Psyllid ID: psy7539
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 318 | 2.2.26 [Sep-21-2011] | |||||||
| Q7ZXF5 | 515 | Fatty acyl-CoA reductase | N/A | N/A | 0.924 | 0.570 | 0.419 | 3e-61 | |
| Q922J9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.921 | 0.568 | 0.408 | 6e-60 | |
| Q5ZM72 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.921 | 0.568 | 0.414 | 1e-59 | |
| Q5R834 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.921 | 0.568 | 0.404 | 4e-59 | |
| Q66H50 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.921 | 0.568 | 0.401 | 4e-59 | |
| Q8WVX9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.921 | 0.568 | 0.401 | 9e-59 | |
| A1ZAI5 | 625 | Putative fatty acyl-CoA r | no | N/A | 0.962 | 0.489 | 0.364 | 6e-58 | |
| Q960W6 | 516 | Putative fatty acyl-CoA r | no | N/A | 0.889 | 0.548 | 0.388 | 3e-55 | |
| Q7TNT2 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.833 | 0.514 | 0.402 | 1e-51 | |
| Q0P5J1 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.833 | 0.514 | 0.394 | 1e-51 |
| >sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 182/298 (61%), Gaps = 4/298 (1%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C N K +Y+L+R K + RER+ E+ L++ L+ EQ + A +KVI
Sbjct: 24 KVLLEKLLRSCPNTKAVYVLVRHKAGQKPRERVAEMMSCKLFDKLRDEQPDCA--QKVIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I+ ++ P+L +S ED+ L + I IV+H AATVRF++ ++ + LN TR +L L+++
Sbjct: 82 ISSELTQPELDMSKEDQDTLIDCIDIVFHCAATVRFNESLRDAMQLNVIATRQLLYLAQK 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M L++F++VSTAY + K +EE YPPPV P +IE E + + + + +L+ D P
Sbjct: 142 MKKLEVFIHVSTAYANCNRKQIEEVVYPPPVDPKKLIESLEWMDDSLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + + + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYTYTKALAEYVVQQ-EGSKLNIAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RTM + AD +PVDV+VN L + W N M V N T W ++
Sbjct: 261 ILRTMRASNNAVADLIPVDVVVNTTLAAAWYSGVNRPKNMLVYNCTTGGTNPFHWGEV 318
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Xenopus laevis (taxid: 8355) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2 |
| >sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 231 bits (589), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 187/299 (62%), Gaps = 6/299 (2%)
Query: 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C V +Y+L+R K + +ER+EEI S L++ L+ E + EK+I
Sbjct: 24 KVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSKLFDRLRDENPD--FREKIIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
IN ++ P L +S ED++++ ++ ++++H AATVRF++ ++ V LN TR ++ L++Q
Sbjct: 82 INSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M +L++F++VSTAY + K ++E YPPPV P +I+ E + + + +L+ D P
Sbjct: 142 MKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYIYTKALAEYVVQQ-EGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RTM + AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIM-VYNCTTGSTNPFHWGEV 318
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 229 bits (585), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 186/299 (62%), Gaps = 6/299 (2%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C VK +Y+L+RPK + R+EEI L++ L++EQ + EK+I
Sbjct: 24 KVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEITSCKLFDRLREEQPDFK--EKIIV 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I ++ P+L +S ++ L E I+I++H AATVRF++ ++ V LN T+ +L+L++Q
Sbjct: 82 ITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLRDAVQLNVLSTKQLLSLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M +L++F++VSTAY + K +EE YPPPV P +++ E + + + + +L+ D P
Sbjct: 142 MTNLEVFMHVSTAYAYCNRKHIEEVVYPPPVDPKKLMDSLEWMDDSLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYTYTKALAEYVVQQ-EGARLNTAIIRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RTM AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTMRASNGAVADLVPVDVVVNMTLAAAWYSGVNRPRNIM-VYNCTTGGTNPFHWSEV 318
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 186/299 (62%), Gaps = 6/299 (2%)
Query: 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C V +Y+L+R K + +ER+EE+ L++ L+ E + EK+I
Sbjct: 24 KVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPD--FREKIIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
IN ++ P L +S ED++++ E+ +I++H AATVRF++ ++ V LN TR ++ L++Q
Sbjct: 82 INSELTQPKLALSEEDKEVIIESTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M +L++F++VSTAY + K ++E YPPPV P +I+ E + + + +L+ D P
Sbjct: 142 MKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYIYTKALAEYVVQQ-EGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RT+ + AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTIRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNIM-VYNCTTGSTNPFHWGEV 318
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (581), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 186/299 (62%), Gaps = 6/299 (2%)
Query: 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C V +Y+L+R K + +ER+EEI L++ L+ E + +K+I
Sbjct: 24 KVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLFDRLRDENPD--FRQKIIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
IN ++ P L +S ED++++ ++ ++++H AATVRF++ ++ V LN TR ++ L++Q
Sbjct: 82 INSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M +L++F++VSTAY + K ++E YPPPV P +I+ E + + + +L+ D P
Sbjct: 142 MKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYIYTKALAEYVVQQ-EGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RTM + AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIM-VYNCTTGSTNPFHWGEV 318
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 227 bits (578), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 186/299 (62%), Gaps = 6/299 (2%)
Query: 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C V +Y+L+R K + +ER+EE+ L++ L+ E + EK+I
Sbjct: 24 KVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPD--FREKIIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
IN ++ P L +S ED++++ ++ +I++H AATVRF++ ++ V LN TR ++ L++Q
Sbjct: 82 INSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M +L++F++VSTAY + K ++E YPPPV P +I+ E + + + +L+ D P
Sbjct: 142 MKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYIYTKALAEYVVQQ-EGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RT+ + AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTIRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNIM-VYNCTTGSTNPFHWGEV 318
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 224 bits (572), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 188/313 (60%), Gaps = 7/313 (2%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVL+EK+LR+C ++ IY+L+RPK+ + RL E+ +PL+E+L++E+ + KVIP
Sbjct: 139 KVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLFESLRQEKPKE--LSKVIP 196
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I+GD+ +LGIS +D+ +L + +V+H AATV+FD+ ++ V +N GT+ ++ L +
Sbjct: 197 ISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLGTKRLVELCHR 256
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M+ L ++VSTAYC+ + E Y PP +P ++I L ++ L+ L L+ P
Sbjct: 257 MLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDILDQLTPRLIGKRP 316
Query: 180 NGYAYTKCLCEGVVTEYMEAG-MPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGK 238
N Y +TK L E ++ + EAG +P I+RPSI+ +P GW DN NGPTGL+ K
Sbjct: 317 NTYTFTKALAEHMLLK--EAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAK 374
Query: 239 GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDII 298
G+ RTM C+ + AD +PVD+++N ++ + W + N + + N + I W + +
Sbjct: 375 GMFRTMMCEKNYVADMVPVDIVINLMIAAAWRTATRKSNNLLIYNCCTGQRNPIIWSEFV 434
Query: 299 ENGKDIARNKVPL 311
++ R K PL
Sbjct: 435 KHAMTSVR-KHPL 446
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q960W6|FACR3_DROME Putative fatty acyl-CoA reductase CG8306 OS=Drosophila melanogaster GN=CG8306 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 216 bits (549), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 184/291 (63%), Gaps = 8/291 (2%)
Query: 3 LLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN 61
++EK+LR NV +Y+L+R KK K+ +ERLEE+ ++ +++ K+ Q +S + K++PI
Sbjct: 28 IVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNSVFDKFKELQLQSRL-SKIVPIE 86
Query: 62 GDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMI 121
GDV + LGIS +DRQ L + +++V+H AAT+ F ++ +N RGTR ++ L +Q+
Sbjct: 87 GDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLKETTNINLRGTRRVVELCQQIK 146
Query: 122 HLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNG 181
+L V+VS+AY + +EEK YP P P +I+ +E L+ + L+ L+ +LL+D PN
Sbjct: 147 NLDALVHVSSAYVNAYLTKVEEKLYPAPEDPEKIIQLSETLNDDALKELEPKLLKDHPNT 206
Query: 182 YAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGII 241
Y +TK L E V + + PC I+RPS+I WK+P+PGWT + NGP G +GA KG++
Sbjct: 207 YTFTKHLAEHEVAN-VASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFFMGASKGVL 265
Query: 242 RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQI 292
R + D S D++P+DV+VNG++ + + N+++ N D QI
Sbjct: 266 RRLPLDPSIIMDYIPIDVVVNGIITTGYYV-----NSLQAKNGGRPADLQI 311
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 203 bits (517), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 166/271 (61%), Gaps = 6/271 (2%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVL+EK+ RT ++K IYIL+RPK + +ER+ +I S L+E +K+ + EK+ P
Sbjct: 24 KVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSKLFEKVKEVCPN--VHEKIRP 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I+ D+ D IS ED Q L +I++H AATVRFD +++ V LN T+ +L ++ Q
Sbjct: 82 ISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAHLREAVQLNVTATQQLLLMASQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M L+ F+++STA+ + ++E YP PV P +I+ E L + +E + +L+ D P
Sbjct: 142 MPKLEAFIHISTAFSNCNLSHIDEVIYPCPVEPRKIIDSMEWLDDSIIEEITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAG-MPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGK 238
N Y YTK L E VV + E+G + I+RPSI+ W++P PGW DN+NGP+GL+I GK
Sbjct: 202 NTYTYTKALGEIVVQQ--ESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLIIATGK 259
Query: 239 GIIRTMYCDYSTCADFLPVDVLVNGVLLSTW 269
G +R++ AD +PVD +VN + W
Sbjct: 260 GFLRSIKATPMAVADVIPVDTVVNLTIAVGW 290
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 203 bits (517), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 167/271 (61%), Gaps = 6/271 (2%)
Query: 1 KVLLEKILRTCENVKI-YILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVL+EK+ RT ++K+ YIL+RPK+ + ++R+ +I S L+E +K+ + EK+
Sbjct: 24 KVLMEKLFRTSPDLKVVYILVRPKQGQTLQQRVFQILDSKLFEKVKEVCPN--VHEKIRA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I+ D+ D IS ED + L +I++H AATVRFDD+++ V LN T+ +L ++ Q
Sbjct: 82 ISADLNQNDFAISKEDMKELLSHTNIIFHCAATVRFDDHLRHAVQLNVTATQQLLLMASQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M L+ F+++STA+ + K ++E YP PV P +I+ E L ++ + +L+ D+P
Sbjct: 142 MPKLEAFIHISTAFSNCNLKHIDEVVYPCPVEPKKIIDSMEWLDDAIIDEITPKLIGDWP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAG-MPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGK 238
N Y YTK L E VV + E G + I+RPSI+ W++P PGW DN+NGP+GL+I AGK
Sbjct: 202 NTYTYTKALGEVVVQQ--EGGNLNIAIIRPSIMGATWQEPFPGWVDNLNGPSGLIIAAGK 259
Query: 239 GIIRTMYCDYSTCADFLPVDVLVNGVLLSTW 269
G +R++ AD +P D +VN L W
Sbjct: 260 GFLRSIRATPMAVADLIPADTVVNLTLAVGW 290
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 318 | ||||||
| 328706792 | 559 | PREDICTED: putative fatty acyl-CoA reduc | 0.987 | 0.561 | 0.541 | 2e-99 | |
| 350423751 | 517 | PREDICTED: putative fatty acyl-CoA reduc | 0.984 | 0.605 | 0.541 | 7e-98 | |
| 340722988 | 517 | PREDICTED: putative fatty acyl-CoA reduc | 0.984 | 0.605 | 0.541 | 4e-97 | |
| 307211548 | 517 | Fatty acyl-CoA reductase 1 [Harpegnathos | 0.977 | 0.601 | 0.541 | 5e-96 | |
| 66547347 | 516 | PREDICTED: putative fatty acyl-CoA reduc | 0.977 | 0.602 | 0.535 | 5e-95 | |
| 298402913 | 525 | fatty-acyl CoA reductase 3 [Ostrinia nub | 0.990 | 0.6 | 0.515 | 2e-94 | |
| 195155091 | 517 | GL17707 [Drosophila persimilis] gi|19411 | 0.981 | 0.603 | 0.530 | 2e-94 | |
| 198459033 | 517 | GA12961 [Drosophila pseudoobscura pseudo | 0.981 | 0.603 | 0.530 | 3e-94 | |
| 298569765 | 516 | putative fatty acyl-CoA reductase [Apis | 0.977 | 0.602 | 0.531 | 3e-94 | |
| 332021355 | 544 | Putative fatty acyl-CoA reductase [Acrom | 0.974 | 0.569 | 0.535 | 3e-94 |
| >gi|328706792|ref|XP_001949683.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 171/316 (54%), Positives = 239/316 (75%), Gaps = 2/316 (0%)
Query: 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVL+EK+LR C ++ +IY+LLR KK N ++R+E IF S L++ LK E + KV P
Sbjct: 55 KVLIEKLLRKCPDIERIYLLLRTKKGSNPKQRVETIFSSVLFDYLK-ELRGVEVLNKVYP 113
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I GDV+ P+L I+ DR++L++T+ IVYH AAT+RFD+ ++ V LNTRGT+ +L L+K+
Sbjct: 114 IAGDVSEPNLAINESDRRLLADTVQIVYHAAATIRFDEALKKAVLLNTRGTKMVLELAKE 173
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M +LQ+FVYVST+YCH +EKVL EK YPPP PH +I+ E+L + +E + +E+L FP
Sbjct: 174 MKNLQVFVYVSTSYCHLEEKVLFEKAYPPPADPHKIIQSMEMLDEPFVETISKEILGSFP 233
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N YA+TKCL E +V E +EAG+PC+I RPSI+IPIWK+PLPGWTDNINGPTGLLIGAGKG
Sbjct: 234 NSYAFTKCLSEHLVVEQIEAGLPCIIARPSIVIPIWKEPLPGWTDNINGPTGLLIGAGKG 293
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 299
+IRTM+C AD+LPVD+ VNG++L TWN++ N T + +LT+++++++TW +II+
Sbjct: 294 VIRTMFCHNQGYADYLPVDITVNGIILFTWNYIGNNDTTRTICHLTSSQEWRVTWQEIID 353
Query: 300 NGKDIARNKVPLNNPI 315
GK I +VPLN +
Sbjct: 354 IGKSIVTTEVPLNGAV 369
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350423751|ref|XP_003493580.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 363 bits (931), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 171/316 (54%), Positives = 237/316 (75%), Gaps = 3/316 (0%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KV++EK+LR +N K IY+L+R KK K+ + RLEEIF SPL+E +K+++ + + V
Sbjct: 33 KVVIEKLLRCVQNTKQIYMLIRTKKEKDPKHRLEEIFNSPLFEKVKRQRGAEVLKKSVTV 92
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
++GDV++P LGIS+EDR+ML E I+IVYH AATVRFD+ ++ V LNTRGT+ ML L+K+
Sbjct: 93 VSGDVSLPGLGISSEDRKMLCEKINIVYHAAATVRFDELLKKAVLLNTRGTKQMLELAKE 152
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M HL+LF ++STAYCH +EK+L EK YPPP PH +I+ E + + +E + ++L P
Sbjct: 153 MKHLKLFAHISTAYCHLEEKILREKPYPPPADPHKIIKCVEWMDDDVVEAMTDKILGHLP 212
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N YA+TK L EG+V E M +P +ILRPSI+IPIWK+P+PGWTDNINGPTGLLIGAGKG
Sbjct: 213 NTYAFTKALSEGLVEEAM-PHIPAIILRPSIVIPIWKEPVPGWTDNINGPTGLLIGAGKG 271
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 299
+IRTMYC+ S+ AD+LPVD+ VN +L S+WNF+ + RV NLT++ +F+++W +II
Sbjct: 272 VIRTMYCNDSSYADYLPVDIAVNAILASSWNFIYCKDHEKRVYNLTSSSEFKVSWAEIIA 331
Query: 300 NGKDIARNKVPLNNPI 315
G+ I KVPLN +
Sbjct: 332 RGRKIT-EKVPLNGVV 346
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340722988|ref|XP_003399881.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 171/316 (54%), Positives = 236/316 (74%), Gaps = 3/316 (0%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KV++EK+LR +N K IY+L+R KK K+ + RLEEIF SPL+E +K+++ + + V
Sbjct: 33 KVVIEKLLRCVQNTKQIYMLIRTKKEKDPKHRLEEIFNSPLFEKVKRQRGAEILKKSVTV 92
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I+GDV++P LGIS+EDR+ML E I+IVYH AATVRFD+ ++ V LNTRGT+ ML L+K+
Sbjct: 93 ISGDVSLPGLGISSEDRKMLCEKINIVYHAAATVRFDELLKKAVLLNTRGTKQMLELAKE 152
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M HL+LF ++STAYCH +EK+L EK YPPP PH +I+ E + + +E + ++L P
Sbjct: 153 MKHLKLFAHISTAYCHLEEKILREKPYPPPADPHKIIKCVEWMDDDVVEAMTDKILGHLP 212
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N YA+TK L E +V E M +P +ILRPSI+IPIWK+P+PGWTDNINGPTGLLIGAGKG
Sbjct: 213 NTYAFTKALSESLVEEAM-PHIPAIILRPSIVIPIWKEPVPGWTDNINGPTGLLIGAGKG 271
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 299
+IRTMYC+ S+ AD+LPVD+ VN +L S+WNF+ + RV NLT++ +F+++W +II
Sbjct: 272 VIRTMYCNDSSYADYLPVDIAVNAILASSWNFIYCKDHEKRVYNLTSSSEFKVSWAEIIA 331
Query: 300 NGKDIARNKVPLNNPI 315
G+ I KVPLN +
Sbjct: 332 RGRRIT-EKVPLNGVV 346
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307211548|gb|EFN87626.1| Fatty acyl-CoA reductase 1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 357 bits (915), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 170/314 (54%), Positives = 238/314 (75%), Gaps = 3/314 (0%)
Query: 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KV++EK+LR+ N+ IY+L+RPKK K++++R+EEIF SPL+E +K E+ + + E V
Sbjct: 34 KVMIEKLLRSLPNIAHIYMLVRPKKGKDTKQRVEEIFDSPLFERVKAERGIATLREMVTV 93
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
+NGDV +P LGIS ED++ML E ++IVYH AATVRFD+ ++T V +NTRGT+ M+ L+K+
Sbjct: 94 VNGDVLMPGLGISPEDKKMLCENVNIVYHAAATVRFDEMLKTAVLMNTRGTKMMVELAKE 153
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M +L LFVY+STAYCH +EK+L ++TYPPP +P +VI+ E + + +E + ++L P
Sbjct: 154 MKNLALFVYISTAYCHLEEKILRQRTYPPPANPDSVIKCVEWVDEEVIEAMTDKILGSCP 213
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N YA+TK L E ++ + +P +ILRPSIIIPIWK+PLPGWTDNINGPTGLLIGAGKG
Sbjct: 214 NTYAFTKALAENIIEDSF-PHIPSIILRPSIIIPIWKEPLPGWTDNINGPTGLLIGAGKG 272
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 299
+IRTMYCD AD+LPVDV VN +L+++WNFL RV NLT++ +FQI+W +II+
Sbjct: 273 VIRTMYCDDKRYADYLPVDVAVNAILIASWNFLYFKDYEKRVYNLTSSSEFQISWGEIID 332
Query: 300 NGKDIARNKVPLNN 313
G+ I + +VPLN
Sbjct: 333 RGRRITQ-RVPLNG 345
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|66547347|ref|XP_624493.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 168/314 (53%), Positives = 233/314 (74%), Gaps = 3/314 (0%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KV++EK LR ++K IY+L+R K K+ + RLEEIF SPL+E +KK++ + + V
Sbjct: 28 KVIVEKFLRCLPDIKQIYLLIRTKHEKDPKYRLEEIFNSPLFEKVKKQRGAETLKKSVTV 87
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
INGD+ +P L +S EDR+ML E I+IVYH AA+VRFD+ ++ V LNTRGT++ML L+K+
Sbjct: 88 INGDMTLPGLSLSLEDRKMLCEKINIVYHAAASVRFDEMLKKAVLLNTRGTKEMLELAKE 147
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M HL+LF Y+STAYCH +EK+LEEK YPPP+ PH +I+ E + + +E + ++L FP
Sbjct: 148 MKHLKLFAYISTAYCHLEEKILEEKPYPPPIDPHKIIKCVEWMDDDVVEAMTGKILAHFP 207
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N YA+TK L E +V E M +P +ILRPSI+IPIWK+PLPGWTDNINGPTG+LIGAGKG
Sbjct: 208 NTYAFTKALSEALVEEAMPY-IPAIILRPSIVIPIWKEPLPGWTDNINGPTGILIGAGKG 266
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 299
++RTMYC+ S+ ADFLPVD+ VN +L S+WNF+ + RV +LT++ +F++ W +II
Sbjct: 267 VLRTMYCNGSSYADFLPVDIAVNAILASSWNFIYCKDHEKRVYHLTSSNEFKVPWEEIIA 326
Query: 300 NGKDIARNKVPLNN 313
G+ I +VPLN
Sbjct: 327 RGRKIT-ERVPLNG 339
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|298402913|gb|ADI82776.1| fatty-acyl CoA reductase 3 [Ostrinia nubilalis] | Back alignment and taxonomy information |
|---|
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 164/318 (51%), Positives = 230/318 (72%), Gaps = 3/318 (0%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSE-SAIFEKVI 58
KVL+EK+LR C ++ IY+L+RPKK K ++RLEE+FQ L+E L+ + I EKV
Sbjct: 38 KVLIEKLLRKCTEIRQIYLLVRPKKGKTPKQRLEELFQGELFEQLRNLRGGVEPILEKVT 97
Query: 59 PINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSK 118
I+GDV+ PDL +S DRQ+L E + I+ H AAT+RFD+ ++ V LN RGT+ ++ L+K
Sbjct: 98 LISGDVSEPDLAMSEADRQLLIENVDIIIHAAATIRFDEELKKAVLLNVRGTKLIVELAK 157
Query: 119 QMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDF 178
L+LF+++STAYCH EK+LEEK YPPP PH +I+ E + + + L +LL
Sbjct: 158 TCKKLKLFIHISTAYCHLHEKLLEEKPYPPPADPHQIIQAMEWMDEETVAQLTPKLLDKL 217
Query: 179 PNGYAYTKCLCEGVVTEYMEAGM-PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAG 237
PN YA+TK L E VV E MEA + P MILRPSI+IPIW++PLPGWTDNINGPTGLLIGAG
Sbjct: 218 PNSYAFTKALGEAVVVEAMEADLIPAMILRPSIVIPIWQEPLPGWTDNINGPTGLLIGAG 277
Query: 238 KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 297
KG+IRTMYC ++ AD+LPVDV +NG+++S WN+++ RV+N T++ + ++TW ++
Sbjct: 278 KGVIRTMYCKSNSYADYLPVDVFINGIMISAWNYITYGDKKSRVVNFTSSAEIKVTWLEM 337
Query: 298 IENGKDIARNKVPLNNPI 315
I+ G++I N+VPLN +
Sbjct: 338 IDAGREIIMNRVPLNGVV 355
|
Source: Ostrinia nubilalis Species: Ostrinia nubilalis Genus: Ostrinia Family: Crambidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195155091|ref|XP_002018440.1| GL17707 [Drosophila persimilis] gi|194114236|gb|EDW36279.1| GL17707 [Drosophila persimilis] | Back alignment and taxonomy information |
|---|
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/315 (53%), Positives = 232/315 (73%), Gaps = 3/315 (0%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVL+EK+LR+C +K IY+L+RPKK K+ +ER+++IFQ+ L++ +K+++ E I ++V+
Sbjct: 48 KVLVEKLLRSCGELKHIYLLIRPKKGKDPQERIKDIFQNVLFDQVKQQRGEERILQQVVA 107
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I GDV +P LGIS +D L E + IVYH AATVRFD+ +++ VF+NTRGT+ ML L+
Sbjct: 108 IAGDVLLPGLGISEQDLATLREEVSIVYHCAATVRFDEPLRSAVFMNTRGTKYMLELAGS 167
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
+ HL+ F Y STAYCH K L EK Y PP PH V++ E LS +E+ +++++L D P
Sbjct: 168 LKHLEFFAYCSTAYCHLHVKTLYEKPYDPPADPHKVMQACEWLSDDEVATIEKKILGDIP 227
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N YAYTK L E +V E + +P +ILRPSI+IPIWK+P+PGWTDNINGPTGLLIGAGKG
Sbjct: 228 NTYAYTKSLAEALVVEKFKE-LPAVILRPSIVIPIWKEPIPGWTDNINGPTGLLIGAGKG 286
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDII 298
+IRTMYC S DFLPVDV VNG+L+++W N + NT RV ++T++ D +++W +II
Sbjct: 287 VIRTMYCKSSGYGDFLPVDVAVNGILVASWRNITAGTDNTNRVAHMTSSNDIKVSWAEII 346
Query: 299 ENGKDIARNKVPLNN 313
E G+ + NKVPLN
Sbjct: 347 ELGRWVIENKVPLNG 361
|
Source: Drosophila persimilis Species: Drosophila persimilis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|198459033|ref|XP_001361236.2| GA12961 [Drosophila pseudoobscura pseudoobscura] gi|198136546|gb|EAL25814.2| GA12961 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 167/315 (53%), Positives = 232/315 (73%), Gaps = 3/315 (0%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVL+EK+LR+C +K IY+L+RPKK K+ +ER+++IFQ+ L++ +K+++ E I ++V+
Sbjct: 48 KVLVEKLLRSCGELKHIYLLIRPKKGKDPQERIKDIFQNVLFDQVKQQRGEERILQQVVA 107
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I GDV +P LGIS +D L E + IVYH AATVRFD+ +++ VF+NTRGT+ ML L+
Sbjct: 108 IAGDVLLPGLGISEQDLATLREEVSIVYHCAATVRFDEPLRSAVFMNTRGTKYMLELAGS 167
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
+ HL+ F Y STAYCH K L EK Y PP PH V++ E LS +E+ +++++L D P
Sbjct: 168 LKHLEFFAYCSTAYCHLHVKTLYEKPYDPPADPHKVMQACEWLSDDEVATIEKKILGDIP 227
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N YAYTK L E +V E + +P +ILRPSI+IPIWK+P+PGWTDNINGPTGLLIGAGKG
Sbjct: 228 NTYAYTKSLAEALVVEKFKE-LPAVILRPSIVIPIWKEPIPGWTDNINGPTGLLIGAGKG 286
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDII 298
+IRTMYC S DFLPVDV VNG+L+++W N + NT RV ++T++ D +++W +II
Sbjct: 287 VIRTMYCKSSGYGDFLPVDVAVNGILVASWRNITAGTDNTNRVAHMTSSNDIKVSWAEII 346
Query: 299 ENGKDIARNKVPLNN 313
E G+ + NKVPLN
Sbjct: 347 ELGRWVIENKVPLNG 361
|
Source: Drosophila pseudoobscura pseudoobscura Species: Drosophila pseudoobscura Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|298569765|gb|ADI87411.1| putative fatty acyl-CoA reductase [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 167/314 (53%), Positives = 232/314 (73%), Gaps = 3/314 (0%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KV++EK LR ++K IY+L+R K K+ + RL EIF SPL+E +KK++ + + V
Sbjct: 28 KVIVEKFLRCLPDIKQIYLLIRTKHEKDPKYRLGEIFNSPLFEKVKKQRGAETLKKSVTV 87
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
INGD+ +P L +S EDR+ML E I+IVYH AA+VRFD+ ++ V LNTRGT++ML L+K+
Sbjct: 88 INGDMTLPGLSLSLEDRKMLCEKINIVYHAAASVRFDEMLKKAVLLNTRGTKEMLELAKE 147
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M HL+LF Y+STAYCH +EK+LEEK YPPP+ PH +I+ E + + +E + ++L FP
Sbjct: 148 MKHLKLFAYISTAYCHLEEKILEEKPYPPPIDPHKIIKCVEWMDDDVVEAMTGKILAHFP 207
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N YA+TK L E +V E M +P +ILRPSI+IPIWK+PLPGWTDNINGPTG+LIGAGKG
Sbjct: 208 NTYAFTKALSEALVEEAMPY-IPAIILRPSIVIPIWKEPLPGWTDNINGPTGILIGAGKG 266
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 299
++RTMYC+ S+ ADFLPVD+ VN +L S+WNF+ + RV +LT++ +F++ W +II
Sbjct: 267 VLRTMYCNGSSYADFLPVDIAVNAILASSWNFIYCKDHEKRVYHLTSSNEFKVPWEEIIA 326
Query: 300 NGKDIARNKVPLNN 313
G+ I +VPLN
Sbjct: 327 RGRKIT-ERVPLNG 339
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332021355|gb|EGI61729.1| Putative fatty acyl-CoA reductase [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 168/314 (53%), Positives = 239/314 (76%), Gaps = 4/314 (1%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVL+EKILR +V+ IY+L+RPKK K+ ++RL+EIF SPL+E ++ ++ SA+ + V
Sbjct: 61 KVLIEKILRCLPDVEHIYMLVRPKKGKDPKQRLDEIFNSPLFEKVRTQRGLSALEKAVTA 120
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
INGDVA+P LG+S EDR++L E ++IVYH AATVRFD+ ++ V LNTRGT+ M+ L+K+
Sbjct: 121 INGDVALPGLGLSPEDRKILIENVNIVYHGAATVRFDELLKRAVLLNTRGTKLMIELAKE 180
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M HL +F+++STAYCH +E++L EKTYPPP PH VI+ E + + +E + ++L P
Sbjct: 181 MKHLLVFLHISTAYCHLEEQILREKTYPPPADPHQVIKCVEWMDDDVVEAMTDKILGKLP 240
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N YA+TK L E +V E M + +P +ILRPS+IIPIWK+P+PGWTDNINGPTGLLIGAGKG
Sbjct: 241 NTYAFTKALSESLVEESM-SHIPAIILRPSVIIPIWKEPIPGWTDNINGPTGLLIGAGKG 299
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 299
+IRTM+C+ + AD+LPVD+ VNG+LL+TWNF+ + V N+T++ + +ITW +II+
Sbjct: 300 VIRTMFCNENGYADYLPVDIAVNGLLLATWNFIYFK-DEKHVFNMTSSAEIKITWAEIIK 358
Query: 300 NGKDIARNKVPLNN 313
G+ I ++PLN
Sbjct: 359 RGRKIT-ERIPLNG 371
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 318 | ||||||
| FB|FBgn0033464 | 517 | CG1441 [Drosophila melanogaste | 0.977 | 0.601 | 0.509 | 3.9e-83 | |
| UNIPROTKB|E2R4R9 | 514 | FAR1 "Uncharacterized protein" | 0.921 | 0.570 | 0.404 | 8.6e-56 | |
| UNIPROTKB|E1C023 | 517 | FAR1 "Fatty acyl-CoA reductase | 0.921 | 0.566 | 0.408 | 1.1e-55 | |
| UNIPROTKB|Q5ZM72 | 515 | FAR1 "Fatty acyl-CoA reductase | 0.921 | 0.568 | 0.408 | 1.1e-55 | |
| MGI|MGI:1914670 | 515 | Far1 "fatty acyl CoA reductase | 0.921 | 0.568 | 0.401 | 1.4e-55 | |
| UNIPROTKB|A5PJQ0 | 515 | FAR1 "Uncharacterized protein" | 0.921 | 0.568 | 0.397 | 2.9e-55 | |
| RGD|1306647 | 515 | Far1 "fatty acyl CoA reductase | 0.921 | 0.568 | 0.394 | 7.8e-55 | |
| UNIPROTKB|Q66H50 | 515 | Far1 "Fatty acyl-CoA reductase | 0.921 | 0.568 | 0.394 | 7.8e-55 | |
| UNIPROTKB|E9PNW8 | 335 | FAR1 "Fatty acyl-CoA reductase | 0.921 | 0.874 | 0.394 | 1.3e-54 | |
| UNIPROTKB|Q8WVX9 | 515 | FAR1 "Fatty acyl-CoA reductase | 0.921 | 0.568 | 0.394 | 1.3e-54 |
| FB|FBgn0033464 CG1441 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 160/314 (50%), Positives = 215/314 (68%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVL+EK+LR+C +K IY+L+RPKK K+ +ER+++IFQ+ L++ +K+ + E I ++V+
Sbjct: 48 KVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIKDIFQNVLFDQVKQMRGEEHILQQVVA 107
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I GDV P LGIS +D + L + + IVYH AATVRFD+ ++ VF+NTRGT+ ML L+
Sbjct: 108 IAGDVLSPGLGISEKDLETLRQEVSIVYHCAATVRFDEPLRNAVFMNTRGTKYMLELALT 167
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIXXXXXXXXXXXXXXXXXXXQDFP 179
+ HL F Y STAYCH K L EK Y PP PH V+ P
Sbjct: 168 LKHLDFFAYCSTAYCHLHVKTLYEKPYDPPADPHKVMQACEWLTDDEVATIERKVLGAIP 227
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N YAYTK L E +V E E +P +ILRPSI+IPIWK+P+PGWTDNINGPTGLLIGAGKG
Sbjct: 228 NTYAYTKSLAEALVVEKFEE-LPAVILRPSIVIPIWKEPIPGWTDNINGPTGLLIGAGKG 286
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDII 298
+IRTMYC+ S DFLPVDV VNG+L+++W N + T RV ++T++ D +++W +II
Sbjct: 287 VIRTMYCNSSGYGDFLPVDVAVNGILVASWRNITAGTDKTNRVAHMTSSNDIKVSWAEII 346
Query: 299 ENGKDIARNKVPLN 312
E G+ + NKVPLN
Sbjct: 347 ELGRWVIENKVPLN 360
|
|
| UNIPROTKB|E2R4R9 FAR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 121/299 (40%), Positives = 179/299 (59%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C V +Y+L+R K + +ER+EE+ L++ L+ E + EKVI
Sbjct: 24 KVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVISGKLFDRLRDENPDFR--EKVIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
IN ++ P L +S ED++++ ++I+I++H AATVRF++ ++ V LN TR ++ L++Q
Sbjct: 82 INSELTQPKLALSEEDKEIIIDSINIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIXXXXXXXXXXXXXXXXXXXQDFP 179
M +L++F++VSTAY + K ++E YPPPV P +I D P
Sbjct: 142 MKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYIYTKALAEYVVQQE-GAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RTM + AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIM-VYNCTTGSTNPFHWGEV 318
|
|
| UNIPROTKB|E1C023 FAR1 "Fatty acyl-CoA reductase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 122/299 (40%), Positives = 177/299 (59%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C VK +Y+L+RPK + R+EEI L++ L++EQ + EK+I
Sbjct: 24 KVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEITSCKLFDRLREEQPDFK--EKIIV 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I ++ P+L +S ++ L E I+I++H AATVRF++ ++ V LN T+ +L+L++Q
Sbjct: 82 ITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLRDAVQLNVLSTKQLLSLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIXXXXXXXXXXXXXXXXXXXQDFP 179
M +L++F++VSTAY + K +EE YPPPV P ++ D P
Sbjct: 142 MTNLEVFMHVSTAYAYCNRKHIEEVVYPPPVDPKKLMDSLEWMDDSLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYTYTKALAEYVVQQE-GARLNTAIIRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RTM AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTMRASNGAVADLVPVDVVVNMTLAAAWYSGVNRPRNIM-VYNCTTGGTNPFHWSEV 318
|
|
| UNIPROTKB|Q5ZM72 FAR1 "Fatty acyl-CoA reductase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 122/299 (40%), Positives = 177/299 (59%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C VK +Y+L+RPK + R+EEI L++ L++EQ + EK+I
Sbjct: 24 KVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEITSCKLFDRLREEQPDFK--EKIIV 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I ++ P+L +S ++ L E I+I++H AATVRF++ ++ V LN T+ +L+L++Q
Sbjct: 82 ITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLRDAVQLNVLSTKQLLSLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIXXXXXXXXXXXXXXXXXXXQDFP 179
M +L++F++VSTAY + K +EE YPPPV P ++ D P
Sbjct: 142 MTNLEVFMHVSTAYAYCNRKHIEEVVYPPPVDPKKLMDSLEWMDDSLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYTYTKALAEYVVQQE-GARLNTAIIRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RTM AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTMRASNGAVADLVPVDVVVNMTLAAAWYSGVNRPRNIM-VYNCTTGGTNPFHWSEV 318
|
|
| MGI|MGI:1914670 Far1 "fatty acyl CoA reductase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 120/299 (40%), Positives = 179/299 (59%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C V +Y+L+R K + +ER+EEI S L++ L+ E + EK+I
Sbjct: 24 KVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSKLFDRLRDENPDFR--EKIIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
IN ++ P L +S ED++++ ++ ++++H AATVRF++ ++ V LN TR ++ L++Q
Sbjct: 82 INSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIXXXXXXXXXXXXXXXXXXXQDFP 179
M +L++F++VSTAY + K ++E YPPPV P +I D P
Sbjct: 142 MKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYIYTKALAEYVVQQE-GAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RTM + AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIM-VYNCTTGSTNPFHWGEV 318
|
|
| UNIPROTKB|A5PJQ0 FAR1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 119/299 (39%), Positives = 179/299 (59%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C V +Y+L+R K + +ER+EE+ L++ L+ E + EK+I
Sbjct: 24 KVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVISGKLFDRLRDENPDFR--EKIIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
IN ++ P L +S ED++++ ++ +I++H AATVRF++ ++ V LN TR ++ L++Q
Sbjct: 82 INSELTQPKLALSEEDKEIIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIXXXXXXXXXXXXXXXXXXXQDFP 179
M +L++F++VSTAY + K ++E YPPPV P +I D P
Sbjct: 142 MKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + +I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYIYTKALAEYVVQQE-GAKLNVVIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RTM + AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTMRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNIM-VYNCTTGSTNPFHWGEV 318
|
|
| RGD|1306647 Far1 "fatty acyl CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 118/299 (39%), Positives = 178/299 (59%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C V +Y+L+R K + +ER+EEI L++ L+ E + +K+I
Sbjct: 24 KVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLFDRLRDENPDFR--QKIIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
IN ++ P L +S ED++++ ++ ++++H AATVRF++ ++ V LN TR ++ L++Q
Sbjct: 82 INSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIXXXXXXXXXXXXXXXXXXXQDFP 179
M +L++F++VSTAY + K ++E YPPPV P +I D P
Sbjct: 142 MKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYIYTKALAEYVVQQE-GAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RTM + AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIM-VYNCTTGSTNPFHWGEV 318
|
|
| UNIPROTKB|Q66H50 Far1 "Fatty acyl-CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 118/299 (39%), Positives = 178/299 (59%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C V +Y+L+R K + +ER+EEI L++ L+ E + +K+I
Sbjct: 24 KVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLFDRLRDENPDFR--QKIIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
IN ++ P L +S ED++++ ++ ++++H AATVRF++ ++ V LN TR ++ L++Q
Sbjct: 82 INSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIXXXXXXXXXXXXXXXXXXXQDFP 179
M +L++F++VSTAY + K ++E YPPPV P +I D P
Sbjct: 142 MKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYIYTKALAEYVVQQE-GAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RTM + AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNIM-VYNCTTGSTNPFHWGEV 318
|
|
| UNIPROTKB|E9PNW8 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 118/299 (39%), Positives = 178/299 (59%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C V +Y+L+R K + +ER+EE+ L++ L+ E + EK+I
Sbjct: 24 KVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPDFR--EKIIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
IN ++ P L +S ED++++ ++ +I++H AATVRF++ ++ V LN TR ++ L++Q
Sbjct: 82 INSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIXXXXXXXXXXXXXXXXXXXQDFP 179
M +L++F++VSTAY + K ++E YPPPV P +I D P
Sbjct: 142 MKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYIYTKALAEYVVQQE-GAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RT+ + AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTIRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNIM-VYNCTTGSTNPFHWGEV 318
|
|
| UNIPROTKB|Q8WVX9 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 118/299 (39%), Positives = 178/299 (59%)
Query: 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C V +Y+L+R K + +ER+EE+ L++ L+ E + EK+I
Sbjct: 24 KVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPDFR--EKIIA 81
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
IN ++ P L +S ED++++ ++ +I++H AATVRF++ ++ V LN TR ++ L++Q
Sbjct: 82 INSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIXXXXXXXXXXXXXXXXXXXQDFP 179
M +L++F++VSTAY + K ++E YPPPV P +I D P
Sbjct: 142 MKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRP 201
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y YTK L E VV + A + I+RPSI+ WK+P PGW DN NGP+GL I AGKG
Sbjct: 202 NTYIYTKALAEYVVQQE-GAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKG 260
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTW-NFLSNPGNTMRVINLTANKDFQITWYDI 297
I+RT+ + AD +PVDV+VN L + W + ++ P N M V N T W ++
Sbjct: 261 ILRTIRASNNALADLVPVDVVVNMSLAAAWYSGVNRPRNIM-VYNCTTGSTNPFHWGEV 318
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 318 | |||
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 1e-102 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 1e-77 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 1e-42 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 1e-30 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 1e-26 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 1e-19 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 4e-19 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 3e-16 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 8e-11 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 2e-10 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 5e-09 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 0.003 | |
| TIGR03443 | 1389 | TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh | 0.003 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 301 bits (772), Expect = e-102
Identities = 118/309 (38%), Positives = 179/309 (57%), Gaps = 4/309 (1%)
Query: 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+C ++ KIY+L+R K +++ ERL E+ + L++ + K++P
Sbjct: 14 KVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNLNPLF--ESKIVP 71
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
I GD++ P+LG+S ED Q L E ++I+ H AATV FD+ + + +N GT +L L+K+
Sbjct: 72 IEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDERLDEALSINVLGTLRLLELAKR 131
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
L+ FV+VSTAY + +++EEK YPPP P +I+ EL+ ELE +LL P
Sbjct: 132 CKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLIDILELMDDLELERATPKLLGGHP 191
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239
N Y +TK L E +V + +P +I+RPSI+ K+P PGW DN NGP GL + GKG
Sbjct: 192 NTYTFTKALAERLVLKERG-NLPLVIVRPSIVGATLKEPFPGWIDNFNGPDGLFLAYGKG 250
Query: 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 299
I+RTM D + AD +PVDV+ N +L + + V + ++ TW + E
Sbjct: 251 ILRTMNADPNAVADIIPVDVVANALLAAAAYSGVRKPRELEVYHCGSSDVNPFTWGEAEE 310
Query: 300 NGKDIARNK 308
+
Sbjct: 311 LINQYLKKN 319
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 1e-77
Identities = 97/266 (36%), Positives = 142/266 (53%), Gaps = 32/266 (12%)
Query: 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERL-EEIFQSPLYEALKKEQSESAIFEKVIP 59
KVLLEK+LR+ VKIY L+R K +++ ERL +E+ + L++ LK E++IP
Sbjct: 10 KVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLK-------ALERIIP 62
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
+ GD++ P+LG+S ED Q L+E + ++ H AATV F + N GTR++L L+KQ
Sbjct: 63 VAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTREVLRLAKQ 122
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
M L F +VSTAY + + + EK L + + LL P
Sbjct: 123 MKKLP-FHHVSTAYVNGER-------------GGLLEEKPYKLDE-----DEPALLGGLP 163
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNIN-GPTGLLIGAGK 238
NGY +K L E +V E G+P +I RPSII + GW + + GP GLL GAG
Sbjct: 164 NGYTQSKWLAEQLVREAAG-GLPVVIYRPSIITG---ESRTGWINGDDFGPRGLLGGAGL 219
Query: 239 GIIRTMYCDYSTCADFLPVDVLVNGV 264
G++ + D D +PVD + N +
Sbjct: 220 GVLPDILGDPDARLDLVPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 1e-42
Identities = 91/308 (29%), Positives = 162/308 (52%), Gaps = 53/308 (17%)
Query: 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERL-EEIFQSPLYEALKK---EQSESAIFE 55
K+ +EKILR NV K+Y+LLR K++ +RL +E+ L++ L++ E S I E
Sbjct: 25 KIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISE 84
Query: 56 KVIPINGDVAVPDLGISAED--RQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDM 113
KV P+ GD++ DLG+ + +M E I IV ++AAT FD+ + +NT G ++
Sbjct: 85 KVTPVPGDISYDDLGVKDSNLREEMWKE-IDIVVNLAATTNFDERYDVALGINTLGALNV 143
Query: 114 LNLSKQMIHLQLFVYVSTAY-CHPKEKVLEEKTYPPPVSPHNVIEKAELLSKN------- 165
LN +K+ + +++ ++VSTAY C K ++ EK + E L+ N
Sbjct: 144 LNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFH----------MGETLNGNRKLDINE 193
Query: 166 ELELLKQEL----------------LQDF----------PNGYAYTKCLCEGVVTEYMEA 199
E +L+K++L ++D PN Y +TK + E ++ + E
Sbjct: 194 EKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKE- 252
Query: 200 GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDV 259
+P +I+RP++I +K+P PGW + + +++G GKG + D ++ D +P D+
Sbjct: 253 NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADM 312
Query: 260 LVNGVLLS 267
+VN ++++
Sbjct: 313 VVNAMIVA 320
|
Length = 491 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 1e-30
Identities = 90/306 (29%), Positives = 153/306 (50%), Gaps = 43/306 (14%)
Query: 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-EIFQSPLYEALKK---EQSESAIFE 55
KVL+EKILRT +V KIY+L++ K + + ERL+ E+ + L++ L++ + +S +
Sbjct: 133 KVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLS 192
Query: 56 KVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLN 115
K++P+ G+V +LG+ + +++ + ++ + AA FD+ + +NTRG +++
Sbjct: 193 KLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMS 252
Query: 116 LSKQMIHLQLFVYVSTAYCH-PKEKVLEEKTY-----------PPPVSPHNV----IE-- 157
+K+ L+LF+ VSTAY + ++ + EK + PHN IE
Sbjct: 253 FAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAE 312
Query: 158 -KAELLSKNE---------------LELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGM 201
K L SK LE K QD Y +TK + E V+ M +
Sbjct: 313 IKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQD---TYVFTKAMGEMVINS-MRGDI 368
Query: 202 PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLV 261
P +I+RPS+I WKDP PGW + +++ GKG + D + D +P D++V
Sbjct: 369 PVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVV 428
Query: 262 NGVLLS 267
N L +
Sbjct: 429 NATLAA 434
|
Length = 605 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 1e-26
Identities = 61/268 (22%), Positives = 105/268 (39%), Gaps = 50/268 (18%)
Query: 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPIN 61
LL ++L+ KIY L+R K + + ERL + + + ++ +
Sbjct: 14 YLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKE-----YGLNLWDELELSRIKVVV 68
Query: 62 GDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMI 121
GD++ P+LG+S +D Q L+E + ++ H A V + + N GT+++L L+
Sbjct: 69 GDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEELKPANVLGTKELLKLAATG- 127
Query: 122 HLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQEL--LQDFP 179
L+ +VST + AE + + E L P
Sbjct: 128 KLKPLHFVSTLS----------------------VFSAEEYNALDDEESDDMLESQNGLP 165
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPT------GLL 233
NGY +K + E ++ E G+P I+RP I D+ G L
Sbjct: 166 NGYIQSKWVAEKLLREAANRGLPVAIIRPGNIFG----------DSETGIGNTDDFFWRL 215
Query: 234 IGAGKGIIRT-MYCDYSTCADFLPVDVL 260
+ KG ++ +Y D PVD +
Sbjct: 216 L---KGCLQLGIYPISGAPLDLSPVDWV 240
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 86.7 bits (215), Expect = 1e-19
Identities = 68/291 (23%), Positives = 114/291 (39%), Gaps = 60/291 (20%)
Query: 3 LLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 62
L++++L K+ +L+R + + ER+EE ++V + G
Sbjct: 14 LVKRLLEN--GFKVLVLVRSESLGEAHERIEE---------------AGLEADRVRVLEG 56
Query: 63 DVAVPDLGISAEDRQMLSETIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSK 118
D+ P+LG+SA + L+ + V H AA+ F +D +T N GT +L L+
Sbjct: 57 DLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRT----NIDGTEHVLELAA 112
Query: 119 QMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDF 178
+ + +Q F YVSTAY + E EL Q+F
Sbjct: 113 R-LDIQRFHYVSTAYV------------AGNREGNI----------RETELNPG---QNF 146
Query: 179 PNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIG-AG 237
N Y +K E +V +P + RPSI + D G + I+G LL A
Sbjct: 147 KNPYEQSKAEAEQLVRAAATQ-IPLTVYRPSI---VVGDSKTGRIEKIDGLYELLNLLAK 202
Query: 238 KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANK 288
G M + + +PVD + + ++ P ++ +LT
Sbjct: 203 LGRWLPMPGNKGARLNLVPVDYVADAIVY----LSKKPEANGQIFHLTDPT 249
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 86.3 bits (214), Expect = 4e-19
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 3 LLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 62
LLE++LR K+ L+R +++ ERL E +S L E E++ + G
Sbjct: 15 LLEELLRRSTQAKVICLVRAASEEHAMERLREALRS---YRL---WHEDLARERIEVVAG 68
Query: 63 DVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFL---NTRGTRDMLNLSKQ 119
D++ P LG+S + + L+E + + H A V +++ Y L N GTR++L L+
Sbjct: 69 DLSEPRLGLSDAEWERLAENVDTIVHNGALV---NWVYPYSELRGANVLGTREVLRLA-A 124
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
+ YVST V + V E ++
Sbjct: 125 SGRAKPLHYVSTI------SVG------AAIDLSTVTEDDATVTP----------PPGLA 162
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIII 212
GYA +K + E +V E + G+P I+RP I+
Sbjct: 163 GGYAQSKWVAELLVREASDRGLPVTIVRPGRIL 195
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 3e-16
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 3 LLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 62
LL ++L + K+ L+R + ++ + RLE+ F LY E S ++V + G
Sbjct: 16 LLLELLDR-SDAKVICLVRAQSDEAALARLEKTF--DLY-RHWDELSA----DRVEVVAG 67
Query: 63 DVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFL---NTRGTRDMLNLSKQ 119
D+A PDLG+S Q L+E + ++ H AA V +++ Y L N GT ++L L+
Sbjct: 68 DLAEPDLGLSERTWQELAENVDLIIHNAALV---NHVFPYSELRGANVLGTAEVLRLA-A 123
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
+ YVS+ V E N + +S + + Q
Sbjct: 124 TGKPKPLHYVSSI------SVGE------TEYYSNFTVDFDEISPT------RNVGQGLA 165
Query: 180 NGYAYTKCLCEGVVTEYMEAGMPCMILRPSIII 212
GY +K + E +V E + G+P I RP I
Sbjct: 166 GGYGRSKWVAEKLVREAGDRGLPVTIFRPGYIT 198
|
Length = 382 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 8e-11
Identities = 44/193 (22%), Positives = 71/193 (36%), Gaps = 51/193 (26%)
Query: 85 IVYHIAATVRFDDYMQ--TYVFL-NTRGTRDMLNLSKQMIHLQLFVYVSTA--YCHPKEK 139
+V H+AA V F N GT ++L +++ ++ FVY S+A Y P+
Sbjct: 33 VVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKA-GVKRFVYASSASVYGSPEGL 91
Query: 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA 199
EE+T P P+SP Y +K E ++ Y E+
Sbjct: 92 PEEEETPPRPLSP-----------------------------YGVSKLAAEHLLRSYGES 122
Query: 200 -GMPCMILRPSIII-----PIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCAD 253
G+P +ILR + + P + + L + G R D
Sbjct: 123 YGLPVVILRLANVYGPGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTR----------D 172
Query: 254 FLPVDVLVNGVLL 266
F+ VD +V +L
Sbjct: 173 FIHVDDVVRAILH 185
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 2e-10
Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 69/237 (29%)
Query: 3 LLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 62
L+ ++L +++L+R + S RLE AL ++V+P+ G
Sbjct: 16 LVSRLLDRRREATVHVLVRRQ----SLSRLE---------ALAAYWGA----DRVVPLVG 58
Query: 63 DVAVPDLGISAEDRQMLSETIHIVYHIAA----TVRFDDYMQTYVFLNTRGTRDMLNLSK 118
D+ P LG+S D L + H V H+AA T + N GTR+++ L++
Sbjct: 59 DLTEPGLGLSEADIAELGDIDH-VVHLAAIYDLTADEEAQRAA----NVDGTRNVVELAE 113
Query: 119 QMIHLQLFVYVST---AYCHP---KEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQ 172
+ + F +VS+ A + +E +E
Sbjct: 114 R-LQAATFHHVSSIAVAGDYEGVFREDDFDEG---------------------------- 144
Query: 173 ELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGP 229
Q P Y TK E +V E E G+P + RP++++ D G D I+GP
Sbjct: 145 ---QGLPTPYHRTKFEAEKLVRE--ECGLPWRVYRPAVVV---GDSRTGEMDKIDGP 193
|
Length = 657 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 5e-09
Identities = 54/264 (20%), Positives = 96/264 (36%), Gaps = 60/264 (22%)
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYM----QTYVFLNTRGTRDMLN 115
+ D+ DL ++ V H+AA D ++ +N GT ++L
Sbjct: 47 VVLDLTDRDL-----VDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLE 101
Query: 116 LSKQMIHLQLFVYVSTAYC----HPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLK 171
++ ++ FV+ S+ P + E+ P P++P
Sbjct: 102 AARAA-GVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNP------------------- 141
Query: 172 QELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPLPGWTDNING-- 228
Y +K E ++ Y G+P +ILRP + PG +++
Sbjct: 142 ----------YGVSKLAAEQLLRAYARLYGLPVVILRPFNVYG------PGDKPDLSSGV 185
Query: 229 PTGLLIGAGKGI-IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287
+ + KG I + D S DF+ VD + + +LL L NP V N+ +
Sbjct: 186 VSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLL----ALENPDG--GVFNIGSG 239
Query: 288 KDFQITWYDIIENGKDIARNKVPL 311
IT ++ E + +K PL
Sbjct: 240 TAE-ITVRELAEAVAEAVGSKAPL 262
|
Length = 314 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.003
Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 42/137 (30%)
Query: 85 IVYHIAATVRF-----DDYMQTYVFLNTRGTRDMLN--LSKQMIHLQLFVYVST--AYCH 135
V+H+AA + +T N GTR++L+ L ++ V+ S+ A
Sbjct: 65 RVFHLAAFTSLWAKDRKELYRT----NVEGTRNVLDAALEAG---VRRVVHTSSIAALGG 117
Query: 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTE 195
P + ++E T + FPN Y +K L E V E
Sbjct: 118 PPDGRIDETTPWNE--------------------------RPFPNDYYRSKLLAELEVLE 151
Query: 196 YMEAGMPCMILRPSIII 212
G+ +I+ PS +
Sbjct: 152 AAAEGLDVVIVNPSAVF 168
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.003
Identities = 47/213 (22%), Positives = 88/213 (41%), Gaps = 34/213 (15%)
Query: 3 LLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPING 62
LL + R+ N K++ +R K + ERL + + Y +E + ++ + G
Sbjct: 991 LLTR--RSNSNFKVFAHVRAKSEEAGLERLRKTGTT--YGIWDEEWAS-----RIEVVLG 1041
Query: 63 DVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFL---NTRGTRDMLNLSKQ 119
D++ G+S E L+ + ++ H A V ++ Y L N GT ++LNL +
Sbjct: 1042 DLSKEKFGLSDEKWSDLTNEVDVIIHNGALVH---WVYPYSKLRDANVIGTINVLNLCAE 1098
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQ--- 176
+ F +VS+ L+ + Y V EL+ + + + L
Sbjct: 1099 G-KAKQFSFVSST------SALDTEYY--------VNLSDELVQAGGAGIPESDDLMGSS 1143
Query: 177 -DFPNGYAYTKCLCEGVVTEYMEAGMPCMILRP 208
GY +K + E ++ E + G+ I+RP
Sbjct: 1144 KGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRP 1176
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 318 | |||
| KOG1221|consensus | 467 | 100.0 | ||
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.98 | |
| KOG1502|consensus | 327 | 99.98 | ||
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.97 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.96 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.96 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.96 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.96 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.96 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.96 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.96 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.96 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.96 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.96 | |
| KOG0747|consensus | 331 | 99.96 | ||
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.95 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.95 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.95 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.95 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.95 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.95 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.95 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.95 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.95 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.95 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.95 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.95 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.94 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.94 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.94 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.94 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.94 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.93 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.93 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.93 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.93 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.93 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.93 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.93 | |
| KOG1371|consensus | 343 | 99.92 | ||
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.92 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.91 | |
| KOG1429|consensus | 350 | 99.91 | ||
| KOG1430|consensus | 361 | 99.91 | ||
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.9 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.9 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.9 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.89 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.89 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.89 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.88 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.87 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.85 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.85 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.83 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.8 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.76 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.75 | |
| KOG2865|consensus | 391 | 99.72 | ||
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.72 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.72 | |
| KOG1372|consensus | 376 | 99.7 | ||
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.68 | |
| KOG1431|consensus | 315 | 99.67 | ||
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.67 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.64 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.62 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.6 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.57 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.57 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.56 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.54 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.53 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.53 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.52 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.49 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.47 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.47 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.46 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.45 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.44 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.43 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.42 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.42 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.41 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.4 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.4 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.4 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.39 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.38 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.36 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.36 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.36 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.35 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.35 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.34 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.32 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.32 | |
| KOG2774|consensus | 366 | 99.3 | ||
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.3 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.29 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.29 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.29 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.28 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.28 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.27 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.27 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.27 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.27 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.26 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.26 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.26 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.25 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.25 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.25 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.24 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.24 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.24 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.24 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.23 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.23 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.22 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.21 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.21 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.2 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.2 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.2 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.19 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.18 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.18 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.18 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.17 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.16 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.15 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.13 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.13 | |
| KOG4288|consensus | 283 | 99.12 | ||
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.12 | |
| KOG3019|consensus | 315 | 99.11 | ||
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.11 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.11 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.09 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.08 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.08 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.08 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.06 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.06 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.06 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.05 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.05 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.05 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.05 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.05 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.05 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.02 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.02 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.02 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.01 | |
| KOG1205|consensus | 282 | 99.01 | ||
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.01 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.01 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.99 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.97 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.96 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.93 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.93 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.93 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.93 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.92 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.88 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.88 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.86 | |
| KOG1611|consensus | 249 | 98.85 | ||
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.85 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.85 | |
| KOG4039|consensus | 238 | 98.85 | ||
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.84 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.84 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 98.83 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.81 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 98.81 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.81 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.8 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.78 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.78 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.77 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.77 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.71 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.7 | |
| KOG1610|consensus | 322 | 98.68 | ||
| KOG1201|consensus | 300 | 98.64 | ||
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 98.63 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.62 | |
| KOG1203|consensus | 411 | 98.55 | ||
| KOG1208|consensus | 314 | 98.5 | ||
| KOG1200|consensus | 256 | 98.42 | ||
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.37 | |
| KOG1210|consensus | 331 | 98.34 | ||
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.28 | |
| KOG0725|consensus | 270 | 98.28 | ||
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.11 | |
| KOG1207|consensus | 245 | 98.11 | ||
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.99 | |
| KOG4169|consensus | 261 | 97.99 | ||
| KOG1209|consensus | 289 | 97.98 | ||
| KOG1014|consensus | 312 | 97.79 | ||
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.64 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.6 | |
| PLN00106 | 323 | malate dehydrogenase | 97.32 | |
| KOG1204|consensus | 253 | 97.13 | ||
| KOG1199|consensus | 260 | 96.98 | ||
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 96.5 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 95.62 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 95.52 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 95.17 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 94.46 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 94.26 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 94.07 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 93.1 | |
| KOG2733|consensus | 423 | 92.96 | ||
| KOG1478|consensus | 341 | 92.92 | ||
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 92.85 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 92.14 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 88.43 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 88.05 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 87.53 | |
| KOG1202|consensus | 2376 | 87.07 | ||
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 86.97 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 86.64 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 85.35 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 84.41 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 83.19 | |
| PF12683 | 275 | DUF3798: Protein of unknown function (DUF3798); In | 82.48 |
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=318.72 Aligned_cols=313 Identities=43% Similarity=0.757 Sum_probs=291.4
Q ss_pred ChhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
|.|+++||..++++ +||.+.|.+..++..+|+....+.++|+.+++.. ++...++..+.||+.++++|+++++.+.+
T Consensus 26 KVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~--p~~l~Kv~pi~GDi~~~~LGis~~D~~~l 103 (467)
T KOG1221|consen 26 KVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKK--PEALEKVVPIAGDISEPDLGISESDLRTL 103 (467)
T ss_pred HHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhC--ccceecceeccccccCcccCCChHHHHHH
Confidence 56899999998899 9999999999999999999999999999999998 77888999999999999999999999988
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCC--ChhHHHH
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPV--SPHNVIE 157 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~--~~~~~~~ 157 (318)
.+++++|||+||.+.|+++++.....|..||++++++|+++.+.+-|+|+||+|+......+.|..++.+. ++.....
T Consensus 104 ~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~ 183 (467)
T KOG1221|consen 104 ADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILK 183 (467)
T ss_pred HhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCccccCCHHHHHh
Confidence 89999999999999999999999999999999999999999899999999999999777789999998887 7888889
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHh
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAG 237 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~ 237 (318)
..++++++.++...+.+..+|||.|..+|.++|.++.+..+ ++|++|+||++|.....+|.+||.++++|+..++..+.
T Consensus 184 ~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~-~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~g 262 (467)
T KOG1221|consen 184 LDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE-NLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYG 262 (467)
T ss_pred hhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc-CCCeEEEcCCceeccccCCCCCccccCCCCceEEEEec
Confidence 99999999999999999999999999999999999999988 99999999999999999999999999999999999999
Q ss_pred cCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCC-CCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCCCCCCcc
Q psy7539 238 KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPG-NTMRVINLTANKDFQITWYDIIENGKDIARNKVPLNNPII 316 (318)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~-~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p~~~~~~ 316 (318)
+|.++.+..+++...|+|+||.||.+++.+...-....+ ....+||+++...++++|.++.+...+.+ .+.|++..+|
T Consensus 263 kGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~-~~~Pl~~~iw 341 (467)
T KOG1221|consen 263 KGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYF-EKIPLEKMIW 341 (467)
T ss_pred cceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhc-ccCCccccee
Confidence 999999999999999999999999999988744332211 23669999998889999999999999998 8999999999
Q ss_pred C
Q psy7539 317 C 317 (318)
Q Consensus 317 ~ 317 (318)
|
T Consensus 342 ~ 342 (467)
T KOG1221|consen 342 Y 342 (467)
T ss_pred c
Confidence 8
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=317.73 Aligned_cols=314 Identities=28% Similarity=0.528 Sum_probs=253.1
Q ss_pred ChhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHH-HHHcChhhHHHhhhcCc---chhccceEEEeccCCCCCCCCCHHH
Q psy7539 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-EIFQSPLYEALKKEQSE---SAIFEKVIPINGDVAVPDLGISAED 75 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~-~~~~~~~~~~~~~~~~~---~~~~~~i~~~~gDl~~~~~gl~~~~ 75 (318)
++|+++||..++++ +|+|++|+++.....+|+. ++.+...|..++...+. .....+++++.||++++++||+...
T Consensus 25 ~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~~LGLs~~~ 104 (491)
T PLN02996 25 KIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSN 104 (491)
T ss_pred HHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCcCCCCChHH
Confidence 47999999876788 8999999998889999986 67777788777654420 1112689999999999999997766
Q ss_pred -HHHHhcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc-ccccccCCCCCC--
Q psy7539 76 -RQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEEKTYPPPVS-- 151 (318)
Q Consensus 76 -~~~~~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~-~~~E~~~~~p~~-- 151 (318)
+..+++++|+|||+||.+++..++....++|+.||.+|+++|++..++++|||+||++++|... .+.|..++.+.+
T Consensus 105 ~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~ 184 (491)
T PLN02996 105 LREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLN 184 (491)
T ss_pred HHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeeeecCCCccccc
Confidence 6778889999999999988877888899999999999999999865789999999999998744 567776664442
Q ss_pred ------hhHHH--------HHHhh-hcHHHHHH------HHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccc
Q psy7539 152 ------PHNVI--------EKAEL-LSKNELEL------LKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSI 210 (318)
Q Consensus 152 ------~~~~~--------~~~~~-~~~~~~~~------~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~ 210 (318)
+.... ...++ ++++.++. ..+....++++.|+.||+++|+++..+.. +++++++||++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~-~lpv~i~RP~~ 263 (491)
T PLN02996 185 GNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKE-NLPLVIIRPTM 263 (491)
T ss_pred ccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcC-CCCEEEECCCE
Confidence 22111 11111 33333332 23333567889999999999999998876 99999999999
Q ss_pred cccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCC
Q psy7539 211 IIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF 290 (318)
Q Consensus 211 v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~ 290 (318)
|+|+...|.+||++++.++..++..+..|....+++++++.+|++||||+|++++.++.+.... ...+++||++++..+
T Consensus 264 V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~-~~~~~vYNi~s~~~~ 342 (491)
T PLN02996 264 ITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGG-QGSEIIYHVGSSLKN 342 (491)
T ss_pred eccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhcc-CCCCcEEEecCCCCC
Confidence 9999999999999999999999998999988888999999999999999999999998863210 012579999977657
Q ss_pred ceeHHHHHHHHHHhhcccCCCC----CCccC
Q psy7539 291 QITWYDIIENGKDIARNKVPLN----NPIIC 317 (318)
Q Consensus 291 ~~~~~el~~~i~~~~~~~~p~~----~~~~~ 317 (318)
++++.++++.+.+.+ .+.|+. +.+||
T Consensus 343 ~~s~~ei~~~~~~~~-~~~p~~~~~~~~~~~ 372 (491)
T PLN02996 343 PVKFSNLHDFAYRYF-SKNPWINKEGSPVKV 372 (491)
T ss_pred cccHHHHHHHHHHHh-hhCCCcCCCCCeEee
Confidence 899999999999999 788887 47776
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=310.59 Aligned_cols=315 Identities=27% Similarity=0.476 Sum_probs=256.4
Q ss_pred ChhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHH-HHHcChhhHHHhhhcCc---chhccceEEEeccCCCCCCCCCHHH
Q psy7539 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLE-EIFQSPLYEALKKEQSE---SAIFEKVIPINGDVAVPDLGISAED 75 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~-~~~~~~~~~~~~~~~~~---~~~~~~i~~~~gDl~~~~~gl~~~~ 75 (318)
++|+++||..++++ +|++++|.++.....+|+. ++++.++|+.+++..+. .....+++++.||++++.+||+++.
T Consensus 133 k~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~ 212 (605)
T PLN02503 133 KVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDL 212 (605)
T ss_pred HHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCcccCCCHHH
Confidence 47999999876777 9999999988888999996 67778889888776521 1124689999999999999999999
Q ss_pred HHHHhcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc-ccccccCC-------
Q psy7539 76 RQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEEKTYP------- 147 (318)
Q Consensus 76 ~~~~~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~-~~~E~~~~------- 147 (318)
.+.+.+++|+|||+||.+++..+++...++|+.||.+++++|.+.+++++|||+||+++++... .+.|+.++
T Consensus 213 ~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~ 292 (605)
T PLN02503 213 ADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIAR 292 (605)
T ss_pred HHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeeeecCccccccc
Confidence 9999899999999999998888888999999999999999999865678999999999999864 78887775
Q ss_pred ------------CCCChhHHHHHH----h--hhcHHHHHH-----HHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEE
Q psy7539 148 ------------PPVSPHNVIEKA----E--LLSKNELEL-----LKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCM 204 (318)
Q Consensus 148 ------------~p~~~~~~~~~~----~--~~~~~~~~~-----~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 204 (318)
.+.++....++. + ..+.+..+. ..+....+|||.|..||.++|+++.++.. ++|++
T Consensus 293 ~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~~-~LPv~ 371 (605)
T PLN02503 293 ELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMRG-DIPVV 371 (605)
T ss_pred ccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhcC-CCCEE
Confidence 344666555443 1 112222232 34456778999999999999999998776 89999
Q ss_pred EecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEe
Q psy7539 205 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 284 (318)
Q Consensus 205 ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni 284 (318)
|+||++|.+...+|.+||.++.......+..+.+|..+.++++++...|+||||.||++++.++..........+++||+
T Consensus 372 IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ 451 (605)
T PLN02503 372 IIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQI 451 (605)
T ss_pred EEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEe
Confidence 99999999999999999999944333434444588888899999999999999999999999954322111123789999
Q ss_pred eCCCCCceeHHHHHHHHHHhhcccCCCCCCccC
Q psy7539 285 TANKDFQITWYDIIENGKDIARNKVPLNNPIIC 317 (318)
Q Consensus 285 ~~~~~~~~~~~el~~~i~~~~~~~~p~~~~~~~ 317 (318)
+++..+|++|.++.+.+.+++ .+.|+.+..|+
T Consensus 452 ts~~~nP~t~~~~~~~~~~~~-~~~P~~~~~~~ 483 (605)
T PLN02503 452 ASSVVNPLVFQDLARLLYEHY-KSSPYMDSKGR 483 (605)
T ss_pred CCCCCCCeEHHHHHHHHHHHH-hhCCcccccCc
Confidence 987778999999999999998 88899887765
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=237.08 Aligned_cols=247 Identities=19% Similarity=0.224 Sum_probs=198.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccc--eEEEeccCCCCCCCCCHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEK--VIPINGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~gDl~~~~~gl~~~~~~~ 78 (318)
+|.+.+|++. |++|+++..-.+.. .+...+ +.+++||+.|. +.+.+
T Consensus 14 SHtv~~Ll~~--G~~vvV~DNL~~g~------------------------~~~v~~~~~~f~~gDi~D~------~~L~~ 61 (329)
T COG1087 14 SHTVRQLLKT--GHEVVVLDNLSNGH------------------------KIALLKLQFKFYEGDLLDR------ALLTA 61 (329)
T ss_pred HHHHHHHHHC--CCeEEEEecCCCCC------------------------HHHhhhccCceEEeccccH------HHHHH
Confidence 3788999998 99999998875543 111222 68999999986 56888
Q ss_pred Hhc--CccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCC
Q psy7539 79 LSE--TIHIVYHIAATVRFDD---YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVS 151 (318)
Q Consensus 79 ~~~--~~d~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~ 151 (318)
+++ ++|.|||+||.....+ .+-++++.|+.||.+|+++|++. ++++|||.||+.+||... |++|+.+..|.
T Consensus 62 vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG~p~~~PI~E~~~~~p~- 139 (329)
T COG1087 62 VFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYGEPTTSPISETSPLAPI- 139 (329)
T ss_pred HHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcCCCCCcccCCCCCCCCC-
Confidence 876 7999999999864432 24479999999999999999996 999999999999999865 89998887776
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCC-cccCCCch
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPG-WTDNINGP 229 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g-~~~~~~~~ 229 (318)
|+||.||++.|+++..+.+ +++++++||..++.|...++.-| |..+....
T Consensus 140 ----------------------------NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thL 191 (329)
T COG1087 140 ----------------------------NPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLL 191 (329)
T ss_pred ----------------------------CcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchH
Confidence 9999999999999999999 89999999999999988776654 33433333
Q ss_pred HHHHHHHhcCcee--eEec------CCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHH
Q psy7539 230 TGLLIGAGKGIIR--TMYC------DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENG 301 (318)
Q Consensus 230 ~~~~~~~~~~~~~--~~~~------~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i 301 (318)
..++.....|... .++| ||...||+|||.|+|+++++|++.-... ....+||++++ .-.|+.|+++.+
T Consensus 192 ip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~--g~~~~~NLG~G--~G~SV~evi~a~ 267 (329)
T COG1087 192 IPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEG--GSNNIFNLGSG--NGFSVLEVIEAA 267 (329)
T ss_pred HHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhC--CceeEEEccCC--CceeHHHHHHHH
Confidence 3455555555544 2333 6788999999999999999999875532 12369999999 899999999999
Q ss_pred HHhhcccCCCCC
Q psy7539 302 KDIARNKVPLNN 313 (318)
Q Consensus 302 ~~~~~~~~p~~~ 313 (318)
++..|.++|.+.
T Consensus 268 ~~vtg~~ip~~~ 279 (329)
T COG1087 268 KKVTGRDIPVEI 279 (329)
T ss_pred HHHhCCcCceee
Confidence 999988777653
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=248.73 Aligned_cols=236 Identities=33% Similarity=0.535 Sum_probs=149.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcC-hhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQS-PLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
+||+++|+++.++++|+|++|+++.....+|+.+.+.. .++.... ....++|+++.||++++.|||+.+.+..+
T Consensus 10 ~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~-----~~~~~ri~~v~GDl~~~~lGL~~~~~~~L 84 (249)
T PF07993_consen 10 SHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLD-----KEALSRIEVVEGDLSQPNLGLSDEDYQEL 84 (249)
T ss_dssp HHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH------HHHTTTEEEEE--TTSGGGG--HHHHHHH
T ss_pred HHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhh-----hhhhccEEEEeccccccccCCChHHhhcc
Confidence 47999999993335999999988777888899766553 3333221 12357999999999999999999999999
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc-ccccccCCCCCChhHHHHH
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEEKTYPPPVSPHNVIEK 158 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~-~~~E~~~~~p~~~~~~~~~ 158 (318)
.+++|+|||+||.+++..+++++.++|+.||.+|+++|.+. +.++|+|+||+++.+... ...|.....
