChHHHHHHHHhhcccc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHTKF  233 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~  233 (319)
                      ||+|..|.+.....++|+.|++..|+.+
T Consensus         2 py~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccccccccccccchhhhhhhhcccccC
Confidence            6788888888888888888888777764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=5e-06  Score=40.01  Aligned_cols=25  Identities=28%  Similarity=0.735  Sum_probs=13.3

Q ss_pred             CCccCc--hhhccCCHHHHHHHHHhcC
Q psy7463         179 AYQCNV--CDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       179 ~~~C~~--C~~~f~~~~~l~~H~~~h~  203 (319)
                      ||.|.+  |++++...+.|+.|++.++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            455544  5555555555555555443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=6.9e-06  Score=39.50  Aligned_cols=27  Identities=30%  Similarity=0.677  Sum_probs=16.7

Q ss_pred             ccccccc--chhccccHHHHHHHHHHhcC
Q psy7463          13 VPQKCPL--CERLYKSVYRMKEHMKKQHK   39 (319)
Q Consensus        13 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   39 (319)
                      +||.|.+  |++.|...+.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4666655  66666666666666665543

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=9.4e-06  Score=38.31  Aligned_cols=25  Identities=28%  Similarity=0.561  Sum_probs=15.4

Q ss_pred             CccCchhhccCCHHHHHHHHHhcCC
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      |.|+.||......+-|+.|+++|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccccCcccCCHHHHHHHHHHhcC
Confidence            5566666666666666666666654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.77  E-value=1e-05  Score=38.08  Aligned_cols=29  Identities=14%  Similarity=0.398  Sum_probs=24.4

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcCC
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +..|.|..|...|...-.|+.||.+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45688899999999988899999888875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=5.9e-06  Score=38.55  Aligned_cols=26  Identities=15%  Similarity=0.395  Sum_probs=17.8

Q ss_pred             cccccchhccccHHHHHHHHHHhcCC
Q psy7463          15 QKCPLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        15 ~~C~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +.|.+||+.|...+.|.+|+..|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46777777777777777777766654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=8.1e-06  Score=38.07  Aligned_cols=24  Identities=33%  Similarity=0.623  Sum_probs=12.0

Q ss_pred             ccCchhhccCCHHHHHHHHHhcCC
Q psy7463         181 QCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       181 ~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      .|..||++|...+.|++|..+|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            345555555555555555555444

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.63  E-value=2.2e-05  Score=35.99  Aligned_cols=26  Identities=31%  Similarity=0.709  Sum_probs=22.3

Q ss_pred             ccccchhccccHHHHHHHHHHhcCCC
Q psy7463          16 KCPLCERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus        16 ~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      +|+.|.+.|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58888999998888999988888874

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.62  E-value=1.4e-05  Score=38.80  Aligned_cols=27  Identities=30%  Similarity=0.715  Sum_probs=23.4

Q ss_pred             cccccccccccCChHHHHHHHHhhccc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHTK  232 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  232 (319)
                      ||.|.+|++.|.++.-|.+|....|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            688999999999999999998878875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.57  E-value=2.4e-05  Score=40.71  Aligned_cols=30  Identities=20%  Similarity=0.531  Sum_probs=24.8

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcCCC
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHKGQ   41 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (319)
                      .+.|+|.+|++.|.+...|--||+.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            456899999999999999999998886543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=3.2e-05  Score=35.89  Aligned_cols=24  Identities=29%  Similarity=0.710  Sum_probs=10.1

Q ss_pred             CCccCchhhccCCHHHHHHHHHhc
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      ||+|..|.+.-...+.|..|+++|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            344444444444444444444443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=4.1e-05  Score=36.18  Aligned_cols=27  Identities=22%  Similarity=0.528  Sum_probs=21.9

Q ss_pred             cccccccccccCChHHHHHHHHhhccc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHTK  232 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  232 (319)
                      ||+|.+|.....+.++|..|++..|.+
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CcccceecccccCcchHHHHHHHHccC
Confidence            788888888888888888888877753

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.43  E-value=4.3e-05  Score=34.43  Aligned_cols=21  Identities=33%  Similarity=0.687  Sum_probs=12.0

Q ss_pred             ccccccccccCChHHHHHHHH
Q psy7463         207 YQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      |+|..|.+.|..++.|.+|.+
T Consensus         1 ykcglcersfveksalsrhqr   21 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQR   21 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGG
T ss_pred             CcccchHHHHHHHHHHHHHHH
Confidence            455555555555555555555

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.42  E-value=4.1e-05  Score=34.48  Aligned_cols=24  Identities=33%  Similarity=0.887  Sum_probs=16.6

Q ss_pred             cccccchhhccCHHHHHHHHHhcc
Q psy7463          43 YECDCCTEYFIDRIAYEEHVRLHE   66 (319)
Q Consensus        43 ~~C~~C~~~f~~~~~l~~H~~~h~   66 (319)
                      |+|.+|.+.|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            567777777777777777776654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=5e-05  Score=35.78  Aligned_cols=23  Identities=26%  Similarity=0.521  Sum_probs=20.6

Q ss_pred             cccccccccccCChHHHHHHHHh
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIM  228 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~  228 (319)
                      ||.|..|...|.++++|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68899999999999999999973

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.38  E-value=6.8e-05  Score=34.33  Aligned_cols=24  Identities=42%  Similarity=0.537  Sum_probs=13.0

Q ss_pred             cccccccccCChHHHHHHHHhhccc
Q psy7463         208 QCHICLKCTSRKNYLKRHIIMMHTK  232 (319)
Q Consensus       208 ~C~~C~~~f~~~~~L~~H~~~~H~~  232 (319)
                      +|+.|.+.|.++..|+.|-+ .|++
T Consensus         2 qcp~c~k~f~skyylkvhnr-~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNR-KHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHH-HHSS
T ss_pred             cCcchHHHHHHhHhhhhccc-cccC
Confidence            45555555555555555555 4444

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=3.4e-05  Score=37.90  Aligned_cols=28  Identities=29%  Similarity=0.383  Sum_probs=14.2

Q ss_pred             cccccccccCChHHHHHHHHhhccccccc
Q psy7463         208 QCHICLKCTSRKNYLKRHIIMMHTKFEGQ  236 (319)
Q Consensus       208 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~  236 (319)
                      .|..||+.|.....|.+|.. .|++++||
T Consensus         7 ~ce~cgk~frdvyhlnrhkl-shs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKL-SHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGG-GSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhc-ccCCCCCC
Confidence            45555555555555555543 45555544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.33  E-value=6e-05  Score=35.39  Aligned_cols=22  Identities=41%  Similarity=0.531  Sum_probs=16.6

Q ss_pred             cccccc--cccccCChHHHHHHHH
Q psy7463         206 KYQCHI--CLKCTSRKNYLKRHII  227 (319)
Q Consensus       206 ~~~C~~--C~~~f~~~~~L~~H~~  227 (319)
                      ||+|+.  |++.|...+.|++|.+
T Consensus         3 py~c~hegcdk~fs~ps~lkrhek   26 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEK   26 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhh
Confidence            677776  7777777777777766

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.32  E-value=7.7e-05  Score=33.71  Aligned_cols=24  Identities=33%  Similarity=0.847  Sum_probs=21.0

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy7463         207 YQCHICLKCTSRKNYLKRHIIMMH  230 (319)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H~~~~H  230 (319)
                      |.|++|-+.|+++.++..|++..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999999988776

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=7.6e-05  Score=35.32  Aligned_cols=27  Identities=26%  Similarity=0.598  Sum_probs=20.2

Q ss_pred             CCCccCchhhccCCHHHHHHHHHhcCC
Q psy7463         178 IAYQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       178 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      +||.|..|.......++|+.|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            477888888887788888888777543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=8.2e-05  Score=38.75  Aligned_cols=25  Identities=16%  Similarity=0.514  Sum_probs=15.8

Q ss_pred             CccccccccchhccccHHHHHHHHH
Q psy7463          11 KVVPQKCPLCERLYKSVYRMKEHMK   35 (319)
Q Consensus        11 ~~~~~~C~~C~~~f~~~~~l~~H~~   35 (319)
                      |.+||.|..|+|.|-....+.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            4566666666666666666666654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=9e-05  Score=34.36  Aligned_cols=25  Identities=20%  Similarity=0.513  Sum_probs=13.8

Q ss_pred             cccccccchhccccHHHHHHHHHHh
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQ   37 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h   37 (319)
                      +||+|..|...-...+.|..|+++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            4555555555555555555555554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.25  E-value=0.0001  Score=34.56  Aligned_cols=25  Identities=32%  Similarity=0.773  Sum_probs=17.8