T Consensus 85 ~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~~~~~---------- 153 (249)
T PF07993_consen 85 AEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEKVYPE---------- 153 (249)
T ss_dssp HHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SSS-HH----------
T ss_pred ccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCccccccccc----------
Confidence 99999999999999999999999999999999999999974 666999999966665533 222211000
Q ss_pred HhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCC-chHHHHHHH
Q psy7539 159 AELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNIN-GPTGLLIGA 236 (318)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~-~~~~~~~~~ 236 (318)
+........+++++|..||+++|+++.++.+ .|++++|+|||+|+|... .||.+... .+..+...+
T Consensus 154 ---------~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~---~G~~~~~~~~~~~~~~~~ 221 (249)
T PF07993_consen 154 ---------EEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSR---TGWWNSDDFFPYLLRSCI 221 (249)
T ss_dssp ---------H--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSS---SS---TTBHHHHHHHHHH
T ss_pred ---------ccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCC---CceeeccchHHHHHHHHH
Confidence 0001111223459999999999999999997 599999999999999554 45555544 334455555
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHH
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGV 264 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~ 264 (318)
..|..+..++++....++++||.+|++|
T Consensus 222 ~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 222 ALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp HH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred HcCCcccccCCCCceEeEECHHHHHhhC
Confidence 5566666677777889999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=234.04 Aligned_cols=251 Identities=20% Similarity=0.187 Sum_probs=186.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+++++-++|.++.|..+..... . ........++.||++++ +.+.+++
T Consensus 11 ~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~-~-------------------~~~~~~~~~~~~Di~d~------~~l~~a~ 64 (280)
T PF01073_consen 11 SHIVRQLLERGYIYEVRVLDRSPPPKFLK-D-------------------LQKSGVKEYIQGDITDP------ESLEEAL 64 (280)
T ss_pred HHHHHHHHHCCCceEEEEcccccccccch-h-------------------hhcccceeEEEeccccH------HHHHHHh
Confidence 48999999992215899999876543211 0 11112344999999987 6899999
Q ss_pred cCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccC---Cccc---ccccCCCCCCh
Q psy7539 81 ETIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK---EKVL---EEKTYPPPVSP 152 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~---~~~~---~E~~~~~p~~~ 152 (318)
+++|+|||+|+.+... .+.+.++++|+.||++|+++|++. ++++|||+||.++++. ..++ +|..+. |.
T Consensus 65 ~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~-~~-- 140 (280)
T PF01073_consen 65 EGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGDPIINGDEDTPY-PS-- 140 (280)
T ss_pred cCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCCCcccCCcCCcc-cc--
Confidence 9999999999986544 356679999999999999999995 9999999999888765 2222 333211 11
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
.+.+.|+.||.++|++++++.. ..+..+++||+.|||+.....
T Consensus 141 ------------------------~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~------- 189 (280)
T PF01073_consen 141 ------------------------SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRL------- 189 (280)
T ss_pred ------------------------cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccc-------
Confidence 1228999999999999998764 348999999999999764321
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCC---CCCCCcEEEeeCCCCCcee-HHHHHHHHH
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSN---PGNTMRVINLTANKDFQIT-WYDIIENGK 302 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~---~~~~~~~~ni~~~~~~~~~-~~el~~~i~ 302 (318)
...+......|......+++....+++||+|+|.+++.|+++-... ....++.|+|+++ +|++ +.||...+.
T Consensus 190 --~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~--~p~~~~~~f~~~~~ 265 (280)
T PF01073_consen 190 --VPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDG--EPVPSFWDFMRPLW 265 (280)
T ss_pred --cchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECC--CccCcHHHHHHHHH
Confidence 1123333444545566788888999999999999999987642211 1235899999999 8999 999999999
Q ss_pred HhhcccCCCCCCcc
Q psy7539 303 DIARNKVPLNNPII 316 (318)
Q Consensus 303 ~~~~~~~p~~~~~~ 316 (318)
+.+|.+.|....++
T Consensus 266 ~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 266 EALGYPPPKSISLP 279 (280)
T ss_pred HHCCCCCCcccCCC
Confidence 99988877655544
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-31 Score=238.79 Aligned_cols=249 Identities=19% Similarity=0.144 Sum_probs=185.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+++ |++|+++.|...... ..+...... .. .....+++++.||+.+. +.+..++
T Consensus 29 ~~lv~~L~~~--g~~V~~~d~~~~~~~--~~~~~~~~~---------~~-~~~~~~~~~~~~Di~d~------~~l~~~~ 88 (348)
T PRK15181 29 SGLLEELLFL--NQTVIGLDNFSTGYQ--HNLDDVRTS---------VS-EEQWSRFIFIQGDIRKF------TDCQKAC 88 (348)
T ss_pred HHHHHHHHHC--CCEEEEEeCCCCcch--hhhhhhhhc---------cc-cccCCceEEEEccCCCH------HHHHHHh
Confidence 4799999998 899999998643221 111111100 00 11124688999999976 5788888
Q ss_pred cCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~ 155 (318)
+++|+|||+||..... .....+.++|+.||.+|+++|++. ++++|||+||..+|+... +..|+....|.
T Consensus 89 ~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~----- 162 (348)
T PRK15181 89 KNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSSTYGDHPDLPKIEERIGRPL----- 162 (348)
T ss_pred hCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHhhCCCCCCCCCCCCCCCCC-----
Confidence 9999999999975432 234568999999999999999996 899999999998887532 44554444443
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLI 234 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~ 234 (318)
+.|+.||.++|+++..+.+ ++++++++||+++||+...+.... ..-...++.
T Consensus 163 ------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~---~~~i~~~~~ 215 (348)
T PRK15181 163 ------------------------SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAY---SAVIPRWIL 215 (348)
T ss_pred ------------------------ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCcc---ccCHHHHHH
Confidence 8899999999999998877 799999999999999765432110 011234566
Q ss_pred HHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 235 GAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
.+..+....+++++.+.++|+||+|+|++++.++...... ..+++||++++ .+++++|+++.+.+.++
T Consensus 216 ~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~--~~~~~yni~~g--~~~s~~e~~~~i~~~~~ 283 (348)
T PRK15181 216 SLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA--SKNKVYNVAVG--DRTSLNELYYLIRDGLN 283 (348)
T ss_pred HHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccc--CCCCEEEecCC--CcEeHHHHHHHHHHHhC
Confidence 6666666667789999999999999999999877643210 12689999999 89999999999998874
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.5e-31 Score=220.29 Aligned_cols=242 Identities=19% Similarity=0.141 Sum_probs=198.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+.++.+++++++.+|+++..-.=.-+ .+-|.. -...++..|++||+.+. +.+..+++
T Consensus 15 nfvr~~~~~~~d~~v~~~DkLTYAgn-~~~l~~----------------~~~~~~~~fv~~DI~D~------~~v~~~~~ 71 (340)
T COG1088 15 NFVRYILNKHPDDHVVNLDKLTYAGN-LENLAD----------------VEDSPRYRFVQGDICDR------ELVDRLFK 71 (340)
T ss_pred HHHHHHHhcCCCceEEEEecccccCC-HHHHHh----------------hhcCCCceEEeccccCH------HHHHHHHH
Confidence 56788888877778888877531111 111211 12246899999999986 67888887
Q ss_pred --CccEEEEcccccCcchh---HHHHHHHhHHHHHHHHHHHHhcCCC-ccEEEEeccccccCCc----ccccccCCCCCC
Q psy7539 82 --TIHIVYHIAATVRFDDY---MQTYVFLNTRGTRDMLNLSKQMIHL-QLFVYVSTAYCHPKEK----VLEEKTYPPPVS 151 (318)
Q Consensus 82 --~~d~Vih~Aa~~~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~~~-~~~v~~SS~~~~~~~~----~~~E~~~~~p~~ 151 (318)
++|+|+|+||.++.+.+ +..|.++|+.||.+||+++++. .. .||+|+||.-|||... .++|.++-.|.
T Consensus 72 ~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~-~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~Ps- 149 (340)
T COG1088 72 EYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY-WGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPS- 149 (340)
T ss_pred hcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHh-cccceEEEeccccccccccCCCCCcccCCCCCCC-
Confidence 69999999999866543 4579999999999999999996 44 5999999988888732 57787766665
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPT 230 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~ 230 (318)
++|++||+.++.++++|.+ +|++++|.|+++-||+...|. . .. -
T Consensus 150 ----------------------------SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE-----K-lI-P 194 (340)
T COG1088 150 ----------------------------SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE-----K-LI-P 194 (340)
T ss_pred ----------------------------CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch-----h-hh-H
Confidence 9999999999999999999 999999999999999876653 1 12 2
Q ss_pred HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 231 GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
.++...+.|...++.|+|.+.|||+||+|.|+|+...+.+... +++|||+++ +..+-.|+++.|.+.+|...|
T Consensus 195 ~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~-----GE~YNIgg~--~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 195 LMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI-----GETYNIGGG--NERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred HHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC-----CceEEeCCC--ccchHHHHHHHHHHHhCcccc
Confidence 4667777888889999999999999999999999999999886 899999999 889999999999999977666
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-30 Score=224.56 Aligned_cols=252 Identities=16% Similarity=0.161 Sum_probs=194.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
.||++.||++ ||.|++.+|+.+.....+.|.++ +...+++..+.+||.++ .++...+
T Consensus 20 swivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l---------------~~a~~~l~l~~aDL~d~------~sf~~ai 76 (327)
T KOG1502|consen 20 SWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKL---------------EGAKERLKLFKADLLDE------GSFDKAI 76 (327)
T ss_pred HHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhc---------------ccCcccceEEecccccc------chHHHHH
Confidence 3799999999 99999999987765555555544 44556799999999998 4899999
Q ss_pred cCccEEEEcccccCcchh--HHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC-cccccccCCCCCChhHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDY--MQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE-KVLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~--~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~-~~~~E~~~~~p~~~~~~~~ 157 (318)
++||+|||+|.++.++.. ..+..++++.||.|+|++|++.+.++|+|++||+++.... ...++....+-..|++..-
T Consensus 77 ~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~ 156 (327)
T KOG1502|consen 77 DGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDF 156 (327)
T ss_pred hCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHH
Confidence 999999999999876543 5589999999999999999998679999999997665432 2222222222223332211
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
... ..+.|..||..+|+..+++++ .+++.+++.|+.|+|+...+ ........+..+
T Consensus 157 ~~~-----------------~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~------~l~~s~~~~l~~ 213 (327)
T KOG1502|consen 157 CRC-----------------KKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP------SLNSSLNALLKL 213 (327)
T ss_pred HHh-----------------hHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc------ccchhHHHHHHH
Confidence 000 007899999999999999999 88999999999999976654 334446788888
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
+.|.... .......||||+|||.+++.+++++.. .+.|.+.+. ..++.|+++++.+.+ +.++
T Consensus 214 i~G~~~~---~~n~~~~~VdVrDVA~AHv~a~E~~~a-----~GRyic~~~---~~~~~ei~~~l~~~~-P~~~ 275 (327)
T KOG1502|consen 214 IKGLAET---YPNFWLAFVDVRDVALAHVLALEKPSA-----KGRYICVGE---VVSIKEIADILRELF-PDYP 275 (327)
T ss_pred Hhccccc---CCCCceeeEeHHHHHHHHHHHHcCccc-----CceEEEecC---cccHHHHHHHHHHhC-CCCC
Confidence 8875443 233444599999999999999999987 678998887 566999999999998 5554
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=227.42 Aligned_cols=267 Identities=23% Similarity=0.281 Sum_probs=192.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++||.+ ...+|+|++|..+.+.+.+||.+.+.- +..+. ....++|+++.||++++.+||+...|+.+.
T Consensus 14 ~yLl~eLL~~-~~~kv~cLVRA~s~E~a~~RL~~~~~~--~~~~~-----e~~~~ri~vv~gDl~e~~lGL~~~~~~~La 85 (382)
T COG3320 14 AYLLLELLDR-SDAKVICLVRAQSDEAALARLEKTFDL--YRHWD-----ELSADRVEVVAGDLAEPDLGLSERTWQELA 85 (382)
T ss_pred HHHHHHHHhc-CCCcEEEEEecCCHHHHHHHHHHHhhh--hhhhh-----hhhcceEEEEecccccccCCCCHHHHHHHh
Confidence 3789999988 456999999999999999999988761 11111 345679999999999999999999999999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+.+|.|||+||.+++-.+|+++..+||.||.+++++|... +.|+|+|+||.++.........+....-.+
T Consensus 86 ~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~~~~~~~~~~~--------- 155 (382)
T COG3320 86 ENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYSNFTVDFDEIS--------- 155 (382)
T ss_pred hhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccCCCcccccccc---------
Confidence 9999999999999999999999999999999999999994 899999999988876532111110000000
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
......++.+++|++|||++|.+++.....|++++|+|||+|.|.+.++. +...+++..++.+.
T Consensus 156 ---------~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~-------~n~~D~~~Rlv~~~ 219 (382)
T COG3320 156 ---------PTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGA-------LNTRDFLTRLVLGL 219 (382)
T ss_pred ---------ccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCc-------cccchHHHHHHHHH
Confidence 00111234459999999999999999988899999999999999877542 23344555555443
Q ss_pred eee-EecCCCcccCcchHHHHHHHHHHHhhhcc----CC---CCCCCcEEE-eeCCCCCceeHHHHHHHHHH
Q psy7539 241 IRT-MYCDYSTCADFLPVDVLVNGVLLSTWNFL----SN---PGNTMRVIN-LTANKDFQITWYDIIENGKD 303 (318)
Q Consensus 241 ~~~-~~~~~~~~~~~v~v~Dva~~~~~~~~~~~----~~---~~~~~~~~n-i~~~~~~~~~~~el~~~i~~ 303 (318)
... ...+..-..++++++.+++++........ .- +......|+ ..-+ ..+.+.++++.+.+
T Consensus 220 ~~lg~~P~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~--~~i~l~~~~~w~~~ 289 (382)
T COG3320 220 LQLGIAPDSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHP--DEIGLDEYVDWLIS 289 (382)
T ss_pred HHhCCCCCcccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCC--CccchhHHHHhHhh
Confidence 332 12244566777777666665554443322 00 000123344 2224 57899999998877
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-28 Score=220.11 Aligned_cols=240 Identities=16% Similarity=0.132 Sum_probs=178.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++++++.++.........+.. .....+++++.+|++++ +.+..++
T Consensus 15 ~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 70 (355)
T PRK10217 15 SALVRYIINE--TSDAVVVVDKLTYAGNLMSLAP----------------VAQSERFAFEKVDICDR------AELARVF 70 (355)
T ss_pred HHHHHHHHHc--CCCEEEEEecCccccchhhhhh----------------cccCCceEEEECCCcCh------HHHHHHH
Confidence 4789999998 8765544443221111111110 00123688899999987 5777777
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhc--------CCCccEEEEeccccccCC----ccccc
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQM--------IHLQLFVYVSTAYCHPKE----KVLEE 143 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~~~~~~v~~SS~~~~~~~----~~~~E 143 (318)
+ ++|+|||+||..... .....++++|+.||.+++++|.+. +++++|||+||..+|+.. .+++|
T Consensus 71 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E 150 (355)
T PRK10217 71 TEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE 150 (355)
T ss_pred hhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence 7 499999999986433 234679999999999999999862 256899999998887742 24666
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCc
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
+.+..|. +.|+.||.++|.++..+.+ .+++++++||+++||+...+.
T Consensus 151 ~~~~~p~-----------------------------s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~--- 198 (355)
T PRK10217 151 TTPYAPS-----------------------------SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE--- 198 (355)
T ss_pred CCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc---
Confidence 5444443 8899999999999999876 799999999999999754211
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHH
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGK 302 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~ 302 (318)
. ....++.....+....+++++++.++|+||+|+|++++.++..... +++||++++ .+++++|+++.+.
T Consensus 199 --~--~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~~-----~~~yni~~~--~~~s~~~~~~~i~ 267 (355)
T PRK10217 199 --K--LIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGKV-----GETYNIGGH--NERKNLDVVETIC 267 (355)
T ss_pred --c--HHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCCC-----CCeEEeCCC--CcccHHHHHHHHH
Confidence 1 1234555566665556678999999999999999999999987543 689999999 8999999999999
Q ss_pred Hhhcc
Q psy7539 303 DIARN 307 (318)
Q Consensus 303 ~~~~~ 307 (318)
+.+|.
T Consensus 268 ~~~~~ 272 (355)
T PRK10217 268 ELLEE 272 (355)
T ss_pred HHhcc
Confidence 98853
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=217.36 Aligned_cols=251 Identities=15% Similarity=0.107 Sum_probs=177.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ .+++|+++.|+... +... ....+++++.+|++++. +.+..++
T Consensus 15 s~l~~~L~~~-~~~~V~~~~r~~~~------~~~~----------------~~~~~~~~~~~Dl~~~~-----~~~~~~~ 66 (347)
T PRK11908 15 HHLSKRILET-TDWEVYGMDMQTDR------LGDL----------------VNHPRMHFFEGDITINK-----EWIEYHV 66 (347)
T ss_pred HHHHHHHHhC-CCCeEEEEeCcHHH------HHHh----------------ccCCCeEEEeCCCCCCH-----HHHHHHH
Confidence 3789999976 46899999985321 1100 01246899999997321 4566778
Q ss_pred cCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~ 155 (318)
+++|+|||+||.... .......+++|+.|+.+++++|++. + ++|||+||..+|+... +++|+..+....+
T Consensus 67 ~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~--- 141 (347)
T PRK11908 67 KKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGP--- 141 (347)
T ss_pred cCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeeccCCCcCcCccccccccCc---
Confidence 899999999997532 2334567899999999999999985 5 7999999998887532 3444332110000
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc-hHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING-PTGLL 233 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~-~~~~~ 233 (318)
..++.+.|+.||.++|+++..+.. ++++++++||+++||+...+...-..+... ...++
T Consensus 142 -------------------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~ 202 (347)
T PRK11908 142 -------------------INKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFL 202 (347)
T ss_pred -------------------CCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHH
Confidence 001127899999999999999877 799999999999999765432100001111 12455
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
..+..+....+.+++.+.++|+||+|+|++++.++.++... ..+++||++++. ..+|++|+++.+.+.+|
T Consensus 203 ~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~--~~g~~yni~~~~-~~~s~~e~~~~i~~~~~ 272 (347)
T PRK11908 203 GHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGV--ASGKIYNIGNPK-NNHSVRELANKMLELAA 272 (347)
T ss_pred HHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCcccc--CCCCeEEeCCCC-CCcCHHHHHHHHHHHhc
Confidence 56666665566778899999999999999999999875310 136899999850 36999999999999885
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-27 Score=218.93 Aligned_cols=270 Identities=14% Similarity=0.058 Sum_probs=178.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+++ .+++|+++.|..... +.+..... .....+++++.+|+.+. +.+..++
T Consensus 28 s~lv~~L~~~-~g~~V~~l~r~~~~~---~~l~~~~~-------------~~~~~~~~~~~~Dl~d~------~~l~~~~ 84 (386)
T PLN02427 28 SHLCEKLMTE-TPHKVLALDVYNDKI---KHLLEPDT-------------VPWSGRIQFHRINIKHD------SRLEGLI 84 (386)
T ss_pred HHHHHHHHhc-CCCEEEEEecCchhh---hhhhcccc-------------ccCCCCeEEEEcCCCCh------HHHHHHh
Confidence 4799999987 347999998853221 11110000 11224799999999986 5788888
Q ss_pred cCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~ 155 (318)
+++|+|||+||..... ....+.+..|+.++.+++++|++. + ++|||+||.++|+... .++|+.+..+.+....
T Consensus 85 ~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~ 162 (386)
T PLN02427 85 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYV 162 (386)
T ss_pred hcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeeeCCCcCCCCCccccccccccccc
Confidence 8999999999975422 223356678999999999999984 5 8999999998887532 3334322111000000
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCc---ccCCCch-H
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGW---TDNINGP-T 230 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~---~~~~~~~-~ 230 (318)
. +++. ......+.....+.|+.||+++|+++..+.+ .+++++++||++|||+.....++. ...+... .
T Consensus 163 --~----~e~~-~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~ 235 (386)
T PLN02427 163 --L----KEDE-SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 235 (386)
T ss_pred --c----cccc-cccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHH
Confidence 0 0000 0000000001126899999999999998876 799999999999999864322210 0001111 1
Q ss_pred HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 231 GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
.++..+..+....+.+++.+.++|+||+|+|++++.++++.... .+++||++++. .++++.|+++.+++.+|
T Consensus 236 ~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~---~g~~yni~~~~-~~~s~~el~~~i~~~~g 307 (386)
T PLN02427 236 CFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARA---NGHIFNVGNPN-NEVTVRQLAEMMTEVYA 307 (386)
T ss_pred HHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccc---cCceEEeCCCC-CCccHHHHHHHHHHHhc
Confidence 23445556655566778889999999999999999999875311 26799999850 38999999999999885
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=217.81 Aligned_cols=239 Identities=20% Similarity=0.176 Sum_probs=177.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|..+... ......++++.+|+.+. +.+..++
T Consensus 35 ~~l~~~L~~~--G~~V~~v~r~~~~~~-----------------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 83 (370)
T PLN02695 35 SHIARRLKAE--GHYIIASDWKKNEHM-----------------------SEDMFCHEFHLVDLRVM------ENCLKVT 83 (370)
T ss_pred HHHHHHHHhC--CCEEEEEEecccccc-----------------------ccccccceEEECCCCCH------HHHHHHH
Confidence 4789999998 999999999643110 11111357889999876 5677777
Q ss_pred cCccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc------ccccccCCCCC
Q psy7539 81 ETIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK------VLEEKTYPPPV 150 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~------~~~E~~~~~p~ 150 (318)
+++|+|||+||.... .......+..|+.++.+|+++|++. ++++|||+||..+|+... ++.|+.. .|.
T Consensus 84 ~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~-~p~ 161 (370)
T PLN02695 84 KGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIYPEFKQLETNVSLKESDA-WPA 161 (370)
T ss_pred hCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhcCCccccCcCCCcCcccC-CCC
Confidence 899999999987531 1223456778999999999999985 899999999988887532 1333221 111
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccC-CCc
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDN-ING 228 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~-~~~ 228 (318)
.+ .+.|+.+|.++|+++..+.. .|++++++||+++||+.... ..+ ...
T Consensus 162 ~p--------------------------~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~----~~~~~~~ 211 (370)
T PLN02695 162 EP--------------------------QDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTW----KGGREKA 211 (370)
T ss_pred CC--------------------------CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCc----ccccccc
Confidence 11 18999999999999999877 79999999999999975321 111 112
Q ss_pred hHHHHHHHhc-CceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcc
Q psy7539 229 PTGLLIGAGK-GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARN 307 (318)
Q Consensus 229 ~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~ 307 (318)
+..++..+.. +....+++++.+.++|+|++|++++++.++.... .+.||++++ .+++++|+++.+.+..|.
T Consensus 212 ~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~~------~~~~nv~~~--~~~s~~el~~~i~~~~g~ 283 (370)
T PLN02695 212 PAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSDF------REPVNIGSD--EMVSMNEMAEIALSFENK 283 (370)
T ss_pred HHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhccC------CCceEecCC--CceeHHHHHHHHHHHhCC
Confidence 3456665554 3444567899999999999999999999876542 578999999 899999999999998865
Q ss_pred cCC
Q psy7539 308 KVP 310 (318)
Q Consensus 308 ~~p 310 (318)
+.|
T Consensus 284 ~~~ 286 (370)
T PLN02695 284 KLP 286 (370)
T ss_pred CCC
Confidence 444
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=213.49 Aligned_cols=242 Identities=17% Similarity=0.210 Sum_probs=174.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+++ |++|++++|+..... ++.+.... .....+++++.+|++++ +.+..++
T Consensus 19 ~~l~~~L~~~--g~~V~~~~r~~~~~~---~~~~~~~~------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 75 (322)
T PLN02986 19 SWIVKLLLLR--GYTVKATVRDLTDRK---KTEHLLAL------------DGAKERLKLFKADLLEE------SSFEQAI 75 (322)
T ss_pred HHHHHHHHHC--CCEEEEEECCCcchH---HHHHHHhc------------cCCCCceEEEecCCCCc------chHHHHH
Confidence 4789999998 999999999754322 22211110 11124789999999987 5788888
Q ss_pred cCccEEEEcccccCc--chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccc--cCC-----cccccccCCCCCC
Q psy7539 81 ETIHIVYHIAATVRF--DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCH--PKE-----KVLEEKTYPPPVS 151 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~--~~~-----~~~~E~~~~~p~~ 151 (318)
+++|+|||+||.... ..+....+++|+.|+.+++++|++.+++++|||+||..++ +.. ..++|+....|..
T Consensus 76 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~ 155 (322)
T PLN02986 76 EGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSL 155 (322)
T ss_pred hCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHH
Confidence 999999999997533 2333457899999999999999974468999999997654 221 1244433322210
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPT 230 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~ 230 (318)
.....+.|+.||.++|++++.+.+ ++++++++||+++||+...+.. + ...
T Consensus 156 -----------------------~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~----~--~~~ 206 (322)
T PLN02986 156 -----------------------CRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTL----N--FSV 206 (322)
T ss_pred -----------------------hhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCC----C--ccH
Confidence 001127899999999999999987 7999999999999997644321 1 112
Q ss_pred HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 231 GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
.++..+..+.. .. +.+.++||||+|+|++++.++.++.. ++.||++++ ++++.|+++.+++.++
T Consensus 207 ~~~~~~~~g~~--~~--~~~~~~~v~v~Dva~a~~~al~~~~~-----~~~yni~~~---~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 207 ELIVDFINGKN--LF--NNRFYRFVDVRDVALAHIKALETPSA-----NGRYIIDGP---IMSVNDIIDILRELFP 270 (322)
T ss_pred HHHHHHHcCCC--CC--CCcCcceeEHHHHHHHHHHHhcCccc-----CCcEEEecC---CCCHHHHHHHHHHHCC
Confidence 45555555542 12 35678999999999999999988654 458999644 7999999999999983
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-27 Score=213.97 Aligned_cols=238 Identities=16% Similarity=0.145 Sum_probs=171.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+.... ..+..+ .....+++++.+|++++ +.+..++
T Consensus 24 ~~l~~~L~~~--G~~V~~~~r~~~~~~~-~~~~~~---------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 79 (342)
T PLN02214 24 SWIVKILLER--GYTVKGTVRNPDDPKN-THLREL---------------EGGKERLILCKADLQDY------EALKAAI 79 (342)
T ss_pred HHHHHHHHHC--cCEEEEEeCCchhhhH-HHHHHh---------------hCCCCcEEEEecCcCCh------HHHHHHH
Confidence 4789999998 9999999996432111 111111 11123688999999987 5788888
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecc-ccccCCc-----ccccccCCCCCChhH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA-YCHPKEK-----VLEEKTYPPPVSPHN 154 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~-~~~~~~~-----~~~E~~~~~p~~~~~ 154 (318)
+++|+|||+||... ......+++|+.||.+++++|++. ++++|||+||. .+|+... .++|+.......
T Consensus 80 ~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~--- 153 (342)
T PLN02214 80 DGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDF--- 153 (342)
T ss_pred hcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeeccCCCCCCcccCcccCCChhh---
Confidence 99999999999753 345678999999999999999985 88999999996 4665321 245543211000
Q ss_pred HHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 155 VIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
..+..+.|+.||+++|++++.+.+ +|++++++||++|||+...+. .......+
T Consensus 154 --------------------~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~------~~~~~~~~ 207 (342)
T PLN02214 154 --------------------CKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPT------INASLYHV 207 (342)
T ss_pred --------------------ccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC------CCchHHHH
Confidence 001127899999999999999877 799999999999999764321 11111222
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
.....+.... .+++.++||||+|+|++++.+++++.. ++.||+++. ..+++|+++.+++.+
T Consensus 208 ~~~~~g~~~~---~~~~~~~~i~V~Dva~a~~~al~~~~~-----~g~yn~~~~---~~~~~el~~~i~~~~ 268 (342)
T PLN02214 208 LKYLTGSAKT---YANLTQAYVDVRDVALAHVLVYEAPSA-----SGRYLLAES---ARHRGEVVEILAKLF 268 (342)
T ss_pred HHHHcCCccc---CCCCCcCeeEHHHHHHHHHHHHhCccc-----CCcEEEecC---CCCHHHHHHHHHHHC
Confidence 3344444322 245689999999999999999987654 568999876 689999999999988
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-27 Score=219.35 Aligned_cols=254 Identities=15% Similarity=0.068 Sum_probs=177.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC-CH-------------HHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCC
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK-NS-------------RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 66 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~-~~-------------~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~ 66 (318)
+||+++|+++ |++|+++.|..... .. .+++.... .....+++++.+|+++
T Consensus 61 s~Lv~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------------~~~~~~v~~v~~Dl~d 124 (442)
T PLN02572 61 WATALHLSKR--GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWK--------------EVSGKEIELYVGDICD 124 (442)
T ss_pred HHHHHHHHHC--CCeEEEEeccccccccccccccccccccchHHHHHHHH--------------HhhCCcceEEECCCCC
Confidence 4899999998 99999986532110 00 11111110 0112368999999998
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcccccCcc----h--hHHHHHHHhHHHHHHHHHHHHhcCCCc-cEEEEeccccccC
Q psy7539 67 PDLGISAEDRQMLSE--TIHIVYHIAATVRFD----D--YMQTYVFLNTRGTRDMLNLSKQMIHLQ-LFVYVSTAYCHPK 137 (318)
Q Consensus 67 ~~~gl~~~~~~~~~~--~~d~Vih~Aa~~~~~----~--~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~v~~SS~~~~~~ 137 (318)
+ +.+..+++ ++|+|||+|+..... . .....+++|+.||.+++++|++. +++ +||++||..+||.
T Consensus 125 ~------~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-gv~~~~V~~SS~~vYG~ 197 (442)
T PLN02572 125 F------EFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-APDCHLVKLGTMGEYGT 197 (442)
T ss_pred H------HHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-CCCccEEEEecceecCC
Confidence 6 57777777 589999999874322 1 12345789999999999999986 775 8999999998875
Q ss_pred Cc-ccccccC-----------CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEE
Q psy7539 138 EK-VLEEKTY-----------PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCM 204 (318)
Q Consensus 138 ~~-~~~E~~~-----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ 204 (318)
.. +++|... +.|.. +.+.|+.||.++|.++..+.+ +|++++
T Consensus 198 ~~~~~~E~~i~~~~~~~e~~~~~~~~--------------------------P~s~Yg~SK~a~E~l~~~~~~~~gl~~v 251 (442)
T PLN02572 198 PNIDIEEGYITITHNGRTDTLPYPKQ--------------------------ASSFYHLSKVHDSHNIAFTCKAWGIRAT 251 (442)
T ss_pred CCCCCcccccccccccccccccCCCC--------------------------CCCcchhHHHHHHHHHHHHHHhcCCCEE
Confidence 32 3333211 11111 128999999999999999887 799999
Q ss_pred EecccccccccCCCC---CCcc-----cCC--CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCC
Q psy7539 205 ILRPSIIIPIWKDPL---PGWT-----DNI--NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSN 274 (318)
Q Consensus 205 ilR~~~v~G~~~~~~---~g~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~ 274 (318)
++||+++||+...+. +... ++. .....++.....|....++++|.+.++|+||+|+|++++.++++....
T Consensus 252 ~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~ 331 (442)
T PLN02572 252 DLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKP 331 (442)
T ss_pred EEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhc
Confidence 999999999865431 0000 000 112345566666765567789999999999999999999999864321
Q ss_pred CCCCCcEEEeeCCCCCceeHHHHHHHHHHh---hccc
Q psy7539 275 PGNTMRVINLTANKDFQITWYDIIENGKDI---ARNK 308 (318)
Q Consensus 275 ~~~~~~~~ni~~~~~~~~~~~el~~~i~~~---~~~~ 308 (318)
....+||+++. .++++|+++.+++. +|.+
T Consensus 332 --g~~~i~Nigs~---~~si~el~~~i~~~~~~~g~~ 363 (442)
T PLN02572 332 --GEFRVFNQFTE---QFSVNELAKLVTKAGEKLGLD 363 (442)
T ss_pred --CceeEEEeCCC---ceeHHHHHHHHHHHHHhhCCC
Confidence 01258999765 69999999999998 6543
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-27 Score=216.93 Aligned_cols=264 Identities=22% Similarity=0.265 Sum_probs=189.4
Q ss_pred ChhHHHHHhhCCC--cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH
Q psy7539 1 KVLLEKILRTCEN--VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~--~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~ 78 (318)
++|+++|+++ + .+|+|++|+.+.....+++.+.+........ ....++++++.||++++.+||+.+.+..
T Consensus 13 ~~l~~~L~~~--g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~v~~~~~D~~~~~~gl~~~~~~~ 84 (367)
T TIGR01746 13 AYLLEELLRR--STQAKVICLVRAASEEHAMERLREALRSYRLWQE------DLARERIEVVAGDLSEPRLGLSDAEWER 84 (367)
T ss_pred HHHHHHHHhC--CCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCc------hhhhCCEEEEeCCcCcccCCcCHHHHHH
Confidence 4789999988 5 6899999986655556666655432110000 0011589999999999999999999999
Q ss_pred HhcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHHH
Q psy7539 79 LSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNVI 156 (318)
Q Consensus 79 ~~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~~ 156 (318)
+.+++|+|||+||.+.+..++..+.+.|+.|+.+++++|.+. ++++|||+||.++++... ...|.....+.
T Consensus 85 ~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~------ 157 (367)
T TIGR01746 85 LAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLSTVTEDDAIVTP------ 157 (367)
T ss_pred HHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCCCcccccccccc------
Confidence 889999999999998877778888999999999999999985 788899999998876532 11221111100
Q ss_pred HHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 157 EKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
.....++|+.||+++|.++..+.+.|++++++||+.++|....+. .....++..+
T Consensus 158 ------------------~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~-------~~~~~~~~~~ 212 (367)
T TIGR01746 158 ------------------PPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGA-------INSSDILWRM 212 (367)
T ss_pred ------------------ccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCC-------CCchhHHHHH
Confidence 001127899999999999988766689999999999999744321 1222333332
Q ss_pred hcCce--eeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 237 GKGII--RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 237 ~~~~~--~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
..+.. ...+.......+|+|++|++++++.++...... ..+++||++++ .++++.|+++.+.+ .|.+.
T Consensus 213 ~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~--~~~~~~~v~~~--~~~s~~e~~~~i~~-~g~~~ 282 (367)
T TIGR01746 213 VKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAAS--AGGPVFHVVNP--EPVSLDEFLEWLER-AGYNL 282 (367)
T ss_pred HHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcc--cCCceEEecCC--CCCCHHHHHHHHHH-cCCCC
Confidence 22111 122222234678999999999999998765420 02679999998 89999999999998 65554
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-27 Score=231.04 Aligned_cols=242 Identities=19% Similarity=0.160 Sum_probs=181.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|++++.+++|+++.|....... ..+.. .....+++++.+|++++ +.+..++
T Consensus 20 ~~lv~~Ll~~g~~~~V~~~d~~~~~~~~-~~l~~----------------~~~~~~v~~~~~Dl~d~------~~~~~~~ 76 (668)
T PLN02260 20 SHVANRLIRNYPDYKIVVLDKLDYCSNL-KNLNP----------------SKSSPNFKFVKGDIASA------DLVNYLL 76 (668)
T ss_pred HHHHHHHHHhCCCCEEEEEeCCCccchh-hhhhh----------------cccCCCeEEEECCCCCh------HHHHHHH
Confidence 4799999987456899999885311111 11110 11234789999999986 3555544
Q ss_pred --cCccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcc-----cccccCCCCC
Q psy7539 81 --ETIHIVYHIAATVRFDD---YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKV-----LEEKTYPPPV 150 (318)
Q Consensus 81 --~~~d~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~-----~~E~~~~~p~ 150 (318)
.++|+|||+||...... ...+++++|+.||.+|+++|++.+.+++|||+||..+|+.... .+|+.+..|.
T Consensus 77 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~ 156 (668)
T PLN02260 77 ITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPT 156 (668)
T ss_pred hhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCC
Confidence 58999999999865432 3347889999999999999998644899999999988876321 1233222222
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCch
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGP 229 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~ 229 (318)
+.|+.||.++|+++..+.+ ++++++++||++|||+...+. . -.
T Consensus 157 -----------------------------~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-----~--~i 200 (668)
T PLN02260 157 -----------------------------NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-----K--LI 200 (668)
T ss_pred -----------------------------CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-----c--HH
Confidence 8999999999999999877 799999999999999754211 1 11
Q ss_pred HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 230 TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
..++.....+....+++++.+.++|+||+|+|+++..++++... +++||++++ +++++.|+++.+++.+|.+
T Consensus 201 ~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~~-----~~vyni~~~--~~~s~~el~~~i~~~~g~~ 272 (668)
T PLN02260 201 PKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEV-----GHVYNIGTK--KERRVIDVAKDICKLFGLD 272 (668)
T ss_pred HHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCCC-----CCEEEECCC--CeeEHHHHHHHHHHHhCCC
Confidence 23455556665556778899999999999999999999876543 689999998 8999999999999999754
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=220.09 Aligned_cols=236 Identities=19% Similarity=0.146 Sum_probs=177.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|..... .+.+... ....+++++.+|+.+.. +
T Consensus 134 s~Lv~~Ll~~--G~~V~~ldr~~~~~--~~~~~~~----------------~~~~~~~~~~~Di~~~~-----------~ 182 (436)
T PLN02166 134 SHLVDKLIGR--GDEVIVIDNFFTGR--KENLVHL----------------FGNPRFELIRHDVVEPI-----------L 182 (436)
T ss_pred HHHHHHHHHC--CCEEEEEeCCCCcc--HhHhhhh----------------ccCCceEEEECcccccc-----------c
Confidence 4799999998 99999999863221 1111110 01236788999987641 3
Q ss_pred cCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCC--CCCChh
Q psy7539 81 ETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYP--PPVSPH 153 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~--~p~~~~ 153 (318)
.++|+|||+|+.... ..+..+++++|+.||.+|+++|++. ++ +|||+||.++|+... +.+|+... .|..+
T Consensus 183 ~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p- 259 (436)
T PLN02166 183 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE- 259 (436)
T ss_pred cCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhCCCCCCCCCccccccCCCCCC-
Confidence 579999999997532 2345678999999999999999985 54 899999999988632 55564321 12211
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
.+.|+.+|+++|+++..+.+ .+++++++|++++||+...... + .-...+
T Consensus 260 -------------------------~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~----~-~~i~~~ 309 (436)
T PLN02166 260 -------------------------RSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDD----G-RVVSNF 309 (436)
T ss_pred -------------------------CCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCc----c-chHHHH
Confidence 17899999999999999987 7899999999999997542110 0 112356
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
+..+.++....+++++.+.++|+||+|+|+++..+++... .++||++++ ..+|++|+++.+++.+|.+
T Consensus 310 i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~------~giyNIgs~--~~~Si~ela~~I~~~~g~~ 377 (436)
T PLN02166 310 VAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH------VGPFNLGNP--GEFTMLELAEVVKETIDSS 377 (436)
T ss_pred HHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC------CceEEeCCC--CcEeHHHHHHHHHHHhCCC
Confidence 7777777666677899999999999999999999987532 469999998 8999999999999998654
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-27 Score=210.67 Aligned_cols=242 Identities=13% Similarity=0.152 Sum_probs=172.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.......+.+... ....++++++.+|+.++ +.+..++
T Consensus 18 ~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 74 (322)
T PLN02662 18 SWLVKLLLQR--GYTVKATVRDPNDPKKTEHLLAL---------------DGAKERLHLFKANLLEE------GSFDSVV 74 (322)
T ss_pred HHHHHHHHHC--CCEEEEEEcCCCchhhHHHHHhc---------------cCCCCceEEEeccccCc------chHHHHH
Confidence 4789999998 99999999974332111111100 11124789999999987 4788889
Q ss_pred cCccEEEEcccccCc--chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecccc--ccCC-----cccccccCCCCCC
Q psy7539 81 ETIHIVYHIAATVRF--DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYC--HPKE-----KVLEEKTYPPPVS 151 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~--~~~~-----~~~~E~~~~~p~~ 151 (318)
+++|+|||+||.... ..+...++++|+.|+.+++++|.+..++++|||+||.++ |+.. .+++|+.+..|..
T Consensus 75 ~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~ 154 (322)
T PLN02662 75 DGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAF 154 (322)
T ss_pred cCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhH
Confidence 999999999997532 223347889999999999999987447899999999753 4321 1345543322210
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPT 230 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~ 230 (318)
.. ...+.|+.+|.++|++++.+.+ ++++++++||+++||+...+.. ....
T Consensus 155 ~~-----------------------~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~------~~~~ 205 (322)
T PLN02662 155 CE-----------------------ESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTL------NTSA 205 (322)
T ss_pred hh-----------------------cccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCC------CchH
Confidence 00 0116899999999999998877 7999999999999997543211 1122
Q ss_pred HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 231 GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
.++..+..+.. ..+.+.++|+||+|+|++++.+++++.. .+.||+++. +++++|+++.+.+.++
T Consensus 206 ~~~~~~~~~~~----~~~~~~~~~i~v~Dva~a~~~~~~~~~~-----~~~~~~~g~---~~s~~e~~~~i~~~~~ 269 (322)
T PLN02662 206 EAILNLINGAQ----TFPNASYRWVDVRDVANAHIQAFEIPSA-----SGRYCLVER---VVHYSEVVKILHELYP 269 (322)
T ss_pred HHHHHHhcCCc----cCCCCCcCeEEHHHHHHHHHHHhcCcCc-----CCcEEEeCC---CCCHHHHHHHHHHHCC
Confidence 34444554432 1245789999999999999999987654 457888744 7999999999999873
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-27 Score=212.68 Aligned_cols=247 Identities=15% Similarity=0.095 Sum_probs=180.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|...... .+++...... .. .....+++++.+|+++. +.+..++
T Consensus 14 ~~l~~~L~~~--G~~V~~~~r~~~~~~-~~~~~~~~~~-----~~-----~~~~~~~~~~~~Dl~d~------~~l~~~~ 74 (343)
T TIGR01472 14 SYLAEFLLEK--GYEVHGLIRRSSSFN-TQRIEHIYED-----PH-----NVNKARMKLHYGDLTDS------SNLRRII 74 (343)
T ss_pred HHHHHHHHHC--CCEEEEEecCCcccc-hhhhhhhhhc-----cc-----cccccceeEEEeccCCH------HHHHHHH
Confidence 4789999998 999999999754211 1222221100 00 01124689999999986 5788877
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCC---ccEEEEeccccccCCc--ccccccCCCCC
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHL---QLFVYVSTAYCHPKEK--VLEEKTYPPPV 150 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~---~~~v~~SS~~~~~~~~--~~~E~~~~~p~ 150 (318)
+ ++|+|||+||..... .......++|+.||.+++++|++. ++ ++|||+||..+|+... +.+|+.+..|.
T Consensus 75 ~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~ 153 (343)
T TIGR01472 75 DEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSELYGKVQEIPQNETTPFYPR 153 (343)
T ss_pred HhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCC
Confidence 7 479999999985432 223456788999999999999985 54 3899999998887532 56665544443
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCC-c
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNIN-G 228 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~-~ 228 (318)
+.|+.||.++|.++..+.+ .++++++.|+.++||+.... . .+. .
T Consensus 154 -----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~---~~~~~ 199 (343)
T TIGR01472 154 -----------------------------SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGE--N---FVTRK 199 (343)
T ss_pred -----------------------------ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCc--c---ccchH
Confidence 8999999999999999877 78999999999998864211 0 011 1
Q ss_pred hHHHHHHHhcCce-eeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcc
Q psy7539 229 PTGLLIGAGKGII-RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARN 307 (318)
Q Consensus 229 ~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~ 307 (318)
...++..+..+.. ....+++++.++|+||+|+|++++.++++.. .+.||++++ .++|++|+++.+.+.+|.
T Consensus 200 ~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~------~~~yni~~g--~~~s~~e~~~~i~~~~g~ 271 (343)
T TIGR01472 200 ITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK------PDDYVIATG--ETHSVREFVEVSFEYIGK 271 (343)
T ss_pred HHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC------CccEEecCC--CceeHHHHHHHHHHHcCC
Confidence 1234445555542 3456889999999999999999999997643 358999999 899999999999999975
Q ss_pred cC
Q psy7539 308 KV 309 (318)
Q Consensus 308 ~~ 309 (318)
+.
T Consensus 272 ~~ 273 (343)
T TIGR01472 272 TL 273 (343)
T ss_pred Cc
Confidence 43
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=200.17 Aligned_cols=209 Identities=20% Similarity=0.148 Sum_probs=170.9
Q ss_pred hccceEEEeccCCCCCCCCCHHHHHHHhc--CccEEEEcccccCcchh---HHHHHHHhHHHHHHHHHHHHhcCCCccEE
Q psy7539 53 IFEKVIPINGDVAVPDLGISAEDRQMLSE--TIHIVYHIAATVRFDDY---MQTYVFLNTRGTRDMLNLSKQMIHLQLFV 127 (318)
Q Consensus 53 ~~~~i~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~Aa~~~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v 127 (318)
..++..|+.+|+.+.. ....++. .+|.|+|.||..+.... .-++...|+.+|..|+++++..+++++||
T Consensus 55 n~p~ykfv~~di~~~~------~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fv 128 (331)
T KOG0747|consen 55 NSPNYKFVEGDIADAD------LVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFV 128 (331)
T ss_pred cCCCceEeeccccchH------HHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEE
Confidence 4568899999998752 3444443 79999999998754432 23678889999999999999988999999
Q ss_pred EEeccccccCCc--ccc-cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcE
Q psy7539 128 YVSTAYCHPKEK--VLE-EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPC 203 (318)
Q Consensus 128 ~~SS~~~~~~~~--~~~-E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~ 203 (318)
|+||..|||..+ ... |.+.+.|. ++|++||+++|.+++++.. +|+++
T Consensus 129 hvSTdeVYGds~~~~~~~E~s~~nPt-----------------------------npyAasKaAaE~~v~Sy~~sy~lpv 179 (331)
T KOG0747|consen 129 HVSTDEVYGDSDEDAVVGEASLLNPT-----------------------------NPYAASKAAAEMLVRSYGRSYGLPV 179 (331)
T ss_pred EecccceecCccccccccccccCCCC-----------------------------CchHHHHHHHHHHHHHHhhccCCcE
Confidence 999999998854 333 76666666 9999999999999999998 99999
Q ss_pred EEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEE
Q psy7539 204 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 283 (318)
Q Consensus 204 ~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~n 283 (318)
+++|.++|||+.+.+. .-.-.|+....++..-.+.++|.+.++|+||+|+++++.++++++.. +++||
T Consensus 180 v~~R~nnVYGP~q~~~-------klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~-----geIYN 247 (331)
T KOG0747|consen 180 VTTRMNNVYGPNQYPE-------KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGEL-----GEIYN 247 (331)
T ss_pred EEEeccCccCCCcChH-------HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCc-----cceee
Confidence 9999999999765432 11123555555666668899999999999999999999999999664 89999
Q ss_pred eeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 284 LTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 284 i~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
|+++ .+.+..|+++.+.+.++...|
T Consensus 248 Igtd--~e~~~~~l~k~i~eli~~~~~ 272 (331)
T KOG0747|consen 248 IGTD--DEMRVIDLAKDICELFEKRLP 272 (331)
T ss_pred ccCc--chhhHHHHHHHHHHHHHHhcc
Confidence 9999 899999999999998866443
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-27 Score=228.19 Aligned_cols=251 Identities=16% Similarity=0.097 Sum_probs=181.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+++ .+++|++++|...... + ....++++++.||++++. +.+..++
T Consensus 329 s~Lv~~Ll~~-~g~~V~~l~r~~~~~~---~-------------------~~~~~~~~~~~gDl~d~~-----~~l~~~l 380 (660)
T PRK08125 329 NHLTERLLRD-DNYEVYGLDIGSDAIS---R-------------------FLGHPRFHFVEGDISIHS-----EWIEYHI 380 (660)
T ss_pred HHHHHHHHhC-CCcEEEEEeCCchhhh---h-------------------hcCCCceEEEeccccCcH-----HHHHHHh
Confidence 4789999985 3689999999643210 0 011247899999998752 2356677
Q ss_pred cCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC--cccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~--~~~~E~~~~~p~~~~~~ 155 (318)
+++|+|||+||.... ......++++|+.+|.+++++|++. + ++|||+||.++|+.. .+++|+....+..+.
T Consensus 381 ~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~-- 456 (660)
T PRK08125 381 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPI-- 456 (660)
T ss_pred cCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcchhhcCCCCCCCcCccccccccCCC--
Confidence 899999999997543 2334568899999999999999985 5 899999999888753 256665432111000
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc-hHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING-PTGLL 233 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~-~~~~~ 233 (318)
..+.+.|+.||+++|+++..+.+ ++++++++||+++||+..........+..+ ...++
T Consensus 457 --------------------~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i 516 (660)
T PRK08125 457 --------------------NKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLI 516 (660)
T ss_pred --------------------CCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHH
Confidence 00116899999999999999887 799999999999999764321100000001 23455
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCC-ceeHHHHHHHHHHhhcc
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF-QITWYDIIENGKDIARN 307 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~-~~~~~el~~~i~~~~~~ 307 (318)
..+..+....+++++.+.++|+||+|+|++++.++++.... ..+++||++++ . .++++|+++.+.+.+|.
T Consensus 517 ~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~--~~g~iyni~~~--~~~~s~~el~~~i~~~~g~ 587 (660)
T PRK08125 517 LNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNR--CDGQIINIGNP--DNEASIRELAEMLLASFEK 587 (660)
T ss_pred HHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccc--cCCeEEEcCCC--CCceeHHHHHHHHHHHhcc
Confidence 66666655566788999999999999999999999864310 13679999987 5 69999999999999864
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=208.24 Aligned_cols=242 Identities=14% Similarity=0.168 Sum_probs=173.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+...... ....... .....+++++.+|++++ +.+..++
T Consensus 19 ~~l~~~L~~~--G~~V~~~~r~~~~~~~---~~~~~~~------------~~~~~~~~~~~~D~~d~------~~~~~~~ 75 (325)
T PLN02989 19 SWIVKLLLFR--GYTINATVRDPKDRKK---TDHLLAL------------DGAKERLKLFKADLLDE------GSFELAI 75 (325)
T ss_pred HHHHHHHHHC--CCEEEEEEcCCcchhh---HHHHHhc------------cCCCCceEEEeCCCCCc------hHHHHHH
Confidence 4789999998 9999999887543211 1111000 11124788999999987 5788888
Q ss_pred cCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC-------cccccccCCCCC
Q psy7539 81 ETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE-------KVLEEKTYPPPV 150 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~-------~~~~E~~~~~p~ 150 (318)
+++|+|||+||..... ......+++|+.|+.+++++|.+..++++||++||..+++.. .+++|+.+..|.
T Consensus 76 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~ 155 (325)
T PLN02989 76 DGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPS 155 (325)
T ss_pred cCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchh
Confidence 9999999999975322 334578899999999999999874357899999997665431 135565444332
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCch
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGP 229 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~ 229 (318)
... ...+.|+.||+++|+++..+.+ ++++++++||+++||+...+.. + ..
T Consensus 156 ~~~-----------------------~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~----~--~~ 206 (325)
T PLN02989 156 FAE-----------------------ERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTL----N--FS 206 (325)
T ss_pred Hhc-----------------------ccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCC----C--ch
Confidence 100 0116899999999999999887 7999999999999997654321 1 12
Q ss_pred HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 230 TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
..++..+..+... . +.+.++|+||+|+|++++.+++++.. .+.||++++ +++++|+++.+++.++
T Consensus 207 ~~~i~~~~~~~~~--~--~~~~r~~i~v~Dva~a~~~~l~~~~~-----~~~~ni~~~---~~s~~ei~~~i~~~~~ 271 (325)
T PLN02989 207 VAVIVELMKGKNP--F--NTTHHRFVDVRDVALAHVKALETPSA-----NGRYIIDGP---VVTIKDIENVLREFFP 271 (325)
T ss_pred HHHHHHHHcCCCC--C--CCcCcCeeEHHHHHHHHHHHhcCccc-----CceEEEecC---CCCHHHHHHHHHHHCC
Confidence 2455555555332 1 23568999999999999999987653 468999644 7999999999999984
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=208.25 Aligned_cols=248 Identities=13% Similarity=0.119 Sum_probs=169.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||++.|+++ |++|++++|+.........+..+ .. .++++++.+|++++ +.+..++
T Consensus 23 ~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~---------------~~-~~~~~~~~~Dl~d~------~~~~~~~ 78 (338)
T PLN00198 23 SLLIKLLLQK--GYAVNTTVRDPENQKKIAHLRAL---------------QE-LGDLKIFGADLTDE------ESFEAPI 78 (338)
T ss_pred HHHHHHHHHC--CCEEEEEECCCCCHHHHHHHHhc---------------CC-CCceEEEEcCCCCh------HHHHHHH
Confidence 4799999998 89999999975322111101000 11 13688999999987 5788888
Q ss_pred cCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC------cccccccCCCCCCh
Q psy7539 81 ETIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE------KVLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~------~~~~E~~~~~p~~~ 152 (318)
+++|+|||+||..... .+...++++|+.|+.+++++|.+..++++|||+||..+++.. .+++|+......
T Consensus 79 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~-- 156 (338)
T PLN00198 79 AGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVE-- 156 (338)
T ss_pred hcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchh--
Confidence 8999999999975432 233457899999999999999875458999999998887642 134443211000
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
..+.. ..+.++|+.||+++|++++.+.+ ++++++++||++|||+...+. +.....
T Consensus 157 -------------~~~~~-----~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~------~~~~~~ 212 (338)
T PLN00198 157 -------------FLTSE-----KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSD------IPSSLS 212 (338)
T ss_pred -------------hhhhc-----CCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCC------CCCcHH
Confidence 00000 01127899999999999999887 799999999999999765321 111112
Q ss_pred HHHHHhcCceeeEec-CC----CcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 232 LLIGAGKGIIRTMYC-DY----STCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~-~~----~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
++..+..+....+.+ .+ ++.++|+||+|+|++++.++..... .+.|+ +++ ..+++.++++.+.+.++
T Consensus 213 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~-----~~~~~-~~~--~~~s~~el~~~i~~~~~ 284 (338)
T PLN00198 213 LAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESA-----SGRYI-CCA--ANTSVPELAKFLIKRYP 284 (338)
T ss_pred HHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCc-----CCcEE-Eec--CCCCHHHHHHHHHHHCC
Confidence 334444543322222 22 2347999999999999999987543 34685 444 47899999999998873
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=209.97 Aligned_cols=239 Identities=15% Similarity=0.140 Sum_probs=174.0
Q ss_pred ChhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |. .|+++.|... ....+.+... ....+++++.+|+++. +.+..+
T Consensus 14 ~~l~~~L~~~--g~~~v~~~~~~~~-~~~~~~~~~~----------------~~~~~~~~~~~Dl~d~------~~~~~~ 68 (352)
T PRK10084 14 SAVVRHIINN--TQDSVVNVDKLTY-AGNLESLADV----------------SDSERYVFEHADICDR------AELDRI 68 (352)
T ss_pred HHHHHHHHHh--CCCeEEEecCCCc-cchHHHHHhc----------------ccCCceEEEEecCCCH------HHHHHH
Confidence 3789999998 76 4655554321 1111111110 0123678899999986 577777
Q ss_pred hc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhc--------CCCccEEEEeccccccCCc-------
Q psy7539 80 SE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQM--------IHLQLFVYVSTAYCHPKEK------- 139 (318)
Q Consensus 80 ~~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~~~~~~v~~SS~~~~~~~~------- 139 (318)
++ ++|+|||+||..... .....++++|+.|+.+++++|++. .++++|||+||.++|+...
T Consensus 69 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 148 (352)
T PRK10084 69 FAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVEN 148 (352)
T ss_pred HHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccc
Confidence 75 589999999976432 234678999999999999999863 2467999999988877421
Q ss_pred -----ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEeccccccc
Q psy7539 140 -----VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIP 213 (318)
Q Consensus 140 -----~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G 213 (318)
+++|+.+..|. +.|+.||+++|+++..+++ ++++++++|++++||
T Consensus 149 ~~~~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~G 199 (352)
T PRK10084 149 SEELPLFTETTAYAPS-----------------------------SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYG 199 (352)
T ss_pred cccCCCccccCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeC
Confidence 12333322222 8999999999999999877 799999999999999
Q ss_pred ccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 214 IWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
+...+. + ....++..+..+....+++++++.++|+||+|+|++++.++++... ++.||++++ ++++
T Consensus 200 p~~~~~-----~--~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~~~-----~~~yni~~~--~~~s 265 (352)
T PRK10084 200 PYHFPE-----K--LIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEGKA-----GETYNIGGH--NEKK 265 (352)
T ss_pred CCcCcc-----c--hHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcCCC-----CceEEeCCC--CcCc
Confidence 753210 1 1223445555555456678899999999999999999999876433 689999999 8899
Q ss_pred HHHHHHHHHHhhcc
Q psy7539 294 WYDIIENGKDIARN 307 (318)
Q Consensus 294 ~~el~~~i~~~~~~ 307 (318)
++++++.+++.+|.
T Consensus 266 ~~~~~~~i~~~~~~ 279 (352)
T PRK10084 266 NLDVVLTICDLLDE 279 (352)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998864
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=214.35 Aligned_cols=235 Identities=17% Similarity=0.114 Sum_probs=174.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+++ |++|+++.|..... .+.+... ....+++++.+|+.++ .+
T Consensus 133 s~Lv~~Ll~~--G~~V~~ld~~~~~~--~~~~~~~----------------~~~~~~~~i~~D~~~~-----------~l 181 (442)
T PLN02206 133 SHLVDRLMAR--GDSVIVVDNFFTGR--KENVMHH----------------FSNPNFELIRHDVVEP-----------IL 181 (442)
T ss_pred HHHHHHHHHC--cCEEEEEeCCCccc--hhhhhhh----------------ccCCceEEEECCccCh-----------hh
Confidence 4899999998 99999998753211 1111111 0124688899998764 23
Q ss_pred cCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccC--CCCCChh
Q psy7539 81 ETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTY--PPPVSPH 153 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~--~~p~~~~ 153 (318)
.++|+|||+|+.... ..+...++++|+.||.+|+++|++. ++ +|||+||..+|+... +.+|+.. ..|..+
T Consensus 182 ~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~- 258 (442)
T PLN02206 182 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGV- 258 (442)
T ss_pred cCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHhCCCCCCCCCccccccCCCCCc-
Confidence 579999999997532 2345678999999999999999985 54 899999998887532 4555431 122211
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
.+.|+.+|.++|+++..+.+ .+++++++||+++||+...... + .....+
T Consensus 259 -------------------------~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~----~-~~v~~~ 308 (442)
T PLN02206 259 -------------------------RSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDD----G-RVVSNF 308 (442)
T ss_pred -------------------------cchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccc----c-chHHHH
Confidence 17899999999999998876 7899999999999996532111 0 112346
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcc
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARN 307 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~ 307 (318)
+.....+....+++++.+.++|+||+|+|++++.++++.. .+.||++++ .+++++|+++.+++.+|.
T Consensus 309 i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~------~g~yNIgs~--~~~sl~Elae~i~~~~g~ 375 (442)
T PLN02206 309 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH------VGPFNLGNP--GEFTMLELAKVVQETIDP 375 (442)
T ss_pred HHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC------CceEEEcCC--CceeHHHHHHHHHHHhCC
Confidence 6666666655677899999999999999999999987542 468999998 899999999999999864
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-26 Score=207.56 Aligned_cols=245 Identities=14% Similarity=0.184 Sum_probs=166.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+... .+...... .....+++++.+|++++ +.+..++
T Consensus 19 s~l~~~L~~~--G~~V~~~~r~~~~~~---~~~~~~~~------------~~~~~~~~~v~~Dl~d~------~~~~~~~ 75 (351)
T PLN02650 19 SWLVMRLLER--GYTVRATVRDPANVK---KVKHLLDL------------PGATTRLTLWKADLAVE------GSFDDAI 75 (351)
T ss_pred HHHHHHHHHC--CCEEEEEEcCcchhH---HHHHHHhc------------cCCCCceEEEEecCCCh------hhHHHHH
Confidence 4799999998 999999999643322 11111100 11123688999999987 4788888
Q ss_pred cCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc---c-cccccCCCCCChhH
Q psy7539 81 ETIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK---V-LEEKTYPPPVSPHN 154 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~---~-~~E~~~~~p~~~~~ 154 (318)
+++|+|||+|+..... .+....+++|+.||.+++++|.+...+++|||+||.++++... + .+|..... .+
T Consensus 76 ~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~-~~--- 151 (351)
T PLN02650 76 RGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSD-LD--- 151 (351)
T ss_pred hCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCc-hh---
Confidence 9999999999975432 2234688999999999999999853378999999986654321 2 34432110 00
Q ss_pred HHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 155 VIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
... ......+.|+.||.++|.+++.+.+ +|++++++||+++||+..... . +..++
T Consensus 152 ---------------~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~------~--~~~~~ 207 (351)
T PLN02650 152 ---------------FCR-RKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS------M--PPSLI 207 (351)
T ss_pred ---------------hhh-ccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC------C--CccHH
Confidence 000 0000115899999999999999987 799999999999999764321 1 11122
Q ss_pred HH--HhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 234 IG--AGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 234 ~~--~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
.. ...+... ..+ ..+.++|+||+|+|++++.+++++.. .+.| ++++ .++++.|+++.+++.++
T Consensus 208 ~~~~~~~~~~~-~~~-~~~~r~~v~V~Dva~a~~~~l~~~~~-----~~~~-i~~~--~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 208 TALSLITGNEA-HYS-IIKQGQFVHLDDLCNAHIFLFEHPAA-----EGRY-ICSS--HDATIHDLAKMLREKYP 272 (351)
T ss_pred HHHHHhcCCcc-ccC-cCCCcceeeHHHHHHHHHHHhcCcCc-----CceE-EecC--CCcCHHHHHHHHHHhCc
Confidence 21 1222211 122 23458999999999999999987553 4578 4555 57999999999999873
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=205.75 Aligned_cols=231 Identities=16% Similarity=0.126 Sum_probs=163.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHH-HHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAED-RQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~-~~~~ 79 (318)
+||+++|+++ |++++++.|+...... . ..+..+|+.+.. +.+. +..+
T Consensus 13 ~~l~~~L~~~--g~~~v~~~~~~~~~~~---~------------------------~~~~~~~~~d~~---~~~~~~~~~ 60 (308)
T PRK11150 13 SNIVKALNDK--GITDILVVDNLKDGTK---F------------------------VNLVDLDIADYM---DKEDFLAQI 60 (308)
T ss_pred HHHHHHHHhC--CCceEEEecCCCcchH---H------------------------Hhhhhhhhhhhh---hHHHHHHHH
Confidence 4899999998 8877777775432110 0 011233443320 1122 3333
Q ss_pred hc-----CccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCC
Q psy7539 80 SE-----TIHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVS 151 (318)
Q Consensus 80 ~~-----~~d~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~ 151 (318)
++ ++|+|||+||..... .....+++.|+.+|.+|+++|++. ++ +|||+||.++|+... ..+|..+..|.
T Consensus 61 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~- 137 (308)
T PRK11150 61 MAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTDDFIEEREYEKPL- 137 (308)
T ss_pred hcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCcCCCCCCccCCCCCCC-
Confidence 32 699999999864322 223457899999999999999985 66 699999999988632 45555444443
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCch-
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGP- 229 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~- 229 (318)
+.|+.||+++|++++.+.. .+++++++||+++||+...+. + .+...
T Consensus 138 ----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~-~---~~~~~~ 185 (308)
T PRK11150 138 ----------------------------NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHK-G---SMASVA 185 (308)
T ss_pred ----------------------------CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCC-C---ccchhH
Confidence 8899999999999999876 789999999999999764321 1 11111
Q ss_pred HHHHHHHhcCceeeE-ecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 230 TGLLIGAGKGIIRTM-YCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
..+...+.++....+ .+++...++|+||+|+|++++.++++.. +++||++++ .++++.|+++.+.+..|
T Consensus 186 ~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~------~~~yni~~~--~~~s~~el~~~i~~~~~ 255 (308)
T PRK11150 186 FHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV------SGIFNCGTG--RAESFQAVADAVLAYHK 255 (308)
T ss_pred HHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC------CCeEEcCCC--CceeHHHHHHHHHHHhC
Confidence 123345556644333 3566789999999999999999987642 469999999 88999999999999885
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=201.85 Aligned_cols=241 Identities=19% Similarity=0.169 Sum_probs=178.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|++++++++|+++.|..... ..+++... . ..++++++.+|++++ +++..++
T Consensus 13 ~~l~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~---------------~-~~~~~~~~~~Dl~~~------~~~~~~~ 69 (317)
T TIGR01181 13 SNFVRYILNEHPDAEVIVLDKLTYAG-NLENLADL---------------E-DNPRYRFVKGDIGDR------ELVSRLF 69 (317)
T ss_pred HHHHHHHHHhCCCCEEEEecCCCcch-hhhhhhhh---------------c-cCCCcEEEEcCCcCH------HHHHHHH
Confidence 47899999882237899987743211 11122111 0 124688999999987 5788888
Q ss_pred cC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc---ccccccCCCCCCh
Q psy7539 81 ET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK---VLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~---~~~E~~~~~p~~~ 152 (318)
++ +|+|||+||..... .....++++|+.|+.+++++|.+.....++||+||.++++... +.+|.....|.
T Consensus 70 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~-- 147 (317)
T TIGR01181 70 TEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPS-- 147 (317)
T ss_pred hhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCC--
Confidence 76 99999999976432 2345688999999999999998742223899999988877532 35554433333
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
+.|+.+|+.+|.++..+.. .+++++++||+.+||+...+. . -...
T Consensus 148 ---------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-----~--~~~~ 193 (317)
T TIGR01181 148 ---------------------------SPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-----K--LIPL 193 (317)
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-----c--HHHH
Confidence 7899999999999998876 789999999999999653211 1 1224
Q ss_pred HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcc
Q psy7539 232 LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARN 307 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~ 307 (318)
++.....+....+++++++.++|+|++|+|+++..++++... +++||++++ .+++++|+++.+.+.+|.
T Consensus 194 ~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~-----~~~~~~~~~--~~~s~~~~~~~i~~~~~~ 262 (317)
T TIGR01181 194 MITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRV-----GETYNIGGG--NERTNLEVVETILELLGK 262 (317)
T ss_pred HHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCC-----CceEEeCCC--CceeHHHHHHHHHHHhCC
Confidence 555566665555677889999999999999999999976443 689999998 899999999999999964
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-26 Score=202.42 Aligned_cols=236 Identities=22% Similarity=0.272 Sum_probs=184.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|++. |++|+++.|....... .. ..+.++.+|+.+. +......
T Consensus 14 ~~l~~~L~~~--g~~V~~~~r~~~~~~~-----------------------~~-~~~~~~~~d~~~~------~~~~~~~ 61 (314)
T COG0451 14 SHLVERLLAA--GHDVRGLDRLRDGLDP-----------------------LL-SGVEFVVLDLTDR------DLVDELA 61 (314)
T ss_pred HHHHHHHHhC--CCeEEEEeCCCccccc-----------------------cc-cccceeeecccch------HHHHHHH
Confidence 4799999998 9999999997544321 11 4678899999876 3566667
Q ss_pred cCc-cEEEEcccccCcchh----HHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC--c-cccccc-CCCCCC
Q psy7539 81 ETI-HIVYHIAATVRFDDY----MQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--K-VLEEKT-YPPPVS 151 (318)
Q Consensus 81 ~~~-d~Vih~Aa~~~~~~~----~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~--~-~~~E~~-~~~p~~ 151 (318)
+.+ |+|||+|+....... +..+++.|+.||.+++++|++ .++++|||.||.++++.. . .++|+. +..|.
T Consensus 62 ~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~- 139 (314)
T COG0451 62 KGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL- 139 (314)
T ss_pred hcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeCCCceECCCCCCCCcccccCCCCCC-
Confidence 777 999999998754433 345899999999999999999 599999998887766642 2 566663 33332
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPT 230 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~ 230 (318)
+.|+.||+++|+++..+.. +|++++++||+.+||+...+. + .. ....
T Consensus 140 ----------------------------~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~--~-~~-~~~~ 187 (314)
T COG0451 140 ----------------------------NPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPD--L-SS-GVVS 187 (314)
T ss_pred ----------------------------CHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCC--C-Cc-CcHH
Confidence 6899999999999999987 789999999999999765542 0 00 1223
Q ss_pred HHHHHHhcCce-eeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCC-ceeHHHHHHHHHHhhccc
Q psy7539 231 GLLIGAGKGII-RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF-QITWYDIIENGKDIARNK 308 (318)
Q Consensus 231 ~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~-~~~~~el~~~i~~~~~~~ 308 (318)
.++....++.. ....+++...++++|++|++.+++.++++... . .||++++ . +.+++|+++.+++.+|.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-----~-~~ni~~~--~~~~~~~e~~~~~~~~~~~~ 259 (314)
T COG0451 188 AFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG-----G-VFNIGSG--TAEITVRELAEAVAEAVGSK 259 (314)
T ss_pred HHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC-----c-EEEeCCC--CCcEEHHHHHHHHHHHhCCC
Confidence 34555666654 55667888889999999999999999998775 4 9999998 7 899999999999999766
Q ss_pred CC
Q psy7539 309 VP 310 (318)
Q Consensus 309 ~p 310 (318)
.|
T Consensus 260 ~~ 261 (314)
T COG0451 260 AP 261 (314)
T ss_pred Cc
Confidence 44
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-25 Score=204.10 Aligned_cols=257 Identities=16% Similarity=0.152 Sum_probs=181.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC-CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK-NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~-~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|+++.|..... ...+++.... .....+++++.+|++++ +.+..+
T Consensus 19 ~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~l~~~ 76 (352)
T PLN02240 19 SHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELA--------------GDLGDNLVFHKVDLRDK------EALEKV 76 (352)
T ss_pred HHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHhh--------------cccCccceEEecCcCCH------HHHHHH
Confidence 4789999988 89999998753321 1111222110 11124688999999876 567777
Q ss_pred hc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC--cccccccCCCCCCh
Q psy7539 80 SE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLEEKTYPPPVSP 152 (318)
Q Consensus 80 ~~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~--~~~~E~~~~~p~~~ 152 (318)
++ ++|+|||+||..... .....++++|+.++.+++++|++. ++++||++||..+|+.. .+++|+.+..|.
T Consensus 77 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~-- 153 (352)
T PLN02240 77 FASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSATVYGQPEEVPCTEEFPLSAT-- 153 (352)
T ss_pred HHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCCCCCCCCCCCCCC--
Confidence 65 689999999975321 234578999999999999999985 78999999998887643 256776544443
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccccccCCCCCCccc-CCC-c
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIIIPIWKDPLPGWTD-NIN-G 228 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~-~~~-~ 228 (318)
+.|+.||.++|++++.+.. .+++++++|++++||.......|+.. .+. .
T Consensus 154 ---------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~ 206 (352)
T PLN02240 154 ---------------------------NPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNN 206 (352)
T ss_pred ---------------------------CHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcch
Confidence 8999999999999998764 47899999999999976543222211 111 1
Q ss_pred hHHHHHHHhcCcee--eEec------CCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHH
Q psy7539 229 PTGLLIGAGKGIIR--TMYC------DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 300 (318)
Q Consensus 229 ~~~~~~~~~~~~~~--~~~~------~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~ 300 (318)
...++.....+... .+.+ ++.+.++|+|++|+|++++.++.+........+++||++++ +++|++|+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~--~~~s~~el~~~ 284 (352)
T PLN02240 207 LMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTG--KGTSVLEMVAA 284 (352)
T ss_pred HHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCC--CcEeHHHHHHH
Confidence 12244444443322 2333 67899999999999999999887531110113579999999 89999999999
Q ss_pred HHHhhcccCCC
Q psy7539 301 GKDIARNKVPL 311 (318)
Q Consensus 301 i~~~~~~~~p~ 311 (318)
+.+.+|.+.|.
T Consensus 285 i~~~~g~~~~~ 295 (352)
T PLN02240 285 FEKASGKKIPL 295 (352)
T ss_pred HHHHhCCCCCc
Confidence 99999765544
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-26 Score=223.44 Aligned_cols=253 Identities=23% Similarity=0.279 Sum_probs=183.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|++...+++|++++|+.+ ..++..... .....+++++.+|++++.++++.+.+..+
T Consensus 14 ~~lv~~Ll~~~~g~~V~~l~R~~~----~~~~~~~~~-------------~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l- 75 (657)
T PRK07201 14 RRLVSRLLDRRREATVHVLVRRQS----LSRLEALAA-------------YWGADRVVPLVGDLTEPGLGLSEADIAEL- 75 (657)
T ss_pred HHHHHHHHhcCCCCEEEEEECcch----HHHHHHHHH-------------hcCCCcEEEEecccCCccCCcCHHHHHHh-
Confidence 478999995224889999999532 122222211 00125789999999999888888888887
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc-ccccccCCCCCChhHHHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEEKTYPPPVSPHNVIEKA 159 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~-~~~E~~~~~p~~~~~~~~~~ 159 (318)
+++|+|||+||..+.........++|+.||.+++++|.+. ++++|||+||.++++... ..+|+....+.
T Consensus 76 ~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~--------- 145 (657)
T PRK07201 76 GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYEGVFREDDFDEGQ--------- 145 (657)
T ss_pred cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCccCccccccchhhc---------
Confidence 8999999999987766666778899999999999999995 789999999998887532 33443221111
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHH---HHHHH
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG---LLIGA 236 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~---~~~~~ 236 (318)
...+.|+.||+++|+++.+. .+++++++||+++||+...+. .+...++.. ++...