Q ss_pred             ccccccc--chhccccHHHHHHHHHHh
Q psy7463          13 VPQKCPL--CERLYKSVYRMKEHMKKQ   37 (319)
Q Consensus        13 ~~~~C~~--C~~~f~~~~~l~~H~~~h   37 (319)
                      .||+|+.  |++.|...+.|.+|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677755  777777777777777665

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=7.6e-05  Score=35.13  Aligned_cols=23  Identities=30%  Similarity=0.686  Sum_probs=12.7

Q ss_pred             ccccccchhccccHHHHHHHHHH
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKK   36 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~   36 (319)
                      ||.|..|+..|+++-+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            45555555555555555555553

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00017  Score=33.38  Aligned_cols=26  Identities=31%  Similarity=0.567  Sum_probs=21.6

Q ss_pred             cccccccccccCChHHHHHHHHhhcc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~  231 (319)
                      +|+||.|+-...++++|..|++..|+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            57888898888888899888887664

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.14  E-value=0.00017  Score=32.41  Aligned_cols=24  Identities=29%  Similarity=0.625  Sum_probs=18.1

Q ss_pred             cccccccccccCChHHHHHHHHhh
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMM  229 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~  229 (319)
                      ||+|.-|...|..+.+|+.|+-..
T Consensus         2 pykcsscsqqfmqkkdlqshmikl   25 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKL   25 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhc
Confidence            677888888888888888887543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00014  Score=37.83  Aligned_cols=27  Identities=30%  Similarity=0.594  Sum_probs=24.2

Q ss_pred             cCCCccccccchhhccCHHHHHHHHHh
Q psy7463          38 HKGQLYECDCCTEYFIDRIAYEEHVRL   64 (319)
Q Consensus        38 ~~~~~~~C~~C~~~f~~~~~l~~H~~~   64 (319)
                      +|-+||.|.+|++.|..+..+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            467999999999999999999999753

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.06  E-value=0.00013  Score=37.81  Aligned_cols=25  Identities=28%  Similarity=0.761  Sum_probs=14.0

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcC
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~  203 (319)
                      .|.|.+|++.|.+-..|-.|++.|.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             ccCCCCCCCccCCcccccchHhhhc
Confidence            4555555555555555555555554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.02  E-value=0.0002  Score=33.56  Aligned_cols=25  Identities=32%  Similarity=0.914  Sum_probs=11.7

Q ss_pred             CccCchhhccCCHHHHHHHHHhcCC
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h~~  204 (319)
                      |.|..|...|..+-.|+.||-.|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            4444444444444444444444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.90  E-value=0.00023  Score=33.52  Aligned_cols=28  Identities=21%  Similarity=0.438  Sum_probs=20.2

Q ss_pred             ccccccc--chhccccHHHHHHHHHHhcCC
Q psy7463          13 VPQKCPL--CERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        13 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +||.|.+  |.+.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4677744  777788777788887777764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.0001  Score=35.64  Aligned_cols=27  Identities=15%  Similarity=0.468  Sum_probs=20.6

Q ss_pred             ccccccc--chhccccHHHHHHHH-HHhcC
Q psy7463          13 VPQKCPL--CERLYKSVYRMKEHM-KKQHK   39 (319)
Q Consensus        13 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~   39 (319)
                      +||.|++  |.|.|++.++-..|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5788877  888888888888886 66653

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00039  Score=32.78  Aligned_cols=27  Identities=37%  Similarity=0.525  Sum_probs=17.6

Q ss_pred             cccccccchhccccHHHHHHHHHHhcC
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQHK   39 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   39 (319)
                      +||+|..|..-.+..++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            366777777666667777777665544

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00011  Score=35.54  Aligned_cols=21  Identities=38%  Similarity=0.735  Sum_probs=10.3

Q ss_pred             CCccCc--hhhccCCHHHHHHHH
Q psy7463         179 AYQCNV--CDKKYSRLSDYKIHM  199 (319)
Q Consensus       179 ~~~C~~--C~~~f~~~~~l~~H~  199 (319)
                      ||.|++  |.++|++.+....|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444444  555555544444443