T Consensus 146 -----------------~~~~~Y~~sK~~~E~~~~~~--~g~~~~ilRp~~v~G~~~~g~---~~~~~~~~~~~~~~~~~ 203 (657)
T PRK07201 146 -----------------GLPTPYHRTKFEAEKLVREE--CGLPWRVYRPAVVVGDSRTGE---MDKIDGPYYFFKVLAKL 203 (657)
T ss_pred -----------------CCCCchHHHHHHHHHHHHHc--CCCcEEEEcCCeeeecCCCCc---cccCCcHHHHHHHHHHh
Confidence 11278999999999999753 389999999999999764332 112223222 22222
Q ss_pred hcC-ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 237 GKG-IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 237 ~~~-~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
... ....+.+.+.+..+++||+|+++++..++..+.. .+++||++++ +++++.|+++.+.+.+|.+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~~----~g~~~ni~~~--~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 204 AKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKDGR----DGQTFHLTDP--KPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred ccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCcCC----CCCEEEeCCC--CCCcHHHHHHHHHHHhCCCc
Confidence 111 1112345566788999999999999999876443 3789999998 89999999999999997654
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-26 Score=197.01 Aligned_cols=217 Identities=22% Similarity=0.282 Sum_probs=173.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ ++.|+.+.|++...... ....+++++.+|+.+. +.+.+++
T Consensus 12 ~~l~~~l~~~--g~~v~~~~~~~~~~~~~----------------------~~~~~~~~~~~dl~~~------~~~~~~~ 61 (236)
T PF01370_consen 12 SALVRQLLKK--GHEVIVLSRSSNSESFE----------------------EKKLNVEFVIGDLTDK------EQLEKLL 61 (236)
T ss_dssp HHHHHHHHHT--TTEEEEEESCSTGGHHH----------------------HHHTTEEEEESETTSH------HHHHHHH
T ss_pred HHHHHHHHHc--CCccccccccccccccc----------------------cccceEEEEEeecccc------ccccccc
Confidence 3789999998 99999999976543211 1112889999999976 6888888
Q ss_pred cC--ccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChh
Q psy7539 81 ET--IHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~ 153 (318)
++ +|+|||+|+.... .......++.|+.++.+++++|.+. ++++||++||..+|+... +++|+.+..|.
T Consensus 62 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~--- 137 (236)
T PF01370_consen 62 EKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDPDGEPIDEDSPINPL--- 137 (236)
T ss_dssp HHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSSSSSSBETTSGCCHS---
T ss_pred cccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc---
Confidence 75 5999999998632 1345678999999999999999996 779999999998888752 66776655444
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
+.|+.+|.++|++++.+.+ .+++++++||+.+||+. .+... .-.-...+
T Consensus 138 --------------------------~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~-~~~~~---~~~~~~~~ 187 (236)
T PF01370_consen 138 --------------------------SPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG-NPNNN---SSSFLPSL 187 (236)
T ss_dssp --------------------------SHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT-SSSSS---TSSHHHHH
T ss_pred --------------------------ccccccccccccccccccccccccccccccccccccc-ccccc---cccccchh
Confidence 8899999999999999987 79999999999999987 11110 11122467
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEee
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 285 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~ 285 (318)
+..+..+....+++++++.++|+|++|+|++++.+++++.. .++.|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~----~~~~yNig 236 (236)
T PF01370_consen 188 IRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKA----AGGIYNIG 236 (236)
T ss_dssp HHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCT----TTEEEEES
T ss_pred hHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCC----CCCEEEeC
Confidence 77888887777889999999999999999999999999884 28999985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-25 Score=201.84 Aligned_cols=243 Identities=14% Similarity=0.058 Sum_probs=177.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|..+.... ++++..... . .....+++++.+|+++. +.+..++
T Consensus 20 ~~l~~~L~~~--G~~V~~~~r~~~~~~~-~~~~~~~~~---------~--~~~~~~~~~~~~Dl~d~------~~~~~~~ 79 (340)
T PLN02653 20 SYLTEFLLSK--GYEVHGIIRRSSNFNT-QRLDHIYID---------P--HPNKARMKLHYGDLSDA------SSLRRWL 79 (340)
T ss_pred HHHHHHHHHC--CCEEEEEecccccccc-cchhhhccc---------c--ccccCceEEEEecCCCH------HHHHHHH
Confidence 4789999998 9999999997542110 111111000 0 01124688999999986 5777777
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCc-----cEEEEeccccccCCc-ccccccCCCC
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQ-----LFVYVSTAYCHPKEK-VLEEKTYPPP 149 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-----~~v~~SS~~~~~~~~-~~~E~~~~~p 149 (318)
+ ++|+|||+||..... ......+++|+.|+.+++++|.+. +++ +||++||..+|+... +++|+.+..|
T Consensus 80 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p 158 (340)
T PLN02653 80 DDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHP 158 (340)
T ss_pred HHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEeccHHHhCCCCCCCCCCCCCCC
Confidence 6 579999999985432 233456789999999999999985 554 899999988887643 5666554444
Q ss_pred CChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc
Q psy7539 150 VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING 228 (318)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~ 228 (318)
. +.|+.||.++|+++..+.+ ++++++..|+.++||+.... ++..
T Consensus 159 ~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~------~~~~ 203 (340)
T PLN02653 159 R-----------------------------SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGE------NFVT 203 (340)
T ss_pred C-----------------------------ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCc------ccch
Confidence 3 8999999999999999877 78888999999998864221 1111
Q ss_pred --hHHHHHHHhcCcee-eEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 229 --PTGLLIGAGKGIIR-TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 229 --~~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
...++..+..+... ...+++++.++|+||+|+|++++.++++.. .+.||++++ ++++++|+++.+.+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~------~~~yni~~g--~~~s~~e~~~~i~~~~ 275 (340)
T PLN02653 204 RKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQEK------PDDYVVATE--ESHTVEEFLEEAFGYV 275 (340)
T ss_pred hHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcCC------CCcEEecCC--CceeHHHHHHHHHHHc
Confidence 11233344455433 345889999999999999999999998643 468999999 8999999999999998
Q ss_pred cc
Q psy7539 306 RN 307 (318)
Q Consensus 306 ~~ 307 (318)
|.
T Consensus 276 g~ 277 (340)
T PLN02653 276 GL 277 (340)
T ss_pred CC
Confidence 64
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=199.15 Aligned_cols=206 Identities=16% Similarity=0.177 Sum_probs=150.8
Q ss_pred eccCCCCCCCCCHHHHHHHhc--CccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecccc
Q psy7539 61 NGDVAVPDLGISAEDRQMLSE--TIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYC 134 (318)
Q Consensus 61 ~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~ 134 (318)
.+|+++. +.+..+++ ++|+|||+||.... .....++++.|+.++.+|+++|++. ++++|||+||.++
T Consensus 32 ~~Dl~~~------~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~v 104 (306)
T PLN02725 32 ELDLTRQ------ADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCI 104 (306)
T ss_pred cCCCCCH------HHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceee
Confidence 5788775 56777766 68999999997532 2334578999999999999999995 8899999999998
Q ss_pred ccCC--cccccccCCC-CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccc
Q psy7539 135 HPKE--KVLEEKTYPP-PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSI 210 (318)
Q Consensus 135 ~~~~--~~~~E~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~ 210 (318)
|+.. .+++|+.... |..+. ...|+.||.++|++++.+.+ .+++++++||+.
T Consensus 105 yg~~~~~~~~E~~~~~~~~~p~-------------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~ 159 (306)
T PLN02725 105 YPKFAPQPIPETALLTGPPEPT-------------------------NEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTN 159 (306)
T ss_pred cCCCCCCCCCHHHhccCCCCCC-------------------------cchHHHHHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 8753 2566654211 11110 03599999999999988877 789999999999
Q ss_pred cccccCCCCCCcccCCCchHHHH----HHHhcCceeeE-ecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEee
Q psy7539 211 IIPIWKDPLPGWTDNINGPTGLL----IGAGKGIIRTM-YCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 285 (318)
Q Consensus 211 v~G~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~ 285 (318)
+||+...-.+. .+... ..++ .....+....+ ++++.+.++|+|++|+|++++.++.+... .+.||++
T Consensus 160 vyG~~~~~~~~--~~~~~-~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~-----~~~~ni~ 231 (306)
T PLN02725 160 LYGPHDNFHPE--NSHVI-PALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSG-----AEHVNVG 231 (306)
T ss_pred eeCCCCCCCCC--CCccc-HHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcccc-----CcceEeC
Confidence 99976321000 00011 1222 22233433333 67889999999999999999999987543 5678999
Q ss_pred CCCCCceeHHHHHHHHHHhhccc
Q psy7539 286 ANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 286 ~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
++ .++++.|+++.+++.+|.+
T Consensus 232 ~~--~~~s~~e~~~~i~~~~~~~ 252 (306)
T PLN02725 232 SG--DEVTIKELAELVKEVVGFE 252 (306)
T ss_pred CC--CcccHHHHHHHHHHHhCCC
Confidence 98 8999999999999998654
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=197.27 Aligned_cols=252 Identities=15% Similarity=0.126 Sum_probs=176.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|...... ..+.... .....+++++.+|++++ +.+..++
T Consensus 14 ~~l~~~L~~~--g~~V~~~~~~~~~~~--~~~~~~~--------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 69 (338)
T PRK10675 14 SHTCVQLLQN--GHDVVILDNLCNSKR--SVLPVIE--------------RLGGKHPTFVEGDIRNE------ALLTEIL 69 (338)
T ss_pred HHHHHHHHHC--CCeEEEEecCCCchH--hHHHHHH--------------HhcCCCceEEEccCCCH------HHHHHHH
Confidence 4789999988 899999877533221 1111110 00123577889999986 5677766
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCC-CCCCh
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYP-PPVSP 152 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~-~p~~~ 152 (318)
+ ++|+|||+||..... ....+++++|+.++.+|+++|++. ++++||++||..+|+... +++|+.+. .|.
T Consensus 70 ~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~-- 146 (338)
T PRK10675 70 HDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ-- 146 (338)
T ss_pred hcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhCCCCCCccccccCCCCCC--
Confidence 5 699999999975422 233478899999999999999985 889999999988876532 46665432 232
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccccccCCCCCCcccCC--Cc
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIIIPIWKDPLPGWTDNI--NG 228 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~--~~ 228 (318)
+.|+.+|.++|+++..+.+ .+++++++|++.+||.......|..... ..
T Consensus 147 ---------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~ 199 (338)
T PRK10675 147 ---------------------------SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNN 199 (338)
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhH
Confidence 8999999999999998865 3789999999999997543222210000 01
Q ss_pred hHHHHHHHhcCce--eeEec------CCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHH
Q psy7539 229 PTGLLIGAGKGII--RTMYC------DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 300 (318)
Q Consensus 229 ~~~~~~~~~~~~~--~~~~~------~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~ 300 (318)
...++..+..+.. ..+.+ ++.+.++|+|++|+|++++.++...... ..+++||++++ ++++++|+++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~--~~~~~~ni~~~--~~~s~~e~~~~ 275 (338)
T PRK10675 200 LMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANK--PGVHIYNLGAG--VGSSVLDVVNA 275 (338)
T ss_pred HHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhcc--CCCceEEecCC--CceeHHHHHHH
Confidence 1223344443321 12222 5778899999999999999998752110 12579999999 89999999999
Q ss_pred HHHhhcccCC
Q psy7539 301 GKDIARNKVP 310 (318)
Q Consensus 301 i~~~~~~~~p 310 (318)
+.+.+|.+.+
T Consensus 276 i~~~~g~~~~ 285 (338)
T PRK10675 276 FSKACGKPVN 285 (338)
T ss_pred HHHHhCCCCC
Confidence 9999976543
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-24 Score=198.30 Aligned_cols=244 Identities=14% Similarity=0.101 Sum_probs=174.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|+....... .. . .....+++++.+|++++ +.+..++
T Consensus 18 ~~l~~~L~~~--G~~V~~~~r~~~~~~~~--~~-~---------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 71 (349)
T TIGR02622 18 SWLSLWLLEL--GAEVYGYSLDPPTSPNL--FE-L---------------LNLAKKIEDHFGDIRDA------AKLRKAI 71 (349)
T ss_pred HHHHHHHHHC--CCEEEEEeCCCccchhH--HH-H---------------HhhcCCceEEEccCCCH------HHHHHHH
Confidence 4789999988 99999999875432111 00 0 00123677899999986 5777777
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc---ccccccCCCCCCh
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK---VLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~---~~~E~~~~~p~~~ 152 (318)
+ ++|+|||+||..... ......+++|+.|+.+++++|.+...+++||++||..+|+... +.+|..+..|.
T Consensus 72 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~-- 149 (349)
T TIGR02622 72 AEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGH-- 149 (349)
T ss_pred hhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCC--
Confidence 7 479999999964322 2345688999999999999998753378999999988887531 34554433333
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-c-------CCcEEEecccccccccCCCCCCccc
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-A-------GMPCMILRPSIIIPIWKDPLPGWTD 224 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~-------~~~~~ilR~~~v~G~~~~~~~g~~~ 224 (318)
+.|+.||.++|.++..+.+ . +++++++||+++||+.... .
T Consensus 150 ---------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~ 197 (349)
T TIGR02622 150 ---------------------------DPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA-----E 197 (349)
T ss_pred ---------------------------CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch-----h
Confidence 8999999999999988764 2 8999999999999964311 0
Q ss_pred CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHh
Q psy7539 225 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDI 304 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~ 304 (318)
.. -...++..+..|... ..+++.+.++|+|++|+|++++.++++........++.||++++.+.++++.++++.+.+.
T Consensus 198 ~~-~~~~~~~~~~~g~~~-~~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~ 275 (349)
T TIGR02622 198 DR-LIPDVIRAFSSNKIV-IIRNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEF 275 (349)
T ss_pred hh-hhHHHHHHHhcCCCe-EECCCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHH
Confidence 11 123456666666543 3467899999999999999999988753110001257999997422589999999999887
Q ss_pred hc
Q psy7539 305 AR 306 (318)
Q Consensus 305 ~~ 306 (318)
++
T Consensus 276 ~~ 277 (349)
T TIGR02622 276 WW 277 (349)
T ss_pred hc
Confidence 63
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-25 Score=195.09 Aligned_cols=212 Identities=18% Similarity=0.129 Sum_probs=160.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+++ | +|+++.|... .+.+|++++ +.+.+++
T Consensus 14 s~l~~~L~~~--g-~V~~~~~~~~----------------------------------~~~~Dl~d~------~~~~~~~ 50 (299)
T PRK09987 14 WELQRALAPL--G-NLIALDVHST----------------------------------DYCGDFSNP------EGVAETV 50 (299)
T ss_pred HHHHHHhhcc--C-CEEEeccccc----------------------------------cccCCCCCH------HHHHHHH
Confidence 4788889887 6 6888877311 246899876 5777777
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChh
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~ 153 (318)
+ ++|+||||||..... ..+...+++|+.|+.+|+++|++. ++ +|||+||.++|+... +.+|+.+..|.
T Consensus 51 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~--- 125 (299)
T PRK09987 51 RKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFPGTGDIPWQETDATAPL--- 125 (299)
T ss_pred HhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEECCCCCCCcCCCCCCCCC---
Confidence 7 689999999986543 234567889999999999999985 64 799999999987642 67787666665
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
+.|+.||+++|+++..+.. +.+++|++++||+... ++ ...++
T Consensus 126 --------------------------~~Yg~sK~~~E~~~~~~~~---~~~ilR~~~vyGp~~~-------~~--~~~~~ 167 (299)
T PRK09987 126 --------------------------NVYGETKLAGEKALQEHCA---KHLIFRTSWVYAGKGN-------NF--AKTML 167 (299)
T ss_pred --------------------------CHHHHHHHHHHHHHHHhCC---CEEEEecceecCCCCC-------CH--HHHHH
Confidence 8999999999999988743 6799999999996421 11 23455
Q ss_pred HHHhcCceeeEecC--CCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 234 IGAGKGIIRTMYCD--YSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 234 ~~~~~~~~~~~~~~--~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
.....+....+.++ +.+.+.+.++||+++++..++.+... .++||++++ .++|+.|+++.+.+..
T Consensus 168 ~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-----~giyni~~~--~~~s~~e~~~~i~~~~ 234 (299)
T PRK09987 168 RLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-----AGLYHLVAS--GTTTWHDYAALVFEEA 234 (299)
T ss_pred HHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-----CCeEEeeCC--CCccHHHHHHHHHHHH
Confidence 55555655556666 56666677788888888887765432 469999999 8999999999997754
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=193.69 Aligned_cols=234 Identities=19% Similarity=0.223 Sum_probs=174.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|+.+... .....+++++.+|++++ +++..++
T Consensus 14 ~~l~~~L~~~--g~~V~~~~r~~~~~~-----------------------~~~~~~~~~~~~D~~~~------~~l~~~~ 62 (328)
T TIGR03466 14 SAVVRLLLEQ--GEEVRVLVRPTSDRR-----------------------NLEGLDVEIVEGDLRDP------ASLRKAV 62 (328)
T ss_pred HHHHHHHHHC--CCEEEEEEecCcccc-----------------------ccccCCceEEEeeCCCH------HHHHHHH
Confidence 3789999988 899999999644321 01113688999999886 5788888
Q ss_pred cCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC---cccccccCCCCCChhHHH
Q psy7539 81 ETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE---KVLEEKTYPPPVSPHNVI 156 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~---~~~~E~~~~~p~~~~~~~ 156 (318)
+++|+|||+|+.... ...+...++.|+.++.+++++|.+. ++++||++||.++++.. .+.+|+.+..|...
T Consensus 63 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~---- 137 (328)
T TIGR03466 63 AGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGDGTPADETTPSSLDDM---- 137 (328)
T ss_pred hCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCCCCCcCccCCCCcccc----
Confidence 999999999986532 2345678999999999999999985 88999999998888741 25566543333211
Q ss_pred HHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHHH
Q psy7539 157 EKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIG 235 (318)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~ 235 (318)
.+.|+.+|.++|+++..+.. .+++++++||+.+||...... .....++..
T Consensus 138 ----------------------~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~-------~~~~~~~~~ 188 (328)
T TIGR03466 138 ----------------------IGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKP-------TPTGRIIVD 188 (328)
T ss_pred ----------------------cChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCC-------CcHHHHHHH
Confidence 16899999999999999887 689999999999999754211 112234444
Q ss_pred HhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 236 AGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
...+..+.. .+...+|+|++|+|++++.++.+... +..|+++ + .+++++|+++.+.+.+|.+.+
T Consensus 189 ~~~~~~~~~---~~~~~~~i~v~D~a~a~~~~~~~~~~-----~~~~~~~-~--~~~s~~e~~~~i~~~~g~~~~ 252 (328)
T TIGR03466 189 FLNGKMPAY---VDTGLNLVHVDDVAEGHLLALERGRI-----GERYILG-G--ENLTLKQILDKLAEITGRPAP 252 (328)
T ss_pred HHcCCCcee---eCCCcceEEHHHHHHHHHHHHhCCCC-----CceEEec-C--CCcCHHHHHHHHHHHhCCCCC
Confidence 444433222 23457899999999999999987543 6788886 4 589999999999999976543
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=197.41 Aligned_cols=246 Identities=12% Similarity=0.136 Sum_probs=164.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|+... .+.+...+ . ...+++++.+|++++ +.+..++
T Consensus 24 ~~l~~~L~~~--G~~V~~~~r~~~~---~~~~~~~~--------------~-~~~~~~~~~~Dl~~~------~~~~~~~ 77 (353)
T PLN02896 24 SWLVKLLLQR--GYTVHATLRDPAK---SLHLLSKW--------------K-EGDRLRLFRADLQEE------GSFDEAV 77 (353)
T ss_pred HHHHHHHHHC--CCEEEEEeCChHH---HHHHHHhh--------------c-cCCeEEEEECCCCCH------HHHHHHH
Confidence 4789999998 9999999885321 11111110 1 124688999999987 5788888
Q ss_pred cCccEEEEcccccCcc-----hhHH-----HHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC-------ccccc
Q psy7539 81 ETIHIVYHIAATVRFD-----DYMQ-----TYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE-------KVLEE 143 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~-----~~~~-----~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~-------~~~~E 143 (318)
+++|+|||+||..... ..+. ..++.|+.|+.+|+++|.+..++++||++||..+|+.. .+++|
T Consensus 78 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E 157 (353)
T PLN02896 78 KGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDE 157 (353)
T ss_pred cCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCc
Confidence 8999999999975322 1222 24556679999999999875358899999998888642 12444
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCc
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
+. ..|.+ ...+ .....+.|+.||+++|+++..+.+ ++++++++||++|||+...+.
T Consensus 158 ~~-~~p~~-----------------~~~~--~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~--- 214 (353)
T PLN02896 158 TC-QTPID-----------------HVWN--TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS--- 214 (353)
T ss_pred cc-CCcHH-----------------Hhhc--cCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC---
Confidence 31 11110 0000 001115899999999999999987 899999999999999764321
Q ss_pred ccCCCchHHHHHHHhcCceeeE--ec---CCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHH
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTM--YC---DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 297 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el 297 (318)
+......+.....|..... .+ ...+.++|+||+|+|++++.++.++.. .+.|+++ + .++++.|+
T Consensus 215 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~-----~~~~~~~-~--~~~s~~el 283 (353)
T PLN02896 215 ---VPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA-----EGRYICC-V--DSYDMSEL 283 (353)
T ss_pred ---CCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCc-----CccEEec-C--CCCCHHHH
Confidence 1111112222223322111 11 112346999999999999999986543 4578654 4 58999999
Q ss_pred HHHHHHhhc
Q psy7539 298 IENGKDIAR 306 (318)
Q Consensus 298 ~~~i~~~~~ 306 (318)
++.+++.++
T Consensus 284 ~~~i~~~~~ 292 (353)
T PLN02896 284 INHLSKEYP 292 (353)
T ss_pred HHHHHHhCC
Confidence 999999884
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-24 Score=193.03 Aligned_cols=233 Identities=15% Similarity=0.122 Sum_probs=166.4
Q ss_pred ChhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|++.|+++ |+ +|+++.|..... ++.+. .-..+.+|+.+. +.++.+
T Consensus 12 ~~l~~~L~~~--g~~~v~~~~~~~~~~----~~~~~--------------------~~~~~~~d~~~~------~~~~~~ 59 (314)
T TIGR02197 12 SNLVKALNER--GITDILVVDNLRDGH----KFLNL--------------------ADLVIADYIDKE------DFLDRL 59 (314)
T ss_pred HHHHHHHHHc--CCceEEEEecCCCch----hhhhh--------------------hheeeeccCcch------hHHHHH
Confidence 4789999988 87 788887754321 11100 012456777765 345555
Q ss_pred h----cCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc-ccccccCC-CCCCh
Q psy7539 80 S----ETIHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEEKTYP-PPVSP 152 (318)
Q Consensus 80 ~----~~~d~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~-~~~E~~~~-~p~~~ 152 (318)
. .++|+|||+||..... ......+++|+.|+.+++++|.+. ++ +|||+||.++|+... +.+|+... .|.
T Consensus 60 ~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~-- 135 (314)
T TIGR02197 60 EKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDGEAGFREGRELERPL-- 135 (314)
T ss_pred HhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCCCCCcccccCcCCCC--
Confidence 4 3899999999975332 334568899999999999999985 65 799999998887532 44443321 122
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCCCcccCCCc-
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLPGWTDNING- 228 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~- 228 (318)
+.|+.||..+|++++.+.. .+++++++|++.+||+...... .+..
T Consensus 136 ---------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~----~~~~~ 184 (314)
T TIGR02197 136 ---------------------------NVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKG----KMASV 184 (314)
T ss_pred ---------------------------CHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCC----CcccH
Confidence 8899999999999987542 3579999999999997643211 1111
Q ss_pred hHHHHHHHhcCceeeEe------cCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHH
Q psy7539 229 PTGLLIGAGKGIIRTMY------CDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGK 302 (318)
Q Consensus 229 ~~~~~~~~~~~~~~~~~------~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~ 302 (318)
...++..+..+....++ +++++.++|+|++|+++++..++.+ .. +++||++++ .+++++|+++.++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~~-----~~~yni~~~--~~~s~~e~~~~i~ 256 (314)
T TIGR02197 185 AFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-GV-----SGIFNLGTG--RARSFNDLADAVF 256 (314)
T ss_pred HHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-cc-----CceEEcCCC--CCccHHHHHHHHH
Confidence 12455555555444333 4678889999999999999999987 32 679999999 8999999999999
Q ss_pred Hhhccc
Q psy7539 303 DIARNK 308 (318)
Q Consensus 303 ~~~~~~ 308 (318)
+.+|.+
T Consensus 257 ~~~g~~ 262 (314)
T TIGR02197 257 KALGKD 262 (314)
T ss_pred HHhCCC
Confidence 998644
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-24 Score=192.09 Aligned_cols=241 Identities=12% Similarity=0.050 Sum_probs=166.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+.....+.+... .....+++++.+|+++. +.+..++
T Consensus 20 ~~lv~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~l---------------~~~~~~~~~~~~Dl~d~------~~~~~~l 76 (297)
T PLN02583 20 FWLVKRLLSR--GYTVHAAVQKNGETEIEKEIRGL---------------SCEEERLKVFDVDPLDY------HSILDAL 76 (297)
T ss_pred HHHHHHHHhC--CCEEEEEEcCchhhhHHHHHHhc---------------ccCCCceEEEEecCCCH------HHHHHHH
Confidence 4789999998 99999999964322221111111 11124688999999987 5788888
Q ss_pred cCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC-------cccccccCCCCCCh
Q psy7539 81 ETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE-------KVLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~-------~~~~E~~~~~p~~~ 152 (318)
.++|.|+|+++.... .......+++|+.|+.+++++|.+..++++||++||..++... .+++|+.+..+..
T Consensus 77 ~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~- 155 (297)
T PLN02583 77 KGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNF- 155 (297)
T ss_pred cCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHH-
Confidence 999999998875432 2234578999999999999999875468999999997654211 1234432211100
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
.. .....|+.||.++|++++.+.+ .+++++++||++|||+...+. ..
T Consensus 156 ------------------~~----~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~----------~~ 203 (297)
T PLN02583 156 ------------------CR----KFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQH----------NP 203 (297)
T ss_pred ------------------Hh----hcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCc----------hh
Confidence 00 0014799999999999998876 799999999999999654321 00
Q ss_pred HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCCC
Q psy7539 232 LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVPL 311 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p~ 311 (318)
++.+... ..+.+.++||||+|+|++++.+++.+.. .+.|+++++ ....+.++.+++++.+ +..|.
T Consensus 204 ----~~~~~~~---~~~~~~~~~v~V~Dva~a~~~al~~~~~-----~~r~~~~~~--~~~~~~~~~~~~~~~~-p~~~~ 268 (297)
T PLN02583 204 ----YLKGAAQ---MYENGVLVTVDVNFLVDAHIRAFEDVSS-----YGRYLCFNH--IVNTEEDAVKLAQMLS-PLIPS 268 (297)
T ss_pred ----hhcCCcc---cCcccCcceEEHHHHHHHHHHHhcCccc-----CCcEEEecC--CCccHHHHHHHHHHhC-CCCCC
Confidence 1122111 1123456899999999999999997665 457999988 5455788999999988 55544
Q ss_pred C
Q psy7539 312 N 312 (318)
Q Consensus 312 ~ 312 (318)
.
T Consensus 269 ~ 269 (297)
T PLN02583 269 P 269 (297)
T ss_pred C
Confidence 3
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-24 Score=196.40 Aligned_cols=250 Identities=14% Similarity=0.154 Sum_probs=168.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+... .+.+.++... . +. .....+++++.+|++++ +.+..++
T Consensus 67 ~~lv~~L~~~--G~~V~~~~r~~~~---~~~l~~l~~~---~----~~--~~~~~~~~~v~~Dl~d~------~~l~~~i 126 (367)
T PLN02686 67 LAIVDRLLRH--GYSVRIAVDTQED---KEKLREMEMF---G----EM--GRSNDGIWTVMANLTEP------ESLHEAF 126 (367)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHhhh---c----cc--cccCCceEEEEcCCCCH------HHHHHHH
Confidence 4789999998 9999998885321 1222211000 0 00 00113588999999987 5788888
Q ss_pred cCccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccc--cccCC------cccccccCCCC
Q psy7539 81 ETIHIVYHIAATVRFDD---YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAY--CHPKE------KVLEEKTYPPP 149 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~--~~~~~------~~~~E~~~~~p 149 (318)
+++|.|||+|+.+.... ......++|+.++.+++++|.+..++++|||+||.. +++.. ..++|+.....
T Consensus 127 ~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~ 206 (367)
T PLN02686 127 DGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDE 206 (367)
T ss_pred HhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCCh
Confidence 99999999999764322 223567889999999999999744799999999963 44321 12344321110
Q ss_pred CChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc
Q psy7539 150 VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING 228 (318)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~ 228 (318)
. . ...+.+.|+.||.++|++++.+.+ +|++++++||++|||+..... .
T Consensus 207 ~-------------------~----~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~--------~ 255 (367)
T PLN02686 207 S-------------------F----CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRR--------N 255 (367)
T ss_pred h-------------------h----cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCC--------C
Confidence 0 0 001116899999999999998877 799999999999999753211 1
Q ss_pred hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 229 PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
+.. +..+..+.. .+.++ +..+|+||+|+|++++.+++..... ..++.| ++++ .+++++|+++.+.+.+|.+
T Consensus 256 ~~~-~~~~~~g~~-~~~g~--g~~~~v~V~Dva~A~~~al~~~~~~--~~~~~y-i~~g--~~~s~~e~~~~i~~~~g~~ 326 (367)
T PLN02686 256 STA-TIAYLKGAQ-EMLAD--GLLATADVERLAEAHVCVYEAMGNK--TAFGRY-ICFD--HVVSREDEAEELARQIGLP 326 (367)
T ss_pred Chh-HHHHhcCCC-ccCCC--CCcCeEEHHHHHHHHHHHHhccCCC--CCCCcE-EEeC--CCccHHHHHHHHHHHcCCC
Confidence 111 223445532 23333 4467999999999999999753110 025678 7777 7899999999999999755
Q ss_pred CC
Q psy7539 309 VP 310 (318)
Q Consensus 309 ~p 310 (318)
.+
T Consensus 327 ~~ 328 (367)
T PLN02686 327 IN 328 (367)
T ss_pred CC
Confidence 43
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-24 Score=187.72 Aligned_cols=212 Identities=18% Similarity=0.148 Sum_probs=161.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|. .+|+.++ +.+..++
T Consensus 13 ~~l~~~l~~~--g~~v~~~~r~--------------------------------------~~d~~~~------~~~~~~~ 46 (287)
T TIGR01214 13 RELVQQLSPE--GRVVVALTSS--------------------------------------QLDLTDP------EALERLL 46 (287)
T ss_pred HHHHHHHHhc--CCEEEEeCCc--------------------------------------ccCCCCH------HHHHHHH
Confidence 4788999988 8999999882 3566655 5777777
Q ss_pred cC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC--cccccccCCCCCChh
Q psy7539 81 ET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~--~~~~E~~~~~p~~~~ 153 (318)
++ +|+|||+|+..... ......++.|+.++.+++++|.+. +. +||++||.++|+.. .+++|+....|.
T Consensus 47 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~--- 121 (287)
T TIGR01214 47 RAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDGEGKRPYREDDATNPL--- 121 (287)
T ss_pred HhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecCCCCCCCCCCCCCCCc---
Confidence 75 59999999975432 234568899999999999999985 54 89999999888653 256676544443
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
+.|+.+|.++|+++..+ +++++++||+++||+.... + -...++
T Consensus 122 --------------------------~~Y~~~K~~~E~~~~~~---~~~~~ilR~~~v~G~~~~~------~--~~~~~~ 164 (287)
T TIGR01214 122 --------------------------NVYGQSKLAGEQAIRAA---GPNALIVRTSWLYGGGGGR------N--FVRTML 164 (287)
T ss_pred --------------------------chhhHHHHHHHHHHHHh---CCCeEEEEeeecccCCCCC------C--HHHHHH
Confidence 89999999999999877 6799999999999965310 1 122344
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
..+..+....+. +++.++++|++|+|+++..++..+.. .+++||++++ .++++.|+++.+.+.+|.+
T Consensus 165 ~~~~~~~~~~~~--~~~~~~~v~v~Dva~a~~~~~~~~~~----~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~ 231 (287)
T TIGR01214 165 RLAGRGEELRVV--DDQIGSPTYAKDLARVIAALLQRLAR----ARGVYHLANS--GQCSWYEFAQAIFEEAGAD 231 (287)
T ss_pred HHhhcCCCceEe--cCCCcCCcCHHHHHHHHHHHHhhccC----CCCeEEEECC--CCcCHHHHHHHHHHHhCcc
Confidence 444444322233 34678999999999999999987633 2789999998 8999999999999998654
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-24 Score=225.67 Aligned_cols=264 Identities=20% Similarity=0.261 Sum_probs=192.9
Q ss_pred hhHHHHHhhC--CCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 2 VLLEKILRTC--ENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 2 ~l~~~Ll~~~--~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
||+++|+++. ..++|+|++|..+.....+|+.+....+.. +. .....+++++.||++++.+||+.+.+..+
T Consensus 986 ~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~--~~-----~~~~~~i~~~~gDl~~~~lgl~~~~~~~l 1058 (1389)
T TIGR03443 986 FILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI--WD-----EEWASRIEVVLGDLSKEKFGLSDEKWSDL 1058 (1389)
T ss_pred HHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC--Cc-----hhhhcceEEEeccCCCccCCcCHHHHHHH
Confidence 7899999872 136999999987666666666654432111 00 22235899999999999999999999999
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--------------cccccc
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--------------VLEEKT 145 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--------------~~~E~~ 145 (318)
.+++|+|||+||.+++..++..+...|+.||.+++++|.+. ++++|+|+||.++++... .+.|..
T Consensus 1059 ~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~ 1137 (1389)
T TIGR03443 1059 TNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESD 1137 (1389)
T ss_pred HhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCcccccchhhhhhhccCCCCCccc
Confidence 89999999999999888888778889999999999999985 889999999988875321 111111
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDN 225 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~ 225 (318)
...+ ...+..++|+.||+++|+++..+.+.|++++++||++|+|....+.
T Consensus 1138 ~~~~------------------------~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~------ 1187 (1389)
T TIGR03443 1138 DLMG------------------------SSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGA------ 1187 (1389)
T ss_pred cccc------------------------ccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCC------
Confidence 0000 0011237899999999999998766789999999999999765432
Q ss_pred CCchHHHHHHHhcCcee-eEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHh
Q psy7539 226 INGPTGLLIGAGKGIIR-TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDI 304 (318)
Q Consensus 226 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~ 304 (318)
.....++..+.++... ....++.+.++|+||+|+|++++.++.+.... ....+||++++ ..+++.++++.+.+.
T Consensus 1188 -~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~--~~~~i~~~~~~--~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1188 -TNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKE--SELAVAHVTGH--PRIRFNDFLGTLKTY 1262 (1389)
T ss_pred -CCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCccc--CCCCEEEeCCC--CCCcHHHHHHHHHHh
Confidence 1233455555543221 12235567899999999999999998765321 12468999998 789999999999765
Q ss_pred hcccC
Q psy7539 305 ARNKV 309 (318)
Q Consensus 305 ~~~~~ 309 (318)
|.+.
T Consensus 1263 -g~~~ 1266 (1389)
T TIGR03443 1263 -GYDV 1266 (1389)
T ss_pred -CCCC
Confidence 3443
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.2e-24 Score=180.76 Aligned_cols=254 Identities=19% Similarity=0.190 Sum_probs=192.3
Q ss_pred hhHHHHHhhCCCcEEEEEEccC-CCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENVKIYILLRPK-KNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~-~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
|.+-+|+++ |+.|+++.--. .......|++++.. -..++.++++|+.|. +.+++++
T Consensus 17 ht~l~L~~~--gy~v~~vDNl~n~~~~sl~r~~~l~~---------------~~~~v~f~~~Dl~D~------~~L~kvF 73 (343)
T KOG1371|consen 17 HTVLALLKR--GYGVVIVDNLNNSYLESLKRVRQLLG---------------EGKSVFFVEGDLNDA------EALEKLF 73 (343)
T ss_pred HHHHHHHhC--CCcEEEEecccccchhHHHHHHHhcC---------------CCCceEEEEeccCCH------HHHHHHH
Confidence 678899998 99888876542 22333445554422 136899999999986 6899998
Q ss_pred c--CccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCC-CCCh
Q psy7539 81 E--TIHIVYHIAATVRFDD---YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPP-PVSP 152 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~-p~~~ 152 (318)
+ +.|.|+|+|+.-.... .+..++..|+.||.+|++.|++. +++.+|+.||+.+||... +++|+.+.. |.
T Consensus 74 ~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvYG~p~~ip~te~~~t~~p~-- 150 (343)
T KOG1371|consen 74 SEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVYGLPTKVPITEEDPTDQPT-- 150 (343)
T ss_pred hhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeeecCcceeeccCcCCCCCCC--
Confidence 7 7899999999853322 23468899999999999999997 699999999999999865 888877665 54
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
++|+.+|.+.|.++..+.. .+..++.+|..+++|....+..|..- ...+.+
T Consensus 151 ---------------------------~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p-~~~~nn 202 (343)
T KOG1371|consen 151 ---------------------------NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAP-LGIPNN 202 (343)
T ss_pred ---------------------------CcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCC-ccCccc
Confidence 9999999999999999988 77999999999999966555433211 112222
Q ss_pred HH---HHHhcCcee--e------EecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHH
Q psy7539 232 LL---IGAGKGIIR--T------MYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 300 (318)
Q Consensus 232 ~~---~~~~~~~~~--~------~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~ 300 (318)
++ .....+..+ . ...+|+..++++|+-|+|..++.++.+.... .+.++||++++ ...++.+++..
T Consensus 203 l~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~--~~~~i~Nlgtg--~g~~V~~lv~a 278 (343)
T KOG1371|consen 203 LLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGA--AEFGVYNLGTG--KGSSVLELVTA 278 (343)
T ss_pred ccccccchhhcccccceeecCcccccCCCeeecceeeEehHHHHHHHhhccccc--hheeeEeecCC--CCccHHHHHHH
Confidence 22 222222111 1 1236799999999999999999999986642 13569999999 89999999999
Q ss_pred HHHhhcccCCCCC
Q psy7539 301 GKDIARNKVPLNN 313 (318)
Q Consensus 301 i~~~~~~~~p~~~ 313 (318)
+++..|.++|.+.
T Consensus 279 ~~k~~g~~~k~~~ 291 (343)
T KOG1371|consen 279 FEKALGVKIKKKV 291 (343)
T ss_pred HHHHhcCCCCccc
Confidence 9999988777654
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=189.12 Aligned_cols=212 Identities=13% Similarity=0.091 Sum_probs=160.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+... .+ ...+++++.||++++ +.+..++
T Consensus 14 ~~lv~~Ll~~--g~~V~~l~R~~~~~~---~l--------------------~~~~v~~v~~Dl~d~------~~l~~al 62 (317)
T CHL00194 14 RQIVRQALDE--GYQVRCLVRNLRKAS---FL--------------------KEWGAELVYGDLSLP------ETLPPSF 62 (317)
T ss_pred HHHHHHHHHC--CCeEEEEEcChHHhh---hH--------------------hhcCCEEEECCCCCH------HHHHHHH
Confidence 4789999998 999999999642210 00 123689999999987 5788999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|+|||+++... .....+.++|+.++.+++++|++. ++++|||+||.++... +
T Consensus 63 ~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~~-----------~----------- 117 (317)
T CHL00194 63 KGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQY-----------P----------- 117 (317)
T ss_pred CCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecccccccc-----------C-----------
Confidence 99999999986432 223357888999999999999995 8999999999643211 0
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
...|..+|..+|+++... +++++++||+.+|+... . .+......+.
T Consensus 118 ------------------~~~~~~~K~~~e~~l~~~---~l~~tilRp~~~~~~~~-----------~--~~~~~~~~~~ 163 (317)
T CHL00194 118 ------------------YIPLMKLKSDIEQKLKKS---GIPYTIFRLAGFFQGLI-----------S--QYAIPILEKQ 163 (317)
T ss_pred ------------------CChHHHHHHHHHHHHHHc---CCCeEEEeecHHhhhhh-----------h--hhhhhhccCC
Confidence 067899999999988754 89999999997765211 0 1111122222
Q ss_pred eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 241 IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 241 ~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
+....++.+.++|+|++|+|+++..++..+.. .+++||++++ +++|++|+++.+.+..|.+.
T Consensus 164 -~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~----~~~~~ni~g~--~~~s~~el~~~~~~~~g~~~ 225 (317)
T CHL00194 164 -PIWITNESTPISYIDTQDAAKFCLKSLSLPET----KNKTFPLVGP--KSWNSSEIISLCEQLSGQKA 225 (317)
T ss_pred -ceEecCCCCccCccCHHHHHHHHHHHhcCccc----cCcEEEecCC--CccCHHHHHHHHHHHhCCCC
Confidence 23335667889999999999999999987554 3789999999 89999999999999997653
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-22 Score=183.19 Aligned_cols=250 Identities=20% Similarity=0.214 Sum_probs=173.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ +++|+++.|..... .+++... .. ..+++++.+|+.++ +.+..++
T Consensus 13 ~~l~~~l~~~--g~~V~~~~~~~~~~--~~~~~~~---------------~~-~~~~~~~~~D~~~~------~~~~~~~ 66 (328)
T TIGR01179 13 SHTVRQLLES--GHEVVVLDNLSNGS--PEALKRG---------------ER-ITRVTFVEGDLRDR------ELLDRLF 66 (328)
T ss_pred HHHHHHHHhC--CCeEEEEeCCCccc--hhhhhhh---------------cc-ccceEEEECCCCCH------HHHHHHH
Confidence 3688999988 88998876543221 1111110 11 12678889999987 5677776
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChh
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~ 153 (318)
+ ++|+|||+||..... ....+.++.|+.++.+++++|.+. ++++||++||.++++... +++|+.+..|.
T Consensus 67 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~--- 142 (328)
T TIGR01179 67 EEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGEPSSIPISEDSPLGPI--- 142 (328)
T ss_pred HhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCCCCCCCccccCCCCCC---
Confidence 5 799999999975322 233467889999999999999985 788999999988876532 45665444333
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccccccCCCCCCcccC-CCchH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIIIPIWKDPLPGWTDN-INGPT 230 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~-~~~~~ 230 (318)
+.|+.+|.++|+++..+.. .+++++++||+.+||....+..++... .....
T Consensus 143 --------------------------~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~ 196 (328)
T TIGR01179 143 --------------------------NPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLI 196 (328)
T ss_pred --------------------------CchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHH
Confidence 8899999999999998764 589999999999999865443322111 11111
Q ss_pred HHHHHHhcC--ceeeEe------cCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHH
Q psy7539 231 GLLIGAGKG--IIRTMY------CDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGK 302 (318)
Q Consensus 231 ~~~~~~~~~--~~~~~~------~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~ 302 (318)
..+.....+ ....++ .++.+.++|||++|+++++..++...... ..+++||++++ .+++++|+++.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~--~~~~~~n~~~~--~~~s~~ei~~~~~ 272 (328)
T TIGR01179 197 PYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNG--GESHVYNLGYG--QGFSVLEVIEAFK 272 (328)
T ss_pred HHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcC--CCcceEEcCCC--CcccHHHHHHHHH
Confidence 111122221 111121 35678899999999999999998763210 13689999998 8999999999999
Q ss_pred HhhcccCC
Q psy7539 303 DIARNKVP 310 (318)
Q Consensus 303 ~~~~~~~p 310 (318)
+.+|.+.+
T Consensus 273 ~~~g~~~~ 280 (328)
T TIGR01179 273 KVSGVDFP 280 (328)
T ss_pred HHhCCCcc
Confidence 99976544
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.5e-24 Score=177.63 Aligned_cols=234 Identities=21% Similarity=0.206 Sum_probs=180.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+.+ |++|+++.--..... +.+.. -...++++.+.-|+.. .++
T Consensus 41 SHLvdkLm~e--gh~VIa~Dn~ftg~k--~n~~~----------------~~~~~~fel~~hdv~~-----------pl~ 89 (350)
T KOG1429|consen 41 SHLVDKLMTE--GHEVIALDNYFTGRK--ENLEH----------------WIGHPNFELIRHDVVE-----------PLL 89 (350)
T ss_pred HHHHHHHHhc--CCeEEEEecccccch--hhcch----------------hccCcceeEEEeechh-----------HHH
Confidence 4899999998 899999976433221 11111 1122456666666543 477
Q ss_pred cCccEEEEccccc---CcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccC--CCCCChh
Q psy7539 81 ETIHIVYHIAATV---RFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTY--PPPVSPH 153 (318)
Q Consensus 81 ~~~d~Vih~Aa~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~--~~p~~~~ 153 (318)
..+|.|+|+|+.. .+...+-.+..+|+.||.+++-.|++. + +||++.||+-+||... +..|... ..|..++
T Consensus 90 ~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr 167 (350)
T KOG1429|consen 90 KEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPR 167 (350)
T ss_pred HHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecccccCCcccCCCccccccccCcCCch
Confidence 8899999999985 344445568888999999999999985 4 8999999999998732 3344221 2233222
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
..|...|.++|.++.+|.+ .|+.+.|.|+.++||+. +.|.++ .-...+
T Consensus 168 --------------------------~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPr----m~~~dg-rvvsnf 216 (350)
T KOG1429|consen 168 --------------------------SCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPR----MHMDDG-RVVSNF 216 (350)
T ss_pred --------------------------hhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCc----cccCCC-hhhHHH
Confidence 8999999999999999998 89999999999999965 334332 112458
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
+.+.+++....++++|.|.|+|++|+|++++++++++.+.. .-||++++ +.+|+.|+++++.+..|
T Consensus 217 ~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~------~pvNiGnp--~e~Tm~elAemv~~~~~ 282 (350)
T KOG1429|consen 217 IAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR------GPVNIGNP--GEFTMLELAEMVKELIG 282 (350)
T ss_pred HHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc------CCcccCCc--cceeHHHHHHHHHHHcC
Confidence 88888888889999999999999999999999999998774 45999999 89999999999999884
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-22 Score=180.46 Aligned_cols=249 Identities=18% Similarity=0.189 Sum_probs=186.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+..|+++....+|+++..........+... .....+++++.+|+.+. -.+...+
T Consensus 18 ~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~-----------------~~~~~~v~~~~~D~~~~------~~i~~a~ 74 (361)
T KOG1430|consen 18 QHLVQALLENELKLEIRVVDKTPTQSNLPAELT-----------------GFRSGRVTVILGDLLDA------NSISNAF 74 (361)
T ss_pred HHHHHHHHhcccccEEEEeccCccccccchhhh-----------------cccCCceeEEecchhhh------hhhhhhc
Confidence 489999999932358999888654221110000 11256899999999876 3678888
Q ss_pred cCccEEEEccccc--Ccch-hHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcc--cccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATV--RFDD-YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKV--LEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~--~~~~-~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~--~~E~~~~~p~~~~~~ 155 (318)
+++ .|+|+|+.. .+.. ..+..+++|+.||.+++++|.+. ++++|||+||++|.....+ ..++..+.|..
T Consensus 75 ~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~---- 148 (361)
T KOG1430|consen 75 QGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVFGGEPIINGDESLPYPLK---- 148 (361)
T ss_pred cCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEeCCeecccCCCCCCCccc----
Confidence 899 888888864 2323 36789999999999999999996 9999999999999766442 22233333331
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLI 234 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~ 234 (318)
+.+.|+.||..+|+++..... .++..+++||..|||+.+.. -...++.
T Consensus 149 ----------------------~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~---------~~~~i~~ 197 (361)
T KOG1430|consen 149 ----------------------HIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR---------LLPKIVE 197 (361)
T ss_pred ----------------------cccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc---------ccHHHHH
Confidence 227999999999999999985 67999999999999965431 1234555
Q ss_pred HHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc-CCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCCC
Q psy7539 235 GAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL-SNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVPL 311 (318)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~-~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p~ 311 (318)
.+..|......++++...+|++++.|+.+++.|...-. ......++.|+|.++ +++...+++..+.+.+|.+.|.
T Consensus 198 ~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~--~p~~~~~~~~~l~~~lg~~~~~ 273 (361)
T KOG1430|consen 198 ALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDD--TPVRFFDFLSPLVKALGYCLPS 273 (361)
T ss_pred HHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCC--CcchhhHHHHHHHHhcCCCCCc
Confidence 56667777777888999999999999999998876533 212235899999999 8988888888999999888773
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-22 Score=180.17 Aligned_cols=220 Identities=16% Similarity=0.109 Sum_probs=160.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|++++.+.+|+++.|+... .+.+... ....+++++.+|++++ +.+..++
T Consensus 18 ~~l~~~L~~~g~~~~V~~~~r~~~~---~~~~~~~----------------~~~~~~~~v~~Dl~d~------~~l~~~~ 72 (324)
T TIGR03589 18 KAFISRLLENYNPKKIIIYSRDELK---QWEMQQK----------------FPAPCLRFFIGDVRDK------ERLTRAL 72 (324)
T ss_pred HHHHHHHHHhCCCcEEEEEcCChhH---HHHHHHH----------------hCCCcEEEEEccCCCH------HHHHHHH
Confidence 4789999988222689999885321 1111111 0114688999999987 6788888
Q ss_pred cCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHH
Q psy7539 81 ETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~ 157 (318)
+++|+|||+||.... ..+....+++|+.|+.+++++|.+. ++++||++||.... .|.
T Consensus 73 ~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~------------~p~------- 132 (324)
T TIGR03589 73 RGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA------------NPI------- 132 (324)
T ss_pred hcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC------------CCC-------
Confidence 899999999997532 2234578999999999999999985 78899999995421 122
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhh---h-cCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYM---E-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
+.|+.||.++|+++..+. . .|++++++||+++||+.. .+ ...+.
T Consensus 133 ----------------------~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~--------~~--i~~~~ 180 (324)
T TIGR03589 133 ----------------------NLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG--------SV--VPFFK 180 (324)
T ss_pred ----------------------CHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC--------Cc--HHHHH
Confidence 789999999999997643 2 689999999999999532 11 12334
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
.....+.......++.+.++|+||+|+|++++.++++... +.+|+ +.+ ..+++.|+++.+.+..
T Consensus 181 ~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~-----~~~~~-~~~--~~~sv~el~~~i~~~~ 244 (324)
T TIGR03589 181 SLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERMLG-----GEIFV-PKI--PSMKITDLAEAMAPEC 244 (324)
T ss_pred HHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCC-----CCEEc-cCC--CcEEHHHHHHHHHhhC
Confidence 4444453122234778899999999999999999987432 56785 555 5799999999998876
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-22 Score=183.70 Aligned_cols=221 Identities=14% Similarity=0.154 Sum_probs=163.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++++|+.+.........+. .....+++++.+|++++ +.+..++
T Consensus 74 ~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~---------------~~~~~~v~~v~~Dl~d~------~~l~~~~ 130 (390)
T PLN02657 74 KFVVRELVRR--GYNVVAVAREKSGIRGKNGKEDT---------------KKELPGAEVVFGDVTDA------DSLRKVL 130 (390)
T ss_pred HHHHHHHHHC--CCEEEEEEechhhccccchhhHH---------------hhhcCCceEEEeeCCCH------HHHHHHH
Confidence 4789999988 99999999975432110000000 11124789999999987 5788877
Q ss_pred c----CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHH
Q psy7539 81 E----TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVI 156 (318)
Q Consensus 81 ~----~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~ 156 (318)
+ ++|+||||++..... ....+++|+.++.+++++|++. ++++||++||.+++. |.
T Consensus 131 ~~~~~~~D~Vi~~aa~~~~~--~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v~~------------p~------ 189 (390)
T PLN02657 131 FSEGDPVDVVVSCLASRTGG--VKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICVQK------------PL------ 189 (390)
T ss_pred HHhCCCCcEEEECCccCCCC--CccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccccC------------cc------
Confidence 7 599999998853211 1245788999999999999985 899999999987642 11
Q ss_pred HHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 157 EKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
..|..+|...|+.+... ..+++++|+||+.+||.. ..++...
T Consensus 190 -----------------------~~~~~sK~~~E~~l~~~-~~gl~~tIlRp~~~~~~~--------------~~~~~~~ 231 (390)
T PLN02657 190 -----------------------LEFQRAKLKFEAELQAL-DSDFTYSIVRPTAFFKSL--------------GGQVEIV 231 (390)
T ss_pred -----------------------hHHHHHHHHHHHHHHhc-cCCCCEEEEccHHHhccc--------------HHHHHhh
Confidence 67899999999998762 248999999999887621 1233444
Q ss_pred hcCceeeEecCCCccc-CcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 237 GKGIIRTMYCDYSTCA-DFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~-~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
..|....+++++...+ ++||++|+|++++.++..+.. .+++||++++. ..+|++|+++.+.+.+|.+
T Consensus 232 ~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~----~~~~~~Iggp~-~~~S~~Eia~~l~~~lG~~ 299 (390)
T PLN02657 232 KDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESK----INKVLPIGGPG-KALTPLEQGEMLFRILGKE 299 (390)
T ss_pred ccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccc----cCCEEEcCCCC-cccCHHHHHHHHHHHhCCC
Confidence 4555555677887655 679999999999999876543 37899998740 4799999999999999754
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.8e-22 Score=175.16 Aligned_cols=228 Identities=14% Similarity=0.065 Sum_probs=154.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|++++|+....... . ...+ .|+.. +.+...+
T Consensus 12 ~~l~~~L~~~--g~~V~~~~r~~~~~~~~----------------------~-~~~~----~~~~~-------~~~~~~~ 55 (292)
T TIGR01777 12 RALTQRLTKD--GHEVTILTRSPPAGANT----------------------K-WEGY----KPWAP-------LAESEAL 55 (292)
T ss_pred HHHHHHHHHc--CCEEEEEeCCCCCCCcc----------------------c-ceee----ecccc-------cchhhhc
Confidence 3788999988 89999999976543210 0 0011 11111 1234556
Q ss_pred cCccEEEEcccccCc----c-hhHHHHHHHhHHHHHHHHHHHHhcCCCc--cEEEEeccccccCC--cccccccCCCCCC
Q psy7539 81 ETIHIVYHIAATVRF----D-DYMQTYVFLNTRGTRDMLNLSKQMIHLQ--LFVYVSTAYCHPKE--KVLEEKTYPPPVS 151 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~----~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~--~~v~~SS~~~~~~~--~~~~E~~~~~p~~ 151 (318)
.++|+|||+||.... . .....+++.|+.++.+++++|++. +++ .||+.||.++|+.. .+++|+.++.+.
T Consensus 56 ~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~- 133 (292)
T TIGR01777 56 EGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYGTSEDRVFTEEDSPAGD- 133 (292)
T ss_pred CCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeCCCCCCCcCcccCCCCC-
Confidence 789999999997532 1 234568899999999999999985 653 56667776677643 255665422221
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
+.|+..+...|+.+....+.+++++++||+.+||+.. +.. ..
T Consensus 134 ----------------------------~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~--------~~~--~~ 175 (292)
T TIGR01777 134 ----------------------------DFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG--------GAL--AK 175 (292)
T ss_pred ----------------------------ChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCc--------chh--HH
Confidence 4566667777777665444589999999999999642 111 11
Q ss_pred HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCCC
Q psy7539 232 LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVPL 311 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p~ 311 (318)
++....... ...++++++.++|+|++|+|+++..+++++.. .++||++++ .++++.|+++.+++.+|.+.+.
T Consensus 176 ~~~~~~~~~-~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-----~g~~~~~~~--~~~s~~di~~~i~~~~g~~~~~ 247 (292)
T TIGR01777 176 MLPPFRLGL-GGPLGSGRQWFSWIHIEDLVQLILFALENASI-----SGPVNATAP--EPVRNKEFAKALARALHRPAFF 247 (292)
T ss_pred HHHHHhcCc-ccccCCCCcccccEeHHHHHHHHHHHhcCccc-----CCceEecCC--CccCHHHHHHHHHHHhCCCCcC
Confidence 111111111 12246789999999999999999999987543 568999998 8999999999999999765444
Q ss_pred C
Q psy7539 312 N 312 (318)
Q Consensus 312 ~ 312 (318)
.
T Consensus 248 ~ 248 (292)
T TIGR01777 248 P 248 (292)
T ss_pred c
Confidence 3
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=167.58 Aligned_cols=186 Identities=19% Similarity=0.175 Sum_probs=150.9
Q ss_pred ccCCCCCCCCCHHHHHHHhc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecccccc
Q psy7539 62 GDVAVPDLGISAEDRQMLSE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHP 136 (318)
Q Consensus 62 gDl~~~~~gl~~~~~~~~~~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~ 136 (318)
.|++++ +.+.++++ ++|+|||+||.+..+ ..+...+.+|..|+.++.++|.+. + .++||+||.||+.
T Consensus 34 ~Ditd~------~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-g-a~lVhiSTDyVFD 105 (281)
T COG1091 34 LDITDP------DAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-G-ARLVHISTDYVFD 105 (281)
T ss_pred ccccCh------HHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-C-CeEEEeecceEec
Confidence 688877 57787776 689999999997544 445679999999999999999986 4 4899999999986
Q ss_pred CCc--ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccc
Q psy7539 137 KEK--VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPI 214 (318)
Q Consensus 137 ~~~--~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~ 214 (318)
... +..|++.+.|. +-||.||+++|..+.++. -+..|+|.+++||.
T Consensus 106 G~~~~~Y~E~D~~~P~-----------------------------nvYG~sKl~GE~~v~~~~---~~~~I~Rtswv~g~ 153 (281)
T COG1091 106 GEKGGPYKETDTPNPL-----------------------------NVYGRSKLAGEEAVRAAG---PRHLILRTSWVYGE 153 (281)
T ss_pred CCCCCCCCCCCCCCCh-----------------------------hhhhHHHHHHHHHHHHhC---CCEEEEEeeeeecC
Confidence 643 78998888887 999999999999999984 48899999999996
Q ss_pred cCCCCCCcccCCCchHH-HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 215 WKDPLPGWTDNINGPTG-LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 215 ~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
... .... ++.....|. .+....++..+.+++.|+|+++..++..... .++||+++. ..+|
T Consensus 154 ~g~----------nFv~tml~la~~~~--~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~-----~~~yH~~~~--g~~S 214 (281)
T COG1091 154 YGN----------NFVKTMLRLAKEGK--ELKVVDDQYGSPTYTEDLADAILELLEKEKE-----GGVYHLVNS--GECS 214 (281)
T ss_pred CCC----------CHHHHHHHHhhcCC--ceEEECCeeeCCccHHHHHHHHHHHHhcccc-----CcEEEEeCC--Cccc
Confidence 431 1222 233333342 3444567889999999999999999988765 569999998 7789
Q ss_pred HHHHHHHHHHhhc
Q psy7539 294 WYDIIENGKDIAR 306 (318)
Q Consensus 294 ~~el~~~i~~~~~ 306 (318)
|.|+++.|.+.+|
T Consensus 215 wydfa~~I~~~~~ 227 (281)
T COG1091 215 WYEFAKAIFEEAG 227 (281)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999885
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-22 Score=175.27 Aligned_cols=195 Identities=22% Similarity=0.156 Sum_probs=132.2
Q ss_pred eccCCCCCCCCCHHHHHHHhc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccc
Q psy7539 61 NGDVAVPDLGISAEDRQMLSE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCH 135 (318)
Q Consensus 61 ~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~ 135 (318)
..|+.+. +.+..+++ ++|+||||||.++.. ..++..+++|+.++.+|.++|.+. + .++||+||.+|+
T Consensus 34 ~~dl~d~------~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VF 105 (286)
T PF04321_consen 34 DLDLTDP------EAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVF 105 (286)
T ss_dssp CS-TTSH------HHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS
T ss_pred hcCCCCH------HHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEE
Confidence 4555554 56777765 699999999986543 456689999999999999999984 4 599999999998
Q ss_pred cCCc--ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEeccccccc
Q psy7539 136 PKEK--VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIP 213 (318)
Q Consensus 136 ~~~~--~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G 213 (318)
.... +.+|+..+.|. +.||.+|+++|+++.+... +..|+|++.+||
T Consensus 106 dG~~~~~y~E~d~~~P~-----------------------------~~YG~~K~~~E~~v~~~~~---~~~IlR~~~~~g 153 (286)
T PF04321_consen 106 DGDKGGPYTEDDPPNPL-----------------------------NVYGRSKLEGEQAVRAACP---NALILRTSWVYG 153 (286)
T ss_dssp -SSTSSSB-TTS----S-----------------------------SHHHHHHHHHHHHHHHH-S---SEEEEEE-SEES
T ss_pred cCCcccccccCCCCCCC-----------------------------CHHHHHHHHHHHHHHHhcC---CEEEEecceecc
Confidence 6643 67888777776 9999999999999998643 899999999999
Q ss_pred ccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 214 IWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
.... .-...++..+..+.... ...++.++.++++|+|+++..++++.... ....++||++++ +.+|
T Consensus 154 ~~~~---------~~~~~~~~~~~~~~~i~--~~~d~~~~p~~~~dlA~~i~~l~~~~~~~-~~~~Giyh~~~~--~~~S 219 (286)
T PF04321_consen 154 PSGR---------NFLRWLLRRLRQGEPIK--LFDDQYRSPTYVDDLARVILELIEKNLSG-ASPWGIYHLSGP--ERVS 219 (286)
T ss_dssp SSSS---------SHHHHHHHHHHCTSEEE--EESSCEE--EEHHHHHHHHHHHHHHHHH--GGG-EEEE---B--S-EE
T ss_pred cCCC---------chhhhHHHHHhcCCeeE--eeCCceeCCEEHHHHHHHHHHHHHhcccc-cccceeEEEecC--cccC
Confidence 6221 11234555555664433 34477899999999999999999986620 012589999999 8999
Q ss_pred HHHHHHHHHHhhcccC
Q psy7539 294 WYDIIENGKDIARNKV 309 (318)
Q Consensus 294 ~~el~~~i~~~~~~~~ 309 (318)
+.|+++.+.+.+|.+.
T Consensus 220 ~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 220 RYEFAEAIAKILGLDP 235 (286)
T ss_dssp HHHHHHHHHHHHTHCT
T ss_pred HHHHHHHHHHHhCCCC
Confidence 9999999999996543
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=180.30 Aligned_cols=222 Identities=14% Similarity=0.103 Sum_probs=158.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+..... .+.. ..+.... ......++++.+|+.+ +..++
T Consensus 70 ~~lv~~L~~~--G~~V~~l~R~~~~~~---~~~~----~~~~~~~-----~l~~~~v~~v~~D~~d---------~~~~~ 126 (378)
T PLN00016 70 FYLAKELVKA--GHEVTLFTRGKEPSQ---KMKK----EPFSRFS-----ELSSAGVKTVWGDPAD---------VKSKV 126 (378)
T ss_pred HHHHHHHHHC--CCEEEEEecCCcchh---hhcc----Cchhhhh-----HhhhcCceEEEecHHH---------HHhhh
Confidence 4789999998 999999999754321 1100 0000000 0011358899999875 23333
Q ss_pred --cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHHH
Q psy7539 81 --ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNVI 156 (318)
Q Consensus 81 --~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~~ 156 (318)
.++|+|||+++. +..++.+|+++|++. ++++|||+||.++|+... +..|....
T Consensus 127 ~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~vyg~~~~~p~~E~~~~--------- 183 (378)
T PLN00016 127 AGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCSSAGVYKKSDEPPHVEGDAV--------- 183 (378)
T ss_pred ccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEccHhhcCCCCCCCCCCCCcC---------
Confidence 479999999763 245788999999985 899999999998887532 33343221
Q ss_pred HHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 157 EKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
.++. +|+.+|+++... +++++++||+++||+.... .....++..+
T Consensus 184 -----------------------~p~~-sK~~~E~~l~~~---~l~~~ilRp~~vyG~~~~~--------~~~~~~~~~~ 228 (378)
T PLN00016 184 -----------------------KPKA-GHLEVEAYLQKL---GVNWTSFRPQYIYGPGNNK--------DCEEWFFDRL 228 (378)
T ss_pred -----------------------CCcc-hHHHHHHHHHHc---CCCeEEEeceeEECCCCCC--------chHHHHHHHH
Confidence 2222 899999988654 8999999999999965321 0112345555
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
..+....+++++.+.++|+|++|+|++++.++.++.. .+++||++++ ..+++.|+++.+.+.+|.+.
T Consensus 229 ~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~----~~~~yni~~~--~~~s~~el~~~i~~~~g~~~ 295 (378)
T PLN00016 229 VRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKA----AGQIFNIVSD--RAVTFDGMAKACAKAAGFPE 295 (378)
T ss_pred HcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccc----cCCEEEecCC--CccCHHHHHHHHHHHhCCCC
Confidence 6665556678889999999999999999999987543 2689999998 88999999999999987543
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-22 Score=174.98 Aligned_cols=228 Identities=19% Similarity=0.182 Sum_probs=156.1
Q ss_pred hhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
.|+++|++. +. +|+++.|+++.. -.++.-+. .....+.....+.++.||+++. +.+..++
T Consensus 13 eL~rql~~~--~p~~lil~d~~E~~l---~~l~~~l~--------~~~~~~~v~~~~~~vigDvrd~------~~l~~~~ 73 (293)
T PF02719_consen 13 ELVRQLLRY--GPKKLILFDRDENKL---YELERELR--------SRFPDPKVRFEIVPVIGDVRDK------ERLNRIF 73 (293)
T ss_dssp HHHHHHHCC--B-SEEEEEES-HHHH---HHHHHHCH--------HHC--TTCEEEEE--CTSCCHH------HHHHHHT
T ss_pred HHHHHHHhc--CCCeEEEeCCChhHH---HHHHHHHh--------hcccccCcccccCceeecccCH------HHHHHHH
Confidence 589999988 76 899999964321 12221110 0000000111234569999987 6788888
Q ss_pred c--CccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHH
Q psy7539 81 E--TIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~ 155 (318)
+ ++|+|||+||.-+. ...+.+..++|+.||.|++++|.+. ++++||++||.-+.. |.
T Consensus 74 ~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~------------Pt----- 135 (293)
T PF02719_consen 74 EEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVN------------PT----- 135 (293)
T ss_dssp T--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS-------------------
T ss_pred hhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCC------------CC-----
Confidence 8 99999999998432 3456689999999999999999996 999999999976532 22
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-c---CCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-A---GMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~---~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
+.||+||..+|+++..+.. . +.+++++|.|+|.|+..+-. .-
T Consensus 136 ------------------------nvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVi----------p~ 181 (293)
T PF02719_consen 136 ------------------------NVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVI----------PL 181 (293)
T ss_dssp ------------------------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCH----------HH
T ss_pred ------------------------cHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHH----------HH
Confidence 9999999999999999987 3 57999999999999764432 24
Q ss_pred HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 232 LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
|...+..|.+ .-..+++..|-|+.+++++..++.++..... +++|.+--+ .++++.|+++.+.+..|.+
T Consensus 182 F~~Qi~~g~P-lTvT~p~mtRffmti~EAv~Lvl~a~~~~~~-----geifvl~mg--~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 182 FKKQIKNGGP-LTVTDPDMTRFFMTIEEAVQLVLQAAALAKG-----GEIFVLDMG--EPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp HHHHHHTTSS-EEECETT-EEEEE-HHHHHHHHHHHHHH--T-----TEEEEE-----TCEECCCHHHHHHHHTT-E
T ss_pred HHHHHHcCCc-ceeCCCCcEEEEecHHHHHHHHHHHHhhCCC-----CcEEEecCC--CCcCHHHHHHHHHhhcccc
Confidence 5556666654 3456889999999999999999999988765 889999998 8999999999999988653
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.3e-21 Score=175.77 Aligned_cols=222 Identities=18% Similarity=0.140 Sum_probs=177.2
Q ss_pred hhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
.|++++++. +. +|+.+.|++.+.. .+..-+ +... ...++.++.||+.|. +.+..++
T Consensus 265 el~~qil~~--~p~~i~l~~~~E~~~~---~i~~el--------~~~~----~~~~~~~~igdVrD~------~~~~~~~ 321 (588)
T COG1086 265 ELCRQILKF--NPKEIILFSRDEYKLY---LIDMEL--------REKF----PELKLRFYIGDVRDR------DRVERAM 321 (588)
T ss_pred HHHHHHHhc--CCCEEEEecCchHHHH---HHHHHH--------HhhC----CCcceEEEecccccH------HHHHHHH
Confidence 578899988 77 8999999754322 122111 1111 135899999999987 6888999
Q ss_pred cC--ccEEEEcccccC---cchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHH
Q psy7539 81 ET--IHIVYHIAATVR---FDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~ 155 (318)
++ +|+|||+||.-+ ...++.+...+|+.||.|++++|.+. ++++||.+||..+.. |.
T Consensus 322 ~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iSTDKAV~------------Pt----- 383 (588)
T COG1086 322 EGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLISTDKAVN------------PT----- 383 (588)
T ss_pred hcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEecCcccC------------Cc-----
Confidence 86 999999999743 34567799999999999999999996 999999999976532 22
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--c--CCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--A--GMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~--~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
|.||.||.++|.++.++.. . +..++++|.|+|.|+..+..| -
T Consensus 384 ------------------------NvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViP----------l 429 (588)
T COG1086 384 ------------------------NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIP----------L 429 (588)
T ss_pred ------------------------hHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHH----------H
Confidence 9999999999999999876 2 489999999999997654332 2
Q ss_pred HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 232 LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
|.....+|.+ .-..+++-.|-|+.+.+.|+.++.+...... +.+|.+..| +|+++.|+++.+.+..|
T Consensus 430 Fk~QI~~Ggp-lTvTdp~mtRyfMTI~EAv~LVlqA~a~~~g-----GeifvldMG--epvkI~dLAk~mi~l~g 496 (588)
T COG1086 430 FKKQIAEGGP-LTVTDPDMTRFFMTIPEAVQLVLQAGAIAKG-----GEIFVLDMG--EPVKIIDLAKAMIELAG 496 (588)
T ss_pred HHHHHHcCCC-ccccCCCceeEEEEHHHHHHHHHHHHhhcCC-----CcEEEEcCC--CCeEHHHHHHHHHHHhC
Confidence 4444556643 3457899999999999999999999887664 899999998 89999999999999996
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-20 Score=156.37 Aligned_cols=247 Identities=16% Similarity=0.091 Sum_probs=183.3
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+|.+.||.+ |+.|+.+.|+++.-+.. |+ .+++.+ .....+++++.||++|. ..+.++++
T Consensus 17 YLa~lLLek--GY~VhGi~Rrss~~n~~-ri-~L~~~~-----------~~~~~~l~l~~gDLtD~------~~l~r~l~ 75 (345)
T COG1089 17 YLAELLLEK--GYEVHGIKRRSSSFNTP-RI-HLYEDP-----------HLNDPRLHLHYGDLTDS------SNLLRILE 75 (345)
T ss_pred HHHHHHHhc--CcEEEEEeeccccCCcc-cc-eecccc-----------ccCCceeEEEeccccch------HHHHHHHH
Confidence 467777777 99999999986544321 11 121110 22234699999999987 46777776
Q ss_pred --CccEEEEccccc----CcchhHHHHHHHhHHHHHHHHHHHHhcCC-CccEEEEeccccccC--CcccccccCCCCCCh
Q psy7539 82 --TIHIVYHIAATV----RFDDYMQTYVFLNTRGTRDMLNLSKQMIH-LQLFVYVSTAYCHPK--EKVLEEKTYPPPVSP 152 (318)
Q Consensus 82 --~~d~Vih~Aa~~----~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~v~~SS~~~~~~--~~~~~E~~~~~p~~~ 152 (318)
++|-|+|+||++ +|..+ ..+.+++-.||.+|||+.+.... -.+|...||.-.+|. ..+.+|..+-.|.
T Consensus 76 ~v~PdEIYNLaAQS~V~vSFe~P-~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPr-- 152 (345)
T COG1089 76 EVQPDEIYNLAAQSHVGVSFEQP-EYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-- 152 (345)
T ss_pred hcCchhheeccccccccccccCc-ceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCC--
Confidence 789999999986 44443 36788899999999999998632 358999999666654 3477887776666
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
++|+.+|..+..+..+|.+ +|+-.|.=.+. ++++|..|...-......
T Consensus 153 ---------------------------SPYAvAKlYa~W~tvNYResYgl~AcnGILF----NHESP~Rge~FVTRKIt~ 201 (345)
T COG1089 153 ---------------------------SPYAVAKLYAYWITVNYRESYGLFACNGILF----NHESPLRGETFVTRKITR 201 (345)
T ss_pred ---------------------------CHHHHHHHHHHheeeehHhhcCceeecceee----cCCCCCCccceehHHHHH
Confidence 9999999999999999998 88766543322 355565543222222345
Q ss_pred HHHHHhcCcee-eEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 232 LLIGAGKGIIR-TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
.+..+..|... ...|+.+..+||-|+.|.+++++.+++++. ...|+++++ ...|++|++++..+..|.++.
T Consensus 202 ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~------PddyViATg--~t~sVrefv~~Af~~~g~~l~ 273 (345)
T COG1089 202 AVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE------PDDYVIATG--ETHSVREFVELAFEMVGIDLE 273 (345)
T ss_pred HHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC------CCceEEecC--ceeeHHHHHHHHHHHcCceEE
Confidence 66666667655 457899999999999999999999999987 479999999 899999999999998875544
Q ss_pred C
Q psy7539 311 L 311 (318)
Q Consensus 311 ~ 311 (318)
+
T Consensus 274 w 274 (345)
T COG1089 274 W 274 (345)
T ss_pred E
Confidence 3
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-19 Score=160.25 Aligned_cols=177 Identities=15% Similarity=0.102 Sum_probs=125.3
Q ss_pred HHHHHhc--CccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc-------
Q psy7539 75 DRQMLSE--TIHIVYHIAATVRF------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK------- 139 (318)
Q Consensus 75 ~~~~~~~--~~d~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~------- 139 (318)
.+...++ ++|+|||+||.... ...+.+++++|+.||.+|+++|++. +++ ++++||..+++...