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.83  E-value=0.00035  Score=33.74  Aligned_cols=27  Identities=33%  Similarity=0.680  Sum_probs=18.6

Q ss_pred             ccccCCCccccCChhHHHHHHhHhcCC
Q psy7463         122 KLQCNLCADTFCPRSNMLRHYLLKHRG  148 (319)
Q Consensus       122 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  148 (319)
                      ||.|.+|++.|..+.-|.+|....|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            466777777777777777777666655

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00047  Score=35.39  Aligned_cols=27  Identities=22%  Similarity=0.439  Sum_probs=19.1

Q ss_pred             cccccc--ccchhccccHHHHHHHHHHhc
Q psy7463          12 VVPQKC--PLCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        12 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~   38 (319)
                      ++||.|  +-|+..|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            677777  447777777777777776663

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.49  E-value=0.001  Score=29.84  Aligned_cols=23  Identities=17%  Similarity=0.625  Sum_probs=14.4

Q ss_pred             ccccCCCccccCChhHHHHHHhH
Q psy7463         122 KLQCNLCADTFCPRSNMLRHYLL  144 (319)
Q Consensus       122 ~~~C~~C~~~f~~~~~l~~H~~~  144 (319)
                      ||+|..|...|..+.+|..|+..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            46666666666666666666543

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.32  E-value=0.0014  Score=30.17  Aligned_cols=22  Identities=36%  Similarity=0.664  Sum_probs=16.7

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy7463         206 KYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      ||+|..||+.+.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5778888888878888877754

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.00098  Score=30.90  Aligned_cols=23  Identities=26%  Similarity=0.566  Sum_probs=12.4

Q ss_pred             CccCchhhccCCHHHHHHHHHhc
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~h  202 (319)
                      -+|+.|.++.+++..|+.|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            34555555555555555555554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.21  E-value=0.0019  Score=29.65  Aligned_cols=23  Identities=26%  Similarity=0.511  Sum_probs=18.6

Q ss_pred             CCccCchhhccCCHHHHHHHHHh
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNM  201 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~  201 (319)
                      ||.|..||+.|..+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            67888888888888888888654

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.17  E-value=0.0019  Score=30.84  Aligned_cols=28  Identities=18%  Similarity=0.465  Sum_probs=24.3

Q ss_pred             ccccc--ccchhccccHHHHHHHHHHhcCC
Q psy7463          13 VPQKC--PLCERLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        13 ~~~~C--~~C~~~f~~~~~l~~H~~~h~~~   40 (319)
                      +.|.|  +.|+..|+....|+.|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            56888  45999999999999999999885

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.08  E-value=0.00074  Score=31.73  Aligned_cols=14  Identities=36%  Similarity=0.494  Sum_probs=5.6

Q ss_pred             cccccCChHHHHHH
Q psy7463         212 CLKCTSRKNYLKRH  225 (319)
Q Consensus       212 C~~~f~~~~~L~~H  225 (319)
                      |.+.|.+...|.+|
T Consensus        10 c~kgf~tlhhltrh   23 (30)
T d1tf3a2          10 CEKGFTSLHHLTRH   23 (30)
T ss_dssp             CCCEESSTTHHHHH
T ss_pred             ccccchhhhhhhhh
Confidence            33444443333333

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0017  Score=33.23  Aligned_cols=28  Identities=21%  Similarity=0.431  Sum_probs=24.6

Q ss_pred             CCCcccc--ccchhhccCHHHHHHHHHhcc
Q psy7463          39 KGQLYEC--DCCTEYFIDRIAYEEHVRLHE   66 (319)
Q Consensus        39 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~   66 (319)
                      .++||.|  +-|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4799999  559999999999999988774

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0018  Score=34.85  Aligned_cols=25  Identities=20%  Similarity=0.553  Sum_probs=14.6

Q ss_pred             CCccCchhhccCCHHHHHHHHHhcC
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~~~h~  203 (319)
                      .|.|..|||.|.....|+.|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            3556666666666666666655553

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.67  E-value=0.0045  Score=27.78  Aligned_cols=24  Identities=29%  Similarity=0.646  Sum_probs=15.3

Q ss_pred             cccCCCccccCChhHHHHHHhHhc
Q psy7463         123 LQCNLCADTFCPRSNMLRHYLLKH  146 (319)
Q Consensus       123 ~~C~~C~~~f~~~~~l~~H~~~~H  146 (319)
                      |.|+.|-+.|+.+.++..|....|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            556666666666666666665444

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.48  E-value=0.0059  Score=28.12  Aligned_cols=25  Identities=28%  Similarity=0.646  Sum_probs=20.0

Q ss_pred             ccccccchhccccHHHHHHHHHHhc
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~   38 (319)
                      .|.|+.|+-....+++|+.|++.-+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            4788888888888888888887543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0047  Score=28.56  Aligned_cols=24  Identities=29%  Similarity=0.419  Sum_probs=21.7

Q ss_pred             cccccccccccCChHHHHHHHHhhc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMH  230 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H  230 (319)
                      |-+|+.|.+..+++..|+.|.+ +|
T Consensus         2 pekc~ecsyscsskaalrvh~r-ih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHER-IH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHG-GG
T ss_pred             CccCcccccccCcHHHHHHhhc-cc
Confidence            5689999999999999999988 66

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.0054  Score=32.98  Aligned_cols=25  Identities=28%  Similarity=0.482  Sum_probs=22.1

Q ss_pred             cccccccccccCChHHHHHHHHhhcc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~  231 (319)
                      -|.|..|++.|+....|+.|.. .|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEA-QHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEA-QHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHH-HHT
T ss_pred             eeeccccccccCCHHHHhHhHH-hcC
Confidence            5899999999999999999987 554

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.0076  Score=29.63  Aligned_cols=22  Identities=23%  Similarity=0.629  Sum_probs=10.3

Q ss_pred             CccCchhhccCCHHHHHHHHHh
Q psy7463         180 YQCNVCDKKYSRLSDYKIHMNM  201 (319)
Q Consensus       180 ~~C~~C~~~f~~~~~l~~H~~~  201 (319)
                      |.|..||+.|..+..+.+|...
T Consensus         5 fvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHH
T ss_pred             eeecccccchhcchHHHHHhhh
Confidence            4444444444444444444433

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.60  E-value=0.012  Score=28.97  Aligned_cols=26  Identities=15%  Similarity=0.334  Sum_probs=20.5

Q ss_pred             ccccccchhccccHHHHHHHHHHhcC
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQHK   39 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~   39 (319)
                      .|.|..|++.|.....+.+|.-...|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47888888888888888888776654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.01  Score=29.66  Aligned_cols=27  Identities=26%  Similarity=0.580  Sum_probs=21.5

Q ss_pred             cccccc--ch---hccccHHHHHHHHHHhcCC
Q psy7463          14 PQKCPL--CE---RLYKSVYRMKEHMKKQHKG   40 (319)
Q Consensus        14 ~~~C~~--C~---~~f~~~~~l~~H~~~h~~~   40 (319)
                      .|.|.+  |.   +.|+....|..||+.|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            366654  64   5699999999999999986

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.46  E-value=0.01  Score=28.85  Aligned_cols=21  Identities=24%  Similarity=0.504  Sum_probs=12.8

Q ss_pred             CCccCchhhccCCHHHHHHHH
Q psy7463         179 AYQCNVCDKKYSRLSDYKIHM  199 (319)
Q Consensus       179 ~~~C~~C~~~f~~~~~l~~H~  199 (319)
                      .|.|.-||-.|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            355666666666666666654

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.42  E-value=0.014  Score=26.65  Aligned_cols=24  Identities=21%  Similarity=0.411  Sum_probs=18.0

Q ss_pred             cccc--cchhccccHHHHHHHHHHhc
Q psy7463          15 QKCP--LCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        15 ~~C~--~C~~~f~~~~~l~~H~~~h~   38 (319)
                      |.|.  -|++.|+....|..|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            5664  38888888888888887765

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.89  E-value=0.013  Score=27.87  Aligned_cols=19  Identities=21%  Similarity=0.560  Sum_probs=8.2

Q ss_pred             hhhccCCHHHHHHHHHhcC
Q psy7463         185 CDKKYSRLSDYKIHMNMHN  203 (319)
Q Consensus       185 C~~~f~~~~~l~~H~~~h~  203 (319)
                      |+..|...+.|..|+-.|+
T Consensus        11 C~A~ynk~wkL~AHLckHT   29 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHT   29 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHH
T ss_pred             cchhhccchhhhHHhhhhc
Confidence            4444444444444444443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.71  E-value=0.022  Score=27.65  Aligned_cols=22  Identities=23%  Similarity=0.386  Sum_probs=19.9