T Consensus 48 ~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~~vy~~~~~~p~~~~ 125 (298)
T PLN02778 48 SLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATGCIFEYDDAHPLGSG 125 (298)
T ss_pred HHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecceEeCCCCCCCcccC
Confidence 3444443 78999999998632 2345678999999999999999996 775 56666655554311
Q ss_pred -ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCC
Q psy7539 140 -VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 140 -~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~ 218 (318)
+++|+..+.+ + .+.|+.||+++|+++..+. +..++|++.++|...
T Consensus 126 ~~~~Ee~~p~~--~--------------------------~s~Yg~sK~~~E~~~~~y~----~~~~lr~~~~~~~~~-- 171 (298)
T PLN02778 126 IGFKEEDTPNF--T--------------------------GSFYSKTKAMVEELLKNYE----NVCTLRVRMPISSDL-- 171 (298)
T ss_pred CCCCcCCCCCC--C--------------------------CCchHHHHHHHHHHHHHhh----ccEEeeecccCCccc--
Confidence 2444332221 1 1789999999999998875 356788877666321
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHH
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDII 298 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~ 298 (318)
..+..++..+..+...... ..+++|++|++++++.++.+.. .++||++++ .++++.|++
T Consensus 172 --------~~~~~fi~~~~~~~~~~~~-----~~s~~yv~D~v~al~~~l~~~~------~g~yNigs~--~~iS~~el~ 230 (298)
T PLN02778 172 --------SNPRNFITKITRYEKVVNI-----PNSMTILDELLPISIEMAKRNL------TGIYNFTNP--GVVSHNEIL 230 (298)
T ss_pred --------ccHHHHHHHHHcCCCeeEc-----CCCCEEHHHHHHHHHHHHhCCC------CCeEEeCCC--CcccHHHHH
Confidence 1123466666665432222 1379999999999999986543 469999999 899999999
Q ss_pred HHHHHhhccc
Q psy7539 299 ENGKDIARNK 308 (318)
Q Consensus 299 ~~i~~~~~~~ 308 (318)
+.+++.+|.+
T Consensus 231 ~~i~~~~~~~ 240 (298)
T PLN02778 231 EMYRDYIDPS 240 (298)
T ss_pred HHHHHHhCCC
Confidence 9999999754
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-19 Score=174.95 Aligned_cols=189 Identities=13% Similarity=0.058 Sum_probs=145.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|..... ...++.++.+|+.++ +.+..++
T Consensus 14 s~La~~Ll~~--G~~Vv~l~R~~~~~--------------------------~~~~v~~v~gDL~D~------~~l~~al 59 (854)
T PRK05865 14 RGLTARLLSQ--GHEVVGIARHRPDS--------------------------WPSSADFIAADIRDA------TAVESAM 59 (854)
T ss_pred HHHHHHHHHC--cCEEEEEECCchhh--------------------------cccCceEEEeeCCCH------HHHHHHH
Confidence 4789999988 99999999963211 113578899999986 5788888
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|+|||+|+.... .+++|+.|+.+++++|++. ++++|||+||.
T Consensus 60 ~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~---------------------------- 104 (854)
T PRK05865 60 TGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSG---------------------------- 104 (854)
T ss_pred hCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCc----------------------------
Confidence 999999999986432 4688999999999999985 88999999982
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
. |.++|+++.++ +++++++||+++||+.. ..++..+.. .
T Consensus 105 -------------------~-----K~aaE~ll~~~---gl~~vILRp~~VYGP~~-------------~~~i~~ll~-~ 143 (854)
T PRK05865 105 -------------------H-----QPRVEQMLADC---GLEWVAVRCALIFGRNV-------------DNWVQRLFA-L 143 (854)
T ss_pred -------------------H-----HHHHHHHHHHc---CCCEEEEEeceEeCCCh-------------HHHHHHHhc-C
Confidence 2 77888888654 89999999999999531 122333222 1
Q ss_pred eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 241 IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 241 ~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
.....+++.+.++|+|++|+|+++..++.+... .+++||++++ ..+|++|+++.+.+..
T Consensus 144 ~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~----~ggvyNIgsg--~~~Si~EIae~l~~~~ 202 (854)
T PRK05865 144 PVLPAGYADRVVQVVHSDDAQRLLVRALLDTVI----DSGPVNLAAP--GELTFRRIAAALGRPM 202 (854)
T ss_pred ceeccCCCCceEeeeeHHHHHHHHHHHHhCCCc----CCCeEEEECC--CcccHHHHHHHHhhhh
Confidence 112234556678999999999999999875432 2679999999 8999999999998743
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=6e-18 Score=142.24 Aligned_cols=220 Identities=15% Similarity=0.089 Sum_probs=146.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+.+|.+. |++|++++|+.+..+. .....+. .. +.+....
T Consensus 12 ~~L~~~L~~~--gh~v~iltR~~~~~~~-----------------------~~~~~v~--~~-----------~~~~~~~ 53 (297)
T COG1090 12 RALTARLRKG--GHQVTILTRRPPKASQ-----------------------NLHPNVT--LW-----------EGLADAL 53 (297)
T ss_pred HHHHHHHHhC--CCeEEEEEcCCcchhh-----------------------hcCcccc--cc-----------chhhhcc
Confidence 5789999988 9999999998654421 0011111 11 1233333
Q ss_pred c-CccEEEEcccccC----cchhH-HHHHHHhHHHHHHHHHHHHhcC-CCccEEEEeccccccCCc--ccccccCCCCCC
Q psy7539 81 E-TIHIVYHIAATVR----FDDYM-QTYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTAYCHPKEK--VLEEKTYPPPVS 151 (318)
Q Consensus 81 ~-~~d~Vih~Aa~~~----~~~~~-~~~~~~Nv~gt~~ll~~a~~~~-~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~ 151 (318)
. ++|+|||+||..- +...+ +..++..+..|..|.++..+.. .++.||.-|.++-|+... .++|..++..
T Consensus 54 ~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~-- 131 (297)
T COG1090 54 TLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGD-- 131 (297)
T ss_pred cCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCC--
Confidence 3 7999999999852 33343 3588999999999999988642 344555555556666643 6777632221
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
+.-+..=..=|.........|.+++++|.|+|.+... +..+...
T Consensus 132 ----------------------------~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~G--------GaL~~m~ 175 (297)
T COG1090 132 ----------------------------DFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDG--------GALGKML 175 (297)
T ss_pred ----------------------------ChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCC--------cchhhhc
Confidence 1111111112333333333488999999999998543 2222212
Q ss_pred HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 232 LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
-...+..| -..|+|+|+++|||++|++++|..++++... .+.||++++ +|++.++|.+.+++.+.
T Consensus 176 ~~fk~glG---G~~GsGrQ~~SWIhieD~v~~I~fll~~~~l-----sGp~N~taP--~PV~~~~F~~al~r~l~ 240 (297)
T COG1090 176 PLFKLGLG---GKLGSGRQWFSWIHIEDLVNAILFLLENEQL-----SGPFNLTAP--NPVRNKEFAHALGRALH 240 (297)
T ss_pred chhhhccC---CccCCCCceeeeeeHHHHHHHHHHHHhCcCC-----CCcccccCC--CcCcHHHHHHHHHHHhC
Confidence 22222222 2348999999999999999999999999776 689999999 99999999999999984
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.6e-17 Score=156.93 Aligned_cols=190 Identities=13% Similarity=0.058 Sum_probs=136.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|..... ...+++++.+|+.++ .+..++
T Consensus 14 s~La~~Ll~~--G~~Vi~ldr~~~~~--------------------------~~~~ve~v~~Dl~d~-------~l~~al 58 (699)
T PRK12320 14 RSVTRQLIAA--GHTVSGIAQHPHDA--------------------------LDPRVDYVCASLRNP-------VLQELA 58 (699)
T ss_pred HHHHHHHHhC--CCEEEEEeCChhhc--------------------------ccCCceEEEccCCCH-------HHHHHh
Confidence 4789999998 99999999853210 123688999999875 366777
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|+|||+|+..... ...+|+.|+.+++++|++. ++ ++||+||.++ ..
T Consensus 59 ~~~D~VIHLAa~~~~~-----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~G--~~---------------------- 107 (699)
T PRK12320 59 GEADAVIHLAPVDTSA-----PGGVGITGLAHVANAAARA-GA-RLLFVSQAAG--RP---------------------- 107 (699)
T ss_pred cCCCEEEEcCccCccc-----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCCC--CC----------------------
Confidence 8999999999864211 2257999999999999985 66 7999998742 10
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
..|. .+|.++..+ +++++++|++++||+.... ....++..+....
T Consensus 108 -------------------~~~~----~aE~ll~~~---~~p~~ILR~~nVYGp~~~~---------~~~r~I~~~l~~~ 152 (699)
T PRK12320 108 -------------------ELYR----QAETLVSTG---WAPSLVIRIAPPVGRQLDW---------MVCRTVATLLRSK 152 (699)
T ss_pred -------------------cccc----HHHHHHHhc---CCCEEEEeCceecCCCCcc---------cHhHHHHHHHHHH
Confidence 1232 367766543 6899999999999964221 1122333333211
Q ss_pred eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 241 IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 241 ~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
. ....+.++||+|++++++.+++... .++||++++ ..+|+.|+++.++...
T Consensus 153 ~------~~~pI~vIyVdDvv~alv~al~~~~------~GiyNIG~~--~~~Si~el~~~i~~~~ 203 (699)
T PRK12320 153 V------SARPIRVLHLDDLVRFLVLALNTDR------NGVVDLATP--DTTNVVTAWRLLRSVD 203 (699)
T ss_pred H------cCCceEEEEHHHHHHHHHHHHhCCC------CCEEEEeCC--CeeEHHHHHHHHHHhC
Confidence 1 1234456999999999999987633 359999999 8999999999997763
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.7e-17 Score=144.56 Aligned_cols=199 Identities=11% Similarity=0.088 Sum_probs=139.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++++|+.+... ..+++.+.+|+.++ +.+..++
T Consensus 13 ~~vv~~L~~~--g~~V~~~~R~~~~~~--------------------------~~~~~~~~~d~~d~------~~l~~a~ 58 (285)
T TIGR03649 13 SRIARLLQAA--SVPFLVASRSSSSSA--------------------------GPNEKHVKFDWLDE------DTWDNPF 58 (285)
T ss_pred HHHHHHHHhC--CCcEEEEeCCCcccc--------------------------CCCCccccccCCCH------HHHHHHH
Confidence 4789999988 999999999754321 13566788999887 5788877
Q ss_pred ------cC-ccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChh
Q psy7539 81 ------ET-IHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ------~~-~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~ 153 (318)
++ +|.|+|+++.... ....+.+++++|++. ++++||++||..+...
T Consensus 59 ~~~~~~~g~~d~v~~~~~~~~~----------~~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~~~---------------- 111 (285)
T TIGR03649 59 SSDDGMEPEISAVYLVAPPIPD----------LAPPMIKFIDFARSK-GVRRFVLLSASIIEKG---------------- 111 (285)
T ss_pred hcccCcCCceeEEEEeCCCCCC----------hhHHHHHHHHHHHHc-CCCEEEEeeccccCCC----------------
Confidence 56 9999999875321 023456899999996 9999999999654211
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
+..+...|+.+... .|++++++||+..+.....+. ..
T Consensus 112 -----------------------------~~~~~~~~~~l~~~--~gi~~tilRp~~f~~~~~~~~------------~~ 148 (285)
T TIGR03649 112 -----------------------------GPAMGQVHAHLDSL--GGVEYTVLRPTWFMENFSEEF------------HV 148 (285)
T ss_pred -----------------------------CchHHHHHHHHHhc--cCCCEEEEeccHHhhhhcccc------------cc
Confidence 00112234443322 289999999998775321100 00
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
..... ......+.+++.++|++++|+|+++..++..+.. .++.|+++++ ..+|++|+++.+.+.+|.+.+
T Consensus 149 ~~~~~-~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~----~~~~~~l~g~--~~~s~~eia~~l~~~~g~~v~ 218 (285)
T TIGR03649 149 EAIRK-ENKIYSATGDGKIPFVSADDIARVAYRALTDKVA----PNTDYVVLGP--ELLTYDDVAEILSRVLGRKIT 218 (285)
T ss_pred ccccc-CCeEEecCCCCccCcccHHHHHHHHHHHhcCCCc----CCCeEEeeCC--ccCCHHHHHHHHHHHhCCceE
Confidence 11111 1123345678899999999999999999987654 3678999998 899999999999999977654
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.8e-17 Score=135.11 Aligned_cols=219 Identities=12% Similarity=0.109 Sum_probs=166.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+.++.+|.+. |.+|++.-|..+.. ..+|+-+ -...++-++..|+.|+ +++..+.
T Consensus 75 ryvvnklak~--GSQviiPyR~d~~~--~r~lkvm----------------GdLGQvl~~~fd~~De------dSIr~vv 128 (391)
T KOG2865|consen 75 RYVVNKLAKM--GSQVIIPYRGDEYD--PRHLKVM----------------GDLGQVLFMKFDLRDE------DSIRAVV 128 (391)
T ss_pred HHHHHHHhhc--CCeEEEeccCCccc--hhheeec----------------ccccceeeeccCCCCH------HHHHHHH
Confidence 3578888888 88999999974322 2222211 1235788899999987 7899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+...+|||+-|---....+ .+.++|+.+..+|...|+++ ++.+|||+|+..+.-.
T Consensus 129 k~sNVVINLIGrd~eTknf-~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv~----------------------- 183 (391)
T KOG2865|consen 129 KHSNVVINLIGRDYETKNF-SFEDVNVHIAERLARICKEA-GVERFIHVSCLGANVK----------------------- 183 (391)
T ss_pred HhCcEEEEeeccccccCCc-ccccccchHHHHHHHHHHhh-Chhheeehhhcccccc-----------------------
Confidence 9999999999963323333 67899999999999999996 9999999999763210
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
.++-|-.+|.++|..+++... ..+|+||+.+||..+ .+..+...++.- -+.
T Consensus 184 -----------------s~Sr~LrsK~~gE~aVrdafP---eAtIirPa~iyG~eD--------rfln~ya~~~rk-~~~ 234 (391)
T KOG2865|consen 184 -----------------SPSRMLRSKAAGEEAVRDAFP---EATIIRPADIYGTED--------RFLNYYASFWRK-FGF 234 (391)
T ss_pred -----------------ChHHHHHhhhhhHHHHHhhCC---cceeechhhhcccch--------hHHHHHHHHHHh-cCc
Confidence 117899999999999998865 689999999999643 233333333333 234
Q ss_pred eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 241 IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 241 ~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
++.....-...-..|+|-|||++|+.|+..+.+ .+.+|.++++ ....+.|+++++-+..
T Consensus 235 ~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s----~Gktye~vGP--~~yql~eLvd~my~~~ 293 (391)
T KOG2865|consen 235 LPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDS----MGKTYEFVGP--DRYQLSELVDIMYDMA 293 (391)
T ss_pred eeeecCCcceeeccEEEehHHHHHHHhccCccc----cCceeeecCC--chhhHHHHHHHHHHHH
Confidence 333333336788999999999999999999877 4899999999 8999999999987766
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-16 Score=130.86 Aligned_cols=172 Identities=19% Similarity=0.220 Sum_probs=129.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ +++|++++|+++.. .. ..+++++.+|+.++ +.+...+
T Consensus 12 ~~l~~~L~~~--~~~V~~~~R~~~~~------------------------~~-~~~~~~~~~d~~d~------~~~~~al 58 (183)
T PF13460_consen 12 RALAKQLLRR--GHEVTALVRSPSKA------------------------ED-SPGVEIIQGDLFDP------DSVKAAL 58 (183)
T ss_dssp HHHHHHHHHT--TSEEEEEESSGGGH------------------------HH-CTTEEEEESCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEecCchhc------------------------cc-ccccccceeeehhh------hhhhhhh
Confidence 3689999999 89999999974421 22 46999999999887 6899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|+|||+++.... +...+.+++++|++. +++++|++||.+++...... ......+
T Consensus 59 ~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~-~~~~~~~----------- 115 (183)
T PF13460_consen 59 KGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGL-FSDEDKP----------- 115 (183)
T ss_dssp TTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSE-EEGGTCG-----------
T ss_pred hhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeeeccccCCCCCcc-ccccccc-----------
Confidence 999999999986433 177889999999996 89999999999887642211 0000000
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
....|...|..+|+++... +++++++||+.++|.....
T Consensus 116 -----------------~~~~~~~~~~~~e~~~~~~---~~~~~ivrp~~~~~~~~~~---------------------- 153 (183)
T PF13460_consen 116 -----------------IFPEYARDKREAEEALRES---GLNWTIVRPGWIYGNPSRS---------------------- 153 (183)
T ss_dssp -----------------GGHHHHHHHHHHHHHHHHS---TSEEEEEEESEEEBTTSSS----------------------
T ss_pred -----------------chhhhHHHHHHHHHHHHhc---CCCEEEEECcEeEeCCCcc----------------------
Confidence 0157889999999888643 8999999999999965321
Q ss_pred eeeEecCCCcccCcchHHHHHHHHHHHhhh
Q psy7539 241 IRTMYCDYSTCADFLPVDVLVNGVLLSTWN 270 (318)
Q Consensus 241 ~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~ 270 (318)
.......+....++|+++|+|++++.++++
T Consensus 154 ~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 154 YRLIKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp EEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred eeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 011222556677999999999999998864
|
... |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.6e-16 Score=135.15 Aligned_cols=221 Identities=17% Similarity=0.110 Sum_probs=145.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+.. ++..+. .....++.++.+|++++ +++..++
T Consensus 16 ~~la~~L~~~--g~~v~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 67 (276)
T PRK06482 16 RGMTERLLAR--GDRVAATVRRPD------ALDDLK--------------ARYGDRLWVLQLDVTDS------AAVRAVV 67 (276)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------HhccCceEEEEccCCCH------HHHHHHH
Confidence 3688999988 899999999531 122111 11224788999999987 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++ ++ .+..+||++||..+...
T Consensus 68 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-~~~~~iv~~sS~~~~~~----- 141 (276)
T PRK06482 68 DRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRR-QGGGRIVQVSSEGGQIA----- 141 (276)
T ss_pred HHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCEEEEEcCcccccC-----
Confidence 3 58999999997532 2334568889999999999997 44 35679999999654221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc---cccc
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII---IPIW 215 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v---~G~~ 215 (318)
.++. +.|+.||++.|.+++.+.+ +|++++++|||.+ +|..
T Consensus 142 ----~~~~-----------------------------~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~ 188 (276)
T PRK06482 142 ----YPGF-----------------------------SLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG 188 (276)
T ss_pred ----CCCC-----------------------------chhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence 0111 7899999999999987764 4899999999987 4432
Q ss_pred CCCCCCcccCCC-chHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeH
Q psy7539 216 KDPLPGWTDNIN-GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITW 294 (318)
Q Consensus 216 ~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~ 294 (318)
.... .+..... .+...+...... +. ..-+.+++|++++++.++..+.. ...||++++ ...++
T Consensus 189 ~~~~-~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~d~~~~~~a~~~~~~~~~~-----~~~~~~g~~--~~~~~ 251 (276)
T PRK06482 189 LDRG-APLDAYDDTPVGDLRRALAD--------GS-FAIPGDPQKMVQAMIASADQTPA-----PRRLTLGSD--AYASI 251 (276)
T ss_pred cccc-CCCccccchhhHHHHHHHhh--------cc-CCCCCCHHHHHHHHHHHHcCCCC-----CeEEecChH--HHHHH
Confidence 1110 0000000 011112222211 11 11246889999999999976654 567999998 77788
Q ss_pred HHHHHHHHHhh
Q psy7539 295 YDIIENGKDIA 305 (318)
Q Consensus 295 ~el~~~i~~~~ 305 (318)
.++++.+.+..
T Consensus 252 ~~~~~~~~~~~ 262 (276)
T PRK06482 252 RAALSERLAAL 262 (276)
T ss_pred HHHHHHHHHHH
Confidence 87777665554
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-16 Score=130.67 Aligned_cols=251 Identities=17% Similarity=0.071 Sum_probs=177.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
.|.+-||++ |++|+.++|++++-+ ..|++.++..+- ......+..+.||++|. ..+.+++.
T Consensus 43 YLaEfLL~K--gYeVHGiiRRsSsFN-T~RIeHlY~nP~----------~h~~~~mkLHYgDmTDs------s~L~k~I~ 103 (376)
T KOG1372|consen 43 YLAEFLLSK--GYEVHGIIRRSSSFN-TARIEHLYSNPH----------THNGASMKLHYGDMTDS------SCLIKLIS 103 (376)
T ss_pred HHHHHHHhC--CceeeEEEeeccccc-hhhhhhhhcCch----------hcccceeEEeeccccch------HHHHHHHh
Confidence 567777877 999999999976554 568888776431 22345788999999987 57888877
Q ss_pred --CccEEEEcccccCcchhH---HHHHHHhHHHHHHHHHHHHhcC--CCccEEEEeccccccCC--cccccccCCCCCCh
Q psy7539 82 --TIHIVYHIAATVRFDDYM---QTYVFLNTRGTRDMLNLSKQMI--HLQLFVYVSTAYCHPKE--KVLEEKTYPPPVSP 152 (318)
Q Consensus 82 --~~d~Vih~Aa~~~~~~~~---~~~~~~Nv~gt~~ll~~a~~~~--~~~~~v~~SS~~~~~~~--~~~~E~~~~~p~~~ 152 (318)
+++-|+|+||.++..-+. +-..++...||.+||++.+... .--+|...||.--||.- .|..|..+-.|.
T Consensus 104 ~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPR-- 181 (376)
T KOG1372|consen 104 TIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPR-- 181 (376)
T ss_pred ccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCC--
Confidence 789999999986443221 2356677889999999988751 22478888887666642 366676655554
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
++|+.+|..+-.++-+|.+ +++-.| -|++| .+++|..|...-.....+
T Consensus 182 ---------------------------SPYa~aKmy~~WivvNyREAYnmfAc---NGILF-NHESPRRGenFVTRKItR 230 (376)
T KOG1372|consen 182 ---------------------------SPYAAAKMYGYWIVVNYREAYNMFAC---NGILF-NHESPRRGENFVTRKITR 230 (376)
T ss_pred ---------------------------ChhHHhhhhheEEEEEhHHhhcceee---ccEee-cCCCCccccchhhHHHHH
Confidence 8999999999988888877 554222 23333 355555542211112233
Q ss_pred HHHHHhcCcee-eEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 232 LLIGAGKGIIR-TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
-+..+..|++. ...++.+..+||-|..|.+.+++.+++++.+ .-|.|..+ +..+++||++......|..+-
T Consensus 231 svakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~P------dDfViATg--e~hsVrEF~~~aF~~ig~~l~ 302 (376)
T KOG1372|consen 231 SVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSP------DDFVIATG--EQHSVREFCNLAFAEIGEVLN 302 (376)
T ss_pred HHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCCC------CceEEecC--CcccHHHHHHHHHHhhCcEEe
Confidence 33333344433 4568899999999999999999999999874 68999999 899999999988777765444
Q ss_pred CC
Q psy7539 311 LN 312 (318)
Q Consensus 311 ~~ 312 (318)
++
T Consensus 303 We 304 (376)
T KOG1372|consen 303 WE 304 (376)
T ss_pred ec
Confidence 43
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-15 Score=131.75 Aligned_cols=218 Identities=14% Similarity=0.113 Sum_probs=140.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ +++|++++|+.+.. .+.. . ...+++++.+|+.+.. +.+...+
T Consensus 31 ~~l~~~L~~~--g~~V~~~~R~~~~~------~~~~--------------~-~~~~~~~~~~Dl~d~~-----~~l~~~~ 82 (251)
T PLN00141 31 KRIVEQLLAK--GFAVKAGVRDVDKA------KTSL--------------P-QDPSLQIVRADVTEGS-----DKLVEAI 82 (251)
T ss_pred HHHHHHHHhC--CCEEEEEecCHHHH------HHhc--------------c-cCCceEEEEeeCCCCH-----HHHHHHh
Confidence 3688899988 89999999964321 1110 1 1236889999998731 3565666
Q ss_pred -cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHH
Q psy7539 81 -ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKA 159 (318)
Q Consensus 81 -~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~ 159 (318)
.++|+|||+++......+. ..+++|+.++.++++++.+. ++++||++||.++++..... ...+... ..
T Consensus 83 ~~~~d~vi~~~g~~~~~~~~-~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v~g~~~~~----~~~~~~~--~~--- 151 (251)
T PLN00141 83 GDDSDAVICATGFRRSFDPF-APWKVDNFGTVNLVEACRKA-GVTRFILVSSILVNGAAMGQ----ILNPAYI--FL--- 151 (251)
T ss_pred hcCCCEEEECCCCCcCCCCC-CceeeehHHHHHHHHHHHHc-CCCEEEEEccccccCCCccc----ccCcchh--HH---
Confidence 6899999999864211211 23567999999999999984 88999999998877642110 0000000 00
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcC
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (318)
+....|..+|..+|+++... +++++++||+.+++.... +
T Consensus 152 -----------------~~~~~~~~~k~~~e~~l~~~---gi~~~iirpg~~~~~~~~---------------------~ 190 (251)
T PLN00141 152 -----------------NLFGLTLVAKLQAEKYIRKS---GINYTIVRPGGLTNDPPT---------------------G 190 (251)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHhc---CCcEEEEECCCccCCCCC---------------------c
Confidence 00033556788888887654 899999999988764211 0
Q ss_pred ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCC-ceeHHHHHHHHHH
Q psy7539 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF-QITWYDIIENGKD 303 (318)
Q Consensus 240 ~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~-~~~~~el~~~i~~ 303 (318)
.. .+.........+++.+|+|+++..++..+.. ...++.+.+.... ..++.+|+..+++
T Consensus 191 ~~-~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 191 NI-VMEPEDTLYEGSISRDQVAEVAVEALLCPES----SYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred eE-EECCCCccccCcccHHHHHHHHHHHhcChhh----cCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 10 1111111223579999999999999987664 2567777752113 3788998887764
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=123.84 Aligned_cols=206 Identities=17% Similarity=0.192 Sum_probs=153.4
Q ss_pred eccCCCCCCCCCHHHHHHHhc--CccEEEEcccccCcc----hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecccc
Q psy7539 61 NGDVAVPDLGISAEDRQMLSE--TIHIVYHIAATVRFD----DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYC 134 (318)
Q Consensus 61 ~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~Aa~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~ 134 (318)
..||++. ++.+.+++ ++.+|||+||.+..- ...-++++.|+.-.-|++..|-+. ++++++++.|...
T Consensus 38 d~DLt~~------a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCI 110 (315)
T KOG1431|consen 38 DADLTNL------ADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCI 110 (315)
T ss_pred cccccch------HHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceee
Confidence 4577765 56777776 789999999987322 233479999999999999999995 9999999999888
Q ss_pred ccCCc--ccccccC--CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEeccc
Q psy7539 135 HPKEK--VLEEKTY--PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPS 209 (318)
Q Consensus 135 ~~~~~--~~~E~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~ 209 (318)
+.... |++|.-. .+|.+.+ -+|+..|.++.-.-+.|.+ +|-.++..-|+
T Consensus 111 fPdkt~yPIdEtmvh~gpphpsN--------------------------~gYsyAKr~idv~n~aY~~qhg~~~tsviPt 164 (315)
T KOG1431|consen 111 FPDKTSYPIDETMVHNGPPHPSN--------------------------FGYSYAKRMIDVQNQAYRQQHGRDYTSVIPT 164 (315)
T ss_pred cCCCCCCCCCHHHhccCCCCCCc--------------------------hHHHHHHHHHHHHHHHHHHHhCCceeeeccc
Confidence 77633 7777432 1121111 5899999888877788887 89999999999
Q ss_pred ccccccCCCCCCcccCCCchHHHHHHHh----cCc-eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEe
Q psy7539 210 IIIPIWKDPLPGWTDNINGPTGLLIGAG----KGI-IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 284 (318)
Q Consensus 210 ~v~G~~~~~~~g~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni 284 (318)
++||+.++=.+. ++. -...++..+. .|. ...++|.|...|+|+|++|+|++++..+.+-.. .+-.++
T Consensus 165 NvfGphDNfnpe--~sH-VlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~-----vEpiil 236 (315)
T KOG1431|consen 165 NVFGPHDNFNPE--NSH-VLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEG-----VEPIIL 236 (315)
T ss_pred cccCCCCCCCcc--ccc-chHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcC-----ccceEe
Confidence 999987653221 111 1122333322 233 346889999999999999999999999988764 567888
Q ss_pred eCCCCCceeHHHHHHHHHHhhcc
Q psy7539 285 TANKDFQITWYDIIENGKDIARN 307 (318)
Q Consensus 285 ~~~~~~~~~~~el~~~i~~~~~~ 307 (318)
+.+....+|++|+++.+.+.+|.
T Consensus 237 s~ge~~EVtI~e~aeaV~ea~~F 259 (315)
T KOG1431|consen 237 SVGESDEVTIREAAEAVVEAVDF 259 (315)
T ss_pred ccCccceeEHHHHHHHHHHHhCC
Confidence 88744589999999999998854
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.3e-15 Score=145.63 Aligned_cols=186 Identities=16% Similarity=0.086 Sum_probs=132.4
Q ss_pred eEEEeccCCCCCCCCCHHHHHHHhc--CccEEEEcccccC---c---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEE
Q psy7539 57 VIPINGDVAVPDLGISAEDRQMLSE--TIHIVYHIAATVR---F---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVY 128 (318)
Q Consensus 57 i~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~Aa~~~---~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~ 128 (318)
+.+..+|++++ +.+...++ ++|+||||||.+. . ......++++|+.|+.+|+++|++. +++ +++
T Consensus 407 v~~~~~~l~d~------~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~ 478 (668)
T PLN02260 407 YEYGKGRLEDR------SSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMN 478 (668)
T ss_pred EEeeccccccH------HHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEE
Confidence 44456787765 45666665 7999999999863 2 1245678999999999999999996 775 677
Q ss_pred EeccccccCC--------cccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcC
Q psy7539 129 VSTAYCHPKE--------KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAG 200 (318)
Q Consensus 129 ~SS~~~~~~~--------~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 200 (318)
+||.++++.. .+++|+..+.|. .+.|+.||+++|+++..+.
T Consensus 479 ~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~----------------------------~~~Yg~sK~~~E~~~~~~~--- 527 (668)
T PLN02260 479 FATGCIFEYDAKHPEGSGIGFKEEDKPNFT----------------------------GSFYSKTKAMVEELLREYD--- 527 (668)
T ss_pred EcccceecCCcccccccCCCCCcCCCCCCC----------------------------CChhhHHHHHHHHHHHhhh---
Confidence 7887766431 145554332221 1899999999999998873
Q ss_pred CcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCc
Q psy7539 201 MPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMR 280 (318)
Q Consensus 201 ~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~ 280 (318)
+..++|+.++||... .++..|+..+++....... +.+..+++|++.+++.++.... ++
T Consensus 528 -~~~~~r~~~~~~~~~----------~~~~nfv~~~~~~~~~~~v-----p~~~~~~~~~~~~~~~l~~~~~------~g 585 (668)
T PLN02260 528 -NVCTLRVRMPISSDL----------SNPRNFITKISRYNKVVNI-----PNSMTVLDELLPISIEMAKRNL------RG 585 (668)
T ss_pred -hheEEEEEEecccCC----------CCccHHHHHHhccceeecc-----CCCceehhhHHHHHHHHHHhCC------Cc
Confidence 467788888886321 1234566666664332111 2357788999998888876422 58
Q ss_pred EEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 281 VINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 281 ~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
+||++++ ..+|+.|+++.+++..
T Consensus 586 iyni~~~--~~~s~~e~a~~i~~~~ 608 (668)
T PLN02260 586 IWNFTNP--GVVSHNEILEMYKDYI 608 (668)
T ss_pred eEEecCC--CcCcHHHHHHHHHHhc
Confidence 9999999 8999999999998876
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-14 Score=126.40 Aligned_cols=213 Identities=14% Similarity=0.115 Sum_probs=137.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+... ..+....+ .....++.++.+|++++ +.+..++
T Consensus 21 ~~la~~l~~~--G~~v~~~~r~~~~--~~~~~~~~---------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 75 (262)
T PRK13394 21 KEIALELARA--GAAVAIADLNQDG--ANAVADEI---------------NKAGGKAIGVAMDVTNE------DAVNAGI 75 (262)
T ss_pred HHHHHHHHHC--CCeEEEEeCChHH--HHHHHHHH---------------HhcCceEEEEECCCCCH------HHHHHHH
Confidence 3688999988 9999999886421 11111111 11124678899999986 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHH----HHHHHHHH-HhcCCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRG----TRDMLNLS-KQMIHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~g----t~~ll~~a-~~~~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|+|||+||.... ...++..+++|+.+ +.++++++ +. .+.++||++||.+.....
T Consensus 76 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~~~~iv~~ss~~~~~~~--- 151 (262)
T PRK13394 76 DKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD-DRGGVVIYMGSVHSHEAS--- 151 (262)
T ss_pred HHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh-cCCcEEEEEcchhhcCCC---
Confidence 3 48999999997432 12345678899999 77777877 55 367899999997553210
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
++. ..|+.+|.+.+.+++.+.+ .+++++++||+.++++...
T Consensus 152 ------~~~-----------------------------~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~ 196 (262)
T PRK13394 152 ------PLK-----------------------------SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD 196 (262)
T ss_pred ------CCC-----------------------------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh
Confidence 111 7899999999988877765 4799999999988875321
Q ss_pred CC-CCcccCCC-chHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PL-PGWTDNIN-GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~-~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. +....... ........ ++..+....+|++++|++++++.++...... ..+..|++.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~--~~g~~~~~~~g 258 (262)
T PRK13394 197 KQIPEQAKELGISEEEVVKK--------VMLGKTVDGVFTTVEDVAQTVLFLSSFPSAA--LTGQSFVVSHG 258 (262)
T ss_pred hhhHhhhhccCCChHHHHHH--------HHhcCCCCCCCCCHHHHHHHHHHHcCccccC--CcCCEEeeCCc
Confidence 00 00000000 00011111 1223445678999999999999998765321 23678988876
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.62 E-value=3e-14 Score=123.63 Aligned_cols=208 Identities=12% Similarity=0.083 Sum_probs=136.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH-
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML- 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~- 79 (318)
++|++.|+++ |++|+++.|+.. ..+.+.+.+ .....+++++.+|+.++ +++..+
T Consensus 15 ~~l~~~l~~~--g~~v~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 69 (255)
T TIGR01963 15 LAIALALAAA--GANVVVNDLGEA---GAEAAAKVA--------------TDAGGSVIYLVADVTKE------DEIADMI 69 (255)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCceEEEECCCCCH------HHHHHHH
Confidence 3688999988 899999999632 122222211 11124688999999986 444433
Q ss_pred ------hcCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 80 ------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 80 ------~~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+.++|+|||+|+.... ...++..++.|+.|+..+++++ ++ .+.++||++||...+...
T Consensus 70 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~~~~~~v~~ss~~~~~~~---- 144 (255)
T TIGR01963 70 AAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKK-QGWGRIINIASAHGLVAS---- 144 (255)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCeEEEEEcchhhcCCC----
Confidence 3468999999997432 1234567889999988888876 44 367899999997554321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.+|.+.|.++..+.. .+++++++||+.++++....
T Consensus 145 ------~----------------------------~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~ 190 (255)
T TIGR01963 145 ------P----------------------------FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK 190 (255)
T ss_pred ------C----------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH
Confidence 0 017899999999988876654 48999999999887743110
Q ss_pred CCCcccCCCchHHHHHHHhcCce-e------eEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGII-R------TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+........ . .....+.+.+++++++|+|++++.++...... ..++.|+++++
T Consensus 191 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~--~~g~~~~~~~g 251 (255)
T TIGR01963 191 -------------QIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAG--ITGQAIVLDGG 251 (255)
T ss_pred -------------HHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccC--ccceEEEEcCc
Confidence 0110000000 0 00112345678999999999999999764221 13678999877
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-13 Score=119.27 Aligned_cols=210 Identities=8% Similarity=-0.013 Sum_probs=132.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+.+...++ ......+.++.+|+++. +++..++
T Consensus 20 ~~l~~~l~~~--g~~v~~~~r~~~~--~~~~~~~~~~-------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 76 (249)
T PRK09135 20 AAIARTLHAA--GYRVAIHYHRSAA--EADALAAELN-------------ALRPGSAAALQADLLDP------DALPELV 76 (249)
T ss_pred HHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHH-------------hhcCCceEEEEcCCCCH------HHHHHHH
Confidence 4788999988 9999999986321 1111111110 11123688999999986 4666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|+|||+||.... .......+++|+.|+.++++++... ..-..++++|+....
T Consensus 77 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------- 147 (249)
T PRK09135 77 AACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE--------- 147 (249)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc---------
Confidence 4 57999999996321 1334568999999999999999642 122345666553321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
.+..|. +.|+.||.++|.++..+.+ .+++++++||+.++|+....
T Consensus 148 ~~~~~~-----------------------------~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~--- 195 (249)
T PRK09135 148 RPLKGY-----------------------------PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN--- 195 (249)
T ss_pred CCCCCc-----------------------------hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc---
Confidence 111121 7899999999999998876 36899999999999865321
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
.+ +.........+.. ..-+.+++|+|+++..++..... ..+.+||++++ ..++
T Consensus 196 ---~~--~~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~~~~~~~~---~~g~~~~i~~g--~~~~ 248 (249)
T PRK09135 196 ---SF--DEEARQAILARTP---------LKRIGTPEDIAEAVRFLLADASF---ITGQILAVDGG--RSLT 248 (249)
T ss_pred ---cC--CHHHHHHHHhcCC---------cCCCcCHHHHHHHHHHHcCcccc---ccCcEEEECCC--eecc
Confidence 11 1112222222111 11223589999999666543221 14789999998 5443
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.7e-14 Score=122.71 Aligned_cols=223 Identities=12% Similarity=0.043 Sum_probs=143.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... .+.+. .....++.++.+|++++ +++..++
T Consensus 17 ~~~a~~l~~~--g~~V~~~~r~~~~---~~~~~-----------------~~~~~~~~~~~~D~~~~------~~~~~~~ 68 (275)
T PRK08263 17 RAWTEAALER--GDRVVATARDTAT---LADLA-----------------EKYGDRLLPLALDVTDR------AAVFAAV 68 (275)
T ss_pred HHHHHHHHHC--CCEEEEEECCHHH---HHHHH-----------------HhccCCeeEEEccCCCH------HHHHHHH
Confidence 3688899888 8999999995321 11111 11124678889999886 4555443
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... ...++..+++|+.++..+++++ ++ .+.+++|++||..++....
T Consensus 69 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~--- 144 (275)
T PRK08263 69 ETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLRE-QRSGHIIQISSIGGISAFP--- 144 (275)
T ss_pred HHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCEEEEEcChhhcCCCC---
Confidence 3 57999999997532 1345678999999998888776 34 2567999999976643210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
. ...|+.+|.+.+.+...+.. .|++++++|||.+.......
T Consensus 145 ------~-----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~ 189 (275)
T PRK08263 145 ------M-----------------------------SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGT 189 (275)
T ss_pred ------C-----------------------------ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCcccc
Confidence 0 16899999999988877654 58999999999886543211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCc-chHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHH
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADF-LPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 297 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el 297 (318)
........ ....-+.... ........+ +..+|++++++.++..+.. ..+.|+...+ .++++.++
T Consensus 190 ~~~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~p~dva~~~~~l~~~~~~----~~~~~~~~~~--~~~~~~~~ 254 (275)
T PRK08263 190 SAKRATPL-DAYDTLREEL--------AEQWSERSVDGDPEAAAEALLKLVDAENP----PLRLFLGSGV--LDLAKADY 254 (275)
T ss_pred ccccCCCc-hhhhhHHHHH--------HHHHHhccCCCCHHHHHHHHHHHHcCCCC----CeEEEeCchH--HHHHHHHH
Confidence 00000000 0000010001 011112244 8899999999999988765 2444444444 57889999
Q ss_pred HHHHHHhh
Q psy7539 298 IENGKDIA 305 (318)
Q Consensus 298 ~~~i~~~~ 305 (318)
.+.+.++-
T Consensus 255 ~~~~~~~~ 262 (275)
T PRK08263 255 ERRLATWE 262 (275)
T ss_pred HHHHHHHH
Confidence 99888754
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.3e-14 Score=124.55 Aligned_cols=219 Identities=10% Similarity=0.018 Sum_probs=136.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH--
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM-- 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~-- 78 (318)
++|++.|+++ |++|+++.|+.+.. +.+.+.... .....+++++.+|++++ +++..
T Consensus 17 ~~la~~l~~~--G~~V~~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~~~~D~~d~------~~~~~~~ 73 (280)
T PRK06914 17 LLTTLELAKK--GYLVIATMRNPEKQ---ENLLSQATQ------------LNLQQNIKVQQLDVTDQ------NSIHNFQ 73 (280)
T ss_pred HHHHHHHHhC--CCEEEEEeCCHHHH---HHHHHHHHh------------cCCCCceeEEecCCCCH------HHHHHHH
Confidence 3688899988 99999999863221 112111000 11124789999999987 44443
Q ss_pred -Hh---cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCccccc
Q psy7539 79 -LS---ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 79 -~~---~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+. .++|+|||+||.... ...+...+++|+.|+.++++++ ++ .+..+||++||..+....
T Consensus 74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~vsS~~~~~~~----- 147 (280)
T PRK06914 74 LVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRK-QKSGKIINISSISGRVGF----- 147 (280)
T ss_pred HHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCEEEEECcccccCCC-----
Confidence 21 357999999997432 1334567889999998888885 44 256789999996543211
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.+|.+.|.+++.+.. +|++++++|||.+.++.....
T Consensus 148 ----~~-----------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~ 194 (280)
T PRK06914 148 ----PG-----------------------------LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVG 194 (280)
T ss_pred ----CC-----------------------------CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhcc
Confidence 01 17899999999998887752 689999999998876532110
Q ss_pred CCccc-CCC--ch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHH
Q psy7539 220 PGWTD-NIN--GP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 295 (318)
Q Consensus 220 ~g~~~-~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~ 295 (318)
..... ... .+ ...+..... . + ......+++++|+|++++.++.++.. ...|+++++ ..+++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~-~---~---~~~~~~~~~~~dva~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~ 260 (280)
T PRK06914 195 KQLAENQSETTSPYKEYMKKIQK-H---I---NSGSDTFGNPIDVANLIVEIAESKRP-----KLRYPIGKG--VKLMIL 260 (280)
T ss_pred ccccccccccccchHHHHHHHHH-H---H---hhhhhccCCHHHHHHHHHHHHcCCCC-----CcccccCCc--hHHHHH
Confidence 00000 000 00 001111110 0 0 01234678999999999999988765 457999877 555444
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.7e-13 Score=116.40 Aligned_cols=206 Identities=12% Similarity=0.040 Sum_probs=137.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|++++|+.+. ..+....+ .....++.++.+|++++ +++..++
T Consensus 20 ~~l~~~l~~~--g~~V~~~~r~~~~--~~~~~~~l---------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 74 (251)
T PRK12826 20 RAIAVRLAAD--GAEVIVVDICGDD--AAATAELV---------------EAAGGKARARQVDVRDR------AALKAAV 74 (251)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHH---------------HhcCCeEEEEECCCCCH------HHHHHHH
Confidence 3688999988 8999999996321 11111111 11124588999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...+...++.|+.++.++++++... .+.++||++||..++...
T Consensus 75 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~----- 149 (251)
T PRK12826 75 AAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG----- 149 (251)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC-----
Confidence 4 68999999987543 1234568999999999999887421 256789999997664110
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
..+ ...|+.+|.+.+.++..+.. .+++++++||+.++|+...+.
T Consensus 150 ---~~~-----------------------------~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~ 197 (251)
T PRK12826 150 ---YPG-----------------------------LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL 197 (251)
T ss_pred ---CCC-----------------------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhc
Confidence 000 16899999999999988754 489999999999988542211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....+...+.... ....+++++|+|.++..++...... ..++.|++.++
T Consensus 198 --------~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~--~~g~~~~~~~g 246 (251)
T PRK12826 198 --------GDAQWAEAIAAAI---------PLGRLGEPEDIAAAVLFLASDEARY--ITGQTLPVDGG 246 (251)
T ss_pred --------CchHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccC--cCCcEEEECCC
Confidence 1111111111110 1126899999999999988654321 14789999876
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-13 Score=119.61 Aligned_cols=205 Identities=14% Similarity=0.113 Sum_probs=132.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... .+.+... + .....+++++.+|++++ +++..++
T Consensus 24 ~~la~~L~~~--G~~V~~~~r~~~~---~~~~~~~--------~------~~~~~~~~~~~~Dl~~~------~~~~~~~ 78 (274)
T PRK07775 24 AATAIELAAA--GFPVALGARRVEK---CEELVDK--------I------RADGGEAVAFPLDVTDP------DSVKSFV 78 (274)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHH--------H------HhcCCeEEEEECCCCCH------HHHHHHH
Confidence 4789999988 9999999885321 1111110 0 11124688899999986 4666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...+...+++|+.++.++++++... .+..+||++||..++....
T Consensus 79 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~---- 154 (274)
T PRK07775 79 AQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP---- 154 (274)
T ss_pred HHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC----
Confidence 4 57999999997432 1234567899999999999887531 2445799999976643210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
+ ...|+.+|.+.|.++..+.. .|++++++|||.+.+......
T Consensus 155 -----~-----------------------------~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~ 200 (274)
T PRK07775 155 -----H-----------------------------MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSL 200 (274)
T ss_pred -----C-----------------------------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccC
Confidence 0 16899999999999988765 389999999997754321100
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEee
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 285 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~ 285 (318)
.......++...... .+.....+++++|+|++++.++.++.. +.+||+.
T Consensus 201 -----~~~~~~~~~~~~~~~-------~~~~~~~~~~~~dva~a~~~~~~~~~~-----~~~~~~~ 249 (274)
T PRK07775 201 -----PAEVIGPMLEDWAKW-------GQARHDYFLRASDLARAITFVAETPRG-----AHVVNME 249 (274)
T ss_pred -----ChhhhhHHHHHHHHh-------cccccccccCHHHHHHHHHHHhcCCCC-----CCeeEEe
Confidence 000001111111110 122345699999999999999987542 5677775
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-13 Score=119.48 Aligned_cols=213 Identities=11% Similarity=0.012 Sum_probs=133.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... .+.+...+ .....+++++.+|++++ +++..++
T Consensus 18 ~~la~~l~~~--g~~v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 72 (258)
T PRK12429 18 LEIALALAKE--GAKVVIADLNDEA---AAAAAEAL--------------QKAGGKAIGVAMDVTDE------EAINAGI 72 (258)
T ss_pred HHHHHHHHHC--CCeEEEEeCCHHH---HHHHHHHH--------------HhcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3789999988 9999999996432 11221111 11235788999999986 4565554
Q ss_pred c-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHH----HHHHHHhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRD----MLNLSKQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~----ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||..... ......+++|+.++.+ ++.++++ .+.++||++||........
T Consensus 73 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~iss~~~~~~~~--- 148 (258)
T PRK12429 73 DYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKA-QGGGRIINMASVHGLVGSA--- 148 (258)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh-cCCeEEEEEcchhhccCCC---
Confidence 4 689999999964321 2344578889999544 4455555 3678999999976543210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+ ...|+.+|.+.+.+...+.. .++.+.++||+.+.++...+
T Consensus 149 ------~-----------------------------~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~ 193 (258)
T PRK12429 149 ------G-----------------------------KAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK 193 (258)
T ss_pred ------C-----------------------------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh
Confidence 1 17899999999988876644 47899999999887743211
Q ss_pred CC-CcccCCC-chHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LP-GWTDNIN-GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~-g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .-..... ......... .........+++++|+|+++..++...... ..++.|++.++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~--~~g~~~~~~~g 254 (258)
T PRK12429 194 QIPDLAKERGISEEEVLEDV--------LLPLVPQKRFTTVEEIADYALFLASFAAKG--VTGQAWVVDGG 254 (258)
T ss_pred hhhhhccccCCChHHHHHHH--------HhccCCccccCCHHHHHHHHHHHcCccccC--ccCCeEEeCCC
Confidence 00 0000000 000011111 112233467999999999999998764321 13678988876
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.3e-13 Score=126.92 Aligned_cols=228 Identities=11% Similarity=0.072 Sum_probs=143.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+... .+.+.+.+...... . .+ .....+++++.+|+.+. +++...+
T Consensus 94 ~aLAr~LLk~--G~~Vval~Rn~ek---l~~l~~~l~~~~L~---~-~G-a~~~~~v~iV~gDLtD~------esI~~aL 157 (576)
T PLN03209 94 SRTVRELLKL--GFRVRAGVRSAQR---AESLVQSVKQMKLD---V-EG-TQPVEKLEIVECDLEKP------DQIGPAL 157 (576)
T ss_pred HHHHHHHHHC--CCeEEEEeCCHHH---HHHHHHHhhhhccc---c-cc-ccccCceEEEEecCCCH------HHHHHHh
Confidence 4789999988 9999999996432 12222111100000 0 00 01124689999999876 5788888
Q ss_pred cCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHH
Q psy7539 81 ETIHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKA 159 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~ 159 (318)
.++|+|||+||..... ......+++|+.|+.+++++|.+. ++++||++||.++.... ..+.. . .
T Consensus 158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~~~g--~p~~~----~--~------ 222 (576)
T PLN03209 158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTNKVG--FPAAI----L--N------ 222 (576)
T ss_pred cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhcccC--ccccc----h--h------
Confidence 9999999999875321 123456789999999999999985 88999999998653111 00000 0 0
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcC
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (318)
....|..+|..+|+.+... |++++++|||.+.+..... .. .+
T Consensus 223 ------------------sk~~~~~~KraaE~~L~~s---GIrvTIVRPG~L~tp~d~~--------~~---------t~ 264 (576)
T PLN03209 223 ------------------LFWGVLCWKRKAEEALIAS---GLPYTIVRPGGMERPTDAY--------KE---------TH 264 (576)
T ss_pred ------------------hHHHHHHHHHHHHHHHHHc---CCCEEEEECCeecCCcccc--------cc---------cc
Confidence 0056888899999888754 8999999999887532110 00 00
Q ss_pred ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCC-ceeHHHHHHHH
Q psy7539 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF-QITWYDIIENG 301 (318)
Q Consensus 240 ~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~-~~~~~el~~~i 301 (318)
.......+ ....-.+..+|||++++.++.++... .+++|.+.++... ..++.++++.+
T Consensus 265 ~v~~~~~d-~~~gr~isreDVA~vVvfLasd~~as---~~kvvevi~~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 265 NLTLSEED-TLFGGQVSNLQVAELMACMAKNRRLS---YCKVVEVIAETTAPLTPMEELLAKI 323 (576)
T ss_pred ceeecccc-ccCCCccCHHHHHHHHHHHHcCchhc---cceEEEEEeCCCCCCCCHHHHHHhc
Confidence 11111111 11123588999999999988865431 3789999987211 14555555544
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.8e-13 Score=117.25 Aligned_cols=210 Identities=12% Similarity=0.044 Sum_probs=132.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+... .+.+. .....++.++.+|++++ +++..++
T Consensus 18 ~~la~~l~~~--G~~V~~~~r~~~~---~~~l~-----------------~~~~~~~~~~~~D~~d~------~~~~~~~ 69 (277)
T PRK06180 18 RALAQAALAA--GHRVVGTVRSEAA---RADFE-----------------ALHPDRALARLLDVTDF------DAIDAVV 69 (277)
T ss_pred HHHHHHHHhC--cCEEEEEeCCHHH---HHHHH-----------------hhcCCCeeEEEccCCCH------HHHHHHH
Confidence 4688999988 9999999996321 11111 11234688899999986 4555554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..+....
T Consensus 70 ~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~----- 144 (277)
T PRK06180 70 ADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM----- 144 (277)
T ss_pred HHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC-----
Confidence 4 58999999997532 1234567899999999999985421 245689999997654321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
++. ..|+.+|.+.|.+++.+.. .|++++++|||.+.++.....
T Consensus 145 ----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~ 191 (277)
T PRK06180 145 ----PGI-----------------------------GYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRS 191 (277)
T ss_pred ----CCc-----------------------------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccc
Confidence 111 7899999999998877654 489999999999876532211
Q ss_pred C-CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 P-GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ............+....... .......+..++|+|++++.++..+.. ...|.++..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~dva~~~~~~l~~~~~-----~~~~~~g~~ 249 (277)
T PRK06180 192 MVRTPRSIADYDALFGPIRQAR------EAKSGKQPGDPAKAAQAILAAVESDEP-----PLHLLLGSD 249 (277)
T ss_pred cccCCCCcHhHHHHHHHHHHHH------HhhccCCCCCHHHHHHHHHHHHcCCCC-----CeeEeccHH
Confidence 0 00000000001111111100 001123456799999999999987664 344555544
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.3e-13 Score=115.66 Aligned_cols=204 Identities=16% Similarity=0.115 Sum_probs=136.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|+.. ...+.+.... .....+++++.+|++++ +.+..++
T Consensus 20 ~~l~~~l~~~--g~~v~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~v~~~~ 75 (249)
T PRK12825 20 RAIALRLARA--GADVVVHYRSDE--EAAEELVEAV--------------EALGRRAQAVQADVTDK------AALEAAV 75 (249)
T ss_pred HHHHHHHHHC--CCeEEEEeCCCH--HHHHHHHHHH--------------HhcCCceEEEECCcCCH------HHHHHHH
Confidence 3688999988 898888777532 1122222111 11235788999999886 4566554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...++.|+.++.++++.+. + .+.++||++||..++....
T Consensus 76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~i~~SS~~~~~~~~--- 151 (249)
T PRK12825 76 AAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRK-QRGGRIVNISSVAGLPGWP--- 151 (249)
T ss_pred HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCEEEEECccccCCCCC---
Confidence 3 67999999996422 22345688999999999998873 4 3678999999977653210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+ ...|+.+|.+.+.++..+.+ .+++++++||+.++|+....
T Consensus 152 ------~-----------------------------~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~ 196 (249)
T PRK12825 152 ------G-----------------------------RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEA 196 (249)
T ss_pred ------C-----------------------------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccc
Confidence 0 16899999999988876654 48999999999998864321
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .. ...... . . ......+++.+|+++++..++..... ...++.|+++++
T Consensus 197 ~-------~~-~~~~~~---~--~-----~~~~~~~~~~~dva~~~~~~~~~~~~--~~~g~~~~i~~g 245 (249)
T PRK12825 197 T-------IE-EAREAK---D--A-----ETPLGRSGTPEDIARAVAFLCSDASD--YITGQVIEVTGG 245 (249)
T ss_pred c-------cc-hhHHhh---h--c-----cCCCCCCcCHHHHHHHHHHHhCcccc--CcCCCEEEeCCC
Confidence 1 11 111111 0 0 01122389999999999999976432 124899999987
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-12 Score=115.56 Aligned_cols=223 Identities=17% Similarity=0.081 Sum_probs=143.8
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+... .+.+.+.+. . .....++.++.+|++++ +++..+++
T Consensus 22 ~la~~l~~~--G~~V~~~~r~~~~---~~~~~~~l~--------~----~~~~~~~~~~~~Dl~~~------~~~~~~~~ 78 (276)
T PRK05875 22 GVAAGLVAA--GAAVMIVGRNPDK---LAAAAEEIE--------A----LKGAGAVRYEPADVTDE------DQVARAVD 78 (276)
T ss_pred HHHHHHHHC--CCeEEEEeCCHHH---HHHHHHHHH--------h----ccCCCceEEEEcCCCCH------HHHHHHHH
Confidence 688899988 9999999985321 111111100 0 00124788999999886 45655554
Q ss_pred -------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 82 -------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
++|+|||+||.... ...+...+++|+.++..+++++.+. .+..+|+++||..+....
T Consensus 79 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~----- 153 (276)
T PRK05875 79 AATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH----- 153 (276)
T ss_pred HHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC-----
Confidence 68999999985321 1234567888999999999877542 133589999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
++ .+.|+.+|.+.|.+++.+.. .+++++++||+.+.+.....
T Consensus 154 ----~~-----------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~- 199 (276)
T PRK05875 154 ----RW-----------------------------FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP- 199 (276)
T ss_pred ----CC-----------------------------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc-
Confidence 11 17899999999999988765 47899999999885532211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCce----eHH
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQI----TWY 295 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~----~~~ 295 (318)
..........+... .....+++++|+|+++..++..+.. ...+.+|++.++ ..+ ++.
T Consensus 200 ------~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~g~~~~~~~g--~~~~~~~~~~ 260 (276)
T PRK05875 200 ------ITESPELSADYRAC---------TPLPRVGEVEDVANLAMFLLSDAAS--WITGQVINVDGG--HMLRRGPDFS 260 (276)
T ss_pred ------cccCHHHHHHHHcC---------CCCCCCcCHHHHHHHHHHHcCchhc--CcCCCEEEECCC--eeccCCccHH
Confidence 01111111111111 1123467899999999999977543 113789999887 554 677
Q ss_pred HHHHHHHHhh
Q psy7539 296 DIIENGKDIA 305 (318)
Q Consensus 296 el~~~i~~~~ 305 (318)
|+++.+....
T Consensus 261 ~~~~~~~~~~ 270 (276)
T PRK05875 261 SMLEPVFGAD 270 (276)
T ss_pred HHHHHHhhHH
Confidence 7777665443
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.5e-13 Score=114.41 Aligned_cols=204 Identities=15% Similarity=0.101 Sum_probs=133.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. . ..+.+.+. + .....++.++.+|++++ +.+..++
T Consensus 20 ~~la~~l~~~--g~~v~~~~~~~~-~-~~~~~~~~--------l------~~~~~~~~~~~~D~~~~------~~~~~~~ 75 (247)
T PRK12935 20 KAITVALAQE--GAKVVINYNSSK-E-AAENLVNE--------L------GKEGHDVYAVQADVSKV------EDANRLV 75 (247)
T ss_pred HHHHHHHHHc--CCEEEEEcCCcH-H-HHHHHHHH--------H------HhcCCeEEEEECCCCCH------HHHHHHH
Confidence 3688999988 898887655322 1 11111111 1 11124688999999986 4566555
Q ss_pred c-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||..... ..+.+.+++|+.++..+++++... ....+||++||.++....
T Consensus 76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----- 150 (247)
T PRK12935 76 EEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG----- 150 (247)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----
Confidence 4 379999999974321 345568899999999999988642 134689999997653221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+. ..|+.||.+.+.++..+.. .++++++++||.+.+....
T Consensus 151 ----~~~-----------------------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~-- 195 (247)
T PRK12935 151 ----FGQ-----------------------------TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA-- 195 (247)
T ss_pred ----CCC-----------------------------cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh--
Confidence 111 7899999999888776654 4899999999987543211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .+.........+ .....+.+++|++++++.++..... ..++.||+.++
T Consensus 196 -----~--~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~~~~~~~~---~~g~~~~i~~g 244 (247)
T PRK12935 196 -----E--VPEEVRQKIVAK---------IPKKRFGQADEIAKGVVYLCRDGAY---ITGQQLNINGG 244 (247)
T ss_pred -----h--ccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHHHcCcccC---ccCCEEEeCCC
Confidence 1 111111122111 1235689999999999998865421 13789999876
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5e-13 Score=115.77 Aligned_cols=207 Identities=11% Similarity=0.043 Sum_probs=132.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++..|+... ...+.+... .....++.++.+|++++ +++..++
T Consensus 20 ~~l~~~l~~~--g~~v~~~~~~~~~-~~~~~~~~~---------------~~~~~~~~~~~~D~~~~------~~~~~~~ 75 (252)
T PRK06077 20 RAIAVRLAKE--GSLVVVNAKKRAE-EMNETLKMV---------------KENGGEGIGVLADVSTR------EGCETLA 75 (252)
T ss_pred HHHHHHHHHC--CCEEEEEeCCChH-HHHHHHHHH---------------HHcCCeeEEEEeccCCH------HHHHHHH
Confidence 3688999988 8998887775321 111111111 11223677889999886 4555444
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ .+|+|||+||.... ....+..+++|+.++.++++++.+. ....+||++||..++...
T Consensus 76 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------- 148 (252)
T PRK06077 76 KATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA------- 148 (252)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC-------
Confidence 3 68999999996321 1223567899999999999988753 122579999997764321
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCCCc
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
.+. ..|+.+|.+.|.+++.+.+ .++.+.+++|+.+.+.......
T Consensus 149 --~~~-----------------------------~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~-- 195 (252)
T PRK06077 149 --YGL-----------------------------SIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLF-- 195 (252)
T ss_pred --CCc-----------------------------hHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhh--
Confidence 111 7899999999999998876 3688999999988653211000
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...+. ....... .......+++++|+|++++.++..... .+++|++.++
T Consensus 196 --~~~~~--~~~~~~~--------~~~~~~~~~~~~dva~~~~~~~~~~~~----~g~~~~i~~g 244 (252)
T PRK06077 196 --KVLGM--SEKEFAE--------KFTLMGKILDPEEVAEFVAAILKIESI----TGQVFVLDSG 244 (252)
T ss_pred --hcccc--cHHHHHH--------hcCcCCCCCCHHHHHHHHHHHhCcccc----CCCeEEecCC
Confidence 00000 0000000 111223689999999999999975543 3789999987
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.1e-13 Score=114.73 Aligned_cols=202 Identities=17% Similarity=0.124 Sum_probs=134.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|..+ ..+.+.+.+ .....++.++.+|+++. +++..++
T Consensus 20 ~~la~~l~~~--g~~vi~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 74 (250)
T PRK07774 20 QAYAEALARE--GASVVVADINAE---GAERVAKQI--------------VADGGTAIAVQVDVSDP------DSAKAMA 74 (250)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999988 899999999632 112222111 11123677889999986 4554444
Q ss_pred c-------CccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRF----------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~ 140 (318)
+ ++|+|||+||.... ...+...+++|+.++.++++++... .+.++||++||..++..
T Consensus 75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--- 151 (250)
T PRK07774 75 DATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY--- 151 (250)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC---
Confidence 3 68999999997421 1234567889999999999988753 13468999999776431
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
. +.|+.||.+.|.+++.+.+ .++++++++||.+.....
T Consensus 152 ---------~-----------------------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 193 (250)
T PRK07774 152 ---------S-----------------------------NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEAT 193 (250)
T ss_pred ---------c-----------------------------cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccc
Confidence 1 7899999999999988765 378999999997755332
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . .+..+.....++.. ..-+.+++|+|++++.++...... ..+++||+.++
T Consensus 194 ~~-------~-~~~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~~~~~~~~~--~~g~~~~v~~g 245 (250)
T PRK07774 194 RT-------V-TPKEFVADMVKGIP---------LSRMGTPEDLVGMCLFLLSDEASW--ITGQIFNVDGG 245 (250)
T ss_pred cc-------c-CCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhChhhhC--cCCCEEEECCC
Confidence 11 1 12223333333211 112457899999999988764310 13789999987
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-13 Score=119.70 Aligned_cols=209 Identities=13% Similarity=0.101 Sum_probs=136.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. ..+.+. .....++.++.+|++++ +++..++
T Consensus 20 ~~ia~~l~~~--G~~v~~~~r~~~---~~~~~~-----------------~~~~~~~~~~~~D~~~~------~~~~~~~ 71 (257)
T PRK07067 20 EAVAERYLAE--GARVVIADIKPA---RARLAA-----------------LEIGPAAIAVSLDVTRQ------DSIDRIV 71 (257)
T ss_pred HHHHHHHHHc--CCEEEEEcCCHH---HHHHHH-----------------HHhCCceEEEEccCCCH------HHHHHHH
Confidence 3688999998 999999988532 111221 11224688899999886 4565554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcC----CCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMI----HLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~----~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|++||+||.... ...++..+++|+.++.++++++...- .-.+||++||.......
T Consensus 72 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 147 (257)
T PRK07067 72 AAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE---- 147 (257)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC----
Confidence 4 58999999997532 23456789999999999999986420 12479999996542210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+. ..|+.||.+.+.+.+.+.. +|+++++++||.+.++....
T Consensus 148 -----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~ 193 (257)
T PRK07067 148 -----ALV-----------------------------SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ 193 (257)
T ss_pred -----CCC-----------------------------chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh
Confidence 111 7899999999988877654 68999999999997743211
Q ss_pred CCCcccCCCchHHHHHHHhc---CceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGK---GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ...+..... +......+.+.....+.+.+|+|+++..++...... ..+.+|++.++
T Consensus 194 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~--~~g~~~~v~gg 253 (257)
T PRK07067 194 V----------DALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADY--IVAQTYNVDGG 253 (257)
T ss_pred h----------hhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCccccc--ccCcEEeecCC
Confidence 0 000000000 000011122334567999999999999998764321 24789999887
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-12 Score=113.23 Aligned_cols=206 Identities=15% Similarity=0.112 Sum_probs=134.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|..... .+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 16 ~~la~~L~~~--g~~vi~~~r~~~~~--~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 71 (256)
T PRK12745 16 LGIARALAAA--GFDLAINDRPDDEE--LAATQQEL--------------RALGVEVIFFPADVADL------SAHEAML 71 (256)
T ss_pred HHHHHHHHHC--CCEEEEEecCchhH--HHHHHHHH--------------HhcCCceEEEEecCCCH------HHHHHHH
Confidence 3688999988 89999999863321 11111111 11124788999999986 4555443
Q ss_pred c-------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc----CC-----CccEEEEeccccc
Q psy7539 81 E-------TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM----IH-----LQLFVYVSTAYCH 135 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~-----~~~~v~~SS~~~~ 135 (318)
+ .+|+|||+||.... ...++..+++|+.++.++++++.+. .+ ..+||++||..+.
T Consensus 72 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 151 (256)
T PRK12745 72 DAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI 151 (256)
T ss_pred HHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc
Confidence 3 68999999997421 1345668999999999998887542 11 4679999997654
Q ss_pred cCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 136 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
.... + ...|+.+|.+.|.+++.+.. +|++++++|||.+
T Consensus 152 ~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v 193 (256)
T PRK12745 152 MVSP---------N-----------------------------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLI 193 (256)
T ss_pred cCCC---------C-----------------------------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCC
Confidence 3210 1 17899999999999888764 5899999999988
Q ss_pred ccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 212 IPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 212 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+....+. ...+......+. .....+.+.+|+++++..++..... ...+..|++.++
T Consensus 194 ~t~~~~~~---------~~~~~~~~~~~~--------~~~~~~~~~~d~a~~i~~l~~~~~~--~~~G~~~~i~gg 250 (256)
T PRK12745 194 KTDMTAPV---------TAKYDALIAKGL--------VPMPRWGEPEDVARAVAALASGDLP--YSTGQAIHVDGG 250 (256)
T ss_pred cCcccccc---------chhHHhhhhhcC--------CCcCCCcCHHHHHHHHHHHhCCccc--ccCCCEEEECCC
Confidence 76432110 011111111111 1123577999999999988865432 123789999876
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.52 E-value=5e-14 Score=120.87 Aligned_cols=216 Identities=15% Similarity=0.158 Sum_probs=141.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|++. +++|.+++|+.+.. +..++ ....++++.+|+.++ +.+.+++
T Consensus 12 ~~v~~~L~~~--~~~V~~l~R~~~~~----~~~~l-----------------~~~g~~vv~~d~~~~------~~l~~al 62 (233)
T PF05368_consen 12 RSVVRALLSA--GFSVRALVRDPSSD----RAQQL-----------------QALGAEVVEADYDDP------ESLVAAL 62 (233)
T ss_dssp HHHHHHHHHT--TGCEEEEESSSHHH----HHHHH-----------------HHTTTEEEES-TT-H------HHHHHHH
T ss_pred HHHHHHHHhC--CCCcEEEEeccchh----hhhhh-----------------hcccceEeecccCCH------HHHHHHH
Confidence 3688999987 99999999975211 11111 113567889999876 7899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|.||.+.+... ..-+....+++++|++. ++++||+.|....+.... ...|.
T Consensus 63 ~g~d~v~~~~~~~~---------~~~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~~------~~~p~---------- 116 (233)
T PF05368_consen 63 KGVDAVFSVTPPSH---------PSELEQQKNLIDAAKAA-GVKHFVPSSFGADYDESS------GSEPE---------- 116 (233)
T ss_dssp TTCSEEEEESSCSC---------CCHHHHHHHHHHHHHHH-T-SEEEESEESSGTTTTT------TSTTH----------
T ss_pred cCCceEEeecCcch---------hhhhhhhhhHHHhhhcc-ccceEEEEEecccccccc------ccccc----------
Confidence 99999998887543 11244567899999997 799999655433321100 00010
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
...-..|...|+.+++. +++++++|+|+.+.....+... ........
T Consensus 117 -------------------~~~~~~k~~ie~~l~~~---~i~~t~i~~g~f~e~~~~~~~~-----------~~~~~~~~ 163 (233)
T PF05368_consen 117 -------------------IPHFDQKAEIEEYLRES---GIPYTIIRPGFFMENLLPPFAP-----------VVDIKKSK 163 (233)
T ss_dssp -------------------HHHHHHHHHHHHHHHHC---TSEBEEEEE-EEHHHHHTTTHH-----------TTCSCCTS
T ss_pred -------------------chhhhhhhhhhhhhhhc---cccceeccccchhhhhhhhhcc-----------cccccccc
Confidence 33445788888888776 8999999999665432211100 00011111
Q ss_pred -eeeEecCCCcccCcc-hHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 241 -IRTMYCDYSTCADFL-PVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 241 -~~~~~~~~~~~~~~v-~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
...++++++....++ +.+|+++++..++..+... ..+..+.++++ .+|+.|+++.+.+..|.++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~--~~~~~~~~~~~---~~t~~eia~~~s~~~G~~v 229 (233)
T PF05368_consen 164 DVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKH--NNGKTIFLAGE---TLTYNEIAAILSKVLGKKV 229 (233)
T ss_dssp SEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGT--TEEEEEEEGGG---EEEHHHHHHHHHHHHTSEE
T ss_pred eEEEEccCCCccccccccHHHHHHHHHHHHcChHHh--cCCEEEEeCCC---CCCHHHHHHHHHHHHCCcc
Confidence 235667777777775 9999999999999886541 13577887765 7999999999999997663
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-13 Score=118.55 Aligned_cols=210 Identities=11% Similarity=0.064 Sum_probs=133.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.+. ..+.+...+ .....++.++.+|++++ +++..++
T Consensus 20 ~~l~~~l~~~--G~~V~~~~r~~~~--~~~~~~~~l--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 75 (248)
T PRK07806 20 ADTAKILAGA--GAHVVVNYRQKAP--RANKVVAEI--------------EAAGGRASAVGADLTDE------ESVAALM 75 (248)
T ss_pred HHHHHHHHHC--CCEEEEEeCCchH--hHHHHHHHH--------------HhcCCceEEEEcCCCCH------HHHHHHH
Confidence 3688999988 9999999986431 112222111 11124678899999987 4555544
Q ss_pred c-------CccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCCCCC
Q psy7539 81 E-------TIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVS 151 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~ 151 (318)
+ ++|+|||+||.... .......+++|+.|+.++++++.+. ....++|++||..+..... .+ ..|.
T Consensus 76 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~--~~---~~~~- 149 (248)
T PRK07806 76 DTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT--VK---TMPE- 149 (248)
T ss_pred HHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc--cc---CCcc-
Confidence 3 58999999986421 2234457889999999999999863 1234899999954321100 00 0010
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccCCC
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNIN 227 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~~ 227 (318)
...|+.||.+.|.+++.+.. .++++++++|+.+-+....... ...
T Consensus 150 ---------------------------~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~---~~~- 198 (248)
T PRK07806 150 ---------------------------YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLL---NRL- 198 (248)
T ss_pred ---------------------------ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhh---ccC-
Confidence 17899999999999988754 5788999998865432110000 000
Q ss_pred chHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 228 GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+. .+. . .......+++++|+|++++.++..... .+.+|+++++
T Consensus 199 ~~~-~~~----~-------~~~~~~~~~~~~dva~~~~~l~~~~~~----~g~~~~i~~~ 242 (248)
T PRK07806 199 NPG-AIE----A-------RREAAGKLYTVSEFAAEVARAVTAPVP----SGHIEYVGGA 242 (248)
T ss_pred CHH-HHH----H-------HHhhhcccCCHHHHHHHHHHHhhcccc----CccEEEecCc
Confidence 000 000 0 000123799999999999999986544 4889999988
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2e-12 Score=112.44 Aligned_cols=217 Identities=10% Similarity=0.025 Sum_probs=143.3
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |.+|+++.|+... .+.+.+. ....+++++.+|+.++ +++..+++
T Consensus 17 ~la~~L~~~--g~~v~~~~r~~~~---~~~~~~~----------------~~~~~~~~~~~D~~~~------~~~~~~~~ 69 (257)
T PRK07074 17 ALARRFLAA--GDRVLALDIDAAA---LAAFADA----------------LGDARFVPVACDLTDA------ASLAAALA 69 (257)
T ss_pred HHHHHHHHC--CCEEEEEeCCHHH---HHHHHHH----------------hcCCceEEEEecCCCH------HHHHHHHH
Confidence 688899887 8999999985321 1111110 1123688999999886 45655443
Q ss_pred -------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
++|+|||+||..... ..+...++.|+.++.++++++... .+..+||++||........
T Consensus 70 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----- 144 (257)
T PRK07074 70 NAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALG----- 144 (257)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCC-----
Confidence 489999999974221 223456778999999998887431 2456899999965422100
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
...|+.+|.+.+.++..+.+ .|++++++|||.+.+.....