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy7463         206 KYQCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~  227 (319)
                      .|.|+-||-.|++.+.|..|..
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4999999999999999999953

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.69  E-value=0.038  Score=25.74  Aligned_cols=26  Identities=27%  Similarity=0.475  Sum_probs=19.6

Q ss_pred             ccccccchhccccHHHHHHHHHHhcC
Q psy7463          14 PQKCPLCERLYKSVYRMKEHMKKQHK   39 (319)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~   39 (319)
                      .|.|..|++..++...+..|+...+.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            47888888888888888888765543

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.39  E-value=0.048  Score=25.39  Aligned_cols=25  Identities=28%  Similarity=0.529  Sum_probs=18.0

Q ss_pred             ccccccccccCChHHHHHHHHhhcc
Q psy7463         207 YQCHICLKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H~~~~H~  231 (319)
                      |.|..|++...+...++.|+...|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            6777777777777777777765553

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.90  E-value=0.03  Score=25.86  Aligned_cols=18  Identities=28%  Similarity=0.604  Sum_probs=9.2

Q ss_pred             hhhccCCHHHHHHHHHhc
Q psy7463         185 CDKKYSRLSDYKIHMNMH  202 (319)
Q Consensus       185 C~~~f~~~~~l~~H~~~h  202 (319)
                      |++.|...+.++.|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            455555555555555444

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.67  E-value=0.048  Score=29.06  Aligned_cols=26  Identities=27%  Similarity=0.570  Sum_probs=18.6

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy7463         205 FKYQCHICLKCTSRKNYLKRHIIMMH  230 (319)
Q Consensus       205 ~~~~C~~C~~~f~~~~~L~~H~~~~H  230 (319)
                      .|-.|++|+.......+|.+|+...|
T Consensus        23 qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            36677777777777777777776555

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.55  E-value=0.014  Score=34.16  Aligned_cols=15  Identities=27%  Similarity=0.798  Sum_probs=7.2

Q ss_pred             ccccccccchhcccc
Q psy7463          12 VVPQKCPLCERLYKS   26 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~   26 (319)
                      ...|.|+.|++.|..
T Consensus        12 ~~~y~Cp~C~~~ys~   26 (62)
T d1vd4a_          12 RASFKCPVCSSTFTD   26 (62)
T ss_dssp             SSEEECSSSCCEEEH
T ss_pred             CCceECCCCCCCcch
Confidence            334555555555443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.28  E-value=0.026  Score=28.11  Aligned_cols=18  Identities=22%  Similarity=0.438  Sum_probs=9.4

Q ss_pred             hccCCHHHHHHHHHhcCC
Q psy7463         187 KKYSRLSDYKIHMNMHNG  204 (319)
Q Consensus       187 ~~f~~~~~l~~H~~~h~~  204 (319)
                      +.|.....|..|+|+|+|
T Consensus        15 ~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHC
T ss_pred             CcchhHHHHHHHHhhcCC
Confidence            345555555555555544

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.20  E-value=0.04  Score=25.45  Aligned_cols=23  Identities=35%  Similarity=0.703  Sum_probs=15.4

Q ss_pred             cccc--cccccCChHHHHHHHHHhc
Q psy7463         154 ACDR--CDKRFSLLQNLKRHLAIHE  176 (319)
Q Consensus       154 ~C~~--C~~~f~~~~~L~~H~~~h~  176 (319)
                      .|+.  |++.|...+.++.|+.+|.
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            3543  7777777777777776653

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.06  E-value=0.025  Score=25.71  Aligned_cols=15  Identities=40%  Similarity=0.629  Sum_probs=6.0

Q ss_pred             cccccCChHHHHHHH
Q psy7463         158 CDKRFSLLQNLKRHL  172 (319)
Q Consensus       158 C~~~f~~~~~L~~H~  172 (319)
                      |++.|.....|+.|+
T Consensus         9 c~kafkkhnqlkvhq   23 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQ   23 (28)
T ss_dssp             CCCEESSHHHHHHHH
T ss_pred             chHHHhhccceEEEe
Confidence            344444444444333

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.59  E-value=0.045  Score=31.94  Aligned_cols=40  Identities=23%  Similarity=0.504  Sum_probs=30.6