T Consensus 145 ----------------------------------~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~-- 188 (257)
T PRK07074 145 ----------------------------------HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEA-- 188 (257)
T ss_pred ----------------------------------CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhc--
Confidence 06799999999999988875 47999999999886642110
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHH
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 300 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~ 300 (318)
.......+...... .....+|++++|++.+++.++...... ..+..+++.++ .....+|+++.
T Consensus 189 ----~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~~~~~--~~g~~~~~~~g--~~~~~~~~~~~ 251 (257)
T PRK07074 189 ----RVAANPQVFEELKK---------WYPLQDFATPDDVANAVLFLASPAARA--ITGVCLPVDGG--LTAGNREMART 251 (257)
T ss_pred ----ccccChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCchhcC--cCCcEEEeCCC--cCcCChhhhhh
Confidence 00011111111111 112358999999999999999643221 13778889888 77889999887
Q ss_pred HHH
Q psy7539 301 GKD 303 (318)
Q Consensus 301 i~~ 303 (318)
+.+
T Consensus 252 ~~~ 254 (257)
T PRK07074 252 LTL 254 (257)
T ss_pred hcc
Confidence 754
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.2e-12 Score=113.53 Aligned_cols=198 Identities=14% Similarity=0.045 Sum_probs=123.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.+. .+.+.+. + .....++.++.+|++++ +++..++
T Consensus 20 ~ala~~La~~--G~~Vv~~~r~~~~---l~~~~~~--------l------~~~~~~~~~~~~Dv~d~------~~v~~~~ 74 (275)
T PRK05876 20 LATGTEFARR--GARVVLGDVDKPG---LRQAVNH--------L------RAEGFDVHGVMCDVRHR------EEVTHLA 74 (275)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHH--------H------HhcCCeEEEEeCCCCCH------HHHHHHH
Confidence 3688999988 9999998886321 1111111 1 11123678899999986 4665554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh----cCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ----MIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++.. .....++|++||..++...
T Consensus 75 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~---- 150 (275)
T PRK05876 75 DEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN---- 150 (275)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC----
Confidence 3 57999999997421 133456789999999999988752 1124679999997664321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHH----HhhhcCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVT----EYMEAGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~----~~~~~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+ ...|+.||.+.+.+.+ ++..+|+++++++|+.+.+.....
T Consensus 151 -----~~-----------------------------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 196 (275)
T PRK05876 151 -----AG-----------------------------LGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN 196 (275)
T ss_pred -----CC-----------------------------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc
Confidence 11 1789999997554444 443368999999999875532110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhh
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN 270 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~ 270 (318)
.. .... ...........++......++++++|+|++++.++.+
T Consensus 197 ~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~ 239 (275)
T PRK05876 197 SE----RIRG-----AACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA 239 (275)
T ss_pred hh----hhcC-----ccccccccccccccccccccCCCHHHHHHHHHHHHHc
Confidence 00 0000 0000000011223334567899999999999999865
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.9e-12 Score=110.30 Aligned_cols=204 Identities=15% Similarity=0.080 Sum_probs=134.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|+.... +.+...+ .....++.++.+|++++ +++..++
T Consensus 19 ~~l~~~l~~~--g~~v~~~~r~~~~~---~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 73 (246)
T PRK05653 19 RAIALRLAAD--GAKVVIYDSNEEAA---EALAAEL--------------RAAGGEARVLVFDVSDE------AAVRALI 73 (246)
T ss_pred HHHHHHHHHC--CCEEEEEeCChhHH---HHHHHHH--------------HhcCCceEEEEccCCCH------HHHHHHH
Confidence 3688999988 99999999964221 1111111 11234788999999987 4555544
Q ss_pred c-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||..... ......++.|+.++.++++++... .+.++||++||.......
T Consensus 74 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~----- 148 (246)
T PRK05653 74 EAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN----- 148 (246)
T ss_pred HHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC-----
Confidence 3 469999999875321 234567889999999999888521 366899999996543210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.+|.+.|.+++.+.+ .+++++++||+.++++...+
T Consensus 149 ----~~-----------------------------~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~- 194 (246)
T PRK05653 149 ----PG-----------------------------QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG- 194 (246)
T ss_pred ----CC-----------------------------CcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-
Confidence 01 17899999999988887754 47899999999887743211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....+....... .....+++++|+++++..++..... ...++.|++.++
T Consensus 195 ---------~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~~~~~~~~--~~~g~~~~~~gg 243 (246)
T PRK05653 195 ---------LPEEVKAEILKE--------IPLGRLGQPEEVANAVAFLASDAAS--YITGQVIPVNGG 243 (246)
T ss_pred ---------hhHHHHHHHHhc--------CCCCCCcCHHHHHHHHHHHcCchhc--CccCCEEEeCCC
Confidence 011111111111 1125688999999999999865332 124788998877
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2e-12 Score=112.20 Aligned_cols=205 Identities=13% Similarity=0.089 Sum_probs=131.2
Q ss_pred hhHHHHHhhCCCcEEEEE-EccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENVKIYIL-LRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+|++.|+++ |++|+++ .|+.. ...+.+..+ .....+++++.+|++++ +++..++
T Consensus 21 ~la~~l~~~--G~~v~i~~~r~~~--~~~~~~~~~---------------~~~~~~~~~~~~D~~d~------~~i~~~~ 75 (254)
T PRK12746 21 AIAMRLAND--GALVAIHYGRNKQ--AADETIREI---------------ESNGGKAFLIEADLNSI------DGVKKLV 75 (254)
T ss_pred HHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHH---------------HhcCCcEEEEEcCcCCH------HHHHHHH
Confidence 688999988 8888775 45321 111111111 11124688999999986 4665554
Q ss_pred c-------------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCc
Q psy7539 81 E-------------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 ~-------------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~ 139 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... ....+||++||..++...
T Consensus 76 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~- 154 (254)
T PRK12746 76 EQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF- 154 (254)
T ss_pred HHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC-
Confidence 4 58999999997422 1223567889999999999988753 133589999997664321
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
.+ ...|+.||.+.|.+.+.+.. .++++++++|+.+.++.
T Consensus 155 --------~~-----------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 197 (254)
T PRK12746 155 --------TG-----------------------------SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197 (254)
T ss_pred --------CC-----------------------------CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence 01 17899999999998876654 57999999999886643
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... . .....+....... .....+++++|+++++..++..... ...++.|++.++
T Consensus 198 ~~~-------~-~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~~~~~~--~~~g~~~~i~~~ 251 (254)
T PRK12746 198 NAK-------L-LDDPEIRNFATNS--------SVFGRIGQVEDIADAVAFLASSDSR--WVTGQIIDVSGG 251 (254)
T ss_pred hhh-------h-ccChhHHHHHHhc--------CCcCCCCCHHHHHHHHHHHcCcccC--CcCCCEEEeCCC
Confidence 211 0 0011111111111 1123577899999999988876432 113678999765
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.1e-11 Score=110.33 Aligned_cols=208 Identities=13% Similarity=0.052 Sum_probs=135.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|++..|+...... +.+.+.+ .....++.++.+|++++ +++..++
T Consensus 69 ~~~a~~l~~~--G~~V~i~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~v~~~~ 125 (300)
T PRK06128 69 RATAIAFARE--GADIALNYLPEEEQDA-AEVVQLI--------------QAEGRKAVALPGDLKDE------AFCRQLV 125 (300)
T ss_pred HHHHHHHHHc--CCEEEEEeCCcchHHH-HHHHHHH--------------HHcCCeEEEEecCCCCH------HHHHHHH
Confidence 3688899988 9998877765332221 2222111 11234678899999986 4555544
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|+|||+||.... ...+...+++|+.|+..+++++... ..-.+||++||..++....
T Consensus 126 ~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~----- 200 (300)
T PRK06128 126 ERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP----- 200 (300)
T ss_pred HHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC-----
Confidence 3 68999999996421 1345678999999999999998753 1225899999987654210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
. ...|+.||.+.+.+++.+.. +|+++.+++||.+.++.....
T Consensus 201 ----~-----------------------------~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~- 246 (300)
T PRK06128 201 ----T-----------------------------LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG- 246 (300)
T ss_pred ----C-----------------------------chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-
Confidence 0 16799999999999987765 589999999999877532110
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ....+..+... .....+...+|++.+++.++...... ..+..|++.++
T Consensus 247 ----~~--~~~~~~~~~~~---------~p~~r~~~p~dva~~~~~l~s~~~~~--~~G~~~~v~gg 296 (300)
T PRK06128 247 ----GQ--PPEKIPDFGSE---------TPMKRPGQPVEMAPLYVLLASQESSY--VTGEVFGVTGG 296 (300)
T ss_pred ----CC--CHHHHHHHhcC---------CCCCCCcCHHHHHHHHHHHhCccccC--ccCcEEeeCCC
Confidence 00 11222222111 11224678899999999887654321 13788999887
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.6e-12 Score=109.58 Aligned_cols=210 Identities=12% Similarity=0.073 Sum_probs=135.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.+. .+.+.+.+ .....+++++.+|+++. ++++.++
T Consensus 17 ~~la~~l~~~--g~~v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~d~~~~------~~~~~~~ 71 (250)
T TIGR03206 17 GATCRRFAEE--GAKVAVFDLNREA---AEKVAADI--------------RAKGGNAQAFACDITDR------DSVDTAV 71 (250)
T ss_pred HHHHHHHHHC--CCEEEEecCCHHH---HHHHHHHH--------------HhcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999988 8999999886421 12222111 11134688999999876 4566554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...++..+++|+.++.++++++... .+..++|++||..++....
T Consensus 72 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~---- 147 (250)
T TIGR03206 72 AAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS---- 147 (250)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC----
Confidence 3 58999999986321 1223567899999999998877521 2567899999976654311
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
....|+.+|.+.+.+...+.. .+++++++||+.+++......
T Consensus 148 ----------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~ 193 (250)
T TIGR03206 148 ----------------------------------GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDI 193 (250)
T ss_pred ----------------------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhh
Confidence 017899999999988887765 389999999998877532211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+ ....+..+...+..... ...+...+|+|+++..++...... ..++++++.++
T Consensus 194 ~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~--~~g~~~~~~~g 247 (250)
T TIGR03206 194 CG---GAENPEKLREAFTRAIP---------LGRLGQPDDLPGAILFFSSDDASF--ITGQVLSVSGG 247 (250)
T ss_pred hh---ccCChHHHHHHHHhcCC---------ccCCcCHHHHHHHHHHHcCcccCC--CcCcEEEeCCC
Confidence 11 11112222222222211 113556799999999988764321 24788988765
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.9e-12 Score=112.88 Aligned_cols=210 Identities=12% Similarity=0.068 Sum_probs=131.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.+ ..+.+.+.. . ..++.++.+|++++ +.+..++
T Consensus 25 ~~~a~~L~~~--g~~V~~~~r~~~---~~~~~~~~~--------------~--~~~~~~~~~D~~~~------~~~~~~~ 77 (264)
T PRK12829 25 RAIAEAFAEA--GARVHVCDVSEA---ALAATAARL--------------P--GAKVTATVADVADP------AQVERVF 77 (264)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------h--cCceEEEEccCCCH------HHHHHHH
Confidence 3688899988 999999999532 122222111 1 11578899999986 4555444
Q ss_pred -------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCC-ccEEEEeccccccCCccc
Q psy7539 81 -------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHL-QLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~-~~~v~~SS~~~~~~~~~~ 141 (318)
.++|+|||+||.... .......++.|+.++.++++++... .+. ++|+++||.+.....
T Consensus 78 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~--- 154 (264)
T PRK12829 78 DTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY--- 154 (264)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC---
Confidence 378999999997511 1234578999999999999887431 233 568888875542210
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
++ ...|+.+|.+.|.++..... .+++++++|||.++|+...
T Consensus 155 ------~~-----------------------------~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~ 199 (264)
T PRK12829 155 ------PG-----------------------------RTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR 199 (264)
T ss_pred ------CC-----------------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH
Confidence 00 16799999999999888764 4899999999999875422
Q ss_pred CCCCc---ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGW---TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..... ..+. +...+...... ......+++++|+|+++..++...... ..+..|++.++
T Consensus 200 ~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~~~~~--~~g~~~~i~~g 260 (264)
T PRK12829 200 RVIEARAQQLGI-GLDEMEQEYLE---------KISLGRMVEPEDIAATALFLASPAARY--ITGQAISVDGN 260 (264)
T ss_pred HHhhhhhhccCC-ChhHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCccccC--ccCcEEEeCCC
Confidence 11000 0000 00001111111 011235899999999998888643211 14789999887
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-12 Score=114.73 Aligned_cols=207 Identities=14% Similarity=0.114 Sum_probs=129.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++.+. ...+++++.+|++++ +++..++
T Consensus 17 ~~la~~l~~~--G~~V~~~~r~~~------~l~~~-----------------~~~~~~~~~~Dv~~~------~~~~~~~ 65 (273)
T PRK06182 17 KATARRLAAQ--GYTVYGAARRVD------KMEDL-----------------ASLGVHPLSLDVTDE------ASIKAAV 65 (273)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHH-----------------HhCCCeEEEeeCCCH------HHHHHHH
Confidence 3688889888 999999999632 22211 113578899999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHH----HHHHHHhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRD----MLNLSKQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~----ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+.. ++..+++. +..++|++||.++...
T Consensus 66 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~----- 139 (273)
T PRK06182 66 DTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRIINISSMGGKIY----- 139 (273)
T ss_pred HHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchhhcCC-----
Confidence 4 78999999997532 13345688999988544 45555553 5678999999764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.| ....|+.||.+.+.+...... .|++++++|||.+.++....
T Consensus 140 -----~~----------------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 186 (273)
T PRK06182 140 -----TP----------------------------LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDI 186 (273)
T ss_pred -----CC----------------------------CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchh
Confidence 01 016799999999998765542 68999999999886643210
Q ss_pred CCCccc-CC-Cch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTD-NI-NGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...... .. ..+ .......... .........+.+.+|+|++++.++..... ...|+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vA~~i~~~~~~~~~-----~~~~~~g~~ 248 (273)
T PRK06182 187 AADHLLKTSGNGAYAEQAQAVAAS-----MRSTYGSGRLSDPSVIADAISKAVTARRP-----KTRYAVGFG 248 (273)
T ss_pred hhhhhcccccccchHHHHHHHHHH-----HHHhhccccCCCHHHHHHHHHHHHhCCCC-----CceeecCcc
Confidence 000000 00 000 0000000000 00111234578999999999999987543 467887655
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.9e-12 Score=109.58 Aligned_cols=210 Identities=12% Similarity=0.091 Sum_probs=134.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |.+|+++.|+.+.. +...++ .....++.++.+|++++ +++..++
T Consensus 21 ~~la~~l~~~--G~~v~~~~r~~~~~---~~~~~~---------------~~~~~~~~~~~~D~~~~------~~~~~~~ 74 (258)
T PRK08628 21 AAISLRLAEE--GAIPVIFGRSAPDD---EFAEEL---------------RALQPRAEFVQVDLTDD------AQCRDAV 74 (258)
T ss_pred HHHHHHHHHc--CCcEEEEcCChhhH---HHHHHH---------------HhcCCceEEEEccCCCH------HHHHHHH
Confidence 3688999988 89999999865322 222211 11234788999999986 4555554
Q ss_pred c-------CccEEEEcccccC---c---chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVR---F---DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~---~---~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ ++|+|||+||... . ...+...++.|+.++.++.+++... .+..+||++||..+....
T Consensus 75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------- 147 (258)
T PRK08628 75 EQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ------- 147 (258)
T ss_pred HHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC-------
Confidence 3 6899999999632 1 1345568889999999998887642 133689999996653211
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
.+ ...|+.||...|.+++.+.. +++++..++||.++++....
T Consensus 148 --~~-----------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~--- 193 (258)
T PRK08628 148 --GG-----------------------------TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN--- 193 (258)
T ss_pred --CC-----------------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH---
Confidence 01 17899999999999988754 58999999999887743111
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
|......+.......... . .....++..+|+|.+++.++...... ..+..+.+.++
T Consensus 194 ~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~dva~~~~~l~~~~~~~--~~g~~~~~~gg 249 (258)
T PRK08628 194 WIATFDDPEAKLAAITAK----I----PLGHRMTTAEEIADTAVFLLSERSSH--TTGQWLFVDGG 249 (258)
T ss_pred HhhhccCHHHHHHHHHhc----C----CccccCCCHHHHHHHHHHHhChhhcc--ccCceEEecCC
Confidence 111111111111111111 0 11124788999999999998765321 13667777655
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.1e-12 Score=108.20 Aligned_cols=206 Identities=12% Similarity=0.046 Sum_probs=134.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... . +.+.+. + .....++.++.+|+++. +++..++
T Consensus 24 ~~ia~~l~~~--G~~V~~~~r~~~~--~-~~~~~~--------i------~~~~~~~~~~~~D~~~~------~~~~~~~ 78 (255)
T PRK07523 24 YALAEGLAQA--GAEVILNGRDPAK--L-AAAAES--------L------KGQGLSAHALAFDVTDH------DAVRAAI 78 (255)
T ss_pred HHHHHHHHHc--CCEEEEEeCCHHH--H-HHHHHH--------H------HhcCceEEEEEccCCCH------HHHHHHH
Confidence 3688999988 9999999986321 1 111111 1 11123588899999986 4666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||.... ...++..+++|+.++.++++++.+. .+..++|++||.......
T Consensus 79 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----- 153 (255)
T PRK07523 79 DAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR----- 153 (255)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC-----
Confidence 4 48999999997421 2334567889999999999988742 245689999996543210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.. ...|+.+|.+.|.+++.+.. +|+++.++||+.+.++....
T Consensus 154 ----~~-----------------------------~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~- 199 (255)
T PRK07523 154 ----PG-----------------------------IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAA- 199 (255)
T ss_pred ----CC-----------------------------CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhh-
Confidence 00 17899999999999887764 58999999999887643211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ..+....... .....+..++|+|.+++.++...... ..+..+++.++
T Consensus 200 ------~~~~-~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~i~~~gg 250 (255)
T PRK07523 200 ------LVAD-PEFSAWLEKR--------TPAGRWGKVEELVGACVFLASDASSF--VNGHVLYVDGG 250 (255)
T ss_pred ------hccC-HHHHHHHHhc--------CCCCCCcCHHHHHHHHHHHcCchhcC--ccCcEEEECCC
Confidence 1110 1111111111 11234778999999999988754321 23678888877
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.5e-12 Score=108.77 Aligned_cols=208 Identities=12% Similarity=0.071 Sum_probs=132.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+... ..+..... . ...++.++.+|++++ +++.+++
T Consensus 19 ~~la~~l~~~--G~~v~~~~r~~~~--~~~~~~~~---------------~-~~~~~~~~~~D~~~~------~~~~~~~ 72 (252)
T PRK06138 19 RATAKLFARE--GARVVVADRDAEA--AERVAAAI---------------A-AGGRAFARQGDVGSA------EAVEALV 72 (252)
T ss_pred HHHHHHHHHC--CCeEEEecCCHHH--HHHHHHHH---------------h-cCCeEEEEEcCCCCH------HHHHHHH
Confidence 3688999988 8999999986321 11111111 1 124688999999986 4665554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...+++|+.++.++.+++ ++. +.++||++||..+....
T Consensus 73 ~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~~~---- 147 (252)
T PRK06138 73 DFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTASQLALAGG---- 147 (252)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECChhhccCC----
Confidence 3 68999999997421 1234567899999987776655 442 56799999997653221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.. ...|+.+|.+.+.++..+.. .+++++++||+.+.++....
T Consensus 148 -----~~-----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 193 (252)
T PRK06138 148 -----RG-----------------------------RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR 193 (252)
T ss_pred -----CC-----------------------------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh
Confidence 00 17899999999999988764 48999999999887753221
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...+ ...+. .+.....+ ......+++++|++.+++.++...... ..+..+.+.++
T Consensus 194 ~~~~---~~~~~-~~~~~~~~--------~~~~~~~~~~~d~a~~~~~l~~~~~~~--~~g~~~~~~~g 248 (252)
T PRK06138 194 IFAR---HADPE-ALREALRA--------RHPMNRFGTAEEVAQAALFLASDESSF--ATGTTLVVDGG 248 (252)
T ss_pred hhcc---ccChH-HHHHHHHh--------cCCCCCCcCHHHHHHHHHHHcCchhcC--ccCCEEEECCC
Confidence 1110 00111 11111111 011124789999999999998775431 13566776554
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3e-12 Score=109.09 Aligned_cols=188 Identities=14% Similarity=0.143 Sum_probs=122.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ ++|+++.|+.+. .+.+. .....++++.+|++++ +++.++++
T Consensus 18 ~l~~~l~~~---~~V~~~~r~~~~---~~~~~------------------~~~~~~~~~~~D~~~~------~~~~~~~~ 67 (227)
T PRK08219 18 AIARELAPT---HTLLLGGRPAER---LDELA------------------AELPGATPFPVDLTDP------EAIAAAVE 67 (227)
T ss_pred HHHHHHHhh---CCEEEEeCCHHH---HHHHH------------------HHhccceEEecCCCCH------HHHHHHHH
Confidence 577888764 689999996321 11111 1123578999999986 57777776
Q ss_pred ---CccEEEEcccccCcc-------hhHHHHHHHhHHHH----HHHHHHHHhcCCCccEEEEeccccccCCcccccccCC
Q psy7539 82 ---TIHIVYHIAATVRFD-------DYMQTYVFLNTRGT----RDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 82 ---~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt----~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
++|+|||+||..... ..+...++.|+.+. .++++++++ +..++|++||..++....
T Consensus 68 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~v~~ss~~~~~~~~-------- 137 (227)
T PRK08219 68 QLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA--AHGHVVFINSGAGLRANP-------- 137 (227)
T ss_pred hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCeEEEEcchHhcCcCC--------
Confidence 599999999974321 22445688888884 455555554 357899999976643210
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cC-CcEEEecccccccccCCCCCCccc
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AG-MPCMILRPSIIIPIWKDPLPGWTD 224 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~-~~~~ilR~~~v~G~~~~~~~g~~~ 224 (318)
+ ...|+.+|...|.++..... .+ +++..++||.+.++..
T Consensus 138 -~-----------------------------~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~-------- 179 (227)
T PRK08219 138 -G-----------------------------WGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQ-------- 179 (227)
T ss_pred -C-----------------------------CchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHh--------
Confidence 0 17899999999988887654 34 7888888885533110
Q ss_pred CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC
Q psy7539 225 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 286 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~ 286 (318)
. .+ .... +.......+++++|++++++.+++++.. +.+|++.-
T Consensus 180 ---~--~~----~~~~-----~~~~~~~~~~~~~dva~~~~~~l~~~~~-----~~~~~~~~ 222 (227)
T PRK08219 180 ---R--GL----VAQE-----GGEYDPERYLRPETVAKAVRFAVDAPPD-----AHITEVVV 222 (227)
T ss_pred ---h--hh----hhhh-----ccccCCCCCCCHHHHHHHHHHHHcCCCC-----CccceEEE
Confidence 0 00 0000 0111235689999999999999987653 67777753
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.9e-12 Score=109.19 Aligned_cols=201 Identities=13% Similarity=0.056 Sum_probs=129.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... ....+++++.+|++++ +++..++
T Consensus 18 ~~~a~~l~~~--g~~V~~~~r~~~~~-------------------------~~~~~~~~~~~D~~d~------~~~~~~~ 64 (270)
T PRK06179 18 RATAEKLARA--GYRVFGTSRNPARA-------------------------APIPGVELLELDVTDD------ASVQAAV 64 (270)
T ss_pred HHHHHHHHHC--CCEEEEEeCChhhc-------------------------cccCCCeeEEeecCCH------HHHHHHH
Confidence 3688999988 99999999964322 1124688999999987 5676666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... .......+++|+.|+.++++++ ++ .+..+||++||.++....
T Consensus 65 ~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~---- 139 (270)
T PRK06179 65 DEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRA-QGSGRIINISSVLGFLPA---- 139 (270)
T ss_pred HHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCceEEEECCccccCCC----
Confidence 5 47999999997532 1335678999999999988875 44 367899999997654321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
|. ...|+.||...|.++..... .|+++++++||.+.+.....
T Consensus 140 ------~~----------------------------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~ 185 (270)
T PRK06179 140 ------PY----------------------------MALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDAN 185 (270)
T ss_pred ------CC----------------------------ccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccc
Confidence 10 16899999999998877643 58999999999887653221
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEee
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 285 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~ 285 (318)
.......+.. ............ ..........+++|+.++.++..+.. ...|..+
T Consensus 186 ~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~va~~~~~~~~~~~~-----~~~~~~~ 240 (270)
T PRK06179 186 APEPDSPLAE-YDRERAVVSKAV------AKAVKKADAPEVVADTVVKAALGPWP-----KMRYTAG 240 (270)
T ss_pred cCCCCCcchh-hHHHHHHHHHHH------HhccccCCCHHHHHHHHHHHHcCCCC-----CeeEecC
Confidence 1110000000 000000000000 00112346779999999999987653 3456543
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.7e-12 Score=106.92 Aligned_cols=193 Identities=11% Similarity=0.074 Sum_probs=130.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+... ..+.+.+. .....+++.+|+++. +++..+++
T Consensus 22 ~la~~l~~~--G~~v~~~~r~~~~--~~~~~~~~-----------------~~~~~~~~~~D~~~~------~~~~~~~~ 74 (239)
T PRK12828 22 ATAAWLAAR--GARVALIGRGAAP--LSQTLPGV-----------------PADALRIGGIDLVDP------QAARRAVD 74 (239)
T ss_pred HHHHHHHHC--CCeEEEEeCChHh--HHHHHHHH-----------------hhcCceEEEeecCCH------HHHHHHHH
Confidence 688899888 9999999996422 11111111 112466788999876 45555443
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
++|+|||+||.... ...+.+.++.|+.++.++++++.+. .+.++||++||..++...
T Consensus 75 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------ 148 (239)
T PRK12828 75 EVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG------ 148 (239)
T ss_pred HHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC------
Confidence 68999999986421 1234567889999999998887531 357899999997765421
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+. ..|+.+|.+.+.++..+.+ .++++.++|||.++++....
T Consensus 149 ---~~~-----------------------------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~-- 194 (239)
T PRK12828 149 ---PGM-----------------------------GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA-- 194 (239)
T ss_pred ---CCc-----------------------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh--
Confidence 111 6799999999888876654 48999999999887632100
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. . .......|++++|+|+++..++...... ..+..+++.++
T Consensus 195 ----~------------------~--~~~~~~~~~~~~dva~~~~~~l~~~~~~--~~g~~~~~~g~ 235 (239)
T PRK12828 195 ----D------------------M--PDADFSRWVTPEQIAAVIAFLLSDEAQA--ITGASIPVDGG 235 (239)
T ss_pred ----c------------------C--CchhhhcCCCHHHHHHHHHHHhCccccc--ccceEEEecCC
Confidence 0 0 0011223799999999999988764321 13678888776
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-11 Score=107.14 Aligned_cols=206 Identities=12% Similarity=0.051 Sum_probs=131.4
Q ss_pred ChhHHHHHhhCCCcEEEE-EEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYI-LLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~-l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
+++++.|+++ |++|++ ..|+.. .. +.+.+.+ .....++.++.+|++++ +++..+
T Consensus 18 ~~~a~~l~~~--g~~v~~~~~r~~~--~~-~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~ 72 (250)
T PRK08063 18 KAIALRLAEE--GYDIAVNYARSRK--AA-EETAEEI--------------EALGRKALAVKANVGDV------EKIKEM 72 (250)
T ss_pred HHHHHHHHHC--CCEEEEEcCCCHH--HH-HHHHHHH--------------HhcCCeEEEEEcCCCCH------HHHHHH
Confidence 3688999988 888766 456422 11 1111111 11234688999999987 566655
Q ss_pred hc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 80 SE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
++ .+|+|||+||.... .......+++|+.++.++++++... .+.++||++||.......
T Consensus 73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---- 148 (250)
T PRK08063 73 FAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL---- 148 (250)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC----
Confidence 54 58999999986421 1223446789999999999888652 244699999996543210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+ ...|+.+|.+.|.+++.+.. .++++++++|+.+.......
T Consensus 149 -----~~-----------------------------~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~ 194 (250)
T PRK08063 149 -----EN-----------------------------YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH 194 (250)
T ss_pred -----CC-----------------------------ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh
Confidence 01 17899999999999987754 57999999999886533211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .....+...... .. ....+++.+|+|++++.++...... ..+..|++.++
T Consensus 195 ~-------~~~~~~~~~~~~-~~--------~~~~~~~~~dva~~~~~~~~~~~~~--~~g~~~~~~gg 245 (250)
T PRK08063 195 F-------PNREELLEDARA-KT--------PAGRMVEPEDVANAVLFLCSPEADM--IRGQTIIVDGG 245 (250)
T ss_pred c-------cCchHHHHHHhc-CC--------CCCCCcCHHHHHHHHHHHcCchhcC--ccCCEEEECCC
Confidence 1 111111111111 10 1124799999999999998764321 13778888876
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.1e-11 Score=105.26 Aligned_cols=205 Identities=13% Similarity=0.056 Sum_probs=133.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|..... .+.+.+... .+ .....+++++.+|++++ +.+..++
T Consensus 20 ~~la~~l~~~--g~~v~~~~~~~~~~--~~~~~~~~~-----~~------~~~~~~~~~~~~Dl~~~------~~~~~~~ 78 (249)
T PRK12827 20 RAIAVRLAAD--GADVIVLDIHPMRG--RAEADAVAA-----GI------EAAGGKALGLAFDVRDF------AATRAAL 78 (249)
T ss_pred HHHHHHHHHC--CCeEEEEcCccccc--HHHHHHHHH-----HH------HhcCCcEEEEEccCCCH------HHHHHHH
Confidence 3688899988 89999988753221 122222110 00 12234788999999986 4555554
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH-----hcCCCccEEEEeccccccCCccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK-----QMIHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-----~~~~~~~~v~~SS~~~~~~~~~~ 141 (318)
.++|+|||+||.... ...+...+++|+.++.++++++. + .+.++||++||..++...
T Consensus 79 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~iv~~sS~~~~~~~--- 154 (249)
T PRK12827 79 DAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRA-RRGGRIVNIASVAGVRGN--- 154 (249)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCCeEEEEECCchhcCCC---
Confidence 368999999997531 12345688999999999999988 3 256789999997654321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.+ ...|+.+|.+.+.+++.+.. .+++++++|||.+.+....
T Consensus 155 ------~~-----------------------------~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~ 199 (249)
T PRK12827 155 ------RG-----------------------------QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMAD 199 (249)
T ss_pred ------CC-----------------------------CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccc
Confidence 01 17899999999988877654 4899999999999774321
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .. +. ....... ....+.+.+|++++++.++...... ..++.+++.++
T Consensus 200 ~-------~~-~~---~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~~--~~g~~~~~~~g 247 (249)
T PRK12827 200 N-------AA-PT---EHLLNPV---------PVQRLGEPDEVAALVAFLVSDAASY--VTGQVIPVDGG 247 (249)
T ss_pred c-------cc-hH---HHHHhhC---------CCcCCcCHHHHHHHHHHHcCcccCC--ccCcEEEeCCC
Confidence 1 11 00 1111110 1113458899999999888653321 13678888765
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.1e-12 Score=108.49 Aligned_cols=209 Identities=10% Similarity=0.009 Sum_probs=128.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+...++ .....++.++.+|++++ +++..++
T Consensus 22 ~~la~~l~~~--G~~v~~~~r~~~---~~~~~~~~---------------~~~~~~~~~~~~D~~~~------~~~~~~~ 75 (260)
T PRK12823 22 RGVALRAAAE--GARVVLVDRSEL---VHEVAAEL---------------RAAGGEALALTADLETY------AGAQAAM 75 (260)
T ss_pred HHHHHHHHHC--CCEEEEEeCchH---HHHHHHHH---------------HhcCCeEEEEEEeCCCH------HHHHHHH
Confidence 3688999988 999999988531 11111111 11124678899999986 3444443
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|++||+||.... ...+...+++|+.++..+++.+ .+ .+..+||++||..+++.
T Consensus 76 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~---- 150 (260)
T PRK12823 76 AAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLA-QGGGAIVNVSSIATRGI---- 150 (260)
T ss_pred HHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCeEEEEcCccccCC----
Confidence 3 68999999985311 1234557788988877655544 34 25568999999765421
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
+ ...|+.||.+.+.+++.+.. +|+++.+++||.++++...
T Consensus 151 -------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 194 (260)
T PRK12823 151 -------N-----------------------------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRR 194 (260)
T ss_pred -------C-----------------------------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchh
Confidence 0 06899999999999988765 4899999999999875310
Q ss_pred CCCC---cccCCCc-hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPG---WTDNING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
-... +...... ...+......+. ...-+.+++|+|+++..++...... ..+..|++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~--~~g~~~~v~gg 257 (260)
T PRK12823 195 VPRNAAPQSEQEKAWYQQIVDQTLDSS---------LMKRYGTIDEQVAAILFLASDEASY--ITGTVLPVGGG 257 (260)
T ss_pred hHHhhccccccccccHHHHHHHHhccC---------CcccCCCHHHHHHHHHHHcCccccc--ccCcEEeecCC
Confidence 0000 0000000 011222222211 1113457899999999888654321 13778998776
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.5e-12 Score=108.56 Aligned_cols=190 Identities=14% Similarity=0.126 Sum_probs=125.3
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+... .+.+.+.+ .....++.++.+|++++ +.+..+++
T Consensus 16 ~la~~l~~~--g~~Vi~~~r~~~~---~~~~~~~l--------------~~~~~~~~~~~~Dl~~~------~~~~~~~~ 70 (263)
T PRK06181 16 ALAVRLARA--GAQLVLAARNETR---LASLAQEL--------------ADHGGEALVVPTDVSDA------EACERLIE 70 (263)
T ss_pred HHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHHH
Confidence 678888887 8999999985321 11121111 11234788899999986 45555544
Q ss_pred -------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
++|+|||+||.... ...+...+++|+.++.++++.+... .+..++|++||..++...
T Consensus 71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~------ 144 (263)
T PRK06181 71 AAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV------ 144 (263)
T ss_pred HHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC------
Confidence 68999999997432 1224567899999999999988531 234689999997664321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+ ...|+.+|.+.|.+...+.. .++++++++||.+.......
T Consensus 145 ---~~-----------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~-- 190 (263)
T PRK06181 145 ---PT-----------------------------RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR-- 190 (263)
T ss_pred ---CC-----------------------------ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh--
Confidence 01 17899999999998877653 58999999999775532110
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
.... .+. .....+.+...+++++|+|++++.++...
T Consensus 191 -----~~~~--------~~~--~~~~~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 191 -----ALDG--------DGK--PLGKSPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred -----hccc--------ccc--ccccccccccCCCCHHHHHHHHHHHhhCC
Confidence 0000 011 11112223347899999999999999753
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.2e-12 Score=108.02 Aligned_cols=200 Identities=12% Similarity=0.076 Sum_probs=131.8
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+.. ++.+.. . ..+..++.+|+++. +.+..+++
T Consensus 24 ~~a~~l~~~--g~~V~~~~r~~~------~~~~~~--------------~--~~~~~~~~~D~~~~------~~v~~~~~ 73 (245)
T PRK07060 24 ACAVALAQR--GARVVAAARNAA------ALDRLA--------------G--ETGCEPLRLDVGDD------AAIRAALA 73 (245)
T ss_pred HHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------H--HhCCeEEEecCCCH------HHHHHHHH
Confidence 678888887 899999998532 111110 0 11356788999876 45566554
Q ss_pred ---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccccccCC
Q psy7539 82 ---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 82 ---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
++|+|||+||.... ...+...++.|+.++.++++++.+. .+ ..+||++||...+....
T Consensus 74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------- 145 (245)
T PRK07060 74 AAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP-------- 145 (245)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC--------
Confidence 58999999997532 1335567889999999999988652 11 36899999976543210
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcc
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWT 223 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~ 223 (318)
+ ...|+.+|.+.|.+++.+.. .+++++.+||+.+.++..... |
T Consensus 146 -~-----------------------------~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~--~- 192 (245)
T PRK07060 146 -D-----------------------------HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEA--W- 192 (245)
T ss_pred -C-----------------------------CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhh--c-
Confidence 0 17899999999999988765 479999999999877532110 1
Q ss_pred cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 224 DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..+ .....+... .....+++++|+|++++.++..+... ..+..+++.++
T Consensus 193 ---~~~-~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~~~--~~G~~~~~~~g 241 (245)
T PRK07060 193 ---SDP-QKSGPMLAA---------IPLGRFAEVDDVAAPILFLLSDAASM--VSGVSLPVDGG 241 (245)
T ss_pred ---cCH-HHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccCC--ccCcEEeECCC
Confidence 111 111111110 11245899999999999999764421 24778888765
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.1e-12 Score=109.99 Aligned_cols=211 Identities=13% Similarity=0.042 Sum_probs=132.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchh-ccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAI-FEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++++++|+++ |++|+++.|+... .+.+.+.+. ... ..+++++.+|++++ +++..+
T Consensus 16 ~~la~~l~~~--g~~vi~~~r~~~~---~~~~~~~~~-------------~~~~~~~~~~~~~D~~~~------~~i~~~ 71 (259)
T PRK12384 16 AFLCHGLAEE--GYRVAVADINSEK---AANVAQEIN-------------AEYGEGMAYGFGADATSE------QSVLAL 71 (259)
T ss_pred HHHHHHHHHC--CCEEEEEECCHHH---HHHHHHHHH-------------HhcCCceeEEEEccCCCH------HHHHHH
Confidence 3688899988 8999999886321 111111100 111 13688999999976 455544
Q ss_pred hc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCccc
Q psy7539 80 SE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~ 141 (318)
++ .+|+|||+||.... ...+...+++|+.|+..+++++.+. .+ -.++|++||..+....
T Consensus 72 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~--- 148 (259)
T PRK12384 72 SRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS--- 148 (259)
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC---
Confidence 33 67999999986421 1334567899999988877766542 23 3589999996432110
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.. ...|+.||.+.+.+++.+.. +|+++.++|||.+++....
T Consensus 149 ------~~-----------------------------~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~ 193 (259)
T PRK12384 149 ------KH-----------------------------NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMF 193 (259)
T ss_pred ------CC-----------------------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhh
Confidence 00 17899999999888877653 6899999999988764211
Q ss_pred CCCCcccCCCchHHHHHHHhc--Cc----eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGK--GI----IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .++..... +. ......++.....+++.+|+++++..++.+... ...+.+|++.++
T Consensus 194 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~--~~~G~~~~v~~g 255 (259)
T PRK12384 194 Q------------SLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKAS--YCTGQSINVTGG 255 (259)
T ss_pred h------------hhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccc--cccCceEEEcCC
Confidence 0 11111110 00 000111223345788999999999988765432 124788999987
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-11 Score=108.88 Aligned_cols=213 Identities=14% Similarity=0.073 Sum_probs=132.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|... ..+.+.+.+ . ...+++++.+|++++ +++..++
T Consensus 32 ~~la~~l~~~--G~~v~~~~~~~~---~~~~~~~~~--------------~-~~~~~~~~~~Dl~d~------~~~~~~~ 85 (280)
T PLN02253 32 ESIVRLFHKH--GAKVCIVDLQDD---LGQNVCDSL--------------G-GEPNVCFFHCDVTVE------DDVSRAV 85 (280)
T ss_pred HHHHHHHHHc--CCEEEEEeCCHH---HHHHHHHHh--------------c-CCCceEEEEeecCCH------HHHHHHH
Confidence 3688899988 999999988522 111121110 1 124688999999986 4666555
Q ss_pred c-------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... ....++|++||..+....
T Consensus 86 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--- 162 (280)
T PLN02253 86 DFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG--- 162 (280)
T ss_pred HHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC---
Confidence 4 68999999997421 1335678999999999999877642 123478999886542110
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
| ....|+.||.+.|.+.+.+.. +++++.+++||.+......
T Consensus 163 -------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~ 207 (280)
T PLN02253 163 -------L----------------------------GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALAL 207 (280)
T ss_pred -------C----------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccc
Confidence 0 016899999999999988765 4799999999988664211
Q ss_pred C-CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 P-LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .+. . ......+...... ...........++.+|+|.+++.++..... ...+..+++.++
T Consensus 208 ~~~~~---~-~~~~~~~~~~~~~----~~~~~~l~~~~~~~~dva~~~~~l~s~~~~--~i~G~~i~vdgG 268 (280)
T PLN02253 208 AHLPE---D-ERTEDALAGFRAF----AGKNANLKGVELTVDDVANAVLFLASDEAR--YISGLNLMIDGG 268 (280)
T ss_pred ccccc---c-cchhhhhhhhHHH----hhcCCCCcCCCCCHHHHHHHHHhhcCcccc--cccCcEEEECCc
Confidence 1 000 0 0001111111000 000001112347899999999998865332 123678888776
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.9e-11 Score=103.72 Aligned_cols=205 Identities=17% Similarity=0.156 Sum_probs=131.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+... .. +.+...+ .....++.++.+|++++ +++..++
T Consensus 12 ~~la~~l~~~--G~~v~~~~r~~~~-~~-~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 67 (239)
T TIGR01830 12 RAIALKLAKE--GAKVIITYRSSEE-GA-EEVVEEL--------------KAYGVKALGVVCDVSDR------EDVKAVV 67 (239)
T ss_pred HHHHHHHHHC--CCEEEEEeCCchh-HH-HHHHHHH--------------HhcCCceEEEEecCCCH------HHHHHHH
Confidence 3678899888 8999999986421 11 1111111 11123688999999986 4555554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||.... .......+++|+.++.++++++... .+..+|+++||.+......
T Consensus 68 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~---- 143 (239)
T TIGR01830 68 EEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA---- 143 (239)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC----
Confidence 3 47999999997532 1334568899999999999988752 2456899999965432210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
+ ...|+.+|.+.+.++..+.+ .|+.++++||+.+.+....
T Consensus 144 -----~-----------------------------~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~-- 187 (239)
T TIGR01830 144 -----G-----------------------------QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD-- 187 (239)
T ss_pred -----C-----------------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh--
Confidence 0 17899999999988777644 5899999999976442111
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . .......... . ...-+.+++|++.+++.++...... ..+..||+.++
T Consensus 188 -----~~-~-~~~~~~~~~~-~--------~~~~~~~~~~~a~~~~~~~~~~~~~--~~g~~~~~~~g 237 (239)
T TIGR01830 188 -----KL-S-EKVKKKILSQ-I--------PLGRFGTPEEVANAVAFLASDEASY--ITGQVIHVDGG 237 (239)
T ss_pred -----hc-C-hHHHHHHHhc-C--------CcCCCcCHHHHHHHHHHHhCcccCC--cCCCEEEeCCC
Confidence 11 1 1111112211 1 0123668999999999888543221 24779999765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.2e-11 Score=104.71 Aligned_cols=183 Identities=16% Similarity=0.145 Sum_probs=123.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+... ..+...+. .....++.++.+|++++ +++..++
T Consensus 21 ~~l~~~L~~~--G~~Vi~~~r~~~~--~~~~~~~~---------------~~~~~~~~~~~~D~~~~------~~~~~~~ 75 (239)
T PRK07666 21 RAVAIALAKE--GVNVGLLARTEEN--LKAVAEEV---------------EAYGVKVVIATADVSDY------EEVTAAI 75 (239)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHH---------------HHhCCeEEEEECCCCCH------HHHHHHH
Confidence 3688899988 8999999996321 11111111 11134788999999886 4665555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ....+..+++|+.++.++++++... .+.+++|++||..++...
T Consensus 76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~----- 150 (239)
T PRK07666 76 EQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA----- 150 (239)
T ss_pred HHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC-----
Confidence 4 68999999987421 1334568899999999998887631 255789999996654321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.+|.+.+.++..+.. .|++++++|||.+.......
T Consensus 151 ----~~-----------------------------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~- 196 (239)
T PRK07666 151 ----AV-----------------------------TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVD- 196 (239)
T ss_pred ----CC-----------------------------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhh-
Confidence 01 17899999999988877653 58999999999775532110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
. .. .......++..+|+|+.++.++..+
T Consensus 197 ------~------------~~------~~~~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 197 ------L------------GL------TDGNPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred ------c------------cc------cccCCCCCCCHHHHHHHHHHHHhCC
Confidence 0 00 0011235688999999999999775
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.2e-11 Score=103.97 Aligned_cols=211 Identities=16% Similarity=0.036 Sum_probs=127.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+... ..+...++.+ ......+.++.+|++++ +++..++
T Consensus 18 ~~~a~~l~~~--g~~v~~~~r~~~~--~~~~~~~l~~-------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 74 (256)
T PRK09186 18 SALVKAILEA--GGIVIAADIDKEA--LNELLESLGK-------------EFKSKKLSLVELDITDQ------ESLEEFL 74 (256)
T ss_pred HHHHHHHHHC--CCEEEEEecChHH--HHHHHHHHHh-------------hcCCCceeEEEecCCCH------HHHHHHH
Confidence 3688999988 9999999885321 1111111100 00123567789999987 5666655
Q ss_pred c-------CccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCc-
Q psy7539 81 E-------TIHIVYHIAATVRF----------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEK- 139 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~- 139 (318)
+ .+|+|||+|+.... ...+...+++|+.++..+++++... .+..+||++||.++.....
T Consensus 75 ~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 154 (256)
T PRK09186 75 SKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF 154 (256)
T ss_pred HHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc
Confidence 4 38999999975311 1234567888888777666554421 2567999999976543211
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
...+..... .+..|+.||...+.+.+.... .++.+++++||.+.+..
T Consensus 155 ~~~~~~~~~-----------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~ 205 (256)
T PRK09186 155 EIYEGTSMT-----------------------------SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ 205 (256)
T ss_pred hhccccccC-----------------------------CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence 111111000 115799999999988876554 57999999999765421
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+..+....... .....+++++|+|++++.++...... ..+..+.+.++
T Consensus 206 -------------~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~--~~g~~~~~~~g 253 (256)
T PRK09186 206 -------------PEAFLNAYKKC---------CNGKGMLDPDDICGTLVFLLSDQSKY--ITGQNIIVDDG 253 (256)
T ss_pred -------------CHHHHHHHHhc---------CCccCCCCHHHhhhhHhheecccccc--ccCceEEecCC
Confidence 11111111111 01235789999999999999754321 13566666655
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.3e-11 Score=104.88 Aligned_cols=201 Identities=10% Similarity=0.071 Sum_probs=129.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|... ...+.+.+.+ .....+++++.+|+++. +++..++
T Consensus 23 ~~la~~l~~~--g~~v~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 78 (258)
T PRK09134 23 RAIALDLAAH--GFDVAVHYNRSR--DEAEALAAEI--------------RALGRRAVALQADLADE------AEVRALV 78 (258)
T ss_pred HHHHHHHHHC--CCEEEEEeCCCH--HHHHHHHHHH--------------HhcCCeEEEEEcCCCCH------HHHHHHH
Confidence 3688999888 898888877432 1111121111 11134688999999986 4555554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||.... ....+..+++|+.|+..+++++... ..-.++|++||......
T Consensus 79 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~------ 152 (258)
T PRK09134 79 ARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL------ 152 (258)
T ss_pred HHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC------
Confidence 3 47999999996422 2345678999999999999987753 12347788877543221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.|. ...|+.||.+.|.+.+.+.+ .++.+++++||.+.....
T Consensus 153 ----~p~----------------------------~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~---- 196 (258)
T PRK09134 153 ----NPD----------------------------FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGR---- 196 (258)
T ss_pred ----CCC----------------------------chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcc----
Confidence 110 05799999999999988765 248999999997754211
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .+..+ .....+. + .....+++|+|++++.++.++.. .++.|++.++
T Consensus 197 ----~--~~~~~-~~~~~~~----~-----~~~~~~~~d~a~~~~~~~~~~~~----~g~~~~i~gg 243 (258)
T PRK09134 197 ----Q--SPEDF-ARQHAAT----P-----LGRGSTPEEIAAAVRYLLDAPSV----TGQMIAVDGG 243 (258)
T ss_pred ----c--ChHHH-HHHHhcC----C-----CCCCcCHHHHHHHHHHHhcCCCc----CCCEEEECCC
Confidence 0 01111 1222111 0 11247799999999999986543 4788888887
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-11 Score=105.77 Aligned_cols=207 Identities=11% Similarity=0.037 Sum_probs=132.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|+.... +.+...+ .. ..++.++.+|++++ +++..++
T Consensus 19 ~~l~~~l~~~--G~~V~~~~r~~~~~---~~~~~~~--------------~~-~~~~~~~~~D~~~~------~~~~~~~ 72 (251)
T PRK07231 19 EGIARRFAAE--GARVVVTDRNEEAA---ERVAAEI--------------LA-GGRAIAVAADVSDE------ADVEAAV 72 (251)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHHH---HHHHHHH--------------hc-CCeEEEEECCCCCH------HHHHHHH
Confidence 3688999988 99999999964221 1111110 11 24688999999987 5666655
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... ...+...+++|+.++.++++.+... .+.++||++||..++....
T Consensus 73 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--- 149 (251)
T PRK07231 73 AAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP--- 149 (251)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC---
Confidence 4 57999999997321 1234568899999987777766531 2567899999977654211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+ ...|+.+|...+.++..+.. .+++++.++||.+.+.....
T Consensus 150 ------~-----------------------------~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~ 194 (251)
T PRK07231 150 ------G-----------------------------LGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEA 194 (251)
T ss_pred ------C-----------------------------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchh
Confidence 1 17899999999988887765 38899999999885432111
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... . ..+ ........ ......+++++|+|.+++.++...... ..+..+.+.++
T Consensus 195 ~~~---~-~~~-~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~~~--~~g~~~~~~gg 247 (251)
T PRK07231 195 FMG---E-PTP-ENRAKFLA---------TIPLGRLGTPEDIANAALFLASDEASW--ITGVTLVVDGG 247 (251)
T ss_pred hhc---c-cCh-HHHHHHhc---------CCCCCCCcCHHHHHHHHHHHhCccccC--CCCCeEEECCC
Confidence 000 0 000 11111111 112335789999999999999654321 13566777655
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.2e-11 Score=103.92 Aligned_cols=205 Identities=13% Similarity=0.130 Sum_probs=130.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+... ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 19 ~~l~~~l~~~--G~~v~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 74 (248)
T PRK05557 19 RAIAERLAAQ--GANVVINYASSEA--GAEALVAEI--------------GALGGKALAVQGDVSDA------ESVERAV 74 (248)
T ss_pred HHHHHHHHHC--CCEEEEEeCCchh--HHHHHHHHH--------------HhcCCceEEEEcCCCCH------HHHHHHH
Confidence 3688999988 9999888885431 111111111 11234788899999986 4555544
Q ss_pred c-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||..... ..+...+++|+.++.++++++... .+.++||++||........
T Consensus 75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~---- 150 (248)
T PRK05557 75 DEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP---- 150 (248)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC----
Confidence 3 689999999974321 234567889999999999888753 2456899999964432110
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
. ...|+.+|.+.+.+++.+.+ .+++++++|||.+.+....
T Consensus 151 -----~-----------------------------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~-- 194 (248)
T PRK05557 151 -----G-----------------------------QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD-- 194 (248)
T ss_pred -----C-----------------------------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc--
Confidence 0 17899999999988876654 4789999999976432111
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ...+....... .....+.+++|++.++..++..... ...++.|++.++
T Consensus 195 -----~~--~~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~~~~--~~~g~~~~i~~~ 244 (248)
T PRK05557 195 -----AL--PEDVKEAILAQ---------IPLGRLGQPEEIASAVAFLASDEAA--YITGQTLHVNGG 244 (248)
T ss_pred -----cc--ChHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCcccC--CccccEEEecCC
Confidence 11 11122111111 1122467999999999888765221 114788999866
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.9e-11 Score=104.43 Aligned_cols=206 Identities=15% Similarity=0.091 Sum_probs=127.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |+.|+...|+.. +++.+.. ..+ .....++.++.+|+++. +++..+++
T Consensus 17 ~~a~~l~~~--G~~vv~~~~~~~-----~~~~~~~-----~~l------~~~~~~~~~~~~Dl~~~------~~~~~~~~ 72 (248)
T PRK06123 17 ATALLAAER--GYAVCLNYLRNR-----DAAEAVV-----QAI------RRQGGEALAVAADVADE------ADVLRLFE 72 (248)
T ss_pred HHHHHHHHC--CCeEEEecCCCH-----HHHHHHH-----HHH------HhCCCcEEEEEeccCCH------HHHHHHHH
Confidence 678899988 887776654321 1111110 001 11124678899999986 45665554
Q ss_pred -------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcCC------CccEEEEeccccccCCcc
Q psy7539 82 -------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQMIH------LQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~~------~~~~v~~SS~~~~~~~~~ 140 (318)
.+|+|||+||.... ...+...+++|+.++.++++++.+.-. -.++|++||..+....
T Consensus 73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-- 150 (248)
T PRK06123 73 AVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS-- 150 (248)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC--
Confidence 68999999997421 123456899999999999888764211 1369999997553210
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
|. ....|+.+|.+.|.++..+.. ++++++++||+.++++..
T Consensus 151 --------~~---------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~ 195 (248)
T PRK06123 151 --------PG---------------------------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIH 195 (248)
T ss_pred --------CC---------------------------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchh
Confidence 00 004699999999999887754 489999999999988532
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ......+....... + ..-+.+++|++++++.++..... ...+..|++.++
T Consensus 196 ~~--------~~~~~~~~~~~~~~----p-----~~~~~~~~d~a~~~~~l~~~~~~--~~~g~~~~~~gg 247 (248)
T PRK06123 196 AS--------GGEPGRVDRVKAGI----P-----MGRGGTAEEVARAILWLLSDEAS--YTTGTFIDVSGG 247 (248)
T ss_pred hc--------cCCHHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCcccc--CccCCEEeecCC
Confidence 11 01111222221111 0 01124789999999998875432 113788998765
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.9e-11 Score=102.59 Aligned_cols=205 Identities=13% Similarity=0.039 Sum_probs=132.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|+... . +.+.+.+ .....++.++.+|++++ +++..++
T Consensus 21 ~~la~~l~~~--G~~v~~~~r~~~~--~-~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 75 (250)
T PRK12939 21 AAFAEALAEA--GATVAFNDGLAAE--A-RELAAAL--------------EAAGGRAHAIAADLADP------ASVQRFF 75 (250)
T ss_pred HHHHHHHHHc--CCEEEEEeCCHHH--H-HHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHH
Confidence 3688899988 9999999875321 1 1111111 11124788999999986 4665554
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
.++|+|||+||.... ...+...++.|+.++.++++++... .+..+||++||........
T Consensus 76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---- 151 (250)
T PRK12939 76 DAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP---- 151 (250)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC----
Confidence 368999999997432 1234567889999999999887642 1234899999965532210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
. ...|+.+|.+.|.+++.+.. .++.++.++||.+..+...
T Consensus 152 -----~-----------------------------~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~-- 195 (250)
T PRK12939 152 -----K-----------------------------LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATA-- 195 (250)
T ss_pred -----C-----------------------------cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcccc--
Confidence 0 16799999999999987654 5789999999977543211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ....+...+.. ......+++++|+|++++.++..... ...++.+++.++
T Consensus 196 -----~~-~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~i~~~gg 246 (250)
T PRK12939 196 -----YV-PADERHAYYLK---------GRALERLQVPDDVAGAVLFLLSDAAR--FVTGQLLPVNGG 246 (250)
T ss_pred -----cc-CChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCcccc--CccCcEEEECCC
Confidence 00 00112111111 12234578999999999999976432 124778888776
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.8e-11 Score=108.19 Aligned_cols=148 Identities=11% Similarity=0.062 Sum_probs=99.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|... ..+++.+.+ .....++.++.+|+++. +++..++
T Consensus 20 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~D~~d~------~~~~~~~ 74 (287)
T PRK06194 20 LAFARIGAAL--GMKLVLADVQQD---ALDRAVAEL--------------RAQGAEVLGVRTDVSDA------AQVEALA 74 (287)
T ss_pred HHHHHHHHHC--CCEEEEEeCChH---HHHHHHHHH--------------HhcCCeEEEEECCCCCH------HHHHHHH
Confidence 4789999988 999999988532 112221111 11123688899999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCC-----CccEEEEeccccccC
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIH-----LQLFVYVSTAYCHPK 137 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-----~~~~v~~SS~~~~~~ 137 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++.+++ .+... ..++|++||.+++..
T Consensus 75 ~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 154 (287)
T PRK06194 75 DAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA 154 (287)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC
Confidence 4 47999999998532 1334567899999999977774 33211 148999999776542
Q ss_pred CcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-c-----CCcEEEeccccc
Q psy7539 138 EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-A-----GMPCMILRPSII 211 (318)
Q Consensus 138 ~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~-----~~~~~ilR~~~v 211 (318)
. .+. ..|+.+|.+.|.++..+.. . ++++..+.|+.+
T Consensus 155 ~---------~~~-----------------------------~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i 196 (287)
T PRK06194 155 P---------PAM-----------------------------GIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFV 196 (287)
T ss_pred C---------CCC-----------------------------cchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcc
Confidence 1 111 7899999999999987655 2 356667777655
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=9.6e-11 Score=102.71 Aligned_cols=190 Identities=10% Similarity=0.023 Sum_probs=120.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+... ..+.+..+ .....++.++.+|++++ +++..++
T Consensus 14 ~~la~~l~~~--g~~V~~~~r~~~~--~~~~~~~l---------------~~~~~~~~~~~~D~~~~------~~~~~~~ 68 (270)
T PRK05650 14 RAIALRWARE--GWRLALADVNEEG--GEETLKLL---------------REAGGDGFYQRCDVRDY------SQLTALA 68 (270)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHH---------------HhcCCceEEEEccCCCH------HHHHHHH
Confidence 3688999988 9999999885321 12111111 11234688899999876 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHH----HHhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNL----SKQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~----a~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.++.++.+. +.+. +..++|++||..+.....
T Consensus 69 ~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~--- 144 (270)
T PRK05650 69 QACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNIASMAGLMQGP--- 144 (270)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEECChhhcCCCC---
Confidence 3 68999999997432 133455788998887776655 4543 567999999976543210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
....|+.+|.+.+.+...+.. .|+.+++++|+.+..+....
T Consensus 145 -----------------------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 189 (270)
T PRK05650 145 -----------------------------------AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDS 189 (270)
T ss_pred -----------------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccc
Confidence 017899999998877766654 47899999999886542211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhh
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN 270 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~ 270 (318)
.............. .....+++++|+|+.++.++.+
T Consensus 190 -------~~~~~~~~~~~~~~---------~~~~~~~~~~~vA~~i~~~l~~ 225 (270)
T PRK05650 190 -------FRGPNPAMKAQVGK---------LLEKSPITAADIADYIYQQVAK 225 (270)
T ss_pred -------cccCchhHHHHHHH---------HhhcCCCCHHHHHHHHHHHHhC
Confidence 10000100111100 0112357899999999999975
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.3e-11 Score=104.00 Aligned_cols=213 Identities=11% Similarity=0.076 Sum_probs=133.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|+... .+.+...+ .....+++++.+|++++ +++..++
T Consensus 19 ~~la~~l~~~--G~~V~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 73 (258)
T PRK07890 19 RTLAVRAARA--GADVVLAARTAER---LDEVAAEI--------------DDLGRRALAVPTDITDE------DQCANLV 73 (258)
T ss_pred HHHHHHHHHc--CCEEEEEeCCHHH---HHHHHHHH--------------HHhCCceEEEecCCCCH------HHHHHHH
Confidence 3688999988 9999999985321 12222111 11134688999999886 4555444
Q ss_pred -------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCccccc
Q psy7539 81 -------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
.++|+|||+||.... ...+...+++|+.|+..+++++... ....+||++||.......
T Consensus 74 ~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~----- 148 (258)
T PRK07890 74 ALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ----- 148 (258)
T ss_pred HHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC-----
Confidence 367999999986421 1334568999999999999998752 122589999997653211
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.+|.+.+.+++.+.. ++++++++|||.++++.....
T Consensus 149 ----~~-----------------------------~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~ 195 (258)
T PRK07890 149 ----PK-----------------------------YGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGY 195 (258)
T ss_pred ----CC-----------------------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHH
Confidence 01 17899999999999988765 489999999999988542111
Q ss_pred CCc-ccCC-CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGW-TDNI-NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .... .....+....... .....+.+++|+|.+++.++...... ..++.+.+.++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~a~~~l~~~~~~~--~~G~~i~~~gg 254 (258)
T PRK07890 196 FRHQAGKYGVTVEQIYAETAAN---------SDLKRLPTDDEVASAVLFLASDLARA--ITGQTLDVNCG 254 (258)
T ss_pred hhhcccccCCCHHHHHHHHhhc---------CCccccCCHHHHHHHHHHHcCHhhhC--ccCcEEEeCCc
Confidence 000 0000 0001111111111 11224788999999999988753211 13566655544
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.4e-11 Score=104.75 Aligned_cols=143 Identities=15% Similarity=0.163 Sum_probs=101.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... +.++ . ...++++.+|+++. +++..++
T Consensus 18 ~~la~~l~~~--G~~Vi~~~r~~~~------~~~l---------------~--~~~~~~~~~Dl~d~------~~~~~~~ 66 (277)
T PRK05993 18 AYCARALQSD--GWRVFATCRKEED------VAAL---------------E--AEGLEAFQLDYAEP------ESIAALV 66 (277)
T ss_pred HHHHHHHHHC--CCEEEEEECCHHH------HHHH---------------H--HCCceEEEccCCCH------HHHHHHH
Confidence 3678888887 9999999996321 1111 1 12577899999976 4554443
Q ss_pred c--------CccEEEEcccccCcc-------hhHHHHHHHhHHH----HHHHHHHHHhcCCCccEEEEeccccccCCccc
Q psy7539 81 E--------TIHIVYHIAATVRFD-------DYMQTYVFLNTRG----TRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~--------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~g----t~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ .+|+|||+||..... ......+++|+.| +..+++.+++. +..+||++||.++....
T Consensus 67 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~--- 142 (277)
T PRK05993 67 AQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIVQCSSILGLVPM--- 142 (277)
T ss_pred HHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEEEECChhhcCCC---
Confidence 2 579999999874221 2345688999999 66677777763 66799999997653210
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
.+ ...|+.||.+.|.+.+.+.. +|+++++++||.+-.
T Consensus 143 ------~~-----------------------------~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T 183 (277)
T PRK05993 143 ------KY-----------------------------RGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIET 183 (277)
T ss_pred ------Cc-----------------------------cchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccC
Confidence 11 17899999999999877642 689999999997743
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.1e-11 Score=118.17 Aligned_cols=211 Identities=13% Similarity=0.114 Sum_probs=135.5
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+.+. .+.+...+ ... .++.++.+|++++ +++..+++
T Consensus 437 ~la~~L~~~--Ga~Vvl~~r~~~~---~~~~~~~l--------------~~~-~~v~~v~~Dvtd~------~~v~~~~~ 490 (681)
T PRK08324 437 ATAKRLAAE--GACVVLADLDEEA---AEAAAAEL--------------GGP-DRALGVACDVTDE------AAVQAAFE 490 (681)
T ss_pred HHHHHHHHC--cCEEEEEeCCHHH---HHHHHHHH--------------hcc-CcEEEEEecCCCH------HHHHHHHH
Confidence 578888887 8999999996321 11111111 111 4788999999986 45555443
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCC-ccEEEEeccccccCCccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHL-QLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~-~~~v~~SS~~~~~~~~~~~E 143 (318)
++|+|||+||.... ...+...+++|+.|+..+++++.+. .+. .+||++||..+....
T Consensus 491 ~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~----- 565 (681)
T PRK08324 491 EAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG----- 565 (681)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-----
Confidence 68999999996421 1334568899999999997777532 132 689999997653221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc-cccCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII-PIWKDP 218 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~-G~~~~~ 218 (318)
| ....|+.+|.+.+.+++.+.. .|+++.+++|+.+| +.....
T Consensus 566 -----~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~ 612 (681)
T PRK08324 566 -----P----------------------------NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT 612 (681)
T ss_pred -----C----------------------------CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc
Confidence 0 017899999999999988764 47999999999998 432100
Q ss_pred CCCcccCCCchHHHHHHHhcCcee----eEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIR----TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..|. .......+... .....+.....+++++|+|+++..++...... ..+.+|++.++
T Consensus 613 -~~~~--------~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~--~tG~~i~vdgG 674 (681)
T PRK08324 613 -GEWI--------EARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSK--TTGAIITVDGG 674 (681)
T ss_pred -chhh--------hhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccC--CcCCEEEECCC
Confidence 0110 00011111110 01234455678999999999999988422211 14789999887
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1e-10 Score=101.29 Aligned_cols=186 Identities=11% Similarity=0.060 Sum_probs=120.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+... .+.+. .....++.++.+|+++. +++..+++
T Consensus 15 ~la~~l~~~--G~~V~~~~r~~~~---~~~~~-----------------~~~~~~~~~~~~Dl~~~------~~i~~~~~ 66 (248)
T PRK10538 15 CITRRFIQQ--GHKVIATGRRQER---LQELK-----------------DELGDNLYIAQLDVRNR------AAIEEMLA 66 (248)
T ss_pred HHHHHHHHC--CCEEEEEECCHHH---HHHHH-----------------HHhccceEEEEecCCCH------HHHHHHHH
Confidence 688899988 9999999995321 11111 11124688899999986 45554443
Q ss_pred -------CccEEEEcccccC--------cchhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVR--------FDDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
++|+|||+||... ....++..+++|+.|+..+++++ .+ .+..++|++||..+....
T Consensus 67 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~---- 141 (248)
T PRK10538 67 SLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVE-RNHGHIINIGSTAGSWPY---- 141 (248)
T ss_pred HHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCcEEEEECCcccCCCC----
Confidence 6899999998631 12344568899999966666554 44 256789999997543210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+ ...|+.+|.+.|.+...... .++.+.+++||.+.|.....
T Consensus 142 -----~~-----------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~ 187 (248)
T PRK10538 142 -----AG-----------------------------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN 187 (248)
T ss_pred -----CC-----------------------------CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccch
Confidence 01 17899999999999887754 57999999999887643211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
. .+.+........ + . ...++..+|+|++++.++..+
T Consensus 188 ~-----~~~~~~~~~~~~--------~-~---~~~~~~~~dvA~~~~~l~~~~ 223 (248)
T PRK10538 188 V-----RFKGDDGKAEKT--------Y-Q---NTVALTPEDVSEAVWWVATLP 223 (248)
T ss_pred h-----hccCcHHHHHhh--------c-c---ccCCCCHHHHHHHHHHHhcCC
Confidence 0 011111000000 0 0 113468999999999988654
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.4e-11 Score=102.74 Aligned_cols=143 Identities=17% Similarity=0.169 Sum_probs=105.0
Q ss_pred ChhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
+++++.|+++ |+ +|+++.|+.... .....++.++.+|++++ +++..+
T Consensus 20 ~~la~~l~~~--G~~~V~~~~r~~~~~------------------------~~~~~~~~~~~~D~~~~------~~~~~~ 67 (238)
T PRK08264 20 RAFVEQLLAR--GAAKVYAAARDPESV------------------------TDLGPRVVPLQLDVTDP------ASVAAA 67 (238)
T ss_pred HHHHHHHHHC--CcccEEEEecChhhh------------------------hhcCCceEEEEecCCCH------HHHHHH
Confidence 3688899988 88 999999964321 11124788999999986 466666
Q ss_pred hc---CccEEEEcccc-cC-------cchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccccc
Q psy7539 80 SE---TIHIVYHIAAT-VR-------FDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 80 ~~---~~d~Vih~Aa~-~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
++ .+|+|||+||. .. ....+...+++|+.++.++++++... .+..+||++||..++....
T Consensus 68 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~------ 141 (238)
T PRK08264 68 AEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFP------ 141 (238)
T ss_pred HHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCC------
Confidence 65 58999999997 21 12334568889999999999987531 2456799999976543210
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
....|+.+|.+.|.+...+.. .+++++++||+.+.+
T Consensus 142 --------------------------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t 181 (238)
T PRK08264 142 --------------------------------NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDT 181 (238)
T ss_pred --------------------------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccc
Confidence 117899999999999887765 489999999997744
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-10 Score=99.46 Aligned_cols=204 Identities=12% Similarity=0.020 Sum_probs=133.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++..... .+ . ...+++++.+|++++ +++..++
T Consensus 11 ~~~a~~l~~~--G~~v~~~~r~~~------~~~~~~~-----~~------~-~~~~~~~~~~Dl~~~------~~~~~~~ 64 (230)
T PRK07041 11 LALARAFAAE--GARVTIASRSRD------RLAAAAR-----AL------G-GGAPVRTAALDITDE------AAVDAFF 64 (230)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HH------h-cCCceEEEEccCCCH------HHHHHHH
Confidence 3688999988 999999999532 1221110 00 0 124688999999987 5777766
Q ss_pred c---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCC
Q psy7539 81 E---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPV 150 (318)
Q Consensus 81 ~---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~ 150 (318)
+ .+|++||+||.... .......+++|+.++.+++++... .+..+||++||..++... ++.
T Consensus 65 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~g~iv~~ss~~~~~~~---------~~~ 134 (230)
T PRK07041 65 AEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARI-APGGSLTFVSGFAAVRPS---------ASG 134 (230)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh-cCCeEEEEECchhhcCCC---------Ccc
Confidence 5 47999999997422 133456889999999999996654 356799999998765321 111
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccccccCCCCCCcccCCCc
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIIIPIWKDPLPGWTDNING 228 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~ 228 (318)
..|+.+|.+.+.+++.... .+++++.++|+.+-.+...... .. .
T Consensus 135 -----------------------------~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~---~~--~ 180 (230)
T PRK07041 135 -----------------------------VLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLA---GD--A 180 (230)
T ss_pred -----------------------------hHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhh---cc--c
Confidence 7899999999999988765 4678889999876432110000 00 0
Q ss_pred hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 229 PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...++....... + ...+...+|+|+++..++..... .+..|++.++
T Consensus 181 ~~~~~~~~~~~~----~-----~~~~~~~~dva~~~~~l~~~~~~----~G~~~~v~gg 226 (230)
T PRK07041 181 REAMFAAAAERL----P-----ARRVGQPEDVANAILFLAANGFT----TGSTVLVDGG 226 (230)
T ss_pred hHHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhcCCCc----CCcEEEeCCC
Confidence 011222221111 1 11245679999999999876433 4789998876
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.6e-11 Score=103.46 Aligned_cols=204 Identities=13% Similarity=0.096 Sum_probs=131.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+. . .....+++++.+|++++ +++..+++
T Consensus 23 ~la~~l~~~--G~~v~~~~~~~----~----------------------~~~~~~~~~~~~D~~~~------~~~~~~~~ 68 (252)
T PRK08220 23 AVALAFVEA--GAKVIGFDQAF----L----------------------TQEDYPFATFVLDVSDA------AAVAQVCQ 68 (252)
T ss_pred HHHHHHHHC--CCEEEEEecch----h----------------------hhcCCceEEEEecCCCH------HHHHHHHH
Confidence 578889888 99999999863 0 11234688899999876 46666554
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
.+|+|||+||.... ...+...+++|+.++..+++++... .+..+||++||.......
T Consensus 69 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~------ 142 (252)
T PRK08220 69 RLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPR------ 142 (252)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCC------
Confidence 47999999997532 2345578999999999999887532 234579999997543210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+ ...|+.+|.+.+.+++.+.. +++++++++|+.+.++......
T Consensus 143 ---~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~ 190 (252)
T PRK08220 143 ---IG-----------------------------MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLW 190 (252)
T ss_pred ---CC-----------------------------CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhc
Confidence 01 17899999999999877764 5899999999988775321110
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ........+...... .........+.+++|+|++++.++...... ..+.++.+.++
T Consensus 191 ~---~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~dva~~~~~l~~~~~~~--~~g~~i~~~gg 247 (252)
T PRK08220 191 V---DEDGEQQVIAGFPEQ-----FKLGIPLGKIARPQEIANAVLFLASDLASH--ITLQDIVVDGG 247 (252)
T ss_pred c---chhhhhhhhhhHHHH-----HhhcCCCcccCCHHHHHHHHHHHhcchhcC--ccCcEEEECCC
Confidence 0 000000000000000 001112346899999999999988654321 13556666554
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.3e-11 Score=106.12 Aligned_cols=205 Identities=11% Similarity=-0.004 Sum_probs=135.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+|+++|+++ |++|+++.|+... ..+.+...+ .....++.++.+|+++. +.+..+++
T Consensus 61 ~la~~l~~~--G~~V~l~~r~~~~--~~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~~ 116 (290)
T PRK06701 61 AVAVLFAKE--GADIAIVYLDEHE--DANETKQRV--------------EKEGVKCLLIPGDVSDE------AFCKDAVE 116 (290)
T ss_pred HHHHHHHHC--CCEEEEEeCCcch--HHHHHHHHH--------------HhcCCeEEEEEccCCCH------HHHHHHHH
Confidence 688899988 9999999886422 122222111 11124688899999876 45555443
Q ss_pred -------CccEEEEcccccCcc--------hhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 82 -------TIHIVYHIAATVRFD--------DYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~~--------~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
++|+|||+||..... ..+...++.|+.++.++++++... ....+||++||..++....
T Consensus 117 ~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~------ 190 (290)
T PRK06701 117 ETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE------ 190 (290)
T ss_pred HHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC------
Confidence 689999999964211 234568999999999999998752 1235899999977654211
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
....|+.+|.+.+.+++.++. .|++++.++||.+..+...
T Consensus 191 --------------------------------~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~---- 234 (290)
T PRK06701 191 --------------------------------TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIP---- 234 (290)
T ss_pred --------------------------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccc----
Confidence 016799999999999888876 4899999999988664211
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ...+..+.. ......+.+++|+|++++.++...... -.+..|++.++
T Consensus 235 ---~~~~-~~~~~~~~~---------~~~~~~~~~~~dva~~~~~ll~~~~~~--~~G~~i~idgg 285 (290)
T PRK06701 235 ---SDFD-EEKVSQFGS---------NTPMQRPGQPEELAPAYVFLASPDSSY--ITGQMLHVNGG 285 (290)
T ss_pred ---cccC-HHHHHHHHh---------cCCcCCCcCHHHHHHHHHHHcCcccCC--ccCcEEEeCCC
Confidence 0011 111111111 112345789999999999988764321 13678888776
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.4e-10 Score=101.55 Aligned_cols=208 Identities=13% Similarity=0.072 Sum_probs=132.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|++..|+..... .+.+.+.. .....++.++.+|++++ +++..++
T Consensus 63 ~aia~~L~~~--G~~Vi~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 119 (294)
T PRK07985 63 RAAAIAYARE--GADVAISYLPVEEED-AQDVKKII--------------EECGRKAVLLPGDLSDE------KFARSLV 119 (294)
T ss_pred HHHHHHHHHC--CCEEEEecCCcchhh-HHHHHHHH--------------HHcCCeEEEEEccCCCH------HHHHHHH
Confidence 3688999988 999988776533222 22232221 11224678899999986 4554443
Q ss_pred -------cCccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccc
Q psy7539 81 -------ETIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
.++|++||+||... . ...+...+++|+.|+..+++++... ..-.+||++||..++...
T Consensus 120 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~------ 193 (294)
T PRK07985 120 HEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS------ 193 (294)
T ss_pred HHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC------
Confidence 35899999998631 1 1335578999999999999988752 122589999997764321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
| ....|+.||.+.+.+.+.++. +|+++.+++||.|.++....
T Consensus 194 ----~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~-- 239 (294)
T PRK07985 194 ----P----------------------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQIS-- 239 (294)
T ss_pred ----C----------------------------CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccc--
Confidence 0 016899999999988877754 58999999999997753210
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+ . .+......+... . ....+...+|+|.++..++...... ..+..+.+.++
T Consensus 240 ~---~--~~~~~~~~~~~~----~-----~~~r~~~pedva~~~~fL~s~~~~~--itG~~i~vdgG 290 (294)
T PRK07985 240 G---G--QTQDKIPQFGQQ----T-----PMKRAGQPAELAPVYVYLASQESSY--VTAEVHGVCGG 290 (294)
T ss_pred c---C--CCHHHHHHHhcc----C-----CCCCCCCHHHHHHHHHhhhChhcCC--ccccEEeeCCC
Confidence 0 0 011111111111 0 1123567899999999988654321 13667777665
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.1e-11 Score=102.59 Aligned_cols=184 Identities=11% Similarity=-0.005 Sum_probs=121.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+|+++|+++ |.+|+++.|+.+. .+.+.+.. .....++.++.+|++++ +++..+++
T Consensus 21 ~la~~l~~~--G~~V~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~~ 75 (241)
T PRK07454 21 ATALAFAKA--GWDLALVARSQDA---LEALAAEL--------------RSTGVKAAAYSIDLSNP------EAIAPGIA 75 (241)
T ss_pred HHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HhCCCcEEEEEccCCCH------HHHHHHHH
Confidence 688999988 8999999996321 11222111 11124788999999986 45554443
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
++|+|||+||.... .......+++|+.++.++++++... .+..++|++||..++....
T Consensus 76 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----- 150 (241)
T PRK07454 76 ELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP----- 150 (241)
T ss_pred HHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC-----
Confidence 58999999997422 1234567889999988877776331 2457899999976653210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
+ ...|+.+|.+.+.+.+.+.. .|++++++|||.+-.+...
T Consensus 151 ----~-----------------------------~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~--- 194 (241)
T PRK07454 151 ----Q-----------------------------WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWD--- 194 (241)
T ss_pred ----C-----------------------------ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccc---
Confidence 0 17899999999998877653 5899999999977442100
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
.. ..... .....++..+|+|++++.++..+.
T Consensus 195 ---~~--------------~~~~~----~~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 195 ---TE--------------TVQAD----FDRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred ---cc--------------ccccc----cccccCCCHHHHHHHHHHHHcCCc
Confidence 00 00000 001235789999999999987764
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.6e-11 Score=102.38 Aligned_cols=204 Identities=11% Similarity=0.045 Sum_probs=130.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. . ..+.+.... .....++.++.+|+++. +++..++
T Consensus 16 ~~la~~l~~~--g~~vi~~~r~~~-~-~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~v~~~~ 71 (245)
T PRK12824 16 SAIARELLND--GYRVIATYFSGN-D-CAKDWFEEY--------------GFTEDQVRLKELDVTDT------EECAEAL 71 (245)
T ss_pred HHHHHHHHHc--CCEEEEEeCCcH-H-HHHHHHHHh--------------hccCCeEEEEEcCCCCH------HHHHHHH
Confidence 3688889888 899999999743 1 111111110 11234688999999986 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHH----HHhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNL----SKQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~----a~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... ....+..++.|+.++.++..+ +++. +..+||++||..++...
T Consensus 72 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~~~~~~~---- 146 (245)
T PRK12824 72 AEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSVNGLKGQ---- 146 (245)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECChhhccCC----
Confidence 3 58999999996421 233456889999998887554 4543 56799999997664321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+ ....|+.+|.+.+.+++.+.. .++++++++|+.+.++....
T Consensus 147 ------~----------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 192 (245)
T PRK12824 147 ------F----------------------------GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ 192 (245)
T ss_pred ------C----------------------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh
Confidence 0 016899999999988877654 57999999999886542211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. . ......+... .....+...+|+++++..++..... .-.++.+++.++
T Consensus 193 -------~-~-~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~~~~--~~~G~~~~~~~g 241 (245)
T PRK12824 193 -------M-G-PEVLQSIVNQ---------IPMKRLGTPEEIAAAVAFLVSEAAG--FITGETISINGG 241 (245)
T ss_pred -------c-C-HHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccc--CccCcEEEECCC
Confidence 1 1 1111111111 1123456789999999888754322 124788998887
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.8e-11 Score=101.89 Aligned_cols=178 Identities=12% Similarity=0.045 Sum_probs=119.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+. +++.+... .+ .. ..++.++.+|++++ +++.+++
T Consensus 16 ~~la~~l~~~--G~~v~~~~r~~------~~~~~~~~-----~~------~~-~~~~~~~~~Dl~~~------~~i~~~~ 69 (257)
T PRK07024 16 QALAREYARQ--GATLGLVARRT------DALQAFAA-----RL------PK-AARVSVYAADVRDA------DALAAAA 69 (257)
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHHH-----hc------cc-CCeeEEEEcCCCCH------HHHHHHH
Confidence 3688999988 89999999863 12222111 00 11 12788999999986 4565544
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHH----HHhcCCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNL----SKQMIHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~----a~~~~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ .+|+|||+||.... ...+...+++|+.|+.+++++ +.+. +..+||++||..+....
T Consensus 70 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~~~~~~~--- 145 (257)
T PRK07024 70 ADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASVAGVRGL--- 145 (257)
T ss_pred HHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcCCC---
Confidence 3 37999999997421 133567899999999997774 4442 55789999997653210
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
| ....|+.||.+.+.+...+.. +|++++++|||.+.++...
T Consensus 146 -------~----------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~ 190 (257)
T PRK07024 146 -------P----------------------------GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTA 190 (257)
T ss_pred -------C----------------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhh
Confidence 1 016899999999999877653 6899999999988552110
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
. .......++..++++..++.++.+.
T Consensus 191 ~----------------------------~~~~~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 191 H----------------------------NPYPMPFLMDADRFAARAARAIARG 216 (257)
T ss_pred c----------------------------CCCCCCCccCHHHHHHHHHHHHhCC
Confidence 0 0000112468999999999998764
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.3e-11 Score=103.97 Aligned_cols=197 Identities=10% Similarity=0.006 Sum_probs=121.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|++++|+.+. .+.+.+.. .....++.++.+|++++ +++..++
T Consensus 16 ~~ia~~l~~~--G~~v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 70 (257)
T PRK09291 16 REVALRLARK--GHNVIAGVQIAPQ---VTALRAEA--------------ARRGLALRVEKLDLTDA------IDRAQAA 70 (257)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCcceEEEeeCCCH------HHHHHHh
Confidence 3678889888 9999999996321 11121110 11224688999999987 5677766
Q ss_pred c-CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccccccCCC
Q psy7539 81 E-TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLEEKTYPP 148 (318)
Q Consensus 81 ~-~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~ 148 (318)
. ++|+|||+||.... .......+++|+.++.++.+.+ .+. +.++||++||..+.... .
T Consensus 71 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~~---------~ 140 (257)
T PRK09291 71 EWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSMAGLITG---------P 140 (257)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcChhhccCC---------C
Confidence 6 89999999996421 1234567888998877666543 442 55799999997543210 0
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCccc
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTD 224 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~ 224 (318)
. ...|+.||.+.|.+.+.+.. .|++++++|||.+......
T Consensus 141 ~-----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~------- 184 (257)
T PRK09291 141 F-----------------------------TGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND------- 184 (257)
T ss_pred C-----------------------------cchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh-------
Confidence 0 17899999999998876543 5899999999966321100
Q ss_pred CCCchHHHHHHHhcCcee-eEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 225 NINGPTGLLIGAGKGIIR-TMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
.... .+ ......... ............+..+|+++.++.++..+
T Consensus 185 ~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (257)
T PRK09291 185 TMAE--TP-KRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPAD 229 (257)
T ss_pred hhhh--hh-hhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCC
Confidence 0000 00 000000000 00011223445678999999998887654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-10 Score=101.03 Aligned_cols=207 Identities=13% Similarity=0.042 Sum_probs=129.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+.+.|+.+. .+.+...+ .....++.++.+|++++ ++++.+++
T Consensus 27 ~la~~l~~~--G~~V~~~~r~~~~---~~~~~~~i--------------~~~~~~~~~~~~Dl~d~------~~i~~~~~ 81 (259)
T PRK08213 27 QIAEALGEA--GARVVLSARKAEE---LEEAAAHL--------------EALGIDALWIAADVADE------ADIERLAE 81 (259)
T ss_pred HHHHHHHHc--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCeEEEEEccCCCH------HHHHHHHH
Confidence 688999988 8999999885321 11111111 11124678899999986 45644432
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
++|+|||+||.... ...+...++.|+.++.++++++... .+..+||++||..++....+.
T Consensus 82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-- 159 (259)
T PRK08213 82 ETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-- 159 (259)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc--
Confidence 58999999996421 2334567889999999999987642 245689999997654321100
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
..+ ...|+.+|++.|.++..+.+ +|+++.+++|+.+-.....
T Consensus 160 ---~~~-----------------------------~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~-- 205 (259)
T PRK08213 160 ---VMD-----------------------------TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR-- 205 (259)
T ss_pred ---ccC-----------------------------cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh--
Confidence 001 17899999999999988765 4789999999876432110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+. ..+...+.... ...-+...+|++.++..++...... ..+..+++.++
T Consensus 206 -----~~~--~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~~--~~G~~~~~~~~ 255 (259)
T PRK08213 206 -----GTL--ERLGEDLLAHT---------PLGRLGDDEDLKGAALLLASDASKH--ITGQILAVDGG 255 (259)
T ss_pred -----hhh--HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccC--ccCCEEEECCC
Confidence 110 11122222111 1123456899998888877553321 23677777655
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.8e-10 Score=98.07 Aligned_cols=206 Identities=14% Similarity=0.087 Sum_probs=129.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+... ...+..... .....++.++.+|++++ +++.+++
T Consensus 19 ~~la~~l~~~--g~~v~~~~~~~~~-~~~~~~~~~---------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 74 (245)
T PRK12937 19 AAIARRLAAD--GFAVAVNYAGSAA-AADELVAEI---------------EAAGGRAIAVQADVADA------AAVTRLF 74 (245)
T ss_pred HHHHHHHHHC--CCEEEEecCCCHH-HHHHHHHHH---------------HhcCCeEEEEECCCCCH------HHHHHHH
Confidence 3688899988 8988887775321 111111111 11234788999999986 4666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ ++|+|||+||.... ...+...+++|+.++.++++++.+. ....+||++||.......
T Consensus 75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------- 147 (245)
T PRK12937 75 DAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL------- 147 (245)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC-------
Confidence 4 68999999997431 1234567889999999999888652 122489999986543210
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
++ ...|+.+|.+.+.+++.+.. .++.+++++||.+-.....
T Consensus 148 --~~-----------------------------~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~---- 192 (245)
T PRK12937 148 --PG-----------------------------YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF---- 192 (245)
T ss_pred --CC-----------------------------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc----
Confidence 01 17899999999999987654 4789999999976442100
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .....+..+.... ...-+.+++|++.++..++..... ...+..+++.++
T Consensus 193 --~~--~~~~~~~~~~~~~---------~~~~~~~~~d~a~~~~~l~~~~~~--~~~g~~~~~~~g 243 (245)
T PRK12937 193 --NG--KSAEQIDQLAGLA---------PLERLGTPEEIAAAVAFLAGPDGA--WVNGQVLRVNGG 243 (245)
T ss_pred --cc--CCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCcccc--CccccEEEeCCC
Confidence 00 0111222222211 112355789999999888865432 123678888765
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.5e-11 Score=99.87 Aligned_cols=204 Identities=16% Similarity=0.049 Sum_probs=141.7
Q ss_pred EEeccCCCCCCCCCHHHHHHHh--cCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecccc
Q psy7539 59 PINGDVAVPDLGISAEDRQMLS--ETIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYC 134 (318)
Q Consensus 59 ~~~gDl~~~~~gl~~~~~~~~~--~~~d~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~ 134 (318)
++..|+-+- +.++++. +.+|.+||..|..+.- ..-....++|+.|..|+++.|+++ +. ++...||.++
T Consensus 91 yIy~DILD~------K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL-~iFVPSTIGA 162 (366)
T KOG2774|consen 91 YIYLDILDQ------KSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KL-KVFVPSTIGA 162 (366)
T ss_pred chhhhhhcc------ccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-Ce-eEeecccccc
Confidence 556666554 4566655 3799999999875322 222357789999999999999985 55 4555788888
Q ss_pred ccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEeccccccc
Q psy7539 135 HPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIP 213 (318)
Q Consensus 135 ~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G 213 (318)
.|...+-...+... .+.+.+.||.||.-+|.+-+.+.. .|+.+..+|.+.++.
T Consensus 163 FGPtSPRNPTPdlt--------------------------IQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is 216 (366)
T KOG2774|consen 163 FGPTSPRNPTPDLT--------------------------IQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIIS 216 (366)
T ss_pred cCCCCCCCCCCCee--------------------------eecCceeechhHHHHHHHHHHHHhhcCccceecccCcccc
Confidence 88754221111000 112239999999999999988877 899999999887776
Q ss_pred ccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 214 IWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
....+ .|- .-| ....+....+...-..+..++.++.++|..|+-++++..+..+... -+.++||+.+- ..|
T Consensus 217 ~~~pg-ggt--tdy-a~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~--lkrr~ynvt~~---sft 287 (366)
T KOG2774|consen 217 ATKPG-GGT--TDY-AIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQS--LKRRTYNVTGF---SFT 287 (366)
T ss_pred cCCCC-CCc--chh-HHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHH--hhhheeeecee---ccC
Confidence 54322 111 112 2344444554333355668899999999999999999888765531 24789999986 788
Q ss_pred HHHHHHHHHHhh
Q psy7539 294 WYDIIENGKDIA 305 (318)
Q Consensus 294 ~~el~~~i~~~~ 305 (318)
-.|+++.+++.+
T Consensus 288 pee~~~~~~~~~ 299 (366)
T KOG2774|consen 288 PEEIADAIRRVM 299 (366)
T ss_pred HHHHHHHHHhhC
Confidence 999999999887
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.1e-10 Score=99.41 Aligned_cols=209 Identities=12% Similarity=0.075 Sum_probs=152.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ +++|++++|+...... .. ..+++..+|+.++ ..+...+
T Consensus 14 ~~~~~~L~~~--~~~v~~~~r~~~~~~~-----------------------~~-~~v~~~~~d~~~~------~~l~~a~ 61 (275)
T COG0702 14 GAVVRELLAR--GHEVRAAVRNPEAAAA-----------------------LA-GGVEVVLGDLRDP------KSLVAGA 61 (275)
T ss_pred HHHHHHHHhC--CCEEEEEEeCHHHHHh-----------------------hc-CCcEEEEeccCCH------hHHHHHh
Confidence 4789999999 9999999997543321 11 6899999999988 5888999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|.++++.+... ... ...........+..+.+. .++++++++|...+...
T Consensus 62 ~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~--~~~~~~~~~s~~~~~~~----------------------- 113 (275)
T COG0702 62 KGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLGADAA----------------------- 113 (275)
T ss_pred ccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc--CCceEEEEeccCCCCCC-----------------------
Confidence 99999999998765 332 233444555555555555 26788999988765321
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
.+..|..+|..+|+++... |++.+++|+...|... .... .......+.
T Consensus 114 -----------------~~~~~~~~~~~~e~~l~~s---g~~~t~lr~~~~~~~~-----------~~~~-~~~~~~~~~ 161 (275)
T COG0702 114 -----------------SPSALARAKAAVEAALRSS---GIPYTTLRRAAFYLGA-----------GAAF-IEAAEAAGL 161 (275)
T ss_pred -----------------CccHHHHHHHHHHHHHHhc---CCCeEEEecCeeeecc-----------chhH-HHHHHhhCC
Confidence 1178999999999999988 8899999966554421 1111 122222332
Q ss_pred eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 241 IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 241 ~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
.....+.....++.++|++.++..++..+.. .+..|.++++ ...+..++.+.+.+..|.+.
T Consensus 162 --~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~----~~~~~~l~g~--~~~~~~~~~~~l~~~~gr~~ 222 (275)
T COG0702 162 --PVIPRGIGRLSPIAVDDVAEALAAALDAPAT----AGRTYELAGP--EALTLAELASGLDYTIGRPV 222 (275)
T ss_pred --ceecCCCCceeeeEHHHHHHHHHHHhcCCcc----cCcEEEccCC--ceecHHHHHHHHHHHhCCcc
Confidence 2223334489999999999999999988764 3889999998 88999999999999886554
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.3e-10 Score=97.91 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=126.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+.. .+.+.. .....++.++.+|+++. ++...++
T Consensus 20 ~~la~~l~~~--g~~v~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 71 (249)
T PRK06500 20 LETARQFLAE--GARVAITGRDPA------SLEAAR--------------AELGESALVIRADAGDV------AAQKALA 71 (249)
T ss_pred HHHHHHHHHC--CCEEEEecCCHH------HHHHHH--------------HHhCCceEEEEecCCCH------HHHHHHH
Confidence 3688999988 899999988532 111110 11234678889999875 3443332
Q ss_pred -------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 -------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
.++|+|||+||..... ..+...+++|+.++.++++++... ....++|++||.......
T Consensus 72 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~------- 144 (249)
T PRK06500 72 QALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM------- 144 (249)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC-------
Confidence 3689999999974321 334568999999999999999742 123478888775432110
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
+. ...|+.+|.+.|.+++.+.. +|++++++|||.+.++..... +
T Consensus 145 --~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~-~ 192 (249)
T PRK06500 145 --PN-----------------------------SSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKL-G 192 (249)
T ss_pred --CC-----------------------------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhh-c
Confidence 00 17899999999999977654 589999999998877421100 0
Q ss_pred cccCCCch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..... ..+........ + ..-+...+|+++++..++...... ..+..+.+.++
T Consensus 193 ---~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~va~~~~~l~~~~~~~--~~g~~i~~~gg 245 (249)
T PRK06500 193 ---LPEATLDAVAAQIQALV----P-----LGRFGTPEEIAKAVLYLASDESAF--IVGSEIIVDGG 245 (249)
T ss_pred ---cCccchHHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHcCccccC--ccCCeEEECCC
Confidence 00000 11111111111 0 112458899999999988643321 12445555444
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.8e-10 Score=95.97 Aligned_cols=194 Identities=10% Similarity=-0.030 Sum_probs=125.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+.... . ..+++.+|++++ +++..+++
T Consensus 18 ~ia~~l~~~--G~~v~~~~r~~~~~------------------------~----~~~~~~~D~~~~------~~~~~~~~ 61 (234)
T PRK07577 18 ALSLRLANL--GHQVIGIARSAIDD------------------------F----PGELFACDLADI------EQTAATLA 61 (234)
T ss_pred HHHHHHHHC--CCEEEEEeCCcccc------------------------c----CceEEEeeCCCH------HHHHHHHH
Confidence 678888888 89999999964321 0 124688999886 45555444
Q ss_pred ------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccccc
Q psy7539 82 ------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 82 ------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
++|+|||+||.... .......+++|+.++.++.+++... .+..++|++||.+.++..
T Consensus 62 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------- 134 (234)
T PRK07577 62 QINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL------- 134 (234)
T ss_pred HHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC-------
Confidence 68999999997532 1234467889999988877665421 256799999997654321
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
. ...|+.+|...|.++..+.. .|++++++|||.+..+....
T Consensus 135 ---~-----------------------------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~--- 179 (234)
T PRK07577 135 ---D-----------------------------RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQ--- 179 (234)
T ss_pred ---C-----------------------------chHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccc---
Confidence 0 17899999999988877654 58999999999886532100
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
................ ..-.+...+|+|.+++.++..+... ..+..+++.++
T Consensus 180 ---~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~~--~~g~~~~~~g~ 231 (234)
T PRK07577 180 ---TRPVGSEEEKRVLASI---------PMRRLGTPEEVAAAIAFLLSDDAGF--ITGQVLGVDGG 231 (234)
T ss_pred ---ccccchhHHHHHhhcC---------CCCCCcCHHHHHHHHHHHhCcccCC--ccceEEEecCC
Confidence 0000011111111110 1112457899999999998764321 23677777665
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-10 Score=97.85 Aligned_cols=177 Identities=11% Similarity=0.057 Sum_probs=121.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++++. .....++.++.+|+++. +++..++
T Consensus 15 ~~la~~L~~~--G~~V~~~~r~~------~~~~~~---------------~~~~~~~~~~~~D~~~~------~~~~~~~ 65 (240)
T PRK06101 15 KQLALDYAKQ--GWQVIACGRNQ------SVLDEL---------------HTQSANIFTLAFDVTDH------PGTKAAL 65 (240)
T ss_pred HHHHHHHHhC--CCEEEEEECCH------HHHHHH---------------HHhcCCCeEEEeeCCCH------HHHHHHH
Confidence 3688999988 99999999952 222222 11124688899999986 5677666
Q ss_pred cC----ccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCC
Q psy7539 81 ET----IHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPP 148 (318)
Q Consensus 81 ~~----~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~ 148 (318)
++ +|.+||+||.... ....+..+++|+.|+.++++++... .+..++|++||...... .
T Consensus 66 ~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~----------~ 135 (240)
T PRK06101 66 SQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA----------L 135 (240)
T ss_pred HhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC----------C
Confidence 53 6899999985321 1224568999999999999998752 12357999999654221 0
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCccc
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTD 224 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~ 224 (318)
| ....|+.+|...+.+.+.+.. +|++++++|||.+.++....
T Consensus 136 ~----------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~------ 181 (240)
T PRK06101 136 P----------------------------RAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK------ 181 (240)
T ss_pred C----------------------------CCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC------
Confidence 1 017899999999999877652 68999999999886632110
Q ss_pred CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 225 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
... . ...++..+|+|+.++.+++...
T Consensus 182 ---------------~~~----~---~~~~~~~~~~a~~i~~~i~~~~ 207 (240)
T PRK06101 182 ---------------NTF----A---MPMIITVEQASQEIRAQLARGK 207 (240)
T ss_pred ---------------CCC----C---CCcccCHHHHHHHHHHHHhcCC
Confidence 000 0 0124789999999999998753
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.5e-10 Score=96.05 Aligned_cols=204 Identities=8% Similarity=0.040 Sum_probs=130.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. +.+.+.+ .....++.++.+|++++ +++..++
T Consensus 19 ~~ia~~l~~~--G~~vi~~~r~~~-----~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 71 (248)
T TIGR01832 19 QGIAVGLAEA--GADIVGAGRSEP-----SETQQQV--------------EALGRRFLSLTADLSDI------EAIKALV 71 (248)
T ss_pred HHHHHHHHHC--CCEEEEEcCchH-----HHHHHHH--------------HhcCCceEEEECCCCCH------HHHHHHH
Confidence 3688999988 999999988531 1111111 11234688999999986 4555443
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~ 142 (318)
.++|+|||+||.... ...+...+++|+.++.++++++... .+ ..++|++||..++....
T Consensus 72 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--- 148 (248)
T TIGR01832 72 DSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI--- 148 (248)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC---
Confidence 258999999997431 1345567899999999999887531 12 45899999976653210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
....|+.+|.+.+.+.+.+++ +|+++++++||.+......
T Consensus 149 -----------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~- 192 (248)
T TIGR01832 149 -----------------------------------RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQ- 192 (248)
T ss_pred -----------------------------------CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchh-
Confidence 016899999999999988766 4899999999988553211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+............ . . ....++..+|+|++++.++...... ..+.++.+.++
T Consensus 193 ------~~~~~~~~~~~~~~-~---~-----~~~~~~~~~dva~~~~~l~s~~~~~--~~G~~i~~dgg 244 (248)
T TIGR01832 193 ------ALRADEDRNAAILE-R---I-----PAGRWGTPDDIGGPAVFLASSASDY--VNGYTLAVDGG 244 (248)
T ss_pred ------ccccChHHHHHHHh-c---C-----CCCCCcCHHHHHHHHHHHcCccccC--cCCcEEEeCCC
Confidence 11111111111111 0 1 1246889999999999998653321 12555555443
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.7e-10 Score=97.43 Aligned_cols=202 Identities=12% Similarity=-0.017 Sum_probs=128.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |.+|+++.|+... . +.+. .....++.++.+|++++ +++..++
T Consensus 24 ~~~a~~l~~~--g~~v~~~~~~~~~--~-~~~~-----------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 75 (255)
T PRK05717 24 LGIAAWLIAE--GWQVVLADLDRER--G-SKVA-----------------KALGENAWFIAMDVADE------AQVAAGV 75 (255)
T ss_pred HHHHHHHHHc--CCEEEEEcCCHHH--H-HHHH-----------------HHcCCceEEEEccCCCH------HHHHHHH
Confidence 3688999988 8999998875321 1 1111 11124688999999986 3443332
Q ss_pred -------cCccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccc
Q psy7539 81 -------ETIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
..+|+|||+||.... ...+...+++|+.++.++++++... ....++|++||..+....
T Consensus 76 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~---- 151 (255)
T PRK05717 76 AEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE---- 151 (255)
T ss_pred HHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC----
Confidence 258999999997532 1234578999999999999999642 123579999997553221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.+|.+.+.+++.+.. .++++.+++||.+.+.....
T Consensus 152 ------~----------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~- 196 (255)
T PRK05717 152 ------P----------------------------DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQ- 196 (255)
T ss_pred ------C----------------------------CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccc-
Confidence 0 017899999999999988866 35899999999886642110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ...+ ....... .+ ...+.+.+|++.++..++..... ...+..+.+.++
T Consensus 197 ------~~-~~~~-~~~~~~~---~~-----~~~~~~~~~va~~~~~l~~~~~~--~~~g~~~~~~gg 246 (255)
T PRK05717 197 ------RR-AEPL-SEADHAQ---HP-----AGRVGTVEDVAAMVAWLLSRQAG--FVTGQEFVVDGG 246 (255)
T ss_pred ------cc-chHH-HHHHhhc---CC-----CCCCcCHHHHHHHHHHHcCchhc--CccCcEEEECCC
Confidence 00 0011 0111110 00 12467889999999888764322 113667777655
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.1e-10 Score=97.73 Aligned_cols=206 Identities=10% Similarity=0.040 Sum_probs=129.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+... .+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 24 ~~~a~~l~~~--G~~Vi~~~r~~~~---~~~~~~~l--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 78 (263)
T PRK07814 24 AAIALAFAEA--GADVLIAARTESQ---LDEVAEQI--------------RAAGRRAHVVAADLAHP------EATAGLA 78 (263)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHH
Confidence 3688899988 9999999995321 11111111 11134688899999986 4555444
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...+++|+.++.++.+++... .+..+||++||.++....
T Consensus 79 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---- 154 (263)
T PRK07814 79 GQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG---- 154 (263)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCC----
Confidence 3 68999999986321 1335668999999999999998741 245689999997553210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+. ..|+.||.+.+.+++.+.. .++.++.++||.+......
T Consensus 155 -----~~~-----------------------------~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~-- 198 (263)
T PRK07814 155 -----RGF-----------------------------AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALE-- 198 (263)
T ss_pred -----CCC-----------------------------chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhh--
Confidence 111 7899999999999988766 3578888999877432110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.......+ .....+. .....+...+|+|++++.++...... ..+..+.+.++
T Consensus 199 -----~~~~~~~~-~~~~~~~--------~~~~~~~~~~~va~~~~~l~~~~~~~--~~g~~~~~~~~ 250 (263)
T PRK07814 199 -----VVAANDEL-RAPMEKA--------TPLRRLGDPEDIAAAAVYLASPAGSY--LTGKTLEVDGG 250 (263)
T ss_pred -----hccCCHHH-HHHHHhc--------CCCCCCcCHHHHHHHHHHHcCccccC--cCCCEEEECCC
Confidence 00000111 1111111 01223568899999999988653221 13667777554
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.1e-10 Score=96.61 Aligned_cols=193 Identities=14% Similarity=0.062 Sum_probs=125.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++++|+.. ..+++.+.+ ... .+++++.+|+.+. +++..++
T Consensus 20 ~~la~~l~~~--g~~V~~~~r~~~---~~~~~~~~l--------------~~~-~~~~~~~~D~~~~------~~~~~~~ 73 (237)
T PRK07326 20 FAIAEALLAE--GYKVAITARDQK---ELEEAAAEL--------------NNK-GNVLGLAADVRDE------ADVQRAV 73 (237)
T ss_pred HHHHHHHHHC--CCEEEEeeCCHH---HHHHHHHHH--------------hcc-CcEEEEEccCCCH------HHHHHHH
Confidence 3678899887 899999999532 111221111 111 4688999999876 4555444
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|+|||+||.... ...+...+++|+.++..+++++... .+..++|++||..+....
T Consensus 74 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------ 147 (237)
T PRK07326 74 DAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF------ 147 (237)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC------
Confidence 3 68999999987432 1234567899999999998887642 134679999997653210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+ ...|+.+|++.+.+.+.+.. .|++++++||+.+......
T Consensus 148 ---~~-----------------------------~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~--- 192 (237)
T PRK07326 148 ---AG-----------------------------GAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNG--- 192 (237)
T ss_pred ---CC-----------------------------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccc---
Confidence 00 16899999999888877643 5899999999977442110
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . .. .....+..+|++..++.++..+... ......+.++
T Consensus 193 ----~~---------------~---~~--~~~~~~~~~d~a~~~~~~l~~~~~~---~~~~~~~~~~ 232 (237)
T PRK07326 193 ----HT---------------P---SE--KDAWKIQPEDIAQLVLDLLKMPPRT---LPSKIEVRPS 232 (237)
T ss_pred ----cc---------------c---ch--hhhccCCHHHHHHHHHHHHhCCccc---cccceEEecC
Confidence 00 0 00 0012378899999999999776532 2445555544
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.3e-10 Score=97.81 Aligned_cols=212 Identities=12% Similarity=0.068 Sum_probs=129.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCC-CCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKK-NKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~-~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
+++++.|+++ |++|+++.+... ..+..+.+.+.+ .....+++++.+|++++ +++..+
T Consensus 22 ~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l--------------~~~~~~~~~~~~D~~~~------~~~~~~ 79 (257)
T PRK12744 22 GLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAV--------------KAAGAKAVAFQADLTTA------AAVEKL 79 (257)
T ss_pred HHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHH--------------HHhCCcEEEEecCcCCH------HHHHHH
Confidence 3688999988 898777776532 222222222111 11124688899999986 466555
Q ss_pred hc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccc
Q psy7539 80 SE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
++ ++|++||+||.... ...+...+++|+.++..+++++... ....++++++|..+....
T Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~------ 153 (257)
T PRK12744 80 FDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT------ 153 (257)
T ss_pred HHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC------
Confidence 43 68999999997321 1235568899999999999988752 112467766432221110
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
|. ...|+.||.+.|.+.+.+.. .|+++++++||.+.++...+.
T Consensus 154 ----~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~- 200 (257)
T PRK12744 154 ----PF----------------------------YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQ- 200 (257)
T ss_pred ----CC----------------------------cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccc-
Confidence 00 17899999999999988875 379999999998865432111
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..+... .... . .....+.....+.+.+|+|.++..++....- ..+.++++.++
T Consensus 201 ------~~~~~~--~~~~-~--~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~---~~g~~~~~~gg 253 (257)
T PRK12744 201 ------EGAEAV--AYHK-T--AAALSPFSKTGLTDIEDIVPFIRFLVTDGWW---ITGQTILINGG 253 (257)
T ss_pred ------cccchh--hccc-c--cccccccccCCCCCHHHHHHHHHHhhcccce---eecceEeecCC
Confidence 011100 0000 0 0001111223588999999999999884211 13678888876
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.3e-10 Score=101.91 Aligned_cols=178 Identities=13% Similarity=0.028 Sum_probs=118.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.. ++.+. .....+++++.+|++++ +++..++
T Consensus 19 ~~la~~l~~~--G~~v~~~~r~~~------~~~~~---------------~~~~~~~~~~~~D~~~~------~~~~~~~ 69 (273)
T PRK07825 19 LATARALAAL--GARVAIGDLDEA------LAKET---------------AAELGLVVGGPLDVTDP------ASFAAFL 69 (273)
T ss_pred HHHHHHHHHC--CCEEEEEECCHH------HHHHH---------------HHHhccceEEEccCCCH------HHHHHHH
Confidence 3678899988 999999988532 22211 01112578899999986 4554433
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
.++|++||+||.... .......+++|+.|+..+.+++... .+..+||++||..+....
T Consensus 70 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 144 (273)
T PRK07825 70 DAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV----- 144 (273)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC-----
Confidence 367999999997422 1234568899999988877766431 255689999997654321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
+. ...|+.||...+.+...... .|+++++++|+.+-....
T Consensus 145 ----~~-----------------------------~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~--- 188 (273)
T PRK07825 145 ----PG-----------------------------MATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELI--- 188 (273)
T ss_pred ----CC-----------------------------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhh---
Confidence 00 17899999988877655543 589999999997633110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
.+. .......+++.+|+|+.++.++.++.
T Consensus 189 ------------------~~~------~~~~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 189 ------------------AGT------GGAKGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred ------------------ccc------ccccCCCCCCHHHHHHHHHHHHhCCC
Confidence 000 01123357899999999999998754
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=9e-11 Score=101.88 Aligned_cols=201 Identities=11% Similarity=0.050 Sum_probs=130.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+.. ..+...+ ....++.++.+|++++ +++..+++
T Consensus 30 ~la~~l~~~--G~~Vi~~~r~~~---~~~~~~~-----------------~~~~~~~~~~~Dl~~~------~~~~~~~~ 81 (255)
T PRK06841 30 AIAELFAAK--GARVALLDRSED---VAEVAAQ-----------------LLGGNAKGLVCDVSDS------QSVEAAVA 81 (255)
T ss_pred HHHHHHHHC--CCEEEEEeCCHH---HHHHHHH-----------------hhCCceEEEEecCCCH------HHHHHHHH
Confidence 678889888 899999998532 1111111 1123567899999876 45555543
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||.......
T Consensus 82 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------ 155 (255)
T PRK06841 82 AVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL------ 155 (255)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC------
Confidence 57999999997532 1234568899999999999987642 245789999997543210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
+ ....|+.+|.+.+.+.+..+. .|+.+..++||.+......
T Consensus 156 ----~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~--- 200 (255)
T PRK06841 156 ----E----------------------------RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGK--- 200 (255)
T ss_pred ----C----------------------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccc---
Confidence 0 017899999999988877765 4799999999987553211
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... .......... .....+.+.+|+|++++.++...... ..+..+.+.++
T Consensus 201 ----~~~~-~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~~~~~--~~G~~i~~dgg 251 (255)
T PRK06841 201 ----KAWA-GEKGERAKKL---------IPAGRFAYPEEIAAAALFLASDAAAM--ITGENLVIDGG 251 (255)
T ss_pred ----cccc-hhHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCccccC--ccCCEEEECCC
Confidence 0000 0111111111 11235789999999999998764331 23677777665
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3e-10 Score=98.88 Aligned_cols=208 Identities=11% Similarity=0.061 Sum_probs=128.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... ...++.++.+|++++ +.+..++
T Consensus 23 ~~ia~~l~~~--G~~v~~~~r~~~~~--------------------------~~~~~~~~~~D~~~~------~~~~~~~ 68 (260)
T PRK06523 23 AATVARLLEA--GARVVTTARSRPDD--------------------------LPEGVEFVAADLTTA------EGCAAVA 68 (260)
T ss_pred HHHHHHHHHC--CCEEEEEeCChhhh--------------------------cCCceeEEecCCCCH------HHHHHHH
Confidence 3678899888 99999999963211 123678899999986 4444333
Q ss_pred -------cCccEEEEcccccC---------cchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccc
Q psy7539 81 -------ETIHIVYHIAATVR---------FDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~ 141 (318)
.++|+|||+||... ....+...+++|+.|+.++++++... .+..++|++||..+....
T Consensus 69 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--- 145 (260)
T PRK06523 69 RAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL--- 145 (260)
T ss_pred HHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC---
Confidence 36899999999532 12345568899999998876655321 244689999997653210
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
+.+ ...|+.+|.+.+.+++.+.. .|+++.+++||.+.++...
T Consensus 146 -----~~~-----------------------------~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~ 191 (260)
T PRK06523 146 -----PES-----------------------------TTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAV 191 (260)
T ss_pred -----CCC-----------------------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHH
Confidence 001 17899999999998887764 5899999999988664311
Q ss_pred CC-CCcccCC-CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PL-PGWTDNI-NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ..+.... ..+......+.... ... ...-+...+|+++++..++...... ..+..+.+.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----p~~~~~~~~~va~~~~~l~s~~~~~--~~G~~~~vdgg 255 (260)
T PRK06523 192 ALAERLAEAAGTDYEGAKQIIMDSL-GGI-----PLGRPAEPEEVAELIAFLASDRAAS--ITGTEYVIDGG 255 (260)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHh-ccC-----ccCCCCCHHHHHHHHHHHhCccccc--ccCceEEecCC
Confidence 00 0000000 00001111111100 000 0123557899999999988754321 24778888877
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.4e-11 Score=102.82 Aligned_cols=187 Identities=14% Similarity=0.078 Sum_probs=119.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. +++.. . ..+++++.+|+++. +++..++
T Consensus 16 ~~la~~l~~~--g~~v~~~~r~~~------~~~~~---------------~--~~~~~~~~~D~~~~------~~~~~~~ 64 (256)
T PRK08017 16 LEAALELKRR--GYRVLAACRKPD------DVARM---------------N--SLGFTGILLDLDDP------ESVERAA 64 (256)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HhHHH---------------H--hCCCeEEEeecCCH------HHHHHHH
Confidence 3688999888 899999998532 12111 0 12467889999875 3333322
Q ss_pred --------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHH----HHHHHhcCCCccEEEEeccccccCCccc
Q psy7539 81 --------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDM----LNLSKQMIHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 --------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~l----l~~a~~~~~~~~~v~~SS~~~~~~~~~~ 141 (318)
..+|.|+|+||.... ...+...+++|+.|+.++ ++.+.+. +.+++|++||.++....
T Consensus 65 ~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~--- 140 (256)
T PRK08017 65 DEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMTSSVMGLIST--- 140 (256)
T ss_pred HHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEEcCcccccCC---
Confidence 357899999996421 123456889999998775 5666653 66789999997553221
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhh---h-cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYM---E-AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~-~~~~~~ilR~~~v~G~~~~ 217 (318)
. ....|+.+|...|.+...+. . .+++++++|||.+......
T Consensus 141 ------~-----------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~ 185 (256)
T PRK08017 141 ------P-----------------------------GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTD 185 (256)
T ss_pred ------C-----------------------------CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhh
Confidence 0 01789999999998876542 2 6899999999866432110
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
.... . ... ......+...+.+++++|+++++..++.++..
T Consensus 186 -------~~~~-------~-~~~-~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 186 -------NVNQ-------T-QSD-KPVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred -------cccc-------h-hhc-cchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 0000 0 000 01111223345689999999999999987653
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2e-10 Score=99.00 Aligned_cols=207 Identities=13% Similarity=0.052 Sum_probs=126.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.+... ....+...+. .....++.++.+|++++ +++..++
T Consensus 15 ~~l~~~l~~~--g~~v~~~~~~~~-~~~~~~~~~~---------------~~~~~~~~~~~~D~~d~------~~i~~~~ 70 (247)
T PRK09730 15 RATALLLAQE--GYTVAVNYQQNL-HAAQEVVNLI---------------TQAGGKAFVLQADISDE------NQVVAMF 70 (247)
T ss_pred HHHHHHHHHC--CCEEEEEeCCCh-HHHHHHHHHH---------------HhCCCeEEEEEccCCCH------HHHHHHH
Confidence 3688999988 898877543221 1111111111 11124678899999987 4566554
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc------CCCccEEEEeccccccCCc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM------IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~------~~~~~~v~~SS~~~~~~~~ 139 (318)
+ ++|+|||+||.... ....+..+++|+.++..+++++... .+..+||++||.......
T Consensus 71 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~- 149 (247)
T PRK09730 71 TAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA- 149 (247)
T ss_pred HHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC-
Confidence 4 46899999997421 1234568899999998888766542 012469999997553210
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
|. ....|+.+|...|.++..+.. .+++++++||+.++++.
T Consensus 150 ---------~~---------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~ 193 (247)
T PRK09730 150 ---------PG---------------------------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEM 193 (247)
T ss_pred ---------CC---------------------------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcc
Confidence 00 015699999999988876643 58999999999999864
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .+............ +. .-..+.+|++++++.++...... ..+.+|++.++
T Consensus 194 ~~~--------~~~~~~~~~~~~~~----~~-----~~~~~~~dva~~~~~~~~~~~~~--~~g~~~~~~g~ 246 (247)
T PRK09730 194 HAS--------GGEPGRVDRVKSNI----PM-----QRGGQPEEVAQAIVWLLSDKASY--VTGSFIDLAGG 246 (247)
T ss_pred ccc--------CCCHHHHHHHHhcC----CC-----CCCcCHHHHHHHHHhhcChhhcC--ccCcEEecCCC
Confidence 221 01111222222111 00 11237899999999988754321 13667777654
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.2e-11 Score=105.93 Aligned_cols=159 Identities=13% Similarity=0.079 Sum_probs=102.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++.+.. .. ..+++++.+|+++. +++..++
T Consensus 40 ~~~a~~L~~~--G~~Vv~~~R~~~------~~~~~~--------------~~-l~~v~~~~~Dl~d~------~~v~~~~ 90 (315)
T PRK06196 40 LETTRALAQA--GAHVIVPARRPD------VAREAL--------------AG-IDGVEVVMLDLADL------ESVRAFA 90 (315)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------HH-hhhCeEEEccCCCH------HHHHHHH
Confidence 3688999988 999999999532 121111 00 12478899999986 4555544
Q ss_pred -------cCccEEEEcccccCc-----chhHHHHHHHhHHHHHHHHH----HHHhcCCCccEEEEeccccccCCcccccc
Q psy7539 81 -------ETIHIVYHIAATVRF-----DDYMQTYVFLNTRGTRDMLN----LSKQMIHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~----~a~~~~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
.++|+|||+||.... ...++..+++|+.|+..+.+ ++.+. +..++|++||..........++.
T Consensus 91 ~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~~~~ 169 (315)
T PRK06196 91 ERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGHRRSPIRWDDP 169 (315)
T ss_pred HHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHhccCCCCcccc
Confidence 368999999997421 12345678999999665555 44442 44689999997543221111110
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
....+..+ ...|+.||.+.+.+...+.+ .|++++++|||.+.++.
T Consensus 170 ~~~~~~~~--------------------------~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 170 HFTRGYDK--------------------------WLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred CccCCCCh--------------------------HHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 00011100 16899999999988876644 58999999999997753
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.4e-10 Score=98.42 Aligned_cols=201 Identities=11% Similarity=0.069 Sum_probs=126.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |+.|++..|+.. ++.+.. .....+++++.+|+++. +++..++
T Consensus 20 ~~la~~l~~~--g~~v~~~~~~~~------~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 71 (245)
T PRK12936 20 EEIARLLHAQ--GAIVGLHGTRVE------KLEALA--------------AELGERVKIFPANLSDR------DEVKALG 71 (245)
T ss_pred HHHHHHHHHC--CCEEEEEcCCHH------HHHHHH--------------HHhCCceEEEEccCCCH------HHHHHHH
Confidence 3688899988 888887777421 122111 11124688899999876 4555543
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
.++|+|||+||.... ...+...+++|+.++.++++++.+. .+..+||++||..+....
T Consensus 72 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----- 146 (245)
T PRK12936 72 QKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN----- 146 (245)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC-----
Confidence 368999999997421 2345678999999999988876531 245689999996543221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.+|.+.+.++....+ .++++++++|+.+......
T Consensus 147 -----~----------------------------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~-- 191 (245)
T PRK12936 147 -----P----------------------------GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTG-- 191 (245)
T ss_pred -----C----------------------------CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhc--
Confidence 0 016899999988887766544 5799999999976432110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ........+. .....+...+|+++++..++..... ...+++|++.++
T Consensus 192 -----~~~---~~~~~~~~~~--------~~~~~~~~~~~ia~~~~~l~~~~~~--~~~G~~~~~~~g 241 (245)
T PRK12936 192 -----KLN---DKQKEAIMGA--------IPMKRMGTGAEVASAVAYLASSEAA--YVTGQTIHVNGG 241 (245)
T ss_pred -----ccC---hHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHcCcccc--CcCCCEEEECCC
Confidence 100 0011111110 1122366799999999887754322 124788998876
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.3e-09 Score=91.07 Aligned_cols=189 Identities=13% Similarity=0.067 Sum_probs=127.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhc-cceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIF-EKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++|.+. |++|++..|+ .+||+++-. +.. .++.++..|++++ ++...+.
T Consensus 21 A~A~~l~~~--G~~vvl~aRR------~drL~~la~--------------~~~~~~~~~~~~DVtD~------~~~~~~i 72 (246)
T COG4221 21 ATARALAEA--GAKVVLAARR------EERLEALAD--------------EIGAGAALALALDVTDR------AAVEAAI 72 (246)
T ss_pred HHHHHHHHC--CCeEEEEecc------HHHHHHHHH--------------hhccCceEEEeeccCCH------HHHHHHH
Confidence 467888888 9999999996 344554421 112 4688899999987 3433322
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
.++|++||.||.... .+.++..+++|+.|..+...+.... .+.-.+|++||.++...
T Consensus 73 ~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~------ 146 (246)
T COG4221 73 EALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYP------ 146 (246)
T ss_pred HHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccccc------
Confidence 379999999998532 2456679999999998888876532 13348999999775322
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.| +-+.|+.||+...++.....+ ++++++.+-||.|-....+-+
T Consensus 147 ----y~----------------------------~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v 194 (246)
T COG4221 147 ----YP----------------------------GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTV 194 (246)
T ss_pred ----CC----------------------------CCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccc
Confidence 11 018999999999988877665 578999999997744321111
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
...+......... .....+..+|+|+++..++..+..
T Consensus 195 -----~~~g~~~~~~~~y------------~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 195 -----RFEGDDERADKVY------------KGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred -----cCCchhhhHHHHh------------ccCCCCCHHHHHHHHHHHHhCCCc
Confidence 0111111111111 233678899999999999998775
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.5e-10 Score=100.23 Aligned_cols=200 Identities=14% Similarity=0.085 Sum_probs=127.5
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+.+. . +.+.+.. .....++.++.+|++++ +.+.++++
T Consensus 20 ~~a~~l~~~--G~~vi~~~r~~~~--~-~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~~ 74 (253)
T PRK08217 20 AMAEYLAQK--GAKLALIDLNQEK--L-EEAVAEC--------------GALGTEVRGYAANVTDE------EDVEATFA 74 (253)
T ss_pred HHHHHHHHC--CCEEEEEeCCHHH--H-HHHHHHH--------------HhcCCceEEEEcCCCCH------HHHHHHHH
Confidence 578888887 8899999885321 1 1111110 11234788899999876 34444333
Q ss_pred -------CccEEEEcccccCc----------------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEecccc
Q psy7539 82 -------TIHIVYHIAATVRF----------------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYC 134 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~----------------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~ 134 (318)
.+|+|||+||.... ...+...+++|+.|+..+...+... ..-..+|++||...
T Consensus 75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~ 154 (253)
T PRK08217 75 QIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR 154 (253)
T ss_pred HHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc
Confidence 47999999995321 1234457889999998777654421 12246899998755
Q ss_pred ccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccc
Q psy7539 135 HPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSI 210 (318)
Q Consensus 135 ~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~ 210 (318)
++.. + ...|+.+|.+.|.+++.+.. ++++++.++|+.
T Consensus 155 ~~~~----------~-----------------------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~ 195 (253)
T PRK08217 155 AGNM----------G-----------------------------QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGV 195 (253)
T ss_pred cCCC----------C-----------------------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCC
Confidence 4321 1 17899999999999887764 589999999998
Q ss_pred cccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 211 IIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 211 v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+.+.... ... + .....+... .....+.+++|+|+++..++..... .++.|++.++
T Consensus 196 v~t~~~~-------~~~-~-~~~~~~~~~---------~~~~~~~~~~~~a~~~~~l~~~~~~----~g~~~~~~gg 250 (253)
T PRK08217 196 IETEMTA-------AMK-P-EALERLEKM---------IPVGRLGEPEEIAHTVRFIIENDYV----TGRVLEIDGG 250 (253)
T ss_pred CcCcccc-------ccC-H-HHHHHHHhc---------CCcCCCcCHHHHHHHHHHHHcCCCc----CCcEEEeCCC
Confidence 8664321 111 1 111111111 1123467899999999999865432 4789999877
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.3e-10 Score=97.15 Aligned_cols=205 Identities=10% Similarity=0.042 Sum_probs=131.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. ..+.+...+ .....++.++.+|+++. +++..++
T Consensus 25 ~~la~~l~~~--G~~vv~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~D~~~~------~~i~~~~ 79 (255)
T PRK06113 25 KEIAITFATA--GASVVVSDINAD---AANHVVDEI--------------QQLGGQAFACRCDITSE------QELSALA 79 (255)
T ss_pred HHHHHHHHHC--CCeEEEEeCCHH---HHHHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHH
Confidence 3688999988 999999888532 222222111 11123678899999986 4554433
Q ss_pred c-------CccEEEEcccccCc---c---hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF---D---DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~---~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|+|||+||.... . ..+...+++|+.++.++++++... .+..++|++||..+....
T Consensus 80 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------ 153 (255)
T PRK06113 80 DFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN------ 153 (255)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCC------
Confidence 2 57999999997432 1 334557899999999999998631 134589999997653210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+ ...|+.+|.+.+.+++.... .++.+.++.||.+-.+...
T Consensus 154 ---~~-----------------------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~--- 198 (255)
T PRK06113 154 ---IN-----------------------------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK--- 198 (255)
T ss_pred ---CC-----------------------------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccc---
Confidence 01 17899999999999988764 5789999999977432110
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....+ .+....... .....+...+|++.+++.++...... ..++++++.++
T Consensus 199 ----~~~~~-~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~~~--~~G~~i~~~gg 249 (255)
T PRK06113 199 ----SVITP-EIEQKMLQH---------TPIRRLGQPQDIANAALFLCSPAASW--VSGQILTVSGG 249 (255)
T ss_pred ----cccCH-HHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCccccC--ccCCEEEECCC
Confidence 11111 111111111 11123678899999999998654321 24788888877
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.5e-10 Score=96.80 Aligned_cols=203 Identities=16% Similarity=0.120 Sum_probs=129.2
Q ss_pred hhHHHHHhhCCCcEEEEE-EccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENVKIYIL-LRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+|++.|+++ |++|+++ .|+... .+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 20 ~la~~l~~~--g~~v~~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 74 (247)
T PRK05565 20 AIAELLAKE--GAKVVIAYDINEEA---AQELLEEI--------------KEEGGDAIAVKADVSSE------EDVENLV 74 (247)
T ss_pred HHHHHHHHC--CCEEEEEcCCCHHH---HHHHHHHH--------------HhcCCeEEEEECCCCCH------HHHHHHH
Confidence 678888887 8998888 775321 11111111 11234688999999987 4565554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...++..+++|+.++.++++++... .+..+||++||........
T Consensus 75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---- 150 (247)
T PRK05565 75 EQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS---- 150 (247)
T ss_pred HHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC----
Confidence 4 78999999997521 1334568899999988888877642 2456799999965543210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
. ...|+.+|.+.+.++..... .|++++++|||.+......
T Consensus 151 -----~-----------------------------~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~-- 194 (247)
T PRK05565 151 -----C-----------------------------EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWS-- 194 (247)
T ss_pred -----C-----------------------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccc--
Confidence 0 16899999988888777654 5899999999987543211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... +. ....... ......+...+|++++++.++...... ..+..+++.++
T Consensus 195 -----~~~-~~-~~~~~~~---------~~~~~~~~~~~~va~~~~~l~~~~~~~--~~g~~~~~~~~ 244 (247)
T PRK05565 195 -----SFS-EE-DKEGLAE---------EIPLGRLGKPEEIAKVVLFLASDDASY--ITGQIITVDGG 244 (247)
T ss_pred -----ccC-hH-HHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCCccCC--ccCcEEEecCC
Confidence 111 11 1111111 011234678899999999988764431 24677777765
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.9e-10 Score=98.15 Aligned_cols=204 Identities=12% Similarity=0.130 Sum_probs=129.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+.+ .+.+.+.+ .....++.++.+|+++. +++..+++
T Consensus 30 ~ia~~l~~~--G~~v~~~~~~~~----~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~i~~~~~ 83 (258)
T PRK06935 30 GYAVALAKA--GADIIITTHGTN----WDETRRLI--------------EKEGRKVTFVQVDLTKP------ESAEKVVK 83 (258)
T ss_pred HHHHHHHHC--CCEEEEEeCCcH----HHHHHHHH--------------HhcCCceEEEEcCCCCH------HHHHHHHH
Confidence 678899988 999999998621 22222221 11234688999999986 45655554
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
++|++||+||.... ...++..+++|+.++..+.+++... .+..++|++||..++....
T Consensus 84 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 158 (258)
T PRK06935 84 EALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK----- 158 (258)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC-----
Confidence 68999999997421 2345567889999987777666431 2456899999976543210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
....|+.+|.+.+.+++.+++ +|+++.+++||.+..+......
T Consensus 159 ---------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~ 205 (258)
T PRK06935 159 ---------------------------------FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIR 205 (258)
T ss_pred ---------------------------------CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcc
Confidence 016899999999999988765 5899999999987543211100
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ......... . ...-+...+|++..+..++...... ..+.++.+.++
T Consensus 206 ------~~~-~~~~~~~~~----~-----~~~~~~~~~dva~~~~~l~s~~~~~--~~G~~i~~dgg 254 (258)
T PRK06935 206 ------ADK-NRNDEILKR----I-----PAGRWGEPDDLMGAAVFLASRASDY--VNGHILAVDGG 254 (258)
T ss_pred ------cCh-HHHHHHHhc----C-----CCCCCCCHHHHHHHHHHHcChhhcC--CCCCEEEECCC
Confidence 000 011111110 0 1124677799999998888654321 23677777665
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.4e-10 Score=98.37 Aligned_cols=211 Identities=14% Similarity=0.048 Sum_probs=128.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. .. +.+.+.+ .....++.++.+|++++ +++..++
T Consensus 24 ~~ia~~l~~~--G~~V~~~~r~~~--~~-~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~v~~~~ 78 (278)
T PRK08277 24 GAMAKELARA--GAKVAILDRNQE--KA-EAVVAEI--------------KAAGGEALAVKADVLDK------ESLEQAR 78 (278)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH--HH-HHHHHHH--------------HhcCCeEEEEECCCCCH------HHHHHHH
Confidence 3688899988 999999998532 11 1111111 11124688999999986 4555443
Q ss_pred c-------CccEEEEcccccCc----------------------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEE
Q psy7539 81 E-------TIHIVYHIAATVRF----------------------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVY 128 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~----------------------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~ 128 (318)
+ ++|+|||+||.... ...+...+++|+.++..+++++... .+..+||+
T Consensus 79 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~ 158 (278)
T PRK08277 79 QQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIIN 158 (278)
T ss_pred HHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 3 68999999995321 1235568889999988766554321 23468999
Q ss_pred EeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEE
Q psy7539 129 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 204 (318)
Q Consensus 129 ~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ 204 (318)
+||..++... .+ ...|+.||.+.+.+++.++. +|+++.
T Consensus 159 isS~~~~~~~---------~~-----------------------------~~~Y~~sK~a~~~l~~~la~e~~~~girvn 200 (278)
T PRK08277 159 ISSMNAFTPL---------TK-----------------------------VPAYSAAKAAISNFTQWLAVHFAKVGIRVN 200 (278)
T ss_pred EccchhcCCC---------CC-----------------------------CchhHHHHHHHHHHHHHHHHHhCccCeEEE
Confidence 9997764321 00 17899999999999887765 479999
Q ss_pred EecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhh-ccCCCCCCCcEEE
Q psy7539 205 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN-FLSNPGNTMRVIN 283 (318)
Q Consensus 205 ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~-~~~~~~~~~~~~n 283 (318)
+++||.+..+.........+..+ .......... ....-+...+|+|++++.++.. .... ..+..+.
T Consensus 201 ~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~---------~p~~r~~~~~dva~~~~~l~s~~~~~~--~tG~~i~ 267 (278)
T PRK08277 201 AIAPGFFLTEQNRALLFNEDGSL--TERANKILAH---------TPMGRFGKPEELLGTLLWLADEKASSF--VTGVVLP 267 (278)
T ss_pred EEEeccCcCcchhhhhccccccc--hhHHHHHhcc---------CCccCCCCHHHHHHHHHHHcCccccCC--cCCCEEE
Confidence 99999887643211100000000 0111111111 1112366789999999998765 3321 1366777
Q ss_pred eeCC
Q psy7539 284 LTAN 287 (318)
Q Consensus 284 i~~~ 287 (318)
+.++
T Consensus 268 vdgG 271 (278)
T PRK08277 268 VDGG 271 (278)
T ss_pred ECCC
Confidence 7655
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.1e-09 Score=95.01 Aligned_cols=214 Identities=13% Similarity=0.073 Sum_probs=127.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|+.+. .+++...+ .....++.++.+|++++ +.+..++
T Consensus 16 ~~la~~l~~~--G~~v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 70 (256)
T PRK08643 16 FAIAKRLVED--GFKVAIVDYNEET---AQAAADKL--------------SKDGGKAIAVKADVSDR------DQVFAAV 70 (256)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCeEEEEECCCCCH------HHHHHHH
Confidence 3688899988 8999999986321 12222111 11124678899999987 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ....+..+++|+.++..+++++... +...++|++||..+....
T Consensus 71 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 146 (256)
T PRK08643 71 RQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN---- 146 (256)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC----
Confidence 3 68999999986421 1234568889999988877766532 123579999996543210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
|. ...|+.+|.+.+.+.+.++. .|++++.++||.+.++....
T Consensus 147 ------~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~ 192 (256)
T PRK08643 147 ------PE----------------------------LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFD 192 (256)
T ss_pred ------CC----------------------------CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhH
Confidence 00 17899999999988877664 58999999999885532110
Q ss_pred CCC-cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPG-WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .......+..+........ . ....+...+|+|.++..++...... ..+.++.+.++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~va~~~~~L~~~~~~~--~~G~~i~vdgg 252 (256)
T PRK08643 193 IAHQVGENAGKPDEWGMEQFAKD---I-----TLGRLSEPEDVANCVSFLAGPDSDY--ITGQTIIVDGG 252 (256)
T ss_pred HHhhhccccCCCchHHHHHHhcc---C-----CCCCCcCHHHHHHHHHHHhCccccC--ccCcEEEeCCC
Confidence 000 0000000000100001000 0 1123567899999999888654321 13667777655
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.7e-10 Score=103.81 Aligned_cols=181 Identities=13% Similarity=0.066 Sum_probs=104.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+... ..+...++ .....++.++.+|+++. +++..+++
T Consensus 21 ~~a~~L~~~--G~~V~~~~r~~~~--~~~~~~~l---------------~~~~~~~~~~~~Dl~~~------~~v~~~~~ 75 (322)
T PRK07453 21 YAAKALAKR--GWHVIMACRNLKK--AEAAAQEL---------------GIPPDSYTIIHIDLGDL------DSVRRFVD 75 (322)
T ss_pred HHHHHHHHC--CCEEEEEECCHHH--HHHHHHHh---------------hccCCceEEEEecCCCH------HHHHHHHH
Confidence 688999988 8999999985321 11111111 11124688999999986 45555543
Q ss_pred -------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CC--CccEEEEeccccccCC--c
Q psy7539 82 -------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IH--LQLFVYVSTAYCHPKE--K 139 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~--~~~~v~~SS~~~~~~~--~ 139 (318)
.+|+|||+||.... ...+...+++|+.|+.++++++... .+ ..++|++||...+... .
T Consensus 76 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~ 155 (322)
T PRK07453 76 DFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGG 155 (322)
T ss_pred HHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCC
Confidence 48999999996421 1234568899999999988877642 11 2599999997654311 0
Q ss_pred --ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecccccc
Q psy7539 140 --VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIII 212 (318)
Q Consensus 140 --~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~ 212 (318)
+..+ +.+..+......... .+.. ........+...|+.||++.+.+...+.+ .|+.++++|||+|+
T Consensus 156 ~~~~~~-----~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~ 228 (322)
T PRK07453 156 KIPIPA-----PADLGDLSGFEAGFK-APIS-MADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVA 228 (322)
T ss_pred ccCCCC-----ccchhhhhcchhccc-cccc-ccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCccc
Confidence 0110 000000000000000 0000 00000001227899999988877766654 37999999999997
Q ss_pred cc
Q psy7539 213 PI 214 (318)
Q Consensus 213 G~ 214 (318)
+.
T Consensus 229 ~t 230 (322)
T PRK07453 229 DT 230 (322)
T ss_pred CC
Confidence 63
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.3e-10 Score=95.38 Aligned_cols=183 Identities=10% Similarity=-0.047 Sum_probs=120.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |.+|+++.|+... .+.+...+ .. .....+++++.+|++++ +++..++
T Consensus 16 ~~la~~l~~~--g~~v~~~~r~~~~---~~~~~~~~--------~~----~~~~~~~~~~~~D~~~~------~~~~~~~ 72 (248)
T PRK08251 16 AGMAREFAAK--GRDLALCARRTDR---LEELKAEL--------LA----RYPGIKVAVAALDVNDH------DQVFEVF 72 (248)
T ss_pred HHHHHHHHHc--CCEEEEEeCCHHH---HHHHHHHH--------Hh----hCCCceEEEEEcCCCCH------HHHHHHH
Confidence 3688999988 8899999996321 11111110 00 11124788999999986 4555443
Q ss_pred c-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||..... ......+++|+.++.++++++... .+..+||++||..+....
T Consensus 73 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----- 147 (248)
T PRK08251 73 AEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL----- 147 (248)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC-----
Confidence 3 689999999974221 234467889999999888876421 256789999996553210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
+.+. ..|+.||.+.+.+...+.. .++++++++||.+.+....
T Consensus 148 ---~~~~-----------------------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~-- 193 (248)
T PRK08251 148 ---PGVK-----------------------------AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA-- 193 (248)
T ss_pred ---CCCc-----------------------------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh--
Confidence 0111 7899999999988877664 4789999999977442110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
+. . ....+++.+|+|++++.++++..
T Consensus 194 -------------------~~-----~---~~~~~~~~~~~a~~i~~~~~~~~ 219 (248)
T PRK08251 194 -------------------KA-----K---STPFMVDTETGVKALVKAIEKEP 219 (248)
T ss_pred -------------------cc-----c---cCCccCCHHHHHHHHHHHHhcCC
Confidence 00 0 01235788999999999997643
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-09 Score=94.89 Aligned_cols=203 Identities=11% Similarity=0.113 Sum_probs=128.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|++..|+... ..+.+. .....++.++.+|++++ +++..++
T Consensus 19 ~~la~~l~~~--G~~vv~~~~~~~~--~~~~~~-----------------~~~~~~~~~~~~D~~~~------~~~~~~~ 71 (253)
T PRK08642 19 AAIARAFARE--GARVVVNYHQSED--AAEALA-----------------DELGDRAIALQADVTDR------EQVQAMF 71 (253)
T ss_pred HHHHHHHHHC--CCeEEEEcCCCHH--HHHHHH-----------------HHhCCceEEEEcCCCCH------HHHHHHH
Confidence 3688899888 8988877664221 111111 11124788999999886 4555554
Q ss_pred c-------C-ccEEEEcccccC---------c----chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEecccccc
Q psy7539 81 E-------T-IHIVYHIAATVR---------F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHP 136 (318)
Q Consensus 81 ~-------~-~d~Vih~Aa~~~---------~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~ 136 (318)
+ . +|+|||+||... . ...+...+++|+.++.++++++... .+..++|++||.....
T Consensus 72 ~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~ 151 (253)
T PRK08642 72 ATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN 151 (253)
T ss_pred HHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC
Confidence 3 2 899999998521 0 1234567999999999999988631 2446899999854321
Q ss_pred CCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc
Q psy7539 137 KEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII 212 (318)
Q Consensus 137 ~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~ 212 (318)
. ..|. +.|+.||.+.|.+++.+++ .|+.+..++||.+.
T Consensus 152 ~---------~~~~-----------------------------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~ 193 (253)
T PRK08642 152 P---------VVPY-----------------------------HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLR 193 (253)
T ss_pred C---------CCCc-----------------------------cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccC
Confidence 1 0111 7899999999999998765 47899999999774
Q ss_pred cccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 213 PIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 213 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..... .. .+......+.. .. ....+.+.+|+++++..++...... ..+..+.+.++
T Consensus 194 t~~~~-------~~-~~~~~~~~~~~-~~--------~~~~~~~~~~va~~~~~l~~~~~~~--~~G~~~~vdgg 249 (253)
T PRK08642 194 TTDAS-------AA-TPDEVFDLIAA-TT--------PLRKVTTPQEFADAVLFFASPWARA--VTGQNLVVDGG 249 (253)
T ss_pred Cchhh-------cc-CCHHHHHHHHh-cC--------CcCCCCCHHHHHHHHHHHcCchhcC--ccCCEEEeCCC
Confidence 42110 00 11111111111 11 1134889999999999998754321 24777777765
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.1e-10 Score=97.31 Aligned_cols=205 Identities=10% Similarity=0.018 Sum_probs=129.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ...+++.+.+ .....+++++.+|++++ +++..++
T Consensus 16 ~~~a~~l~~~--G~~V~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 71 (256)
T PRK12743 16 KACALLLAQQ--GFDIGITWHSDE--EGAKETAEEV--------------RSHGVRAEIRQLDLSDL------PEGAQAL 71 (256)
T ss_pred HHHHHHHHHC--CCEEEEEeCCCh--HHHHHHHHHH--------------HhcCCceEEEEccCCCH------HHHHHHH
Confidence 3688999998 999988876432 1122222111 11234788999999987 4554444
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... ...+...+++|+.++..+++++... ++-.+||++||......
T Consensus 72 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~----- 146 (256)
T PRK12743 72 DKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTP----- 146 (256)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCC-----
Confidence 3 58999999997432 1334568999999999999887652 11258999999654221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
..+ ...|+.+|.+.+.+++..+. ++++++.++||.+.++....
T Consensus 147 ----~~~-----------------------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~ 193 (256)
T PRK12743 147 ----LPG-----------------------------ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGM 193 (256)
T ss_pred ----CCC-----------------------------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccc
Confidence 011 17899999999999877654 57999999999887642110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ........+ .+ ...+.+.+|++.++..++...... ..+.++.+.++
T Consensus 194 --------~~~-~~~~~~~~~----~~-----~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~~dgg 242 (256)
T PRK12743 194 --------DDS-DVKPDSRPG----IP-----LGRPGDTHEIASLVAWLCSEGASY--TTGQSLIVDGG 242 (256)
T ss_pred --------cCh-HHHHHHHhc----CC-----CCCCCCHHHHHHHHHHHhCccccC--cCCcEEEECCC
Confidence 001 111111111 00 112457899999998887654321 23667777655
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.3e-10 Score=96.03 Aligned_cols=205 Identities=13% Similarity=0.052 Sum_probs=126.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.+... ....+.+.+. .....++.++.+|+++. +++..++
T Consensus 17 ~~~a~~l~~~--G~~vv~~~~~~~-~~~~~~~~~~---------------~~~~~~~~~~~~D~~~~------~~~~~~~ 72 (246)
T PRK12938 17 TSICQRLHKD--GFKVVAGCGPNS-PRRVKWLEDQ---------------KALGFDFIASEGNVGDW------DSTKAAF 72 (246)
T ss_pred HHHHHHHHHc--CCEEEEEcCCCh-HHHHHHHHHH---------------HhcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999988 888887655321 1112222211 11223677889999876 4555444
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...+...+++|+.++..+.+++... .+..+||++||..+....
T Consensus 73 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----- 147 (246)
T PRK12938 73 DKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ----- 147 (246)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC-----
Confidence 3 68999999997431 2345678899999977766554321 255789999997543210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
. ....|+.+|.+.+.+...+.+ .++++.+++||.+.++...
T Consensus 148 ----~-----------------------------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~-- 192 (246)
T PRK12938 148 ----F-----------------------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK-- 192 (246)
T ss_pred ----C-----------------------------CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhh--
Confidence 0 017899999998888777654 5899999999987553211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .+ ..+..+... .....+...+|++.++..++...... ..+.++.+.++
T Consensus 193 -----~~-~~-~~~~~~~~~---------~~~~~~~~~~~v~~~~~~l~~~~~~~--~~g~~~~~~~g 242 (246)
T PRK12938 193 -----AI-RP-DVLEKIVAT---------IPVRRLGSPDEIGSIVAWLASEESGF--STGADFSLNGG 242 (246)
T ss_pred -----hc-Ch-HHHHHHHhc---------CCccCCcCHHHHHHHHHHHcCcccCC--ccCcEEEECCc
Confidence 01 11 111111111 11224567899999999887653321 24667777654
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-09 Score=94.61 Aligned_cols=208 Identities=11% Similarity=0.012 Sum_probs=129.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.+. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 22 ~~ia~~l~~~--G~~v~~~~r~~~~--~~~~~~~~l--------------~~~~~~~~~~~~D~~~~------~~i~~~~ 77 (254)
T PRK06114 22 QRIAIGLAQA--GADVALFDLRTDD--GLAETAEHI--------------EAAGRRAIQIAADVTSK------ADLRAAV 77 (254)
T ss_pred HHHHHHHHHC--CCEEEEEeCCcch--HHHHHHHHH--------------HhcCCceEEEEcCCCCH------HHHHHHH
Confidence 3688999988 9999999986431 112221111 11124678899999986 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||.... ...++..+++|+.++..+++++... .+..++|++||..+......
T Consensus 78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--- 154 (254)
T PRK06114 78 ARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG--- 154 (254)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---
Confidence 3 47999999997532 2345668899999998877765421 24468999999765422100
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.+|.+.+.+.+..+. +|+++.+++||.+.++....
T Consensus 155 ----~~-----------------------------~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~- 200 (254)
T PRK06114 155 ----LL-----------------------------QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR- 200 (254)
T ss_pred ----CC-----------------------------cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc-
Confidence 00 16899999999988887754 58999999999885532110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+ ........+... .+ ..-+...+|++.+++.++...... ..+.++.+.++
T Consensus 201 ~-------~~~~~~~~~~~~-------~p--~~r~~~~~dva~~~~~l~s~~~~~--~tG~~i~~dgg 250 (254)
T PRK06114 201 P-------EMVHQTKLFEEQ-------TP--MQRMAKVDEMVGPAVFLLSDAASF--CTGVDLLVDGG 250 (254)
T ss_pred c-------cchHHHHHHHhc-------CC--CCCCcCHHHHHHHHHHHcCccccC--cCCceEEECcC
Confidence 0 001111111111 01 113567899999999988654321 24667777655
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=8.4e-10 Score=95.93 Aligned_cols=203 Identities=13% Similarity=0.043 Sum_probs=126.6
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCC------CHHHH--HHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCH
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNK------NSRER--LEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISA 73 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~------~~~~r--l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~ 73 (318)
+++++|+++ |++|+++.|+..+. +..+. +... + .....+++++.+|+++.
T Consensus 22 ~la~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~--------~------~~~~~~~~~~~~D~~~~------ 79 (256)
T PRK12748 22 AVCRRLAAK--GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE--------I------ESYGVRCEHMEIDLSQP------ 79 (256)
T ss_pred HHHHHHHHc--CCcEEEEcCCccccccccccchhhHHHHHHH--------H------HhcCCeEEEEECCCCCH------
Confidence 578899988 89999999863211 01111 1111 0 11234688999999986
Q ss_pred HHHHHHhc-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEecccccc
Q psy7539 74 EDRQMLSE-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHP 136 (318)
Q Consensus 74 ~~~~~~~~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~ 136 (318)
+++..+++ .+|+|||+||..... ..++..+++|+.|+..+++++... ....+||++||..++.