Q ss_pred             CCCccccccchhhccCHHHHHHHHHhccCCccccccchhhh
Q psy7463          39 KGQLYECDCCTEYFIDRIAYEEHVRLHEGGIICRLCGEKFE   79 (319)
Q Consensus        39 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~   79 (319)
                      ....|.|+.|++.|.....++- +..-.+.|.|..|+....
T Consensus        11 ~~~~y~Cp~C~~~ys~Lda~~L-~d~~~~~F~C~~C~~el~   50 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTDLEANQL-FDPMTGTFRCTFCHTEVE   50 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHHH-EETTTTEEBCSSSCCBCE
T ss_pred             cCCceECCCCCCCcchhhHHHh-cCcCCCeEEecCCCCEEe
Confidence            3466999999999987776655 444567799999987653

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.94  E-value=0.14  Score=27.23  Aligned_cols=27  Identities=22%  Similarity=0.704  Sum_probs=18.2

Q ss_pred             ccccccccchhccccHHHHHHHHHHhc
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~   38 (319)
                      +.|-.|++|+.......+|++|+..-+
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            556677777777777777777765443

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.90  E-value=0.12  Score=23.88  Aligned_cols=19  Identities=32%  Similarity=0.565  Sum_probs=13.6

Q ss_pred             cccccCChHHHHHHHHhhc
Q psy7463         212 CLKCTSRKNYLKRHIIMMH  230 (319)
Q Consensus       212 C~~~f~~~~~L~~H~~~~H  230 (319)
                      |++.|+++..|..|.+-.|
T Consensus         8 c~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TCCEESSHHHHHHHHHHGG
T ss_pred             chhhhccHHHHHhHHHHHH
Confidence            7777777777777766544

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.37  E-value=0.13  Score=25.26  Aligned_cols=26  Identities=23%  Similarity=0.650  Sum_probs=21.4

Q ss_pred             cccccccccccCChHHHHHHHHhhcc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~  231 (319)
                      .|.|.+|.+.++..+++-+|....|.
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             EEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            48888888888888888888876664

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.06  E-value=0.13  Score=23.81  Aligned_cols=25  Identities=24%  Similarity=0.511  Sum_probs=19.8

Q ss_pred             ccccc--cccccCChHHHHHHHHhhcc
Q psy7463         207 YQCHI--CLKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       207 ~~C~~--C~~~f~~~~~L~~H~~~~H~  231 (319)
                      |.|.-  |+.+|+++.+++.|....|.
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhcc
Confidence            56655  99999999999999876663

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.43  E-value=0.049  Score=32.38  Aligned_cols=20  Identities=25%  Similarity=0.489  Sum_probs=11.7

Q ss_pred             cccccccccCChHHHHHHHH
Q psy7463         208 QCHICLKCTSRKNYLKRHII  227 (319)
Q Consensus       208 ~C~~C~~~f~~~~~L~~H~~  227 (319)
                      -|..|++.|.+...|..|++
T Consensus        17 YCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          17 RCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             EETTTTEECSSHHHHHHHTT
T ss_pred             ecccccCccCCHHHHHHHHc
Confidence            45556666666666666654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.90  E-value=0.15  Score=25.01  Aligned_cols=25  Identities=20%  Similarity=0.571  Sum_probs=14.5

Q ss_pred             cccccccchhccccHHHHHHHHHHh
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQ   37 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h   37 (319)
                      ..|.|..|.+.|...+++-+|..+-
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyvtS   31 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYVTS   31 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cEEEeehhhHHHHHHHHHHHHHHhh
Confidence            3456666666666666666665443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.89  E-value=0.043  Score=32.64  Aligned_cols=23  Identities=22%  Similarity=0.574  Sum_probs=13.2

Q ss_pred             cccccccchhccccHHHHHHHHH
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMK   35 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~   35 (319)
                      ..|-|..|++.|.+...|..|++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTT
T ss_pred             CEEecccccCccCCHHHHHHHHc
Confidence            34556666666666666665544

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.01  E-value=0.16  Score=26.07  Aligned_cols=26  Identities=19%  Similarity=0.381  Sum_probs=18.5