T Consensus 80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~ 159 (256)
T PRK12748 80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG 159 (256)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence 45444332 579999999874221 234567899999999999988642 1335899999976543
Q ss_pred CCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc
Q psy7539 137 KEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII 212 (318)
Q Consensus 137 ~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~ 212 (318)
.. .. ...|+.+|.+.|.+++.... .+++++.++||.+.
T Consensus 160 ~~---------~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~ 201 (256)
T PRK12748 160 PM---------PD-----------------------------ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTD 201 (256)
T ss_pred CC---------CC-----------------------------chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCccc
Confidence 21 00 16899999999999887654 58999999999664
Q ss_pred cccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 213 PIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 213 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ... .. ...... ..+ ...+...+|++.++..++...... ..+.++++.++
T Consensus 202 t~~-----------~~~-~~-~~~~~~---~~~-----~~~~~~~~~~a~~~~~l~~~~~~~--~~g~~~~~d~g 253 (256)
T PRK12748 202 TGW-----------ITE-EL-KHHLVP---KFP-----QGRVGEPVDAARLIAFLVSEEAKW--ITGQVIHSEGG 253 (256)
T ss_pred CCC-----------CCh-hH-HHhhhc---cCC-----CCCCcCHHHHHHHHHHHhCccccc--ccCCEEEecCC
Confidence 321 110 11 111110 001 112445799999988877653321 13678888665
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.3e-09 Score=94.48 Aligned_cols=206 Identities=8% Similarity=-0.013 Sum_probs=130.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+... ..+...+. .....++.++.+|++++ +.+..++
T Consensus 23 ~~ia~~L~~~--G~~vvl~~r~~~~--~~~~~~~l---------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 77 (254)
T PRK08085 23 FLLATGLAEY--GAEIIINDITAER--AELAVAKL---------------RQEGIKAHAAPFNVTHK------QEVEAAI 77 (254)
T ss_pred HHHHHHHHHc--CCEEEEEcCCHHH--HHHHHHHH---------------HhcCCeEEEEecCCCCH------HHHHHHH
Confidence 3688999988 8999999885321 11111111 11124677889999987 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||.... ...++..+++|+.++..+++++... .+..+||++||.......
T Consensus 78 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----- 152 (254)
T PRK08085 78 EHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR----- 152 (254)
T ss_pred HHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC-----
Confidence 3 58999999996421 2345568999999998888877642 244689999996542210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.+|.+.+.+++.+.. +|+++.+++||.+..+...+
T Consensus 153 ----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~- 198 (254)
T PRK08085 153 ----DT-----------------------------ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKA- 198 (254)
T ss_pred ----CC-----------------------------CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhh-
Confidence 00 17899999999999988765 58999999999886643221
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
......+ ....... ....-+...+|++.++..++...... ..+.+..+.++
T Consensus 199 ------~~~~~~~-~~~~~~~--------~p~~~~~~~~~va~~~~~l~~~~~~~--i~G~~i~~dgg 249 (254)
T PRK08085 199 ------LVEDEAF-TAWLCKR--------TPAARWGDPQELIGAAVFLSSKASDF--VNGHLLFVDGG 249 (254)
T ss_pred ------hccCHHH-HHHHHhc--------CCCCCCcCHHHHHHHHHHHhCccccC--CcCCEEEECCC
Confidence 1111111 1111111 11234678899999998888753321 13556666554
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=7e-10 Score=95.63 Aligned_cols=180 Identities=12% Similarity=0.099 Sum_probs=120.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+.+. .+.+.+. ++ .....+++++.+|++++ +++..+++
T Consensus 16 ~~a~~l~~~--G~~Vi~~~r~~~~---~~~~~~~--------~~-----~~~~~~~~~~~~Dl~~~------~~~~~~~~ 71 (243)
T PRK07102 16 ACARRYAAA--GARLYLAARDVER---LERLADD--------LR-----ARGAVAVSTHELDILDT------ASHAAFLD 71 (243)
T ss_pred HHHHHHHhc--CCEEEEEeCCHHH---HHHHHHH--------HH-----HhcCCeEEEEecCCCCh------HHHHHHHH
Confidence 688999988 9999999996421 1111111 00 11134789999999986 45555544
Q ss_pred ----CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCC
Q psy7539 82 ----TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 82 ----~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
++|+|||+||..... ......+++|+.++.++++++... .+..+||++||.+.....
T Consensus 72 ~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 142 (243)
T PRK07102 72 SLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR--------- 142 (243)
T ss_pred HHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC---------
Confidence 579999999864221 223457889999999999887542 245789999997542210
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcc
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWT 223 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~ 223 (318)
|. ...|+.+|...+.+...... .|+++.+++|+.+.+....
T Consensus 143 -~~----------------------------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~------ 187 (243)
T PRK07102 143 -AS----------------------------NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA------ 187 (243)
T ss_pred -CC----------------------------CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh------
Confidence 00 16799999999998887643 5899999999977553110
Q ss_pred cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 224 DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
+. . . ....+...+++++.++.++.++
T Consensus 188 ---------------~~-~-~-----~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 188 ---------------GL-K-L-----PGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred ---------------cc-C-C-----CccccCCHHHHHHHHHHHHhCC
Confidence 00 0 0 0123567899999999988764
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.2e-09 Score=94.89 Aligned_cols=206 Identities=8% Similarity=-0.002 Sum_probs=130.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... . +.+.+.+ .....++.++.+|++++ +++..++
T Consensus 25 ~~la~~l~~~--G~~v~~~~r~~~~--~-~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 79 (256)
T PRK06124 25 FEIARALAGA--GAHVLVNGRNAAT--L-EAAVAAL--------------RAAGGAAEALAFDIADE------EAVAAAF 79 (256)
T ss_pred HHHHHHHHHc--CCeEEEEeCCHHH--H-HHHHHHH--------------HhcCCceEEEEccCCCH------HHHHHHH
Confidence 3678889887 9999999996321 1 1111110 11234688999999986 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||.... ...++..+++|+.++..+.+++.+. .+..+||++||..+....
T Consensus 80 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----- 154 (256)
T PRK06124 80 ARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR----- 154 (256)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC-----
Confidence 3 46999999997421 1234567899999999998766431 255789999997653211
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.+|.+.+.+++.+.. .++++..++|+.+.++....
T Consensus 155 -----~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~- 200 (256)
T PRK06124 155 -----A----------------------------GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAA- 200 (256)
T ss_pred -----C----------------------------CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhh-
Confidence 0 017899999999998877654 48999999999887643111
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...+..+...+... . ....+++.+|++.+++.++...... -.+..+.+.++
T Consensus 201 ------~~~~~~~~~~~~~~-~--------~~~~~~~~~~~a~~~~~l~~~~~~~--~~G~~i~~dgg 251 (256)
T PRK06124 201 ------MAADPAVGPWLAQR-T--------PLGRWGRPEEIAGAAVFLASPAASY--VNGHVLAVDGG 251 (256)
T ss_pred ------hccChHHHHHHHhc-C--------CCCCCCCHHHHHHHHHHHcCcccCC--cCCCEEEECCC
Confidence 11111111111111 0 1124789999999999998765321 12555555544
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.5e-10 Score=95.36 Aligned_cols=198 Identities=9% Similarity=0.024 Sum_probs=128.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... . ...+++++.+|++++ +++..++
T Consensus 20 ~~la~~l~~~--g~~v~~~~r~~~~~------------------------~-~~~~~~~~~~D~~~~------~~~~~~~ 66 (252)
T PRK07856 20 AGIARAFLAA--GATVVVCGRRAPET------------------------V-DGRPAEFHAADVRDP------DQVAALV 66 (252)
T ss_pred HHHHHHHHHC--CCEEEEEeCChhhh------------------------h-cCCceEEEEccCCCH------HHHHHHH
Confidence 3688899988 99999999964220 0 123678899999876 4566555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... ...++..+++|+.++..+++++... .+..+||++||.......
T Consensus 67 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~---- 142 (252)
T PRK07856 67 DAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS---- 142 (252)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC----
Confidence 4 46999999996421 1234568899999999999987641 133589999997653211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.+|.+.|.+++.+.. ..+.+..++||.+..+....
T Consensus 143 ------~----------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~- 187 (252)
T PRK07856 143 ------P----------------------------GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSEL- 187 (252)
T ss_pred ------C----------------------------CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhh-
Confidence 0 017899999999999988765 23788889999775432110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.++............ ...-+...+|++.+++.++...... ..+..+.+.++
T Consensus 188 ------~~~~~~~~~~~~~~~---------~~~~~~~p~~va~~~~~L~~~~~~~--i~G~~i~vdgg 238 (252)
T PRK07856 188 ------HYGDAEGIAAVAATV---------PLGRLATPADIAWACLFLASDLASY--VSGANLEVHGG 238 (252)
T ss_pred ------hccCHHHHHHHhhcC---------CCCCCcCHHHHHHHHHHHcCcccCC--ccCCEEEECCC
Confidence 011111111111110 1123567899999999888653321 24778888776
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.3e-09 Score=94.21 Aligned_cols=197 Identities=13% Similarity=0.139 Sum_probs=121.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. +..+.+.+.+. . ......+.++.+|++++ +.+..++
T Consensus 13 ~~~a~~l~~~--G~~v~~~~r~~~--~~~~~~~~~~~--------~----~~~~~~~~~~~~D~~~~------~~~~~~~ 70 (251)
T PRK07069 13 RAIARRMAEQ--GAKVFLTDINDA--AGLDAFAAEIN--------A----AHGEGVAFAAVQDVTDE------AQWQALL 70 (251)
T ss_pred HHHHHHHHHC--CCEEEEEeCCcc--hHHHHHHHHHH--------h----cCCCceEEEEEeecCCH------HHHHHHH
Confidence 3688999988 999999998632 11222221111 0 00112345678999876 4565544
Q ss_pred c-------CccEEEEcccccCcc-------hhHHHHHHHhHH----HHHHHHHHHHhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRFD-------DYMQTYVFLNTR----GTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~----gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||..... ......+++|+. ++..+++++++. +.++||++||..++....
T Consensus 71 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss~~~~~~~~--- 146 (251)
T PRK07069 71 AQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISSVAAFKAEP--- 146 (251)
T ss_pred HHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecChhhccCCC---
Confidence 3 679999999975321 234457788887 778888888874 678999999976643210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----c--CCcEEEecccccccccC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A--GMPCMILRPSIIIPIWK 216 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~--~~~~~ilR~~~v~G~~~ 216 (318)
. ...|+.+|.+.+.+.+.+.. + +++++.++|+.+.++..
T Consensus 147 ------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~ 191 (251)
T PRK07069 147 ------D-----------------------------YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIV 191 (251)
T ss_pred ------C-----------------------------CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcch
Confidence 0 16899999999988877643 2 47889999998866432
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
.+... . .........+.++ .....+.+++|++.+++.++...
T Consensus 192 ~~~~~---~-~~~~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~~ 233 (251)
T PRK07069 192 DPIFQ---R-LGEEEATRKLARG---------VPLGRLGEPDDVAHAVLYLASDE 233 (251)
T ss_pred hHHhh---h-ccchhHHHHHhcc---------CCCCCCcCHHHHHHHHHHHcCcc
Confidence 11000 0 0011111111111 11224568899999999877654
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.6e-09 Score=94.37 Aligned_cols=212 Identities=9% Similarity=0.036 Sum_probs=130.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.+. .+.+.+.+.. .....++.++.+|++++ +++..++
T Consensus 21 ~~~a~~l~~~--G~~vv~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 77 (260)
T PRK07063 21 AAIARAFARE--GAAVALADLDAAL---AERAAAAIAR------------DVAGARVLAVPADVTDA------ASVAAAV 77 (260)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHHHh------------ccCCceEEEEEccCCCH------HHHHHHH
Confidence 3688999988 9999999985321 1112111110 00134688999999986 4555554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|++||+||.... ...+...+++|+.++..+++++... .+..++|++||..+....
T Consensus 78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 152 (260)
T PRK07063 78 AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII----- 152 (260)
T ss_pred HHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC-----
Confidence 3 68999999996422 2345568889999998888876531 234689999997653321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||.+.+.+.+.+.. +|+++..++||.+-.+.....
T Consensus 153 -----~----------------------------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~ 199 (260)
T PRK07063 153 -----P----------------------------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDW 199 (260)
T ss_pred -----C----------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhh
Confidence 0 016899999999999888765 579999999997743221100
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
| .....+......... . .+ ..-+...+|++.+++.++...... ..+.+..+.++
T Consensus 200 --~-~~~~~~~~~~~~~~~-~---~~-----~~r~~~~~~va~~~~fl~s~~~~~--itG~~i~vdgg 253 (260)
T PRK07063 200 --W-NAQPDPAAARAETLA-L---QP-----MKRIGRPEEVAMTAVFLASDEAPF--INATCITIDGG 253 (260)
T ss_pred --h-hccCChHHHHHHHHh-c---CC-----CCCCCCHHHHHHHHHHHcCccccc--cCCcEEEECCC
Confidence 0 000011111111111 0 00 112567899999999988654321 24667777665
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.2e-09 Score=92.95 Aligned_cols=206 Identities=15% Similarity=0.088 Sum_probs=128.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|+++. +++..++
T Consensus 22 ~~l~~~l~~~--G~~Vi~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 76 (252)
T PRK07035 22 EAIAKLLAQQ--GAHVIVSSRKLD---GCQAVADAI--------------VAAGGKAEALACHIGEM------EQIDALF 76 (252)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCeEEEEEcCCCCH------HHHHHHH
Confidence 3688899988 899999998532 112222111 11123577889999876 4554443
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... ...+...+++|+.++..+++++... .+..++|++||.+.....
T Consensus 77 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 152 (252)
T PRK07035 77 AHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPG---- 152 (252)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCC----
Confidence 3 58999999985321 1234568899999988887766321 255789999996553211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+ ...|+.||.+.+.+++.+.. +|+++..+.||.+-.....
T Consensus 153 -----~~-----------------------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~- 197 (252)
T PRK07035 153 -----DF-----------------------------QGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFAS- 197 (252)
T ss_pred -----CC-----------------------------CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccc-
Confidence 01 17899999999999988865 4899999999987443211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
................ ....+...+|+|+++..++...... ..+.++.+.++
T Consensus 198 ------~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~~--~~g~~~~~dgg 249 (252)
T PRK07035 198 ------ALFKNDAILKQALAHI---------PLRRHAEPSEMAGAVLYLASDASSY--TTGECLNVDGG 249 (252)
T ss_pred ------cccCCHHHHHHHHccC---------CCCCcCCHHHHHHHHHHHhCccccC--ccCCEEEeCCC
Confidence 1111111221221110 0123567889999999988765431 13667776554
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.7e-09 Score=94.00 Aligned_cols=182 Identities=9% Similarity=0.044 Sum_probs=115.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH--
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM-- 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~-- 78 (318)
++++++|+++ .+++|+++.|+.+. ...+..+++ . .....+++++.+|+++. +++..
T Consensus 22 ~~la~~l~~~-gg~~V~~~~r~~~~-~~~~~~~~l-~-------------~~~~~~v~~~~~D~~~~------~~~~~~~ 79 (253)
T PRK07904 22 LAICERYLKN-APARVVLAALPDDP-RRDAAVAQM-K-------------AAGASSVEVIDFDALDT------DSHPKVI 79 (253)
T ss_pred HHHHHHHHhc-CCCeEEEEeCCcch-hHHHHHHHH-H-------------hcCCCceEEEEecCCCh------HHHHHHH
Confidence 3688999987 34799999996542 111111111 0 11123789999999876 34333
Q ss_pred --Hh--cCccEEEEcccccCcc----hh---HHHHHHHhHHHHHH----HHHHHHhcCCCccEEEEeccccccCCccccc
Q psy7539 79 --LS--ETIHIVYHIAATVRFD----DY---MQTYVFLNTRGTRD----MLNLSKQMIHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 79 --~~--~~~d~Vih~Aa~~~~~----~~---~~~~~~~Nv~gt~~----ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+. .++|++||++|..... .+ ..+.+++|+.++.. +++++.+. +..+||++||..+....
T Consensus 80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS~~g~~~~----- 153 (253)
T PRK07904 80 DAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSSVAGERVR----- 153 (253)
T ss_pred HHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEechhhcCCC-----
Confidence 22 2699999999874221 11 12468999988776 56666663 66899999997642210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+. ..|+.||.+.+.+.+.... +++++++++||.+..+.
T Consensus 154 ----~~~-----------------------------~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~---- 196 (253)
T PRK07904 154 ----RSN-----------------------------FVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRM---- 196 (253)
T ss_pred ----CCC-----------------------------cchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecch----
Confidence 011 6799999999877655432 68999999999774311
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
. ... . .....+..+|+|+.++.++.++.
T Consensus 197 -------~----------~~~-~-------~~~~~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 197 -------S----------AHA-K-------EAPLTVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred -------h----------ccC-C-------CCCCCCCHHHHHHHHHHHHHcCC
Confidence 0 000 0 00124689999999999997653
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.9e-09 Score=93.49 Aligned_cols=207 Identities=11% Similarity=0.085 Sum_probs=125.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|++. |++|++..+... ... +.+... + .....++.++.+|+++.. +...++
T Consensus 18 ~~ia~~l~~~--G~~v~~~~~~~~-~~~-~~~~~~--------~------~~~~~~~~~~~~D~~~~~------~~~~~~ 73 (252)
T PRK12747 18 RAIAKRLAND--GALVAIHYGNRK-EEA-EETVYE--------I------QSNGGSAFSIGANLESLH------GVEALY 73 (252)
T ss_pred HHHHHHHHHC--CCeEEEEcCCCH-HHH-HHHHHH--------H------HhcCCceEEEecccCCHH------HHHHHH
Confidence 3688899888 898887654321 111 111111 0 111235677889998752 222211
Q ss_pred -------------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCc
Q psy7539 81 -------------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 -------------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~ 139 (318)
.++|++||+||.... ...++..+++|+.|+..+++++... ....+||++||..+....
T Consensus 74 ~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~- 152 (252)
T PRK12747 74 SSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL- 152 (252)
T ss_pred HHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC-
Confidence 168999999996421 1224568889999999999877652 123589999998654321
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
+. ...|+.||.+.+.+++.++. +|+++.++.||.|.++.
T Consensus 153 --------~~-----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~ 195 (252)
T PRK12747 153 --------PD-----------------------------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM 195 (252)
T ss_pred --------CC-----------------------------chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence 00 16899999999999887654 58999999999886642
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .... .......... ......+...+|+|+++..++...... ..+..+.+.++
T Consensus 196 ~~-------~~~~-~~~~~~~~~~--------~~~~~~~~~~~dva~~~~~l~s~~~~~--~~G~~i~vdgg 249 (252)
T PRK12747 196 NA-------ELLS-DPMMKQYATT--------ISAFNRLGEVEDIADTAAFLASPDSRW--VTGQLIDVSGG 249 (252)
T ss_pred hh-------hccc-CHHHHHHHHh--------cCcccCCCCHHHHHHHHHHHcCccccC--cCCcEEEecCC
Confidence 11 1100 0111111110 001234788999999999887643321 13667777655
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.2e-09 Score=91.93 Aligned_cols=197 Identities=10% Similarity=0.044 Sum_probs=127.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+.... ...++.++.+|++++ .+.+.+...
T Consensus 20 ~ia~~l~~~--G~~v~~~~r~~~~~--------------------------~~~~~~~~~~D~~~~-----~~~~~~~~~ 66 (235)
T PRK06550 20 AQARAFLAQ--GAQVYGVDKQDKPD--------------------------LSGNFHFLQLDLSDD-----LEPLFDWVP 66 (235)
T ss_pred HHHHHHHHC--CCEEEEEeCCcccc--------------------------cCCcEEEEECChHHH-----HHHHHHhhC
Confidence 678889888 89999998864321 123678899999864 133344445
Q ss_pred CccEEEEcccccC--------cchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCCCCC
Q psy7539 82 TIHIVYHIAATVR--------FDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYPPPV 150 (318)
Q Consensus 82 ~~d~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~ 150 (318)
.+|+|||+||... ....+...+++|+.|+.++++++... .+..+||++||.++.... +
T Consensus 67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~- 135 (235)
T PRK06550 67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG----------G- 135 (235)
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC----------C-
Confidence 7999999999531 11235568999999999999887632 133589999997654321 0
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
....|+.+|...+.+....+. .|+++++++||.+.++.... .+
T Consensus 136 ---------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~------~~ 182 (235)
T PRK06550 136 ---------------------------GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA------DF 182 (235)
T ss_pred ---------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccc------cc
Confidence 017899999999988877665 48999999999886543210 00
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
............ .....+...+|+|++++.++...... ..+..+.+.++
T Consensus 183 -~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~~l~s~~~~~--~~g~~~~~~gg 231 (235)
T PRK06550 183 -EPGGLADWVARE---------TPIKRWAEPEEVAELTLFLASGKADY--MQGTIVPIDGG 231 (235)
T ss_pred -CchHHHHHHhcc---------CCcCCCCCHHHHHHHHHHHcChhhcc--CCCcEEEECCc
Confidence 111111111111 01234678899999999998654321 13566666554
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.7e-09 Score=93.95 Aligned_cols=204 Identities=15% Similarity=0.085 Sum_probs=125.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. ...+.+. . .++.++.+|++++ +++..++
T Consensus 21 ~~~a~~l~~~--G~~v~~~~~~~~--~~~~~l~-----------------~---~~~~~~~~Dl~~~------~~~~~~~ 70 (255)
T PRK06463 21 RAIAEAFLRE--GAKVAVLYNSAE--NEAKELR-----------------E---KGVFTIKCDVGNR------DQVKKSK 70 (255)
T ss_pred HHHHHHHHHC--CCEEEEEeCCcH--HHHHHHH-----------------h---CCCeEEEecCCCH------HHHHHHH
Confidence 3678899988 899888776432 1111111 1 1577899999986 4555554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHH----HHHHhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDML----NLSKQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll----~~a~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...+++|+.|+..+. ..+++ .+..++|++||..++....
T Consensus 71 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~-~~~g~iv~isS~~~~~~~~--- 146 (255)
T PRK06463 71 EVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKL-SKNGAIVNIASNAGIGTAA--- 146 (255)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh-cCCcEEEEEcCHHhCCCCC---
Confidence 3 68999999997421 1234568899999965554 44443 2456899999976643100
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.. ...|+.||.+.+.+++.+.. .|+++.+++||.+-.+....
T Consensus 147 -----~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~ 192 (255)
T PRK06463 147 -----EG-----------------------------TTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLS 192 (255)
T ss_pred -----CC-----------------------------ccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhc
Confidence 00 16799999999999988764 58999999999773321100
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . ............. ......+...+|++.+++.++...... ..+..+.+.++
T Consensus 193 ~~----~-~~~~~~~~~~~~~--------~~~~~~~~~~~~va~~~~~l~s~~~~~--~~G~~~~~dgg 246 (255)
T PRK06463 193 GK----S-QEEAEKLRELFRN--------KTVLKTTGKPEDIANIVLFLASDDARY--ITGQVIVADGG 246 (255)
T ss_pred cc----C-ccchHHHHHHHHh--------CCCcCCCcCHHHHHHHHHHHcChhhcC--CCCCEEEECCC
Confidence 00 0 0000011111111 111234577899999999988654321 13778888776
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.1e-09 Score=92.40 Aligned_cols=204 Identities=12% Similarity=0.095 Sum_probs=125.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. +++.+... .. .....++.++.+|++++ +.+..++
T Consensus 14 ~~la~~l~~~--G~~v~~~~r~~~-----~~~~~~~~-----~~------~~~~~~~~~~~~D~~~~------~~~~~~~ 69 (242)
T TIGR01829 14 TAICQRLAKD--GYRVAANCGPNE-----ERAEAWLQ-----EQ------GALGFDFRVVEGDVSSF------ESCKAAV 69 (242)
T ss_pred HHHHHHHHHC--CCEEEEEeCCCH-----HHHHHHHH-----HH------HhhCCceEEEEecCCCH------HHHHHHH
Confidence 3688999988 999999988321 11111110 00 11224788999999986 4554443
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
..+|+|||+||.... ...+...++.|+.++..+++.+ ++ .+..++|++||.++.....
T Consensus 70 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~iss~~~~~~~~--- 145 (242)
T TIGR01829 70 AKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRE-RGWGRIINISSVNGQKGQF--- 145 (242)
T ss_pred HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCcEEEEEcchhhcCCCC---
Confidence 358999999986421 1334567889999987765544 44 2567899999965432110
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
....|+.+|.+.+.+++.+.+ .+++++.++|+.+.++....
T Consensus 146 -----------------------------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~ 190 (242)
T TIGR01829 146 -----------------------------------GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA 190 (242)
T ss_pred -----------------------------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc
Confidence 016899999988888777654 58999999999886543211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+. ...+..+..+. ....+...+|+++++..++..+... ..+..+.+.++
T Consensus 191 -------~~--~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~~--~~G~~~~~~gg 239 (242)
T TIGR01829 191 -------MR--EDVLNSIVAQI---------PVGRLGRPEEIAAAVAFLASEEAGY--ITGATLSINGG 239 (242)
T ss_pred -------cc--hHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhcC--ccCCEEEecCC
Confidence 11 11222222111 1113455689999887776553221 24677877766
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.20 E-value=2e-09 Score=94.50 Aligned_cols=209 Identities=11% Similarity=0.067 Sum_probs=127.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+ + ...+.+.++ .....++.++.+|++++ +++..++
T Consensus 20 ~aia~~l~~~--G~~vi~~~r~-~--~~~~~~~~~---------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 73 (272)
T PRK08589 20 QASAIALAQE--GAYVLAVDIA-E--AVSETVDKI---------------KSNGGKAKAYHVDISDE------QQVKDFA 73 (272)
T ss_pred HHHHHHHHHC--CCEEEEEeCc-H--HHHHHHHHH---------------HhcCCeEEEEEeecCCH------HHHHHHH
Confidence 3688999988 9999999985 2 111111111 11224688999999986 4555544
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|++||+||.... ...+...+++|+.|+..+++++... .+-.++|++||.......
T Consensus 74 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 148 (272)
T PRK08589 74 SEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAAD----- 148 (272)
T ss_pred HHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCC-----
Confidence 3 57999999997421 1234567888999987777765432 112589999997654321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||.+.+.+++.++. .|+++..+.||.|..+...
T Consensus 149 -----~----------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~-- 193 (272)
T PRK08589 149 -----L----------------------------YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVD-- 193 (272)
T ss_pred -----C----------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhh--
Confidence 0 017899999999999988765 5799999999987543211
Q ss_pred CCcccCCCc--hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNING--PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...+ ...+...+.... .. ..+ ..-+...+|++++++.++...... ..+..+.+.++
T Consensus 194 -----~~~~~~~~~~~~~~~~~~-~~--~~~--~~~~~~~~~va~~~~~l~s~~~~~--~~G~~i~vdgg 251 (272)
T PRK08589 194 -----KLTGTSEDEAGKTFRENQ-KW--MTP--LGRLGKPEEVAKLVVFLASDDSSF--ITGETIRIDGG 251 (272)
T ss_pred -----hhcccchhhHHHHHhhhh-hc--cCC--CCCCcCHHHHHHHHHHHcCchhcC--cCCCEEEECCC
Confidence 1111 000000010000 00 001 113568899999999988653321 13667777665
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.9e-10 Score=97.77 Aligned_cols=200 Identities=11% Similarity=0.073 Sum_probs=121.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |.+|+++.|+.. .. +.+.+.+ .....++.++.+|++++ +++..++
T Consensus 14 ~~la~~l~~~--G~~v~~~~r~~~--~~-~~~~~~l--------------~~~~~~~~~~~~Dl~~~------~~i~~~~ 68 (254)
T TIGR02415 14 KGIAERLAKD--GFAVAVADLNEE--TA-KETAKEI--------------NQAGGKAVAYKLDVSDK------DQVFSAI 68 (254)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH--HH-HHHHHHH--------------HhcCCeEEEEEcCCCCH------HHHHHHH
Confidence 3688999988 899999988532 11 1111110 11234688999999986 4555543
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... ...++..+++|+.++..+++++... ....++|++||..+....
T Consensus 69 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 144 (254)
T TIGR02415 69 DQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN---- 144 (254)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC----
Confidence 3 57999999997421 1334568999999998877766531 123589999996553221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.+|.+.+.+++.... .++.+.+++||.+.......
T Consensus 145 ------~----------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~ 190 (254)
T TIGR02415 145 ------P----------------------------ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE 190 (254)
T ss_pred ------C----------------------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhh
Confidence 0 017899999999999887654 47899999999774422110
Q ss_pred CCCcccCCC-ch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 219 LPGWTDNIN-GP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 219 ~~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
......... .+ ......+.. ......++..+|++.++..++....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~l~~~~~ 237 (254)
T TIGR02415 191 IDEETSEIAGKPIGEGFEEFSS---------EIALGRPSEPEDVAGLVSFLASEDS 237 (254)
T ss_pred hhhhhhhcccCchHHHHHHHHh---------hCCCCCCCCHHHHHHHHHhhccccc
Confidence 000000000 00 000000000 0011237888999999999988754
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.9e-10 Score=99.09 Aligned_cols=145 Identities=13% Similarity=0.130 Sum_probs=101.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. ++... ...+++++.+|++++ +++..++
T Consensus 15 ~~la~~l~~~--G~~V~~~~r~~~------~~~~~-----------------~~~~~~~~~~Dl~~~------~~~~~~~ 63 (274)
T PRK05693 15 RALADAFKAA--GYEVWATARKAE------DVEAL-----------------AAAGFTAVQLDVNDG------AALARLA 63 (274)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHH-----------------HHCCCeEEEeeCCCH------HHHHHHH
Confidence 3678889887 999999998532 11111 012467889999876 4555444
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
.++|+|||+||.... ...+...+++|+.|+.++++++... .+..++|++||..+....
T Consensus 64 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------ 137 (274)
T PRK05693 64 EELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT------ 137 (274)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC------
Confidence 368999999996422 1345568899999999999887431 133578999996653210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccc
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPI 214 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~ 214 (318)
| ....|+.+|.+.+.+...+.. .|+++++++||.|...
T Consensus 138 ----~----------------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 138 ----P----------------------------FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred ----C----------------------------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 0 017899999999988776543 5899999999988653
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.5e-09 Score=91.86 Aligned_cols=205 Identities=14% Similarity=0.063 Sum_probs=126.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|++. |++|+++.|+.+. .+.+.+.+ .....++.++.+|++++ +++..+++
T Consensus 21 ~ia~~l~~~--G~~v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~~ 75 (254)
T PRK07478 21 AAAKLFARE--GAKVVVGARRQAE---LDQLVAEI--------------RAEGGEAVALAGDVRDE------AYAKALVA 75 (254)
T ss_pred HHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCcEEEEEcCCCCH------HHHHHHHH
Confidence 688999988 9999999996321 11111111 11124688899999986 45555543
Q ss_pred -------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.+|++||+||.... ....+..+++|+.++..+.+++ ++. +..++|++||..++...
T Consensus 76 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~~~~~---- 150 (254)
T PRK07478 76 LAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVGHTAG---- 150 (254)
T ss_pred HHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHhhccC----
Confidence 68999999997421 1234568899998877765544 332 45689999997654210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
... ...|+.||.+.+.+.+.+.. +|+.+.+++||.+-.+...
T Consensus 151 ----~~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~- 196 (254)
T PRK07478 151 ----FPG-----------------------------MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGR- 196 (254)
T ss_pred ----CCC-----------------------------cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccc-
Confidence 000 17899999999999887765 4799999999987443110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ........... .....+...+|++++++.++...... ..+.++.+.++
T Consensus 197 ------~~~~-~~~~~~~~~~~--------~~~~~~~~~~~va~~~~~l~s~~~~~--~~G~~~~~dgg 248 (254)
T PRK07478 197 ------AMGD-TPEALAFVAGL--------HALKRMAQPEEIAQAALFLASDAASF--VTGTALLVDGG 248 (254)
T ss_pred ------cccC-CHHHHHHHHhc--------CCCCCCcCHHHHHHHHHHHcCchhcC--CCCCeEEeCCc
Confidence 0000 00111111110 01123568899999999988654321 13667766554
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.9e-09 Score=95.64 Aligned_cols=181 Identities=10% Similarity=0.054 Sum_probs=119.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 54 ~~la~~La~~--G~~Vi~~~R~~~---~l~~~~~~l--------------~~~~~~~~~~~~Dl~d~------~~v~~~~ 108 (293)
T PRK05866 54 EAAAEQFARR--GATVVAVARRED---LLDAVADRI--------------TRAGGDAMAVPCDLSDL------DAVDALV 108 (293)
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHH
Confidence 3688899888 999999999632 111121111 11123578899999986 4666655
Q ss_pred c-------CccEEEEcccccCcc---------hhHHHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRFD---------DYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~---------~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~~~~ 140 (318)
+ ++|+|||+||..... ......+++|+.|+.++++++. + .+..++|++||.++....
T Consensus 109 ~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~~~g~iv~isS~~~~~~~-- 185 (293)
T PRK05866 109 ADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLE-RGDGHIINVATWGVLSEA-- 185 (293)
T ss_pred HHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcEEEEECChhhcCCC--
Confidence 5 789999999974221 2334578899999888877654 3 255789999996543210
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
.|. ...|+.||.+.+.++..... +|+++++++||.+-.+.
T Consensus 186 -------~p~----------------------------~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~- 229 (293)
T PRK05866 186 -------SPL----------------------------FSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPM- 229 (293)
T ss_pred -------CCC----------------------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcc-
Confidence 010 17899999999988877644 58999999999663311
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
.. .. ... .....+..+++|+.++.++.+.
T Consensus 230 ----------~~----------~~-~~~-----~~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 230 ----------IA----------PT-KAY-----DGLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred ----------cc----------cc-ccc-----cCCCCCCHHHHHHHHHHHHhcC
Confidence 00 00 000 0123468899999999999764
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.1e-10 Score=96.16 Aligned_cols=209 Identities=12% Similarity=0.093 Sum_probs=131.1
Q ss_pred hhHHHHHhhCCCcE-EEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~-V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++.|+++ |++ |+++.|+... .. .+...+ .....++.++.+|++++ +++..++
T Consensus 21 ~la~~l~~~--G~~~V~~~~r~~~~--~~-~~~~~l--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 75 (260)
T PRK06198 21 AIARAFAER--GAAGLVICGRNAEK--GE-AQAAEL--------------EALGAKAVFVQADLSDV------EDCRRVV 75 (260)
T ss_pred HHHHHHHHC--CCCeEEEEcCCHHH--HH-HHHHHH--------------HhcCCeEEEEEccCCCH------HHHHHHH
Confidence 578889888 886 9999885321 11 111110 11124678899999976 4555554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---C-CCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---I-HLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~-~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...+++|+.++.++++++.+. . ...++|++||..+++...
T Consensus 76 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~--- 152 (260)
T PRK06198 76 AAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP--- 152 (260)
T ss_pred HHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC---
Confidence 3 58999999997421 1234567899999999999887542 1 124699999977654211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
....|+.+|...|.+.+.+.. .+++++.++|+.+.+.....
T Consensus 153 -----------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~ 197 (260)
T PRK06198 153 -----------------------------------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDR 197 (260)
T ss_pred -----------------------------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhh
Confidence 017899999999999887654 46899999999887643210
Q ss_pred CCCcccCCC-chHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNIN-GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ..+. ....++..... ......+++.+|+++++..++..... ...++.+.+.++
T Consensus 198 ~~---~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~l~~~~~~--~~~G~~~~~~~~ 253 (260)
T PRK06198 198 IQ---REFHGAPDDWLEKAAA---------TQPFGRLLDPDEVARAVAFLLSDESG--LMTGSVIDFDQS 253 (260)
T ss_pred hh---hhccCCChHHHHHHhc---------cCCccCCcCHHHHHHHHHHHcChhhC--CccCceEeECCc
Confidence 00 0000 11111111111 11123568999999999998865432 124778887766
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.8e-10 Score=99.38 Aligned_cols=162 Identities=11% Similarity=0.024 Sum_probs=104.7
Q ss_pred hHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc-
Q psy7539 3 LLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE- 81 (318)
Q Consensus 3 l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~- 81 (318)
++++|+++ |++|+++.|+..... ..+++.+|+++. +++..+++
T Consensus 1 ~a~~l~~~--G~~Vv~~~r~~~~~~----------------------------~~~~~~~Dl~~~------~~v~~~~~~ 44 (241)
T PRK12428 1 TARLLRFL--GARVIGVDRREPGMT----------------------------LDGFIQADLGDP------ASIDAAVAA 44 (241)
T ss_pred ChHHHHhC--CCEEEEEeCCcchhh----------------------------hhHhhcccCCCH------HHHHHHHHH
Confidence 46788888 999999999643210 123568899876 56666665
Q ss_pred ---CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCc--ccccccCCCCCChhHH
Q psy7539 82 ---TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNV 155 (318)
Q Consensus 82 ---~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~ 155 (318)
++|+|||+||... ..++...+++|+.++..+++++... ....+||++||..+++... +..|...... .
T Consensus 45 ~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~---~-- 118 (241)
T PRK12428 45 LPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATA---S-- 118 (241)
T ss_pred hcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccc---h--
Confidence 5899999999753 3456789999999999999998752 1235899999987764211 1111000000 0
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhh----h-cCCcEEEecccccccc
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYM----E-AGMPCMILRPSIIIPI 214 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~-~~~~~~ilR~~~v~G~ 214 (318)
+ ++.+. ............|+.||.+.+.+.+... . +|+++.+++||.+.++
T Consensus 119 ------~-~~~~~-~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~ 174 (241)
T PRK12428 119 ------F-DEGAA-WLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTP 174 (241)
T ss_pred ------H-HHHHH-hhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCc
Confidence 0 00000 0000001112789999999998887766 2 5899999999988664
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.1e-09 Score=90.99 Aligned_cols=207 Identities=12% Similarity=0.062 Sum_probs=129.3
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
+++++|+++ |++|+++.|+.+. .+.+.+.+. . .....++.++.+|+++. +++..++
T Consensus 24 ~~a~~l~~~--G~~v~~~~r~~~~---~~~~~~~l~--------~----~~~~~~~~~~~~Dl~~~------~~~~~~~~ 80 (257)
T PRK09242 24 AIAREFLGL--GADVLIVARDADA---LAQARDELA--------E----EFPEREVHGLAADVSDD------EDRRAILD 80 (257)
T ss_pred HHHHHHHHc--CCEEEEEeCCHHH---HHHHHHHHH--------h----hCCCCeEEEEECCCCCH------HHHHHHHH
Confidence 678889888 8999999995321 112211110 0 00124788899999876 4544433
Q ss_pred ------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 81 ------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
.++|+|||+||.... ...+...+.+|+.++..+++++... .+..++|++||..+.....
T Consensus 81 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----- 155 (257)
T PRK09242 81 WVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVR----- 155 (257)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCC-----
Confidence 368999999996321 2345568899999999998887531 2456899999976643210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
+ ...|+.+|.+.+.+++.++. .+++++.++||.+.++....
T Consensus 156 ----~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~-- 200 (257)
T PRK09242 156 ----S-----------------------------GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG-- 200 (257)
T ss_pred ----C-----------------------------CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccc--
Confidence 0 17899999999999887654 58999999999886643211
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
......+........ ...-+...+|++.++..++...... ..+..+.+.++
T Consensus 201 -----~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~~--~~g~~i~~~gg 251 (257)
T PRK09242 201 -----PLSDPDYYEQVIERT---------PMRRVGEPEEVAAAVAFLCMPAASY--ITGQCIAVDGG 251 (257)
T ss_pred -----ccCChHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccc--ccCCEEEECCC
Confidence 111111111111110 1122456789999998888643221 13667777654
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.1e-09 Score=93.77 Aligned_cols=204 Identities=9% Similarity=-0.009 Sum_probs=129.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... .+.+. .....++.++.+|+++. +++..++
T Consensus 20 ~~ia~~l~~~--G~~V~~~~r~~~~---~~~~~-----------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 71 (261)
T PRK08265 20 AAVARALVAA--GARVAIVDIDADN---GAAVA-----------------ASLGERARFIATDITDD------AAIERAV 71 (261)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH---HHHHH-----------------HHhCCeeEEEEecCCCH------HHHHHHH
Confidence 3688999988 9999999995321 11111 11234688999999986 4565554
Q ss_pred c-------CccEEEEcccccC------cchhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVR------FDDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~------~~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ .+|++||+||... ....+...+++|+.++..+++++... .+-.++|++||..+....
T Consensus 72 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------- 144 (261)
T PRK08265 72 ATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ------- 144 (261)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-------
Confidence 3 5799999999632 12345678899999999998877642 133589999996553211
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
+ ....|+.+|...+.+.+.... +|+++.+++||.+..+...
T Consensus 145 ---~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~---- 189 (261)
T PRK08265 145 ---T----------------------------GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMD---- 189 (261)
T ss_pred ---C----------------------------CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhh----
Confidence 0 016899999999998887664 4899999999976442111
Q ss_pred cccCCCc-hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ........... ..+ ..-+...+|+|.++..++...... ..+..+.+.++
T Consensus 190 ---~~~~~~~~~~~~~~~~------~~p--~~r~~~p~dva~~~~~l~s~~~~~--~tG~~i~vdgg 243 (261)
T PRK08265 190 ---ELSGGDRAKADRVAAP------FHL--LGRVGDPEEVAQVVAFLCSDAASF--VTGADYAVDGG 243 (261)
T ss_pred ---hhcccchhHHHHhhcc------cCC--CCCccCHHHHHHHHHHHcCccccC--ccCcEEEECCC
Confidence 0000 00000001000 011 113567899999999998754321 24677777665
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.1e-10 Score=99.49 Aligned_cols=163 Identities=12% Similarity=0.062 Sum_probs=101.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+...++ + . .....+++++.+|+++. +++..++
T Consensus 30 ~~~a~~l~~~--G~~vi~~~r~~~~--~~~~~~~l-~--------~----~~~~~~~~~~~~Dl~d~------~~v~~~~ 86 (306)
T PRK06197 30 YETAAALAAK--GAHVVLAVRNLDK--GKAAAARI-T--------A----ATPGADVTLQELDLTSL------ASVRAAA 86 (306)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHH-H--------H----hCCCCceEEEECCCCCH------HHHHHHH
Confidence 3688999988 8999999995321 11111111 0 0 11124688999999986 4555544
Q ss_pred c-------CccEEEEcccccCcc-----hhHHHHHHHhHHH----HHHHHHHHHhcCCCccEEEEeccccccCCc-cccc
Q psy7539 81 E-------TIHIVYHIAATVRFD-----DYMQTYVFLNTRG----TRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~-----~~~~~~~~~Nv~g----t~~ll~~a~~~~~~~~~v~~SS~~~~~~~~-~~~E 143 (318)
+ ++|+|||+||..... ..+...+++|+.| +..+++.+++. +..+||++||..+..... ..++
T Consensus 87 ~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~~~~ 165 (306)
T PRK06197 87 DALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSSGGHRIRAAIHFDD 165 (306)
T ss_pred HHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECCHHHhccCCCCccc
Confidence 3 589999999974221 2345678899999 66677777663 557999999976432111 1111
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEE--eccccccc
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI--LRPSIIIP 213 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~i--lR~~~v~G 213 (318)
.....+. .....|+.||++.+.+...+.. .++++.+ +.||.|-.
T Consensus 166 ~~~~~~~--------------------------~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T 215 (306)
T PRK06197 166 LQWERRY--------------------------NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNT 215 (306)
T ss_pred cCcccCC--------------------------CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccC
Confidence 1100111 0116899999999998887655 3555544 47887744
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.2e-09 Score=91.46 Aligned_cols=211 Identities=9% Similarity=0.015 Sum_probs=130.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 24 ~~ia~~l~~~--G~~vv~~~~~~~---~~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 78 (265)
T PRK07097 24 FAIAKAYAKA--GATIVFNDINQE---LVDKGLAAY--------------RELGIEAHGYVCDVTDE------DGVQAMV 78 (265)
T ss_pred HHHHHHHHHC--CCeEEEEeCCHH---HHHHHHHHH--------------HhcCCceEEEEcCCCCH------HHHHHHH
Confidence 3688999988 999999887532 111121111 11123688999999986 4665555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||.... ...+...+++|+.|...+.+++... .+..+||++||.......
T Consensus 79 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 153 (265)
T PRK07097 79 SQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR----- 153 (265)
T ss_pred HHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC-----
Confidence 3 48999999997532 1334567889999988877766431 245789999996542210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.+|.+.+.+.+.+.+ .|+.++.++||.+..+...+.
T Consensus 154 ----~~-----------------------------~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 200 (265)
T PRK07097 154 ----ET-----------------------------VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPL 200 (265)
T ss_pred ----CC-----------------------------CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhh
Confidence 00 17899999999999988766 489999999998866432211
Q ss_pred CCcccCCCc-hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ...+ ...+....... .+ ...+...+|+|..++.++...... ..+..+.+.++
T Consensus 201 ~~~--~~~~~~~~~~~~~~~~-------~~--~~~~~~~~dva~~~~~l~~~~~~~--~~g~~~~~~gg 256 (265)
T PRK07097 201 REL--QADGSRHPFDQFIIAK-------TP--AARWGDPEDLAGPAVFLASDASNF--VNGHILYVDGG 256 (265)
T ss_pred hhc--cccccchhHHHHHHhc-------CC--ccCCcCHHHHHHHHHHHhCcccCC--CCCCEEEECCC
Confidence 000 0000 00111111110 00 123567899999999998763321 13667777665
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.6e-09 Score=91.60 Aligned_cols=212 Identities=14% Similarity=0.105 Sum_probs=130.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+...+. .....++.++.+|++++ +++..++
T Consensus 20 ~~la~~l~~~--G~~Vv~~~r~~~---~~~~~~~~---------------~~~~~~~~~~~~Dl~~~------~~v~~~~ 73 (263)
T PRK08226 20 EGIARVFARH--GANLILLDISPE---IEKLADEL---------------CGRGHRCTAVVADVRDP------ASVAAAI 73 (263)
T ss_pred HHHHHHHHHC--CCEEEEecCCHH---HHHHHHHH---------------HHhCCceEEEECCCCCH------HHHHHHH
Confidence 3688999988 999999988632 22222211 11124678899999986 4555554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||.... ....+..+++|+.++..+++++... .+..+||++||......
T Consensus 74 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------ 147 (263)
T PRK08226 74 KRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV------ 147 (263)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc------
Confidence 3 67999999997421 1234457899999999999887531 24468999999654211
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
+.+ ....|+.+|.+.|.++..+.. .++++..++||.+.++.....
T Consensus 148 ---~~~----------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~ 196 (263)
T PRK08226 148 ---ADP----------------------------GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESI 196 (263)
T ss_pred ---CCC----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhh
Confidence 000 016899999999999887765 479999999998866432111
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..+. ....+..++.....+. ....+...+|+++++..++...... ..+..+-+.++
T Consensus 197 ~~~~-~~~~~~~~~~~~~~~~---------p~~~~~~~~~va~~~~~l~~~~~~~--~~g~~i~~dgg 252 (263)
T PRK08226 197 ARQS-NPEDPESVLTEMAKAI---------PLRRLADPLEVGELAAFLASDESSY--LTGTQNVIDGG 252 (263)
T ss_pred hhhc-cCCCcHHHHHHHhccC---------CCCCCCCHHHHHHHHHHHcCchhcC--CcCceEeECCC
Confidence 1000 0001112222222211 1123568899999998877543221 13556666554
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.5e-09 Score=92.81 Aligned_cols=205 Identities=14% Similarity=0.047 Sum_probs=129.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 23 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 77 (253)
T PRK05867 23 KRVALAYVEA--GAQVAIAARHLD---ALEKLADEI--------------GTSGGKVVPVCCDVSQH------QQVTSML 77 (253)
T ss_pred HHHHHHHHHC--CCEEEEEcCCHH---HHHHHHHHH--------------HhcCCeEEEEEccCCCH------HHHHHHH
Confidence 3688999988 999999988532 122222111 11124678899999986 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.++..+++++... .+ -.++|++||.++.....
T Consensus 78 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--- 154 (253)
T PRK05867 78 DQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV--- 154 (253)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC---
Confidence 3 78999999997432 1234567889999999999887532 11 24689999865421100
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+.. ...|+.+|.+.+.+.+.++. +|+++..++||.+-.+...
T Consensus 155 ----~~~-----------------------------~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~- 200 (253)
T PRK05867 155 ----PQQ-----------------------------VSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE- 200 (253)
T ss_pred ----CCC-----------------------------ccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccc-
Confidence 000 06899999999999988765 5899999999988442211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ......+... . + ..-+...+|+|+++..++...... ..+..+.+.++
T Consensus 201 ------~~---~~~~~~~~~~----~---~--~~r~~~p~~va~~~~~L~s~~~~~--~tG~~i~vdgG 249 (253)
T PRK05867 201 ------PY---TEYQPLWEPK----I---P--LGRLGRPEELAGLYLYLASEASSY--MTGSDIVIDGG 249 (253)
T ss_pred ------cc---hHHHHHHHhc----C---C--CCCCcCHHHHHHHHHHHcCcccCC--cCCCeEEECCC
Confidence 11 1111111111 0 1 123568899999999988653321 23677777665
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.2e-09 Score=92.50 Aligned_cols=193 Identities=13% Similarity=0.099 Sum_probs=121.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCC-HHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKN-SRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~-~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
+++++.|+++ |++|+++.|+..... ....+.+.. ..+ .....++.++.+|++++ +++..+
T Consensus 20 ~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~------~~~~~~~~~~~~D~~~~------~~i~~~ 80 (273)
T PRK08278 20 LAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAA-----EEI------EAAGGQALPLVGDVRDE------DQVAAA 80 (273)
T ss_pred HHHHHHHHHC--CCEEEEEecccccccchhhHHHHHH-----HHH------HhcCCceEEEEecCCCH------HHHHHH
Confidence 3688899988 899999999754321 111121110 011 11234688999999987 566555
Q ss_pred hc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 80 SE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
++ ++|+|||+||.... .......+++|+.|+.++++++... .+-.++|++||.......
T Consensus 81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---- 156 (273)
T PRK08278 81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK---- 156 (273)
T ss_pred HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc----
Confidence 44 68999999997422 1234567889999999999998642 123478888885421110
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
...+ ...|+.||.+.|.+++.+.. +++.++.+.|+.++..
T Consensus 157 ---~~~~-----------------------------~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t---- 200 (273)
T PRK08278 157 ---WFAP-----------------------------HTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIAT---- 200 (273)
T ss_pred ---ccCC-----------------------------cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCcccc----
Confidence 0011 17899999999999998865 4789999999832211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
........+ ......+...+|++++++.++....
T Consensus 201 ------------~~~~~~~~~--------~~~~~~~~~p~~va~~~~~l~~~~~ 234 (273)
T PRK08278 201 ------------AAVRNLLGG--------DEAMRRSRTPEIMADAAYEILSRPA 234 (273)
T ss_pred ------------HHHHhcccc--------cccccccCCHHHHHHHHHHHhcCcc
Confidence 001111000 0112246788999999999887644
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.7e-10 Score=96.02 Aligned_cols=204 Identities=11% Similarity=0.070 Sum_probs=127.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... .++.++.+|++++ +++..++
T Consensus 20 ~~ia~~l~~~--G~~Vi~~~r~~~~~----------------------------~~~~~~~~D~~~~------~~i~~~~ 63 (258)
T PRK06398 20 KAVVNRLKEE--GSNVINFDIKEPSY----------------------------NDVDYFKVDVSNK------EQVIKGI 63 (258)
T ss_pred HHHHHHHHHC--CCeEEEEeCCcccc----------------------------CceEEEEccCCCH------HHHHHHH
Confidence 3688899888 99999999864321 2678899999986 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||.... ...+...+++|+.|+..+++++... .+..++|++||..+....
T Consensus 64 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 138 (258)
T PRK06398 64 DYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT----- 138 (258)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC-----
Confidence 3 68999999997421 2334567899999999988877532 245689999997654321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+ ...|+.+|.+.+.+.+.+.. .++.+..++||.+-.+......
T Consensus 139 ----~~-----------------------------~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~ 185 (258)
T PRK06398 139 ----RN-----------------------------AAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAA 185 (258)
T ss_pred ----CC-----------------------------CchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhh
Confidence 11 17899999999999988765 2488999999977443211000
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+..+ ..+... ....... ........+...+|+|.+++.++...... ..+..+.+.++
T Consensus 186 ~~~~~-~~~~~~-~~~~~~~-----~~~~~~~~~~~p~eva~~~~~l~s~~~~~--~~G~~i~~dgg 243 (258)
T PRK06398 186 ELEVG-KDPEHV-ERKIREW-----GEMHPMKRVGKPEEVAYVVAFLASDLASF--ITGECVTVDGG 243 (258)
T ss_pred hcccc-CChhhh-HHHHHhh-----hhcCCcCCCcCHHHHHHHHHHHcCcccCC--CCCcEEEECCc
Confidence 00000 000000 0000000 00011124677899999999888653321 13667777665
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.3e-09 Score=91.95 Aligned_cols=206 Identities=12% Similarity=0.036 Sum_probs=128.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |.+|+++.|+... .+++.+.+ .....++.++.+|++++ +++..+++
T Consensus 22 ~ia~~l~~~--G~~v~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~i~~~~~ 76 (253)
T PRK06172 22 ATALAFARE--GAKVVVADRDAAG---GEETVALI--------------REAGGEALFVACDVTRD------AEVKALVE 76 (253)
T ss_pred HHHHHHHHc--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCceEEEEcCCCCH------HHHHHHHH
Confidence 678899888 8999999996321 11222111 11234688999999986 45555443
Q ss_pred -------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 82 -------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
++|+|||+||.... ...+...+++|+.++..+++++... .+..++|++||..++....
T Consensus 77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~---- 152 (253)
T PRK06172 77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP---- 152 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC----
Confidence 56999999996421 1234567889999997776654321 2446899999976543210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
. ...|+.+|.+.+.+.+.+.. +|+++.++.||.+-.+...
T Consensus 153 -----~-----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~-- 196 (253)
T PRK06172 153 -----K-----------------------------MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFR-- 196 (253)
T ss_pred -----C-----------------------------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhh--
Confidence 0 17899999999999888765 4799999999977332111
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.......-......... ...-+...+|++..++.++...... ..+.++++.++
T Consensus 197 -----~~~~~~~~~~~~~~~~~--------~~~~~~~p~~ia~~~~~l~~~~~~~--~~G~~i~~dgg 249 (253)
T PRK06172 197 -----RAYEADPRKAEFAAAMH--------PVGRIGKVEEVASAVLYLCSDGASF--TTGHALMVDGG 249 (253)
T ss_pred -----hhcccChHHHHHHhccC--------CCCCccCHHHHHHHHHHHhCccccC--cCCcEEEECCC
Confidence 11100011111111110 0123567899999999888754321 24777887776
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.2e-09 Score=97.10 Aligned_cols=186 Identities=13% Similarity=0.120 Sum_probs=118.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. ..+.+.+. + .....++.++.+|++++ ++++.++
T Consensus 22 ~~la~~la~~--G~~Vvl~~R~~~---~l~~~~~~--------l------~~~g~~~~~v~~Dv~d~------~~v~~~~ 76 (334)
T PRK07109 22 RATARAFARR--GAKVVLLARGEE---GLEALAAE--------I------RAAGGEALAVVADVADA------EAVQAAA 76 (334)
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHH--------H------HHcCCcEEEEEecCCCH------HHHHHHH
Confidence 3678899988 999999998532 11111111 1 11234788899999986 4666554
Q ss_pred c-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHH----HHhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNL----SKQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~----a~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|++||+||...+. ..+...+++|+.|+.++..+ +.+. +..+||++||..++...
T Consensus 77 ~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS~~~~~~~---- 151 (334)
T PRK07109 77 DRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGSALAYRSI---- 151 (334)
T ss_pred HHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCChhhccCC----
Confidence 3 689999999974221 23456788888776665544 4442 45689999998765421
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEecccccccccC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G~~~ 216 (318)
|. ...|+.+|.+.+.+...... .++.+++++|+.+-.+.
T Consensus 152 ------~~----------------------------~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~- 196 (334)
T PRK07109 152 ------PL----------------------------QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ- 196 (334)
T ss_pred ------Cc----------------------------chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch-
Confidence 00 17899999999888766543 25899999999763311
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
.. ....... ........+...+|+|++++.++.++
T Consensus 197 ---~~----------~~~~~~~-------~~~~~~~~~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 197 ---FD----------WARSRLP-------VEPQPVPPIYQPEVVADAILYAAEHP 231 (334)
T ss_pred ---hh----------hhhhhcc-------ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence 00 0000000 01111235678999999999999764
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4e-09 Score=91.43 Aligned_cols=207 Identities=13% Similarity=0.033 Sum_probs=128.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+... .+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 15 ~~ia~~l~~~--G~~Vi~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 69 (252)
T PRK07677 15 KAMAKRFAEE--GANVVITGRTKEK---LEEAKLEI--------------EQFPGQVLTVQMDVRNP------EDVQKMV 69 (252)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCcEEEEEecCCCH------HHHHHHH
Confidence 3678889888 9999999986321 11221111 11124788999999886 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... ...++..+++|+.|+.++++++.+. .+ ..+||++||.++....
T Consensus 70 ~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~---- 145 (252)
T PRK07677 70 EQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG---- 145 (252)
T ss_pred HHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC----
Confidence 3 67999999985321 1234568999999999999988531 12 3579999997653210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecccccccccCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G~~~~ 217 (318)
+ ....|+.+|.+.+.+.+..+. +|+++..++||.+.+....
T Consensus 146 ------~----------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~ 191 (252)
T PRK07677 146 ------P----------------------------GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGA 191 (252)
T ss_pred ------C----------------------------CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccccccc
Confidence 0 016799999999988876433 4899999999988532110
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .+.........+.+.. ...-+...+|++.++..++..... ...+..+.+.++
T Consensus 192 ~------~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~--~~~g~~~~~~gg 244 (252)
T PRK07677 192 D------KLWESEEAAKRTIQSV---------PLGRLGTPEEIAGLAYFLLSDEAA--YINGTCITMDGG 244 (252)
T ss_pred c------cccCCHHHHHHHhccC---------CCCCCCCHHHHHHHHHHHcCcccc--ccCCCEEEECCC
Confidence 0 0111112222222211 112367889999998887765321 123667777655
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.4e-09 Score=95.00 Aligned_cols=206 Identities=13% Similarity=0.048 Sum_probs=127.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+.+. .+.+.+.+ .....++.++.+|++++ +++..+++
T Consensus 24 ~la~~l~~~--G~~V~~~~r~~~~---~~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~i~~~~~ 78 (264)
T PRK07576 24 GIAQAFARA--GANVAVASRSQEK---VDAAVAQL--------------QQAGPEGLGVSADVRDY------AAVEAAFA 78 (264)
T ss_pred HHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HHhCCceEEEECCCCCH------HHHHHHHH
Confidence 578889887 9999999996321 11111110 11124678899999876 45655543
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCccccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
++|+|||+||.... ...+...+++|+.|+.++++++... ..-.+||++||..+....
T Consensus 79 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~------- 151 (264)
T PRK07576 79 QIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPM------- 151 (264)
T ss_pred HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCC-------
Confidence 57999999985321 2335567889999999999987642 122589999997553210
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
| ....|+.+|.+.|.+++.... ++++++.++|+.+.+.... .
T Consensus 152 ---~----------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~--~- 197 (264)
T PRK07576 152 ---P----------------------------MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM--A- 197 (264)
T ss_pred ---C----------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH--h-
Confidence 0 016899999999999987654 5789999999977542110 0
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .+........... . ....+....|+|.+++.++...... ..+..+.+.++
T Consensus 198 ---~~-~~~~~~~~~~~~~---~-----~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~~~gg 249 (264)
T PRK07576 198 ---RL-APSPELQAAVAQS---V-----PLKRNGTKQDIANAALFLASDMASY--ITGVVLPVDGG 249 (264)
T ss_pred ---hc-ccCHHHHHHHHhc---C-----CCCCCCCHHHHHHHHHHHcChhhcC--ccCCEEEECCC
Confidence 00 0111111111100 0 1124567899999999998753321 13556666655
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.5e-09 Score=89.79 Aligned_cols=206 Identities=14% Similarity=0.045 Sum_probs=122.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
++++.|+++ |++|+++.++.. ...+.+...+ .....++.++.+|++++ +++..++
T Consensus 17 ~la~~l~~~--g~~v~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~~ 72 (248)
T PRK06947 17 ATAVLAAAR--GWSVGINYARDA--AAAEETADAV--------------RAAGGRACVVAGDVANE------ADVIAMFD 72 (248)
T ss_pred HHHHHHHHC--CCEEEEEeCCCH--HHHHHHHHHH--------------HhcCCcEEEEEeccCCH------HHHHHHHH
Confidence 578889888 888877665321 1111111111 11234788999999986 4555443
Q ss_pred ------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHH-hcC--C---CccEEEEeccccccCCcc
Q psy7539 81 ------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSK-QMI--H---LQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~-~~~--~---~~~~v~~SS~~~~~~~~~ 140 (318)
..+|+|||+||.... ...+...+++|+.++..+++++. .+. + -.+||++||..+....
T Consensus 73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-- 150 (248)
T PRK06947 73 AVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS-- 150 (248)
T ss_pred HHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC--
Confidence 268999999996421 12234578899999988875443 321 1 1259999996553210
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
+. ....|+.||.+.+.++..++. .+++++++|||.+..+..
T Consensus 151 --------~~---------------------------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~ 195 (248)
T PRK06947 151 --------PN---------------------------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIH 195 (248)
T ss_pred --------CC---------------------------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccc
Confidence 00 015799999999988887765 479999999998855321
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . ..+ ...... ... .+ ..-+..++|+++.++.++...... ..+..+.+.++
T Consensus 196 ~~------~-~~~-~~~~~~-~~~------~~--~~~~~~~e~va~~~~~l~~~~~~~--~~G~~~~~~gg 247 (248)
T PRK06947 196 AS------G-GQP-GRAARL-GAQ------TP--LGRAGEADEVAETIVWLLSDAASY--VTGALLDVGGG 247 (248)
T ss_pred cc------c-CCH-HHHHHH-hhc------CC--CCCCcCHHHHHHHHHHHcCccccC--cCCceEeeCCC
Confidence 10 0 011 111111 110 01 112467899999999988765421 23666666543
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.9e-09 Score=95.21 Aligned_cols=188 Identities=11% Similarity=0.076 Sum_probs=119.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++++... .+ .....++.++.+|++++ +++..++
T Consensus 21 ~aia~~la~~--G~~Vvl~~R~~~------~l~~~~~-----~~------~~~g~~~~~~~~Dv~d~------~~v~~~~ 75 (330)
T PRK06139 21 QATAEAFARR--GARLVLAARDEE------ALQAVAE-----EC------RALGAEVLVVPTDVTDA------DQVKALA 75 (330)
T ss_pred HHHHHHHHHC--CCEEEEEECCHH------HHHHHHH-----HH------HhcCCcEEEEEeeCCCH------HHHHHHH
Confidence 3678899988 999999999532 2222111 01 11234678889999986 4666554
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
..+|++||+||.... ...+...+++|+.|+.++..++... .+..++|++||..++...
T Consensus 76 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~----- 150 (330)
T PRK06139 76 TQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ----- 150 (330)
T ss_pred HHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC-----
Confidence 368999999996422 1334568999999999887776421 234589999997654321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecccccccccCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~ 218 (318)
|. ...|+.||.+.+.+...... .++.++.+.||.+.++...
T Consensus 151 -----p~----------------------------~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~- 196 (330)
T PRK06139 151 -----PY----------------------------AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFR- 196 (330)
T ss_pred -----CC----------------------------chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccc-
Confidence 10 17899999986666655433 3789999999987543210
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
+..+. .+ ........+.+.+|+|++++.++.++.
T Consensus 197 ---~~~~~-----------~~------~~~~~~~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 197 ---HGANY-----------TG------RRLTPPPPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred ---ccccc-----------cc------ccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 00000 00 001112346789999999999997653
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.7e-09 Score=89.69 Aligned_cols=204 Identities=9% Similarity=0.032 Sum_probs=128.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|... +.+.+.. .....++.++.+|+++. +++..++
T Consensus 22 ~aia~~l~~~--G~~vv~~~~~~~-----~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 74 (251)
T PRK12481 22 QGMAIGLAKA--GADIVGVGVAEA-----PETQAQV--------------EALGRKFHFITADLIQQ------KDIDSIV 74 (251)
T ss_pred HHHHHHHHHC--CCEEEEecCchH-----HHHHHHH--------------HHcCCeEEEEEeCCCCH------HHHHHHH
Confidence 3688899988 999998887421 1111111 11234688999999986 4666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.++..+.+++... .+ -.++|++||..++....
T Consensus 75 ~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~--- 151 (251)
T PRK12481 75 SQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI--- 151 (251)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC---
Confidence 3 58999999997421 1345668899999988888876532 12 35899999976643210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
. ...|+.||.+.+.+.+..+. +|+++..++||.+-.+...
T Consensus 152 ------~-----------------------------~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~- 195 (251)
T PRK12481 152 ------R-----------------------------VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTA- 195 (251)
T ss_pred ------C-----------------------------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchh-
Confidence 0 16899999999998877654 5899999999987432110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+............. .+ ...+...+|++.++..++...... ..+.++.+.++
T Consensus 196 ------~~~~~~~~~~~~~~~----~p-----~~~~~~peeva~~~~~L~s~~~~~--~~G~~i~vdgg 247 (251)
T PRK12481 196 ------ALRADTARNEAILER----IP-----ASRWGTPDDLAGPAIFLSSSASDY--VTGYTLAVDGG 247 (251)
T ss_pred ------hcccChHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhCccccC--cCCceEEECCC
Confidence 010001111111111 11 113577899999999988643321 13566666554
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.7e-09 Score=94.24 Aligned_cols=148 Identities=10% Similarity=-0.023 Sum_probs=103.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|+.. ..+.+... ....+++++.+|+++. +++.+++
T Consensus 15 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~----------------~~~~~~~~~~~D~~~~------~~v~~~~ 67 (260)
T PRK08267 15 RATALLFAAE--GWRVGAYDINEA---GLAALAAE----------------LGAGNAWTGALDVTDR------AAWDAAL 67 (260)
T ss_pred HHHHHHHHHC--CCeEEEEeCCHH---HHHHHHHH----------------hcCCceEEEEecCCCH------HHHHHHH
Confidence 3688899988 899999998532 11111110 0124788999999876 4555443
Q ss_pred c--------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E--------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~--------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.++.++++++... .+..++|++||..+.....
T Consensus 68 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--- 144 (260)
T PRK08267 68 ADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP--- 144 (260)
T ss_pred HHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC---
Confidence 3 57999999997421 1345678999999999998887531 2456899999965432210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
....|+.||.+.+.+...... .++++++++|+.+-.
T Consensus 145 -----------------------------------~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t 184 (260)
T PRK08267 145 -----------------------------------GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDT 184 (260)
T ss_pred -----------------------------------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCC
Confidence 017899999999988887754 579999999997744
|
|
| >KOG4288|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.5e-09 Score=87.90 Aligned_cols=211 Identities=15% Similarity=0.101 Sum_probs=138.6
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.-+.. ++.|..+.|++... .. ..+...+.++.||.-..+ -+.....
T Consensus 67 ~vlk~A~~v--v~svgilsen~~k~-~l---------------------~sw~~~vswh~gnsfssn------~~k~~l~ 116 (283)
T KOG4288|consen 67 EVLKNATNV--VHSVGILSENENKQ-TL---------------------SSWPTYVSWHRGNSFSSN------PNKLKLS 116 (283)
T ss_pred HHHHHHHhh--ceeeeEeecccCcc-hh---------------------hCCCcccchhhccccccC------cchhhhc
Confidence 466666666 67899999975522 11 445678899999975442 2555567
Q ss_pred CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHhh
Q psy7539 82 TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAEL 161 (318)
Q Consensus 82 ~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~ 161 (318)
++..++-+++-.. ....+.+.|-....+-.++|.+. ++++|+|+|-...... |.
T Consensus 117 g~t~v~e~~ggfg---n~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~d~~~~-----------~~----------- 170 (283)
T KOG4288|consen 117 GPTFVYEMMGGFG---NIILMDRINGTANINAVKAAAKA-GVPRFVYISAHDFGLP-----------PL----------- 170 (283)
T ss_pred CCcccHHHhcCcc---chHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhhhcCCC-----------Cc-----------
Confidence 8888888877532 22245566777777778888885 9999999998432111 11
Q ss_pred hcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcC--
Q psy7539 162 LSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG-- 239 (318)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~-- 239 (318)
.+.+|-.+|.++|.-+.... +++-+++|||++||... ..|....+.-....+.....+
T Consensus 171 ----------------i~rGY~~gKR~AE~Ell~~~--~~rgiilRPGFiyg~R~--v~g~~~pL~~vg~pl~~~~~~a~ 230 (283)
T KOG4288|consen 171 ----------------IPRGYIEGKREAEAELLKKF--RFRGIILRPGFIYGTRN--VGGIKSPLHTVGEPLEMVLKFAL 230 (283)
T ss_pred ----------------cchhhhccchHHHHHHHHhc--CCCceeeccceeecccc--cCcccccHHhhhhhHHHHHHhhh
Confidence 12789999999998887665 47789999999999732 221111111111222222222
Q ss_pred -ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHH
Q psy7539 240 -IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKD 303 (318)
Q Consensus 240 -~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~ 303 (318)
....++.-+....+.|.+++||.+.+.++..+.- - + .+++.++.++..+
T Consensus 231 k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f---------~---G---vv~i~eI~~~a~k 280 (283)
T KOG4288|consen 231 KPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDF---------K---G---VVTIEEIKKAAHK 280 (283)
T ss_pred chhhcCcccccccCCCcCHHHHHHHHHHhccCCCc---------C---c---eeeHHHHHHHHHH
Confidence 2234566678889999999999999999877542 1 2 5777887766544
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.4e-09 Score=90.74 Aligned_cols=184 Identities=13% Similarity=0.121 Sum_probs=119.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
+++++|+++ |++|+++.|+... .+.+...+ ....+++++.+|++++ +++..++
T Consensus 20 ~ia~~l~~~--G~~V~~~~r~~~~---~~~~~~~~---------------~~~~~~~~~~~D~~d~------~~~~~~~~ 73 (263)
T PRK09072 20 ALAEALAAA--GARLLLVGRNAEK---LEALAARL---------------PYPGRHRWVVADLTSE------AGREAVLA 73 (263)
T ss_pred HHHHHHHHC--CCEEEEEECCHHH---HHHHHHHH---------------hcCCceEEEEccCCCH------HHHHHHHH
Confidence 678899888 9999999996321 11111110 0124788999999986 4555443
Q ss_pred -----cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccccc
Q psy7539 81 -----ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 -----~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
..+|+|||+||.... ...+...+++|+.|+.++++++... .+..++|++||..+....
T Consensus 74 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------- 146 (263)
T PRK09072 74 RAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY------- 146 (263)
T ss_pred HHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC-------
Confidence 368999999997532 1234568889999999999887542 234578999886543210
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
+ ....|+.+|.+.+.++..... .++.++++.||.+......
T Consensus 147 ---~----------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~---- 191 (263)
T PRK09072 147 ---P----------------------------GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS---- 191 (263)
T ss_pred ---C----------------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh----
Confidence 0 016899999998888777654 4788899999866332100
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
.. ... . .......+..++|+|++++.++++..
T Consensus 192 ---------~~-----~~~---~--~~~~~~~~~~~~~va~~i~~~~~~~~ 223 (263)
T PRK09072 192 ---------EA-----VQA---L--NRALGNAMDDPEDVAAAVLQAIEKER 223 (263)
T ss_pred ---------hh-----ccc---c--cccccCCCCCHHHHHHHHHHHHhCCC
Confidence 00 000 0 00011246788999999999998754
|
|
| >KOG3019|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.4e-09 Score=89.23 Aligned_cols=175 Identities=13% Similarity=-0.040 Sum_probs=114.7
Q ss_pred CccEEEEccccc------Ccchh-HHHHHHHhHHHHHHHHHHHHhcCCC-ccEEEEeccccccCC--cccccccCCCCCC
Q psy7539 82 TIHIVYHIAATV------RFDDY-MQTYVFLNTRGTRDMLNLSKQMIHL-QLFVYVSTAYCHPKE--KVLEEKTYPPPVS 151 (318)
Q Consensus 82 ~~d~Vih~Aa~~------~~~~~-~~~~~~~Nv~gt~~ll~~a~~~~~~-~~~v~~SS~~~~~~~--~~~~E~~~~~p~~ 151 (318)
.|+..+++++.. .+... .++.+...+..|..|.++....+.. +.+|.+|..++|-.. ...+|+....--
T Consensus 73 sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgf- 151 (315)
T KOG3019|consen 73 SCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGF- 151 (315)
T ss_pred ehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCCh-
Confidence 456666666652 22222 2345555566788899998877655 589999998877652 244554322211
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhH--HHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCch
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAY--TKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGP 229 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~ 229 (318)
+.... .||.+ ...... ...+.+++|.|.|.|... +..+.