Q ss_pred             ccccccccchhccccHHHHHHHHHHhcCCCccccccchh
Q psy7463          12 VVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTE   50 (319)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   50 (319)
                      .+.|.|..||..+.             ++.|-.|++|+.
T Consensus         3 ~~~~~C~vCG~i~~-------------g~~P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYICPICGYTAV-------------DEAPEYCPVCGA   28 (37)
T ss_dssp             SCEEECTTTCCEEE-------------SCCCSBCTTTCC
T ss_pred             CcEEECCCCCCEec-------------CCCCCcCCCCCC
Confidence            45688888887653             466778888864

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.01  E-value=0.37  Score=23.81  Aligned_cols=27  Identities=22%  Similarity=0.473  Sum_probs=22.9

Q ss_pred             cccccccccccCChHHHHHHHHhhccc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHTK  232 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  232 (319)
                      +..|-.|-++|.+..++++|...+|..
T Consensus         3 kltclecmrtfkssfsiwrhqvevhnq   29 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHNQ   29 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheeccc
Confidence            467889999999999999998877754

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=83.63  E-value=0.23  Score=25.27  Aligned_cols=27  Identities=22%  Similarity=0.552  Sum_probs=18.9

Q ss_pred             CccccccccchhccccHHHHHHHHHHhcCCCccccccchh
Q psy7463          11 KVVPQKCPLCERLYKSVYRMKEHMKKQHKGQLYECDCCTE   50 (319)
Q Consensus        11 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   50 (319)
                      .++-|.|..||....             ++.|-+|++|+.
T Consensus         2 ~~~~~vC~vCGyi~~-------------g~~Pe~CPvCg~   28 (36)
T d1yuza2           2 DDKFHLCPICGYIHK-------------GEDFEKCPICFR   28 (36)
T ss_dssp             SCCEEECSSSCCEEE-------------SSCCSBCTTTCC
T ss_pred             CCCEEECCCCCCEee-------------CCCCCcCCCCCC
Confidence            345688888886653             456778888864

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.32  E-value=0.59  Score=26.75  Aligned_cols=26  Identities=15%  Similarity=0.446  Sum_probs=15.9

Q ss_pred             cccccccchhccccHHHHHHHHHHhc
Q psy7463          13 VPQKCPLCERLYKSVYRMKEHMKKQH   38 (319)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~   38 (319)
                      ..|.|..|...|-+...|..|+..|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            34666666666666666666666554

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.26  E-value=1  Score=24.43  Aligned_cols=29  Identities=21%  Similarity=0.348  Sum_probs=24.9

Q ss_pred             cccccc--cccccCChHHHHHHHHhhccccc
Q psy7463         206 KYQCHI--CLKCTSRKNYLKRHIIMMHTKFE  234 (319)
Q Consensus       206 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~  234 (319)
                      ||.|-.  |...|+-..+|..|.+.+|...-
T Consensus        20 pyrcvhqgc~aaftiq~nlilhy~avh~s~l   50 (61)
T d1x3ca1          20 PYRCVHQGCFAAFTIQQNLILHYQAVHKSDL   50 (61)
T ss_dssp             SCBCCSTTCCCBCSSHHHHHHHHHHHSSSCC
T ss_pred             ceeeeccchhhhhhhhhhHHHHHHHHhhhcC
Confidence            688877  99999999999999998886543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.08  E-value=0.3  Score=27.98  Aligned_cols=25  Identities=28%  Similarity=0.534  Sum_probs=21.9

Q ss_pred             cccccccccccCChHHHHHHHHhhcc
Q psy7463         206 KYQCHICLKCTSRKNYLKRHIIMMHT  231 (319)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~~H~  231 (319)
                      -|+|..|+..|.+...|..|+. .|.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~-~hn   42 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLN-IHN   42 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-HHH
T ss_pred             eeeechhHHHHhhHHHHHHHHH-hcc
Confidence            4999999999999999999988 553

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.81  E-value=0.6  Score=23.00  Aligned_cols=28  Identities=32%  Similarity=0.525  Sum_probs=21.6

Q ss_pred             ccccCCCccccCChhHHHHHHhHhcCCC
Q psy7463         122 KLQCNLCADTFCPRSNMLRHYLLKHRGD  149 (319)
Q Consensus       122 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  149 (319)
                      +..|-.|-++|.+.-++.+|+..+|...
T Consensus         3 kltclecmrtfkssfsiwrhqvevhnqn   30 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHNQN   30 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCCC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheecccc
Confidence            3668888888888888888887777654