T Consensus 152 ----------------------------d~~srL~l~WE~--aA~~~~-~~~r~~~iR~GvVlG~gG--------Ga~~~ 192 (315)
T KOG3019|consen 152 ----------------------------DILSRLCLEWEG--AALKAN-KDVRVALIRIGVVLGKGG--------GALAM 192 (315)
T ss_pred ----------------------------HHHHHHHHHHHH--HhhccC-cceeEEEEEEeEEEecCC--------cchhh
Confidence 11111 12222 222222 368999999999999653 22232
Q ss_pred HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 230 TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
..+...+..|.+ .++|.|.++|+|++|++..+-.+++++.. .++.|-+.+ ++.+..|+.+.+...++
T Consensus 193 M~lpF~~g~GGP---lGsG~Q~fpWIHv~DL~~li~~ale~~~v-----~GViNgvAP--~~~~n~Ef~q~lg~aL~ 259 (315)
T KOG3019|consen 193 MILPFQMGAGGP---LGSGQQWFPWIHVDDLVNLIYEALENPSV-----KGVINGVAP--NPVRNGEFCQQLGSALS 259 (315)
T ss_pred hhhhhhhccCCc---CCCCCeeeeeeehHHHHHHHHHHHhcCCC-----CceecccCC--CccchHHHHHHHHHHhC
Confidence 233333334322 37899999999999999999999999776 679999999 89999999999998873
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.6e-10 Score=95.39 Aligned_cols=143 Identities=15% Similarity=0.113 Sum_probs=100.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... +. .....++.++.+|+++. +++..++
T Consensus 15 ~~ia~~l~~~--G~~v~~~~r~~~~~-----~~-----------------~~~~~~~~~~~~D~~~~------~~~~~~~ 64 (243)
T PRK07023 15 AALAEQLLQP--GIAVLGVARSRHPS-----LA-----------------AAAGERLAEVELDLSDA------AAAAAWL 64 (243)
T ss_pred HHHHHHHHhC--CCEEEEEecCcchh-----hh-----------------hccCCeEEEEEeccCCH------HHHHHHH
Confidence 3678899888 99999999964321 10 11234788899999986 4555422
Q ss_pred c-----------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCC
Q psy7539 81 E-----------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKE 138 (318)
Q Consensus 81 ~-----------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~ 138 (318)
+ .+|++||+||.... .+.+...+++|+.|+..+.+.+.+. .+..++|++||..++...
T Consensus 65 ~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~ 144 (243)
T PRK07023 65 AGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY 144 (243)
T ss_pred HHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC
Confidence 1 57899999997432 1234567889999977766655432 245689999997654321
Q ss_pred cccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEeccccc
Q psy7539 139 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSII 211 (318)
Q Consensus 139 ~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v 211 (318)
.+ ...|+.+|...|.++..+.. .++++.+++||.+
T Consensus 145 ---------~~-----------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~ 182 (243)
T PRK07023 145 ---------AG-----------------------------WSVYCATKAALDHHARAVALDANRALRIVSLAPGVV 182 (243)
T ss_pred ---------CC-----------------------------chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcc
Confidence 01 17899999999999987764 5899999999966
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.3e-09 Score=90.92 Aligned_cols=184 Identities=13% Similarity=0.051 Sum_probs=115.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH--
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML-- 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~-- 79 (318)
+++++|++. |++|+++.|+... .+++.+.+. .....++.++.+|++..+ .+++..+
T Consensus 27 ~la~~l~~~--G~~Vi~~~r~~~~---~~~~~~~l~-------------~~~~~~~~~~~~d~~~~~----~~~~~~~~~ 84 (247)
T PRK08945 27 EAALTYARH--GATVILLGRTEEK---LEAVYDEIE-------------AAGGPQPAIIPLDLLTAT----PQNYQQLAD 84 (247)
T ss_pred HHHHHHHHC--CCcEEEEeCCHHH---HHHHHHHHH-------------hcCCCCceEEEecccCCC----HHHHHHHHH
Confidence 578899987 8999999996321 122221111 111246778888886421 1233332
Q ss_pred -----hcCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 80 -----SETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 80 -----~~~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
...+|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||.......
T Consensus 85 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~----- 159 (247)
T PRK08945 85 TIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR----- 159 (247)
T ss_pred HHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC-----
Confidence 2368999999987422 1334568999999988888876421 256789999996543210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
+ ....|+.||.+.|.++..+.. .++++++++|+.+......
T Consensus 160 -----~----------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~-- 204 (247)
T PRK08945 160 -----A----------------------------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA-- 204 (247)
T ss_pred -----C----------------------------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh--
Confidence 0 016899999999999887755 4688889999866332100
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
..+ .. .....+...+|++..+..++...
T Consensus 205 -----~~~--------------~~-----~~~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 205 -----SAF--------------PG-----EDPQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred -----hhc--------------Cc-----ccccCCCCHHHHHHHHHHHhCcc
Confidence 000 00 01124677899999999987543
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=9e-09 Score=88.40 Aligned_cols=187 Identities=17% Similarity=0.139 Sum_probs=123.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
.++++|.++ |++|+.++|++ +||.++.+ .+. ....-+++++..|++++ +.+..+.+
T Consensus 21 ~~A~~lA~~--g~~liLvaR~~------~kL~~la~-----~l~-----~~~~v~v~vi~~DLs~~------~~~~~l~~ 76 (265)
T COG0300 21 ELAKQLARR--GYNLILVARRE------DKLEALAK-----ELE-----DKTGVEVEVIPADLSDP------EALERLED 76 (265)
T ss_pred HHHHHHHHC--CCEEEEEeCcH------HHHHHHHH-----HHH-----HhhCceEEEEECcCCCh------hHHHHHHH
Confidence 578889988 99999999963 33433321 010 12234678999999998 45665543
Q ss_pred -------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
.+|++||+||...+. ....+.+++|+.++..|-.+.... .+--.+|.++|..++.+.
T Consensus 77 ~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~------ 150 (265)
T COG0300 77 ELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT------ 150 (265)
T ss_pred HHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC------
Confidence 599999999985322 334568999999877777665431 134579999998875431
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
|. ...|+.||...-.+-..... .|+.++.+.||-+.-..
T Consensus 151 ----p~----------------------------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f----- 193 (265)
T COG0300 151 ----PY----------------------------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEF----- 193 (265)
T ss_pred ----cc----------------------------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccc-----
Confidence 11 17899999977655554433 68999999999663311
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
.. ..+. . ........-++..+|+|+..+.++.+..
T Consensus 194 ------~~--------~~~~-~--~~~~~~~~~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 194 ------FD--------AKGS-D--VYLLSPGELVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred ------cc--------cccc-c--cccccchhhccCHHHHHHHHHHHHhcCC
Confidence 10 0000 0 0011225578899999999999998854
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.8e-09 Score=89.78 Aligned_cols=202 Identities=10% Similarity=0.012 Sum_probs=122.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... .+.+. ... ...++.+|+++. +++..++
T Consensus 21 ~~~a~~l~~~--G~~v~~~~r~~~~---~~~~~-----------------~~~--~~~~~~~D~~~~------~~~~~~~ 70 (255)
T PRK06057 21 LATARRLAAE--GATVVVGDIDPEA---GKAAA-----------------DEV--GGLFVPTDVTDE------DAVNALF 70 (255)
T ss_pred HHHHHHHHHc--CCEEEEEeCCHHH---HHHHH-----------------HHc--CCcEEEeeCCCH------HHHHHHH
Confidence 3688899988 8999999885321 11111 000 125788999876 4566555
Q ss_pred c-------CccEEEEcccccCcc---------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEecccc-ccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRFD---------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYC-HPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~---------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~-~~~~~~ 140 (318)
+ ++|+|||+||..... ..+...+++|+.|+..+++.+... .+..++|++||..+ ++..
T Consensus 71 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~-- 148 (255)
T PRK06057 71 DTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA-- 148 (255)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC--
Confidence 4 579999999864211 224568889999988877765421 24458999998643 2210
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
.+ ...|+.+|.+.+.+...... +|++++++|||.+.++..
T Consensus 149 -------~~-----------------------------~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~ 192 (255)
T PRK06057 149 -------TS-----------------------------QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLL 192 (255)
T ss_pred -------CC-----------------------------CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchh
Confidence 00 16799999877777665433 589999999998866432
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... +. ..+........ ..+ ...+..++|+++++..++...... ..+..+.+.++
T Consensus 193 ~~~--~~---~~~~~~~~~~~-----~~~-----~~~~~~~~~~a~~~~~l~~~~~~~--~~g~~~~~~~g 246 (255)
T PRK06057 193 QEL--FA---KDPERAARRLV-----HVP-----MGRFAEPEEIAAAVAFLASDDASF--ITASTFLVDGG 246 (255)
T ss_pred hhh--cc---CCHHHHHHHHh-----cCC-----CCCCcCHHHHHHHHHHHhCccccC--ccCcEEEECCC
Confidence 110 00 01111111110 111 125789999999988877653321 23667777654
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.8e-09 Score=92.32 Aligned_cols=193 Identities=12% Similarity=0.015 Sum_probs=121.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
++++.|+++ |++|+++.|+.. ++.+..+ .+ . ...++..+.+|++++ +++..++
T Consensus 24 ~ia~~l~~~--G~~V~~~~r~~~------~l~~~~~-----~l------~-~~~~~~~~~~Dv~d~------~~v~~~~~ 77 (296)
T PRK05872 24 ELARRLHAR--GAKLALVDLEEA------ELAALAA-----EL------G-GDDRVLTVVADVTDL------AAMQAAAE 77 (296)
T ss_pred HHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----Hh------c-CCCcEEEEEecCCCH------HHHHHHHH
Confidence 578888887 899999998532 2222111 00 1 123566677999986 4555443
Q ss_pred ------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCccccccc
Q psy7539 81 ------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
..+|+|||+||.... ...++..+++|+.|+.++++++... ....+||++||..++...
T Consensus 78 ~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------- 150 (296)
T PRK05872 78 EAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA------- 150 (296)
T ss_pred HHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC-------
Confidence 368999999997421 1334568999999999999987642 123579999997664321
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
| ....|+.||...+.+...... .|+.+.++.||.+..+...
T Consensus 151 ---~----------------------------~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~---- 195 (296)
T PRK05872 151 ---P----------------------------GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVR---- 195 (296)
T ss_pred ---C----------------------------CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhh----
Confidence 0 017899999999999877653 5899999999977543211
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
...........+.... +.....++..+|++++++.++....
T Consensus 196 ---~~~~~~~~~~~~~~~~-------~~p~~~~~~~~~va~~i~~~~~~~~ 236 (296)
T PRK05872 196 ---DADADLPAFRELRARL-------PWPLRRTTSVEKCAAAFVDGIERRA 236 (296)
T ss_pred ---hccccchhHHHHHhhC-------CCcccCCCCHHHHHHHHHHHHhcCC
Confidence 1000001111111110 0112256789999999999987643
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.6e-09 Score=103.04 Aligned_cols=181 Identities=10% Similarity=0.051 Sum_probs=121.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.+. ..+...+. .....++.++.+|++++ +++..++
T Consensus 385 ~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~---------------~~~~~~~~~~~~Dv~~~------~~~~~~~ 439 (657)
T PRK07201 385 RATAIKVAEA--GATVFLVARNGEA--LDELVAEI---------------RAKGGTAHAYTCDLTDS------AAVDHTV 439 (657)
T ss_pred HHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHH---------------HhcCCcEEEEEecCCCH------HHHHHHH
Confidence 3688999988 8999999995321 11111111 11134788999999986 4666555
Q ss_pred c-------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|+|||+||.... ...+...+++|+.|+.+++.++... .+..+||++||.+++...
T Consensus 440 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 516 (657)
T PRK07201 440 KDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA--- 516 (657)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC---
Confidence 4 68999999996311 1245578899999988887765321 245689999998765421
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
|. ...|+.||.+.+.+...+.. .|+.+++++||.+..+...
T Consensus 517 -------~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~ 561 (657)
T PRK07201 517 -------PR----------------------------FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIA 561 (657)
T ss_pred -------CC----------------------------cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccC
Confidence 00 17899999999999887654 5899999999977542211
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
+. .. .....+...+++|+.++.++.+.
T Consensus 562 ~~----------------------~~-----~~~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 562 PT----------------------KR-----YNNVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred cc----------------------cc-----ccCCCCCCHHHHHHHHHHHHHhC
Confidence 00 00 01123578899999999887653
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.8e-09 Score=99.58 Aligned_cols=202 Identities=9% Similarity=0.093 Sum_probs=130.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+.. ..+.+. .....++..+.+|++++ +++..+++
T Consensus 284 ~~a~~l~~~--G~~V~~~~r~~~---~~~~~~-----------------~~~~~~~~~~~~D~~~~------~~~~~~~~ 335 (520)
T PRK06484 284 AVADRFAAA--GDRLLIIDRDAE---GAKKLA-----------------EALGDEHLSVQADITDE------AAVESAFA 335 (520)
T ss_pred HHHHHHHHC--CCEEEEEeCCHH---HHHHHH-----------------HHhCCceeEEEccCCCH------HHHHHHHH
Confidence 688999988 899999998532 111221 11123567789999987 45555443
Q ss_pred -------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 82 -------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
.+|++||+||.... ...++..+++|+.|+.++.+++... .+..+||++||.++....
T Consensus 336 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------- 408 (520)
T PRK06484 336 QIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL------- 408 (520)
T ss_pred HHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC-------
Confidence 58999999997421 1234568999999999999987753 223589999997664321
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
++ ...|+.+|...+.+.+..+. +|+++..+.||.+..+...
T Consensus 409 --~~-----------------------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~---- 453 (520)
T PRK06484 409 --PP-----------------------------RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVL---- 453 (520)
T ss_pred --CC-----------------------------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhh----
Confidence 01 17899999999999888765 4799999999988553211
Q ss_pred cccCCCchHH-HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTG-LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....... ....+.+. .+ ..-+...+|+|++++.++...... ..+..+.+.++
T Consensus 454 ---~~~~~~~~~~~~~~~~----~~-----~~~~~~~~dia~~~~~l~s~~~~~--~~G~~i~vdgg 506 (520)
T PRK06484 454 ---ALKASGRADFDSIRRR----IP-----LGRLGDPEEVAEAIAFLASPAASY--VNGATLTVDGG 506 (520)
T ss_pred ---hhccccHHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhCccccC--ccCcEEEECCC
Confidence 0000000 11111111 00 113567899999999988654321 24677777665
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.6e-09 Score=92.10 Aligned_cols=219 Identities=12% Similarity=0.038 Sum_probs=133.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |.+|++..|.... ..+.+.+.+ .....++.++.+|++++ +.+..++
T Consensus 26 ~~ia~~L~~~--Ga~Vv~~~~~~~~--~~~~~~~~i--------------~~~g~~~~~~~~Dv~d~------~~~~~~~ 81 (306)
T PRK07792 26 RAEALGLARL--GATVVVNDVASAL--DASDVLDEI--------------RAAGAKAVAVAGDISQR------ATADELV 81 (306)
T ss_pred HHHHHHHHHC--CCEEEEecCCchh--HHHHHHHHH--------------HhcCCeEEEEeCCCCCH------HHHHHHH
Confidence 3688999988 8999888875321 111111111 11134788899999986 4555554
Q ss_pred c------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CC--------CccEEEEeccccccC
Q psy7539 81 E------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IH--------LQLFVYVSTAYCHPK 137 (318)
Q Consensus 81 ~------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~--------~~~~v~~SS~~~~~~ 137 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .. -.++|++||..+...
T Consensus 82 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 161 (306)
T PRK07792 82 ATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG 161 (306)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC
Confidence 3 68999999997532 1345568899999999999887531 00 137999999765322
Q ss_pred CcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 138 EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 138 ~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
. + ....|+.+|.+.+.+.+.+.. +|+++.++.|+. .
T Consensus 162 ~----------~----------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~ 201 (306)
T PRK07792 162 P----------V----------------------------GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA--R 201 (306)
T ss_pred C----------C----------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--C
Confidence 0 0 016799999999999877654 578999999972 1
Q ss_pred ccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCC-----
Q psy7539 214 IWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANK----- 288 (318)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~----- 288 (318)
+... ..... .. ... ........+.+|++.++..++...... ..+.+|.+.++.
T Consensus 202 ---t~~~---~~~~~----------~~-~~~---~~~~~~~~~pe~va~~v~~L~s~~~~~--~tG~~~~v~gg~~~~~~ 259 (306)
T PRK07792 202 ---TAMT---ADVFG----------DA-PDV---EAGGIDPLSPEHVVPLVQFLASPAAAE--VNGQVFIVYGPMVTLVA 259 (306)
T ss_pred ---Cchh---hhhcc----------cc-chh---hhhccCCCCHHHHHHHHHHHcCccccC--CCCCEEEEcCCeEEEEe
Confidence 0000 00000 00 000 001223457899999988877543211 124555553220
Q ss_pred -----------CCceeHHHHHHHHHHhh
Q psy7539 289 -----------DFQITWYDIIENGKDIA 305 (318)
Q Consensus 289 -----------~~~~~~~el~~~i~~~~ 305 (318)
..+++..++.+.+.+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (306)
T PRK07792 260 APVVERRFDADGDAWDPGELSATLRDYF 287 (306)
T ss_pred eeeecceecCCCCCCCHHHHHHHHHHHh
Confidence 14578888888888774
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.3e-09 Score=93.11 Aligned_cols=204 Identities=11% Similarity=-0.034 Sum_probs=127.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+... .+.+...+ .....+++++.+|++++ +++..++
T Consensus 23 ~~~a~~l~~~--G~~Vi~~~r~~~~---~~~~~~~l--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 77 (258)
T PRK06949 23 ARFAQVLAQA--GAKVVLASRRVER---LKELRAEI--------------EAEGGAAHVVSLDVTDY------QSIKAAV 77 (258)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCcEEEEEecCCCH------HHHHHHH
Confidence 3688889887 8999999996321 11121111 11124688999999876 4566554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC--------CccEEEEeccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH--------LQLFVYVSTAYCH 135 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~--------~~~~v~~SS~~~~ 135 (318)
+ .+|+|||+||.... ...++..+++|+.++..+++++... .. ..++|++||..+.
T Consensus 78 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 157 (258)
T PRK06949 78 AHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL 157 (258)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc
Confidence 4 58999999996321 1335567889999999998877521 11 2489999997654
Q ss_pred cCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 136 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
... .+ ...|+.+|.+.+.++..+.. .++++++++||.+
T Consensus 158 ~~~---------~~-----------------------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v 199 (258)
T PRK06949 158 RVL---------PQ-----------------------------IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYI 199 (258)
T ss_pred CCC---------CC-----------------------------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCC
Confidence 221 00 17899999999999887755 5899999999999
Q ss_pred ccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC
Q psy7539 212 IPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 286 (318)
Q Consensus 212 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~ 286 (318)
.++.... .... ... ...... .+ ...+...+|++..+..++...... ..+....+.+
T Consensus 200 ~t~~~~~-------~~~~-~~~-~~~~~~---~~-----~~~~~~p~~~~~~~~~l~~~~~~~--~~G~~i~~dg 255 (258)
T PRK06949 200 DTEINHH-------HWET-EQG-QKLVSM---LP-----RKRVGKPEDLDGLLLLLAADESQF--INGAIISADD 255 (258)
T ss_pred cCCcchh-------ccCh-HHH-HHHHhc---CC-----CCCCcCHHHHHHHHHHHhChhhcC--CCCcEEEeCC
Confidence 7643211 1111 111 111111 01 124555799999999987643321 1255555443
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.1e-09 Score=85.59 Aligned_cols=148 Identities=16% Similarity=0.205 Sum_probs=102.3
Q ss_pred hhHHHHHhhCCCc-EEEEEEccCCCCCHHHH-HHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 2 VLLEKILRTCENV-KIYILLRPKKNKNSRER-LEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~r-l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
+++++|+++ +. .|+++.|+......... +... .....++.++.+|++++ +.+..+
T Consensus 15 ~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~D~~~~------~~~~~~ 71 (180)
T smart00822 15 ELARWLAER--GARHLVLLSRSGPDAPGAAELLAEL---------------EALGAEVTVVACDVADR------AALAAA 71 (180)
T ss_pred HHHHHHHHh--hCCeEEEEeCCCCCCccHHHHHHHH---------------HhcCCeEEEEECCCCCH------HHHHHH
Confidence 678889887 76 78888886543322111 1111 11224678899999875 455554
Q ss_pred hc-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCccccccc
Q psy7539 80 SE-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
++ .+|.|||+||..... ..+...+++|+.++.++++++.+. +.+++|++||..+....
T Consensus 72 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~ss~~~~~~~------- 143 (180)
T smart00822 72 LAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFSSVAGVLGN------- 143 (180)
T ss_pred HHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEccHHHhcCC-------
Confidence 33 469999999964211 234567899999999999999874 77899999996553210
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEeccccc
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSII 211 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v 211 (318)
+ ....|+.+|...+.++......+++++.+.||.+
T Consensus 144 ---~----------------------------~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 144 ---P----------------------------GQANYAAANAFLDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred ---C----------------------------CchhhHHHHHHHHHHHHHHHhcCCceEEEeeccc
Confidence 0 0178999999999999665557899999998854
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.5e-08 Score=88.97 Aligned_cols=195 Identities=10% Similarity=0.032 Sum_probs=117.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+.+ ..+.+.+.+. ......+.++.+|++++ +++..+.+
T Consensus 15 ~la~~la~~--G~~vv~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~~~D~~~~------~~~~~~~~ 70 (272)
T PRK07832 15 ATALRLAAQ--GAELFLTDRDAD---GLAQTVADAR-------------ALGGTVPEHRALDISDY------DAVAAFAA 70 (272)
T ss_pred HHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHH-------------hcCCCcceEEEeeCCCH------HHHHHHHH
Confidence 678888887 899999988532 1111111100 11112355678999886 44444333
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
++|+|||+||.... ...+...+++|+.|+..+++++... ....+||++||..+...
T Consensus 71 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~------ 144 (272)
T PRK07832 71 DIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA------ 144 (272)
T ss_pred HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC------
Confidence 58999999986421 2334668999999999999987531 12358999999654221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.| +...|+.+|.+.+.+...... +++++++++||.+.++.....
T Consensus 145 ----~~----------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~ 192 (272)
T PRK07832 145 ----LP----------------------------WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTV 192 (272)
T ss_pred ----CC----------------------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcc
Confidence 01 116899999988777655542 689999999998865432110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhh
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN 270 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~ 270 (318)
. ..+.............. .....+..+|+|.+++.++.+
T Consensus 193 ~--~~~~~~~~~~~~~~~~~----------~~~~~~~~~~vA~~~~~~~~~ 231 (272)
T PRK07832 193 E--IAGVDREDPRVQKWVDR----------FRGHAVTPEKAAEKILAGVEK 231 (272)
T ss_pred c--ccccCcchhhHHHHHHh----------cccCCCCHHHHHHHHHHHHhc
Confidence 0 00000000000111000 012357899999999999964
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.5e-08 Score=86.83 Aligned_cols=200 Identities=12% Similarity=0.079 Sum_probs=123.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. ++++++. .. .+++++.+|+++. +.+..++
T Consensus 20 ~~~a~~l~~~--G~~v~~~~~~~~-----~~~~~l~--------------~~--~~~~~~~~D~~~~------~~~~~~~ 70 (237)
T PRK12742 20 AAIVRRFVTD--GANVRFTYAGSK-----DAAERLA--------------QE--TGATAVQTDSADR------DAVIDVV 70 (237)
T ss_pred HHHHHHHHHC--CCEEEEecCCCH-----HHHHHHH--------------HH--hCCeEEecCCCCH------HHHHHHH
Confidence 3678888888 888888766422 1111110 00 1356788999875 3455544
Q ss_pred c---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh-cCCCccEEEEeccccccCCcccccccCCCC
Q psy7539 81 E---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ-MIHLQLFVYVSTAYCHPKEKVLEEKTYPPP 149 (318)
Q Consensus 81 ~---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p 149 (318)
+ ++|++||+||.... ...++..+++|+.|+..++..+.. +....++|++||..+... +..+
T Consensus 71 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------~~~~ 142 (237)
T PRK12742 71 RKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM--------PVAG 142 (237)
T ss_pred HHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC--------CCCC
Confidence 3 58999999997421 123567899999999998766554 223468999999654211 0011
Q ss_pred CChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccC
Q psy7539 150 VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDN 225 (318)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~ 225 (318)
...|+.+|.+.|.+++.+.. .|+.+++++||.+..+... .
T Consensus 143 -----------------------------~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~-------~ 186 (237)
T PRK12742 143 -----------------------------MAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANP-------A 186 (237)
T ss_pred -----------------------------CcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccc-------c
Confidence 17899999999999887654 5799999999977442210 0
Q ss_pred CCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 226 INGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..+ . ........ + ..-+...+|++.++..++...... ..+..+.+.++
T Consensus 187 -~~~--~-~~~~~~~~---~-----~~~~~~p~~~a~~~~~l~s~~~~~--~~G~~~~~dgg 234 (237)
T PRK12742 187 -NGP--M-KDMMHSFM---A-----IKRHGRPEEVAGMVAWLAGPEASF--VTGAMHTIDGA 234 (237)
T ss_pred -ccH--H-HHHHHhcC---C-----CCCCCCHHHHHHHHHHHcCcccCc--ccCCEEEeCCC
Confidence 011 1 11111110 0 113567899999999888654321 23666666544
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.8e-08 Score=86.57 Aligned_cols=208 Identities=10% Similarity=-0.037 Sum_probs=122.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.. +..+.+.+.+. .....++.++.+|++++ +++..++
T Consensus 22 ~~ia~~l~~~--G~~v~~~~~~~~--~~~~~~~~~~~-------------~~~~~~~~~~~~D~~~~------~~~~~~~ 78 (260)
T PRK08416 22 KAIVYEFAQS--GVNIAFTYNSNV--EEANKIAEDLE-------------QKYGIKAKAYPLNILEP------ETYKELF 78 (260)
T ss_pred HHHHHHHHHC--CCEEEEEcCCCH--HHHHHHHHHHH-------------HhcCCceEEEEcCCCCH------HHHHHHH
Confidence 4688999988 999888766422 11111111110 11124788999999986 4555544
Q ss_pred c-------CccEEEEcccccC------c-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccC
Q psy7539 81 E-------TIHIVYHIAATVR------F-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPK 137 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~------~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~ 137 (318)
+ ++|++||+||... + .......+++|+.+...+...+... .+..+||++||......
T Consensus 79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 158 (260)
T PRK08416 79 KKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY 158 (260)
T ss_pred HHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC
Confidence 3 5899999998531 0 1223457777887766655544321 13458999999654221
Q ss_pred CcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 138 EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 138 ~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
. | ....|+.||.+.+.+.+.+.. +|+++..+.||.+-.
T Consensus 159 ~----------~----------------------------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T 200 (260)
T PRK08416 159 I----------E----------------------------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDT 200 (260)
T ss_pred C----------C----------------------------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccC
Confidence 0 0 016899999999999988766 489999999996633
Q ss_pred ccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 214 IWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+... ............... .+ ..-+...+|++.+++.++...... ..+..+.+.++
T Consensus 201 ~~~~-------~~~~~~~~~~~~~~~-------~~--~~r~~~p~~va~~~~~l~~~~~~~--~~G~~i~vdgg 256 (260)
T PRK08416 201 DALK-------AFTNYEEVKAKTEEL-------SP--LNRMGQPEDLAGACLFLCSEKASW--LTGQTIVVDGG 256 (260)
T ss_pred hhhh-------hccCCHHHHHHHHhc-------CC--CCCCCCHHHHHHHHHHHcChhhhc--ccCcEEEEcCC
Confidence 2100 000101111111111 00 113677899999999988654321 13666776554
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.06 E-value=6.2e-09 Score=90.34 Aligned_cols=204 Identities=11% Similarity=0.053 Sum_probs=127.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|... .+...+. .....++.++.+|+++. +++..++
T Consensus 24 ~a~a~~l~~~--G~~vv~~~~~~~----~~~~~~~---------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 76 (253)
T PRK08993 24 QGMALGLAEA--GCDIVGINIVEP----TETIEQV---------------TALGRRFLSLTADLRKI------DGIPALL 76 (253)
T ss_pred HHHHHHHHHC--CCEEEEecCcch----HHHHHHH---------------HhcCCeEEEEECCCCCH------HHHHHHH
Confidence 3678899888 999888766422 1111111 11124678899999876 4565555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...+...+++|+.++.++++++... .+ -.++|++||..++....
T Consensus 77 ~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--- 153 (253)
T PRK08993 77 ERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI--- 153 (253)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC---
Confidence 3 58999999997421 1345678999999999998887542 11 24799999976543210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
....|+.+|.+.+.+.+..+. +|+++..++||.+-.+...
T Consensus 154 -----------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~- 197 (253)
T PRK08993 154 -----------------------------------RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQ- 197 (253)
T ss_pred -----------------------------------CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchh-
Confidence 016899999999988877755 5899999999988442211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+.........+... .+ . .-+...+|+|..++.++...... -.+..+.+.++
T Consensus 198 ------~~~~~~~~~~~~~~~----~p----~-~r~~~p~eva~~~~~l~s~~~~~--~~G~~~~~dgg 249 (253)
T PRK08993 198 ------QLRADEQRSAEILDR----IP----A-GRWGLPSDLMGPVVFLASSASDY--INGYTIAVDGG 249 (253)
T ss_pred ------hhccchHHHHHHHhc----CC----C-CCCcCHHHHHHHHHHHhCccccC--ccCcEEEECCC
Confidence 010001111111111 11 1 12666799999999988754321 13556665443
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.9e-08 Score=86.83 Aligned_cols=209 Identities=8% Similarity=-0.004 Sum_probs=122.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... . .+.+.+.+. .....++.++.+|++++.- + .+.+..++
T Consensus 15 ~~~a~~l~~~--G~~V~~~~~~~~~-~-~~~~~~~l~-------------~~~~~~~~~~~~Dv~d~~~-~-~~~~~~~~ 75 (267)
T TIGR02685 15 SSIAVALHQE--GYRVVLHYHRSAA-A-ASTLAAELN-------------ARRPNSAVTCQADLSNSAT-L-FSRCEAII 75 (267)
T ss_pred HHHHHHHHhC--CCeEEEEcCCcHH-H-HHHHHHHHH-------------hccCCceEEEEccCCCchh-h-HHHHHHHH
Confidence 3689999988 9999988775321 1 111111110 1112356678999998630 0 00112222
Q ss_pred -------cCccEEEEcccccCc------ch------------hHHHHHHHhHHHHHHHHHHHHhcC---------CCccE
Q psy7539 81 -------ETIHIVYHIAATVRF------DD------------YMQTYVFLNTRGTRDMLNLSKQMI---------HLQLF 126 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~------~~------------~~~~~~~~Nv~gt~~ll~~a~~~~---------~~~~~ 126 (318)
.++|+|||+||.... .. .....+++|+.++..+.+++.... +...+
T Consensus 76 ~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~i 155 (267)
T TIGR02685 76 DACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSI 155 (267)
T ss_pred HHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEE
Confidence 368999999996421 11 244678999999999988765321 11257
Q ss_pred EEEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCc
Q psy7539 127 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 202 (318)
Q Consensus 127 v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~ 202 (318)
|++||...... .++ ...|+.||.+.+.+++.... .|++
T Consensus 156 v~~~s~~~~~~---------~~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~ 197 (267)
T TIGR02685 156 VNLCDAMTDQP---------LLG-----------------------------FTMYTMAKHALEGLTRSAALELAPLQIR 197 (267)
T ss_pred EEehhhhccCC---------Ccc-----------------------------cchhHHHHHHHHHHHHHHHHHHhhhCeE
Confidence 77777543211 000 17899999999999988754 5899
Q ss_pred EEEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEE
Q psy7539 203 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 282 (318)
Q Consensus 203 ~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ 282 (318)
+++++||.+..+.. . +......+... .+ ....+...+|++.+++.++...... ..+..+
T Consensus 198 v~~v~PG~~~~~~~---------~--~~~~~~~~~~~----~~----~~~~~~~~~~va~~~~~l~~~~~~~--~~G~~~ 256 (267)
T TIGR02685 198 VNGVAPGLSLLPDA---------M--PFEVQEDYRRK----VP----LGQREASAEQIADVVIFLVSPKAKY--ITGTCI 256 (267)
T ss_pred EEEEecCCccCccc---------c--chhHHHHHHHh----CC----CCcCCCCHHHHHHHHHHHhCcccCC--cccceE
Confidence 99999997753211 0 01111111111 00 0113468899999999988654321 136677
Q ss_pred EeeCC
Q psy7539 283 NLTAN 287 (318)
Q Consensus 283 ni~~~ 287 (318)
.+.++
T Consensus 257 ~v~gg 261 (267)
T TIGR02685 257 KVDGG 261 (267)
T ss_pred EECCc
Confidence 77655
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.6e-09 Score=102.26 Aligned_cols=215 Identities=10% Similarity=0.036 Sum_probs=128.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... .+.+.+.+. . .....++.++.+|++++ +++..++
T Consensus 428 ~aiA~~La~~--Ga~Vvi~~r~~~~---~~~~~~~l~--------~----~~~~~~~~~v~~Dvtd~------~~v~~a~ 484 (676)
T TIGR02632 428 RETARRLAAE--GAHVVLADLNLEA---AEAVAAEIN--------G----QFGAGRAVALKMDVTDE------QAVKAAF 484 (676)
T ss_pred HHHHHHHHhC--CCEEEEEeCCHHH---HHHHHHHHH--------h----hcCCCcEEEEECCCCCH------HHHHHHH
Confidence 3688999988 9999999985321 111211110 0 00123577899999986 5666655
Q ss_pred c-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||..... ..+...+++|+.+...+...+. +.....+||++||..+....
T Consensus 485 ~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~---- 560 (676)
T TIGR02632 485 ADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG---- 560 (676)
T ss_pred HHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC----
Confidence 4 689999999974211 2345678889888776654443 32113479999996543211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc-cccCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII-PIWKD 217 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~-G~~~~ 217 (318)
| ....|+.||.+.+.+++.++. .|+++..++|+.|+ |....
T Consensus 561 ------~----------------------------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~ 606 (676)
T TIGR02632 561 ------K----------------------------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIW 606 (676)
T ss_pred ------C----------------------------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccc
Confidence 0 017899999999999987755 47999999999886 32100
Q ss_pred CCCCcccCC---Cc-hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNI---NG-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..+|.... ++ ...-+... .........+++.+|+|+++..++...... ..+..+++.++
T Consensus 607 -~~~~~~~~~~~~~~~~~~~~~~--------~~~r~~l~r~v~peDVA~av~~L~s~~~~~--~TG~~i~vDGG 669 (676)
T TIGR02632 607 -DGEWREERAAAYGIPADELEEH--------YAKRTLLKRHIFPADIAEAVFFLASSKSEK--TTGCIITVDGG 669 (676)
T ss_pred -cccchhhhhhcccCChHHHHHH--------HHhcCCcCCCcCHHHHHHHHHHHhCCcccC--CcCcEEEECCC
Confidence 00111000 00 00000000 011122345688999999999887643321 13678888776
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.6e-08 Score=84.67 Aligned_cols=206 Identities=13% Similarity=0.019 Sum_probs=123.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|++..|+.. ...+.+.+.+ .....++.++.+|+++. +++..+++
T Consensus 22 ~ia~~l~~~--G~~vvi~~~~~~--~~~~~~~~~l--------------~~~~~~~~~~~~Dl~~~------~~i~~~~~ 77 (261)
T PRK08936 22 AMAVRFGKE--KAKVVINYRSDE--EEANDVAEEI--------------KKAGGEAIAVKGDVTVE------SDVVNLIQ 77 (261)
T ss_pred HHHHHHHHC--CCEEEEEeCCCH--HHHHHHHHHH--------------HHcCCeEEEEEecCCCH------HHHHHHHH
Confidence 678889988 898888878432 1112222111 11124678899999986 45555443
Q ss_pred -------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHH----HHHHhcCCCccEEEEeccccccCCccccc
Q psy7539 82 -------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDML----NLSKQMIHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll----~~a~~~~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
.+|++||+||..... ..+...+++|+.++..+. +.+.+...-.++|++||......
T Consensus 78 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~------ 151 (261)
T PRK08936 78 TAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP------ 151 (261)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC------
Confidence 589999999974221 234457889988776544 44454222358999999654221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.++ ...|+.+|.+.+.+.+.... +|+++++++||.+..+....
T Consensus 152 ---~~~-----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~- 198 (261)
T PRK08936 152 ---WPL-----------------------------FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAE- 198 (261)
T ss_pred ---CCC-----------------------------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccc-
Confidence 011 17899999888887776654 58999999999886542110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+..+. ........ . ....+...+|++..+..++...... ..+..+.+.++
T Consensus 199 -----~~~~~~-~~~~~~~~-~--------~~~~~~~~~~va~~~~~l~s~~~~~--~~G~~i~~d~g 249 (261)
T PRK08936 199 -----KFADPK-QRADVESM-I--------PMGYIGKPEEIAAVAAWLASSEASY--VTGITLFADGG 249 (261)
T ss_pred -----ccCCHH-HHHHHHhc-C--------CCCCCcCHHHHHHHHHHHcCcccCC--ccCcEEEECCC
Confidence 111111 11111111 0 1124667899999999988754321 13555665544
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.5e-09 Score=91.85 Aligned_cols=139 Identities=14% Similarity=0.096 Sum_probs=101.3
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+..... ..++.++.+|++++ +++..+++
T Consensus 24 ~la~~l~~~--G~~v~~~~~~~~~~~--------------------------~~~~~~~~~D~~~~------~~~~~~~~ 69 (266)
T PRK06171 24 AIVKELLAN--GANVVNADIHGGDGQ--------------------------HENYQFVPTDVSSA------EEVNHTVA 69 (266)
T ss_pred HHHHHHHHC--CCEEEEEeCCccccc--------------------------cCceEEEEccCCCH------HHHHHHHH
Confidence 678889888 999999988643221 13677899999986 45555443
Q ss_pred -------CccEEEEcccccCc----------------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccc
Q psy7539 82 -------TIHIVYHIAATVRF----------------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCH 135 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~----------------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~ 135 (318)
.+|+|||+||.... ...++..+++|+.++..+++++... .+..+||++||..+.
T Consensus 70 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 149 (266)
T PRK06171 70 EIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL 149 (266)
T ss_pred HHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc
Confidence 57999999996321 1234568899999999999888742 123479999997654
Q ss_pred cCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 136 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
... . ....|+.+|.+.+.+++.+.. +|+++.+++||.+
T Consensus 150 ~~~---------~-----------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~ 191 (266)
T PRK06171 150 EGS---------E-----------------------------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGIL 191 (266)
T ss_pred CCC---------C-----------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccc
Confidence 321 0 017899999999999887765 5899999999977
Q ss_pred c
Q psy7539 212 I 212 (318)
Q Consensus 212 ~ 212 (318)
-
T Consensus 192 ~ 192 (266)
T PRK06171 192 E 192 (266)
T ss_pred c
Confidence 3
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.9e-08 Score=86.28 Aligned_cols=195 Identities=9% Similarity=0.007 Sum_probs=122.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+.+. ..+++++.+|++++ +++..++
T Consensus 16 ~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~--------------------~~~~~~~~~D~~~~------~~~~~~~ 65 (236)
T PRK06483 16 LALAWHLLAQ--GQPVIVSYRTHYP--AIDGLR--------------------QAGAQCIQADFSTN------AGIMAFI 65 (236)
T ss_pred HHHHHHHHHC--CCeEEEEeCCchh--HHHHHH--------------------HcCCEEEEcCCCCH------HHHHHHH
Confidence 3678889888 9999999996432 111111 11367889999886 3554433
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC--CccEEEEeccccccCCccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH--LQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~--~~~~v~~SS~~~~~~~~~~ 141 (318)
.++|++||+||.... ....+..+++|+.++..+...+... .+ ..++|++||......
T Consensus 66 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~---- 141 (236)
T PRK06483 66 DELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG---- 141 (236)
T ss_pred HHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC----
Confidence 258999999996321 2335568889999988776665542 12 357999998654211
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~ 218 (318)
.| ....|+.||.+.|.+++.++. .++++..++||.+.....
T Consensus 142 ------~~----------------------------~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~-- 185 (236)
T PRK06483 142 ------SD----------------------------KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEG-- 185 (236)
T ss_pred ------CC----------------------------CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCC--
Confidence 00 017899999999999988876 358999999997732110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
............. . .. -+...+|++.++..++..... .+.++.+.++
T Consensus 186 ---------~~~~~~~~~~~~~--~------~~-~~~~~~~va~~~~~l~~~~~~----~G~~i~vdgg 232 (236)
T PRK06483 186 ---------DDAAYRQKALAKS--L------LK-IEPGEEEIIDLVDYLLTSCYV----TGRSLPVDGG 232 (236)
T ss_pred ---------CCHHHHHHHhccC--c------cc-cCCCHHHHHHHHHHHhcCCCc----CCcEEEeCcc
Confidence 0111111111110 0 01 134579999999998864332 4677777665
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.2e-09 Score=104.11 Aligned_cols=150 Identities=15% Similarity=0.059 Sum_probs=104.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.+ ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 329 ~~~a~~l~~~--G~~v~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~~~~~~ 383 (582)
T PRK05855 329 RETALAFARE--GAEVVASDIDEA---AAERTAELI--------------RAAGAVAHAYRVDVSDA------DAMEAFA 383 (582)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCeEEEEEcCCCCH------HHHHHHH
Confidence 3688999988 999999999532 112222111 11123688999999987 4665555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... ...+...+++|+.|+.++.+++... .+ ..+||++||..++....
T Consensus 384 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--- 460 (582)
T PRK05855 384 EWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR--- 460 (582)
T ss_pred HHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC---
Confidence 4 48999999998532 2345568889999999988876431 12 24899999987754311
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
. ...|+.||.+.+.+...... +|+.+++++||.|-.
T Consensus 461 ------~-----------------------------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 461 ------S-----------------------------LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDT 500 (582)
T ss_pred ------C-----------------------------CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcc
Confidence 1 17899999999988877654 589999999997743
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.2e-09 Score=91.16 Aligned_cols=232 Identities=14% Similarity=0.024 Sum_probs=129.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|. + |.+|+++.|+... .+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 15 ~~la~~l~-~--G~~Vv~~~r~~~~---~~~~~~~l--------------~~~~~~~~~~~~Dv~d~------~~i~~~~ 68 (275)
T PRK06940 15 QAIARRVG-A--GKKVLLADYNEEN---LEAAAKTL--------------REAGFDVSTQEVDVSSR------ESVKALA 68 (275)
T ss_pred HHHHHHHh-C--CCEEEEEeCCHHH---HHHHHHHH--------------HhcCCeEEEEEeecCCH------HHHHHHH
Confidence 36788884 6 8999999985321 11111111 11123688899999986 4555554
Q ss_pred c------CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCC-CCCCh
Q psy7539 81 E------TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYP-PPVSP 152 (318)
Q Consensus 81 ~------~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~-~p~~~ 152 (318)
+ .+|+|||+||.......+...+++|+.|+.++++++... ..-.++|++||..+........+.... ...+.
T Consensus 69 ~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~ 148 (275)
T PRK06940 69 ATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPT 148 (275)
T ss_pred HHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccc
Confidence 3 589999999986555567789999999999999988653 112456888886543221000000000 00000
Q ss_pred hHHHHHHhhhcHHHHHHHH---HhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccC
Q psy7539 153 HNVIEKAELLSKNELELLK---QELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDN 225 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~ 225 (318)
. .+...+ +.-.......|+.||.+.+.+.+..+. +|+.+..+.||.+-.+.... .
T Consensus 149 ~------------~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~------~ 210 (275)
T PRK06940 149 E------------ELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQD------E 210 (275)
T ss_pred c------------cccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchh------h
Confidence 0 000000 000000126899999999888876544 58999999999875532100 0
Q ss_pred CCch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 226 INGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 226 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+... ......+.. . .+ ..-+...+|+|.++..++...... ..+..+.+.++
T Consensus 211 ~~~~~~~~~~~~~~-~---~p-----~~r~~~peeia~~~~fL~s~~~~~--itG~~i~vdgg 262 (275)
T PRK06940 211 LNGPRGDGYRNMFA-K---SP-----AGRPGTPDEIAALAEFLMGPRGSF--ITGSDFLVDGG 262 (275)
T ss_pred hcCCchHHHHHHhh-h---CC-----cccCCCHHHHHHHHHHHcCcccCc--ccCceEEEcCC
Confidence 0000 011111111 0 01 113678899999999888543321 13667777655
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.9e-08 Score=85.43 Aligned_cols=184 Identities=12% Similarity=0.085 Sum_probs=119.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|++. |++|+++.|+... .+.+. ...++++.+|+++. +.++.+.
T Consensus 15 ~~la~~L~~~--G~~v~~~~r~~~~---~~~~~--------------------~~~~~~~~~D~~~~------~~v~~~~ 63 (222)
T PRK06953 15 REFVRQYRAD--GWRVIATARDAAA---LAALQ--------------------ALGAEALALDVADP------ASVAGLA 63 (222)
T ss_pred HHHHHHHHhC--CCEEEEEECCHHH---HHHHH--------------------hccceEEEecCCCH------HHHHHHH
Confidence 3688899887 8999999986321 11111 12456889999987 4555543
Q ss_pred ---c--CccEEEEcccccC---------cchhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 81 ---E--TIHIVYHIAATVR---------FDDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ---~--~~d~Vih~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
. ++|+|||+||... ....+...+++|+.++.++++++... ..-.+++++||..+.....+
T Consensus 64 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---- 139 (222)
T PRK06953 64 WKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT---- 139 (222)
T ss_pred HHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc----
Confidence 2 4899999999752 12345678999999999999988752 12246899998644221000
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccccccCCCCCCc
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
..+ ...|+.+|...+.+++.+.. .+++++.++||.+..+.
T Consensus 140 --~~~-----------------------------~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~------- 181 (222)
T PRK06953 140 --GTT-----------------------------GWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDM------- 181 (222)
T ss_pred --CCC-----------------------------ccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCC-------
Confidence 000 04699999999999988776 57889999998652210
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEee
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 285 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~ 285 (318)
.. + ...+..++.+..+..++..... ...+..|...
T Consensus 182 ----~~------------------~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 216 (222)
T PRK06953 182 ----GG------------------A----QAALDPAQSVAGMRRVIAQATR--RDNGRFFQYD 216 (222)
T ss_pred ----CC------------------C----CCCCCHHHHHHHHHHHHHhcCc--ccCceEEeeC
Confidence 00 0 1135678888888888765432 2235555544
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.3e-08 Score=87.47 Aligned_cols=206 Identities=8% Similarity=-0.001 Sum_probs=124.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCC---CCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKN---KNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~---~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~ 78 (318)
+++++|++. |.+|+++.|+.+. ....+.+.+... .+ .....++.++.+|+++. +++..
T Consensus 21 aia~~la~~--G~~vii~~~~~~~~~~~~~~~~~~~~~~-----~l------~~~~~~~~~~~~Dv~~~------~~v~~ 81 (286)
T PRK07791 21 AHALAFAAE--GARVVVNDIGVGLDGSASGGSAAQAVVD-----EI------VAAGGEAVANGDDIADW------DGAAN 81 (286)
T ss_pred HHHHHHHHC--CCEEEEeeCCccccccccchhHHHHHHH-----HH------HhcCCceEEEeCCCCCH------HHHHH
Confidence 678889988 8999888875411 001112221111 00 11124678899999986 45554
Q ss_pred Hh-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC------CccEEEEeccccc
Q psy7539 79 LS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH------LQLFVYVSTAYCH 135 (318)
Q Consensus 79 ~~-------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~------~~~~v~~SS~~~~ 135 (318)
++ ..+|++||+||.... ...+...+++|+.|+..+++++... .. ..+||++||..+.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~ 161 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL 161 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence 43 368999999997421 1345678999999998888776521 01 1479999996653
Q ss_pred cCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 136 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
... | ....|+.||.+.+.+.+..+. +|+++..+.|+ +
T Consensus 162 ~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~ 202 (286)
T PRK07791 162 QGS----------V----------------------------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-A 202 (286)
T ss_pred cCC----------C----------------------------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-C
Confidence 211 0 017899999999988877654 58999999998 3
Q ss_pred ccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 212 IPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 212 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. + +.. ......... .+.....+...+|++.+++.++...... ..+..+.+.++
T Consensus 203 ~T----~-------~~~--~~~~~~~~~-------~~~~~~~~~~pedva~~~~~L~s~~~~~--itG~~i~vdgG 256 (286)
T PRK07791 203 RT----R-------MTE--TVFAEMMAK-------PEEGEFDAMAPENVSPLVVWLGSAESRD--VTGKVFEVEGG 256 (286)
T ss_pred CC----C-------cch--hhHHHHHhc-------CcccccCCCCHHHHHHHHHHHhCchhcC--CCCcEEEEcCC
Confidence 11 0 100 111111110 0111123567899999999988653321 24677777766
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=5.9e-08 Score=84.61 Aligned_cols=206 Identities=12% Similarity=0.050 Sum_probs=127.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|++..|+... .+...+.+. . .....++.++.+|++++ +++..+++
T Consensus 33 ~ia~~l~~~--G~~V~~~~~~~~~---~~~~~~~~~--------~----~~~~~~~~~~~~Dl~~~------~~~~~~~~ 89 (262)
T PRK07831 33 ATARRALEE--GARVVISDIHERR---LGETADELA--------A----ELGLGRVEAVVCDVTSE------AQVDALID 89 (262)
T ss_pred HHHHHHHHc--CCEEEEEeCCHHH---HHHHHHHHH--------H----hcCCceEEEEEccCCCH------HHHHHHHH
Confidence 578888888 8999988875321 111111110 0 00113688899999976 45555443
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~E 143 (318)
.+|+|||+||.... ...+...+++|+.++..+++++... .. -..+|++||..+....
T Consensus 90 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----- 164 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ----- 164 (262)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-----
Confidence 57999999996321 1335567889999999888876532 12 3578888886543210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.+|.+.+.+.+.++. +|+++.+++||.+..+...
T Consensus 165 ----~~-----------------------------~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~-- 209 (262)
T PRK07831 165 ----HG-----------------------------QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLA-- 209 (262)
T ss_pred ----CC-----------------------------CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccc--
Confidence 01 17899999999999988764 5899999999988653211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .+......+.... ...-+...+|++++++.++...... ..+.++.+.++
T Consensus 210 -----~~-~~~~~~~~~~~~~---------~~~r~~~p~~va~~~~~l~s~~~~~--itG~~i~v~~~ 260 (262)
T PRK07831 210 -----KV-TSAELLDELAARE---------AFGRAAEPWEVANVIAFLASDYSSY--LTGEVVSVSSQ 260 (262)
T ss_pred -----cc-cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhcC--cCCceEEeCCC
Confidence 11 1122222222211 0123567789999999988754321 13566666543
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.1e-08 Score=89.29 Aligned_cols=213 Identities=13% Similarity=0.035 Sum_probs=126.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+... .+.+.+.+. .....++.++.+|++++ ++++.++
T Consensus 22 ~aia~~l~~~--G~~V~~~~r~~~~---~~~~~~~~~-------------~~~~~~~~~~~~Dv~~~------~~i~~~~ 77 (263)
T PRK08339 22 FGVARVLARA--GADVILLSRNEEN---LKKAREKIK-------------SESNVDVSYIVADLTKR------EDLERTV 77 (263)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH---HHHHHHHHH-------------hhcCCceEEEEecCCCH------HHHHHHH
Confidence 3688899988 9999999985321 111211110 11124688999999987 4566555
Q ss_pred c------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCccccc
Q psy7539 81 E------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|++||+||.... ...++..+++|+.+...+.+++ ++ .+..++|++||..+....
T Consensus 78 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~-~~~g~Ii~isS~~~~~~~----- 151 (263)
T PRK08339 78 KELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMER-KGFGRIIYSTSVAIKEPI----- 151 (263)
T ss_pred HHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCEEEEEcCccccCCC-----
Confidence 4 58999999996421 1345568888988766655544 33 245689999997653210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.+|.+.+.+.+..+. +|+++..+.||.+-.+.....
T Consensus 152 -----~----------------------------~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~ 198 (263)
T PRK08339 152 -----P----------------------------NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQL 198 (263)
T ss_pred -----C----------------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHH
Confidence 1 016799999999988877655 589999999997743210000
Q ss_pred -CCccc-CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 -PGWTD-NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 -~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..... .-..+......+.. . . ...-+...+|+|.++..++...... ..+..+.+.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~-~---~-----p~~r~~~p~dva~~v~fL~s~~~~~--itG~~~~vdgG 257 (263)
T PRK08339 199 AQDRAKREGKSVEEALQEYAK-P---I-----PLGRLGEPEEIGYLVAFLASDLGSY--INGAMIPVDGG 257 (263)
T ss_pred HHhhhhccCCCHHHHHHHHhc-c---C-----CcccCcCHHHHHHHHHHHhcchhcC--ccCceEEECCC
Confidence 00000 00000011111111 0 0 1123567899999999888653321 13667777666
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.6e-09 Score=88.84 Aligned_cols=191 Identities=11% Similarity=0.007 Sum_probs=119.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |.+|+++.|.... .. +.+.+.+ .....++.++.+|++++ +++..++
T Consensus 12 ~~~a~~l~~~--G~~v~~~~~~~~~-~~-~~~~~~l--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 67 (239)
T TIGR01831 12 RAIANRLAAD--GFEICVHYHSGRS-DA-ESVVSAI--------------QAQGGNARLLQFDVADR------VACRTLL 67 (239)
T ss_pred HHHHHHHHHC--CCEEEEEeCCCHH-HH-HHHHHHH--------------HHcCCeEEEEEccCCCH------HHHHHHH
Confidence 3688899888 9999888875321 11 1111111 11234789999999986 4555443
Q ss_pred c-------CccEEEEcccccC-------cchhHHHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVR-------FDDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|++||+||... ....+...+++|+.++.++++++. +..+..+||++||.......
T Consensus 68 ~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---- 143 (239)
T TIGR01831 68 EADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN---- 143 (239)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC----
Confidence 3 5799999999642 123456789999999999988763 11234689999996543221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+. ...|+.+|.+.+.+.+.... .|++++.++||.+.+....
T Consensus 144 -----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~- 188 (239)
T TIGR01831 144 -----RG-----------------------------QVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLA- 188 (239)
T ss_pred -----CC-----------------------------CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccch-
Confidence 00 16899999998887776654 5899999999987543211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
.. + ......... .+ ..-+...+|+++++..++....
T Consensus 189 ------~~--~-~~~~~~~~~----~~-----~~~~~~~~~va~~~~~l~~~~~ 224 (239)
T TIGR01831 189 ------EV--E-HDLDEALKT----VP-----MNRMGQPAEVASLAGFLMSDGA 224 (239)
T ss_pred ------hh--h-HHHHHHHhc----CC-----CCCCCCHHHHHHHHHHHcCchh
Confidence 00 0 111111111 00 1134567999999999887543
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.5e-08 Score=85.47 Aligned_cols=198 Identities=16% Similarity=0.104 Sum_probs=123.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
++++.|+++ |++|+++.|+.. ..+.+.+.. . ...+++++.+|++++ +++..++
T Consensus 20 ~~a~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~-~~~~~~~~~~Dl~~~------~~~~~~~~ 73 (238)
T PRK05786 20 AVAYFALKE--GAQVCINSRNEN---KLKRMKKTL--------------S-KYGNIHYVVGDVSST------ESARNVIE 73 (238)
T ss_pred HHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------H-hcCCeEEEECCCCCH------HHHHHHHH
Confidence 578888887 999999999532 122221110 1 113688899999986 4555443
Q ss_pred ------cCccEEEEcccccCc-----chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCC
Q psy7539 81 ------ETIHIVYHIAATVRF-----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPP 148 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~ 148 (318)
.++|.+||+++.... .......++.|+.+...+++.+... ..-.+||++||..+.... ..
T Consensus 74 ~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~--------~~ 145 (238)
T PRK05786 74 KAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA--------SP 145 (238)
T ss_pred HHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC--------CC
Confidence 347999999986321 1223456888999988888877653 122479999986542110 00
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCccc
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTD 224 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~ 224 (318)
+ ...|+.+|.+.+.+++.+.. .+++++++||+.+++...
T Consensus 146 ~-----------------------------~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~-------- 188 (238)
T PRK05786 146 D-----------------------------QLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFE-------- 188 (238)
T ss_pred C-----------------------------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC--------
Confidence 1 16799999999988877664 489999999998877421
Q ss_pred CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 225 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+... + ... . .....++..+|++++++.++...... ..+..+.+.++
T Consensus 189 ----~~~~-~---~~~-~------~~~~~~~~~~~va~~~~~~~~~~~~~--~~g~~~~~~~~ 234 (238)
T PRK05786 189 ----PERN-W---KKL-R------KLGDDMAPPEDFAKVIIWLLTDEADW--VDGVVIPVDGG 234 (238)
T ss_pred ----chhh-h---hhh-c------cccCCCCCHHHHHHHHHHHhcccccC--ccCCEEEECCc
Confidence 0000 0 000 0 01124677899999999998753321 13566666443
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.4e-09 Score=89.59 Aligned_cols=145 Identities=10% Similarity=0.107 Sum_probs=98.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+.... +.+.+ ..++.++.+|++++ +++..+.+
T Consensus 16 ~la~~l~~~--G~~V~~~~r~~~~~---~~~~~-------------------~~~~~~~~~D~~d~------~~~~~~~~ 65 (225)
T PRK08177 16 GLVDRLLER--GWQVTATVRGPQQD---TALQA-------------------LPGVHIEKLDMNDP------ASLDQLLQ 65 (225)
T ss_pred HHHHHHHhC--CCEEEEEeCCCcch---HHHHh-------------------ccccceEEcCCCCH------HHHHHHHH
Confidence 678899988 89999999975432 11111 13567788999876 45555544
Q ss_pred -----CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCccccccc
Q psy7539 82 -----TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 82 -----~~d~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
++|+|||+||.... .......+++|+.++..+.+++... .+...++++||.++.....
T Consensus 66 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~------ 139 (225)
T PRK08177 66 RLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELP------ 139 (225)
T ss_pred HhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccC------
Confidence 58999999987421 1234457788999999998887642 1224688888864422100
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
...+ ...|+.+|.+.+.+++.+.. +++.+..++||.+
T Consensus 140 ~~~~-----------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i 180 (225)
T PRK08177 140 DGGE-----------------------------MPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWV 180 (225)
T ss_pred CCCC-----------------------------ccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCce
Confidence 0000 15799999999999988764 4688999999966
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.9e-09 Score=90.19 Aligned_cols=136 Identities=18% Similarity=0.166 Sum_probs=95.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHH-HHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERL-EEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+.+|.++ |.+++.++|... ..+++ +++.+ .. +. .++.++++|+++. ++....
T Consensus 26 ~~lA~~la~~--G~~l~lvar~~r---rl~~v~~~l~~---------~~--~~--~~v~~~~~Dvs~~------~~~~~~ 81 (282)
T KOG1205|consen 26 EALAYELAKR--GAKLVLVARRAR---RLERVAEELRK---------LG--SL--EKVLVLQLDVSDE------ESVKKF 81 (282)
T ss_pred HHHHHHHHhC--CCceEEeehhhh---hHHHHHHHHHH---------hC--Cc--CccEEEeCccCCH------HHHHHH
Confidence 3688999998 999888888533 23344 22211 11 11 1699999999986 455533
Q ss_pred -------hcCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 80 -------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 80 -------~~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+.++|++||+||.... ....+..+++|+.|+..+.+++..+ .+--++|.+||..+...
T Consensus 82 ~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~----- 156 (282)
T KOG1205|consen 82 VEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP----- 156 (282)
T ss_pred HHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC-----
Confidence 3489999999998531 1334568999999988888877543 12358999999887543
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME 198 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 198 (318)
.|. ...|++||.+.+.+.....+
T Consensus 157 -----~P~----------------------------~~~Y~ASK~Al~~f~etLR~ 179 (282)
T KOG1205|consen 157 -----LPF----------------------------RSIYSASKHALEGFFETLRQ 179 (282)
T ss_pred -----CCc----------------------------ccccchHHHHHHHHHHHHHH
Confidence 111 05899999999999988876
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.6e-08 Score=83.89 Aligned_cols=203 Identities=12% Similarity=0.049 Sum_probs=126.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+.++++|+++ |++|++..|+. ...+.+.+. ...++.++.+|++++ ++++.++
T Consensus 23 ~a~a~~la~~--G~~Vi~~~r~~---~~~~~~~~~-----------------~~~~~~~~~~Dl~~~------~~v~~~~ 74 (252)
T PRK06079 23 WGCAQAIKDQ--GATVIYTYQND---RMKKSLQKL-----------------VDEEDLLVECDVASD------ESIERAF 74 (252)
T ss_pred HHHHHHHHHC--CCEEEEecCch---HHHHHHHhh-----------------ccCceeEEeCCCCCH------HHHHHHH
Confidence 3678899988 99999988851 222222211 113577899999986 4555443
Q ss_pred -------cCccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccc
Q psy7539 81 -------ETIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~ 141 (318)
..+|++||+||.... ...++..+++|+.+...+.+++... .+-.++|++||......
T Consensus 75 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~---- 150 (252)
T PRK06079 75 ATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA---- 150 (252)
T ss_pred HHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc----
Confidence 258999999996421 1234567888999999888877642 12257999998654211
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.| ....|+.||.+.+.+.+..+. +|+++..+.||.|-.+...
T Consensus 151 ------~~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~ 196 (252)
T PRK06079 151 ------IP----------------------------NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVT 196 (252)
T ss_pred ------CC----------------------------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccc
Confidence 00 017899999999999887765 5899999999977432110
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...........+... .+ ..-+...+|+|+++..++...... ..+.++.+.++
T Consensus 197 -------~~~~~~~~~~~~~~~----~p-----~~r~~~pedva~~~~~l~s~~~~~--itG~~i~vdgg 248 (252)
T PRK06079 197 -------GIKGHKDLLKESDSR----TV-----DGVGVTIEEVGNTAAFLLSDLSTG--VTGDIIYVDKG 248 (252)
T ss_pred -------cCCChHHHHHHHHhc----Cc-----ccCCCCHHHHHHHHHHHhCccccc--ccccEEEeCCc
Confidence 111111222221111 01 123677899999999988654321 13556665544
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.3e-08 Score=84.93 Aligned_cols=184 Identities=10% Similarity=0.051 Sum_probs=115.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH-
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML- 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~- 79 (318)
++|++.|+++ |++|+++.|+... +.+.. ..++ .....++.++.+|+.+.. .+++..+
T Consensus 20 ~~la~~l~~~--g~~V~~~~r~~~~------~~~~~-----~~l~-----~~~~~~~~~~~~D~~~~~----~~~~~~~~ 77 (239)
T PRK08703 20 EQVAKAYAAA--GATVILVARHQKK------LEKVY-----DAIV-----EAGHPEPFAIRFDLMSAE----EKEFEQFA 77 (239)
T ss_pred HHHHHHHHHc--CCEEEEEeCChHH------HHHHH-----HHHH-----HcCCCCcceEEeeecccc----hHHHHHHH
Confidence 3688899888 8999999996421 11111 0110 011235667888987531 1223322
Q ss_pred ------h-cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccc
Q psy7539 80 ------S-ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 80 ------~-~~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ..+|+|||+||.... ...+...+++|+.|+.++++++.+. .+..++|++||..+...
T Consensus 78 ~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~---- 153 (239)
T PRK08703 78 ATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETP---- 153 (239)
T ss_pred HHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccC----
Confidence 2 367999999996321 1234457899999998888877542 13468999999654211
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----c-CCcEEEecccccccccC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A-GMPCMILRPSIIIPIWK 216 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~-~~~~~ilR~~~v~G~~~ 216 (318)
... ...|+.||.+.+.++..+.. . ++++++++||.+.++..
T Consensus 154 -----~~~-----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~ 199 (239)
T PRK08703 154 -----KAY-----------------------------WGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR 199 (239)
T ss_pred -----CCC-----------------------------ccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence 000 16899999999999877655 2 58999999998866421
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhh
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN 270 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~ 270 (318)
... . .+.....+...+|++.++..++..
T Consensus 200 ~~~------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 200 IKS------------------------H--PGEAKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred ccc------------------------C--CCCCccccCCHHHHHHHHHHHhCc
Confidence 100 0 011112356889999999988864
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.4e-09 Score=89.54 Aligned_cols=208 Identities=12% Similarity=0.059 Sum_probs=126.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+....+..+.+.+.-. ...+..++.+|++++ +++..++
T Consensus 22 ~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~d~------~~v~~~~ 78 (258)
T PRK07370 22 WGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTE---------------PLNPSLFLPCDVQDD------AQIEETF 78 (258)
T ss_pred HHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHh---------------ccCcceEeecCcCCH------HHHHHHH
Confidence 3678899988 9998887775432223333333211 113466889999987 4665544
Q ss_pred c-------CccEEEEcccccC-------c----chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVR-------F----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~-------~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ .+|++||+||... + ...++..+++|+.|+..+.+++... ..-.++|++||......
T Consensus 79 ~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~---- 154 (258)
T PRK07370 79 ETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA---- 154 (258)
T ss_pred HHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC----
Confidence 3 5899999999642 1 1234567888999999888876542 12258999999654211
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.| ....|+.||.+.+.+.+.... +|+.+..+.||.+-.+...
T Consensus 155 ------~~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~ 200 (258)
T PRK07370 155 ------IP----------------------------NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASS 200 (258)
T ss_pred ------Cc----------------------------ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhh
Confidence 01 017899999999999888765 5799999999977432110
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+.+.......... . ....-+...+|++.++..++...... ..+..+.+.++
T Consensus 201 -------~~~~~~~~~~~~~~-~--------~p~~r~~~~~dva~~~~fl~s~~~~~--~tG~~i~vdgg 252 (258)
T PRK07370 201 -------AVGGILDMIHHVEE-K--------APLRRTVTQTEVGNTAAFLLSDLASG--ITGQTIYVDAG 252 (258)
T ss_pred -------ccccchhhhhhhhh-c--------CCcCcCCCHHHHHHHHHHHhChhhcc--ccCcEEEECCc
Confidence 00010011111100 0 01123667799999999988654321 13556666544
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.6e-08 Score=83.20 Aligned_cols=150 Identities=15% Similarity=0.132 Sum_probs=101.0
Q ss_pred EeccCCCCCCCCCHHHHHHHhc---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEE
Q psy7539 60 INGDVAVPDLGISAEDRQMLSE---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVY 128 (318)
Q Consensus 60 ~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~ 128 (318)
+.+|++++ ++++.+++ ++|+|||+||.... ...+...+++|+.++.++++++... .....|++
T Consensus 36 ~~~D~~~~------~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~ 109 (199)
T PRK07578 36 VQVDITDP------ASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTL 109 (199)
T ss_pred eEecCCCh------HHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 57899876 46666655 78999999996422 1234567889999999999988642 12357899
Q ss_pred EeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEE
Q psy7539 129 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMI 205 (318)
Q Consensus 129 ~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~i 205 (318)
+||..+.... |. ...|+.+|.+.+.+.+.... .|+.+..
T Consensus 110 iss~~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~ 151 (199)
T PRK07578 110 TSGILSDEPI----------PG----------------------------GASAATVNGALEGFVKAAALELPRGIRINV 151 (199)
T ss_pred EcccccCCCC----------CC----------------------------chHHHHHHHHHHHHHHHHHHHccCCeEEEE
Confidence 9986653210 00 16899999999988877654 4788999
Q ss_pred ecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEee
Q psy7539 206 LRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 285 (318)
Q Consensus 206 lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~ 285 (318)
+.||.+-.. .. . .+ ..++ ...++..+|+|+.++.++..... +++|+++
T Consensus 152 i~Pg~v~t~------------~~---~-----~~--~~~~-----~~~~~~~~~~a~~~~~~~~~~~~-----g~~~~~~ 199 (199)
T PRK07578 152 VSPTVLTES------------LE---K-----YG--PFFP-----GFEPVPAARVALAYVRSVEGAQT-----GEVYKVG 199 (199)
T ss_pred EcCCcccCc------------hh---h-----hh--hcCC-----CCCCCCHHHHHHHHHHHhcccee-----eEEeccC
Confidence 999865211 00 0 00 0011 12467999999999999986543 6777753
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.5e-08 Score=83.70 Aligned_cols=207 Identities=12% Similarity=0.032 Sum_probs=121.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC-----CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK-----NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAED 75 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~-----~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~ 75 (318)
++++++|+++ |.+|++..|..... ...+.+.+.. ..+ .....++.++.+|+++. ++
T Consensus 22 ~~~a~~l~~~--G~~vi~~~~~~~~~~~~~~~~~~~~~~~~-----~~~------~~~g~~~~~~~~D~~~~------~~ 82 (256)
T PRK12859 22 AAICKELAEA--GADIFFTYWTAYDKEMPWGVDQDEQIQLQ-----EEL------LKNGVKVSSMELDLTQN------DA 82 (256)
T ss_pred HHHHHHHHHC--CCeEEEEecccccccccccccHHHHHHHH-----HHH------HhcCCeEEEEEcCCCCH------HH
Confidence 3688999988 88888875432110 0011111110 000 11234788899999986 45
Q ss_pred HHHHhc-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCC
Q psy7539 76 RQMLSE-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKE 138 (318)
Q Consensus 76 ~~~~~~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~ 138 (318)
+..+++ .+|+|||+||..... ..+...+++|+.|...+..++... .+-.+||++||..+....
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 162 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM 162 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC
Confidence 555443 479999999964221 234457899999988876544321 134589999997653210
Q ss_pred cccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccc
Q psy7539 139 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPI 214 (318)
Q Consensus 139 ~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~ 214 (318)
. +...|+.+|.+.+.+...... ++++++.++||.+-..
T Consensus 163 ---------~-----------------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~ 204 (256)
T PRK12859 163 ---------V-----------------------------GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTG 204 (256)
T ss_pred ---------C-----------------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCC
Confidence 0 017899999999999877654 5799999999976331
Q ss_pred cCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 215 WKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 215 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ......+.. . . ....+...+|+++++..++...... -.+.++.+.++
T Consensus 205 -----------~~~-~~~~~~~~~-~---~-----~~~~~~~~~d~a~~~~~l~s~~~~~--~~G~~i~~dgg 254 (256)
T PRK12859 205 -----------WMT-EEIKQGLLP-M---F-----PFGRIGEPKDAARLIKFLASEEAEW--ITGQIIHSEGG 254 (256)
T ss_pred -----------CCC-HHHHHHHHh-c---C-----CCCCCcCHHHHHHHHHHHhCccccC--ccCcEEEeCCC
Confidence 111 111111111 0 0 0123456799999998887553221 13556665544
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.2e-08 Score=83.28 Aligned_cols=204 Identities=12% Similarity=0.034 Sum_probs=125.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
+++++|+++ |.+|++..|+.. ..+.+.+.. .+ .....++.+|++++ +++.+++
T Consensus 27 a~a~~la~~--G~~v~l~~r~~~---~~~~~~~~~--------------~~-~~~~~~~~~D~~~~------~~v~~~~~ 80 (258)
T PRK07533 27 GCARAFRAL--GAELAVTYLNDK---ARPYVEPLA--------------EE-LDAPIFLPLDVREP------GQLEAVFA 80 (258)
T ss_pred HHHHHHHHc--CCEEEEEeCChh---hHHHHHHHH--------------Hh-hccceEEecCcCCH------HHHHHHHH
Confidence 678899988 899999888532 122232221 11 12345789999986 4555543
Q ss_pred ------cCccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccc
Q psy7539 81 ------ETIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
..+|++||+||.... ...++..+++|+.|...+.+++... ..-.++|++||..+...
T Consensus 81 ~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~----- 155 (258)
T PRK07533 81 RIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV----- 155 (258)
T ss_pred HHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccC-----
Confidence 258999999996421 1335668999999999999877642 12247899998654211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.| ....|+.||.+.+.+.+.... +|+.+..+.||.+-.+...
T Consensus 156 -----~~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~- 201 (258)
T PRK07533 156 -----VE----------------------------NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAAS- 201 (258)
T ss_pred -----Cc----------------------------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhh-
Confidence 01 016899999999988877654 5899999999977442111
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+............. .+ ..-+...+|++.+++.++...... ..+..+.+.++
T Consensus 202 ------~~~~~~~~~~~~~~~----~p-----~~r~~~p~dva~~~~~L~s~~~~~--itG~~i~vdgg 253 (258)
T PRK07533 202 ------GIDDFDALLEDAAER----AP-----LRRLVDIDDVGAVAAFLASDAARR--LTGNTLYIDGG 253 (258)
T ss_pred ------ccCCcHHHHHHHHhc----CC-----cCCCCCHHHHHHHHHHHhChhhcc--ccCcEEeeCCc
Confidence 111111111111111 01 123567899999999888653221 13666666544
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.6e-09 Score=92.10 Aligned_cols=160 Identities=13% Similarity=0.043 Sum_probs=103.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|++..|+.. ...+.+.++.. .....++.++.+|+++. +++..+++
T Consensus 29 ~~a~~La~~--G~~Vil~~R~~~--~~~~~~~~l~~-------------~~~~~~v~~~~~Dl~d~------~sv~~~~~ 85 (313)
T PRK05854 29 GLARRLAAA--GAEVILPVRNRA--KGEAAVAAIRT-------------AVPDAKLSLRALDLSSL------ASVAALGE 85 (313)
T ss_pred HHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHH-------------hCCCCceEEEEecCCCH------HHHHHHHH
Confidence 678999988 999999999632 11222221100 11123688999999986 45555443
Q ss_pred -------CccEEEEcccccCcc------hhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCc---cccc
Q psy7539 82 -------TIHIVYHIAATVRFD------DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEK---VLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~~------~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~---~~~E 143 (318)
.+|++||+||..... +.++..+++|+.|...+.+.+... .+..++|++||........ .+.+
T Consensus 86 ~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~ 165 (313)
T PRK05854 86 QLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNW 165 (313)
T ss_pred HHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccc
Confidence 589999999975321 335568899999977777665421 1335899999975533211 1111
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEeccccccc
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIP 213 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G 213 (318)
..... ....|+.||.+.+.+...+.+ .|+.+..+.||.|-.
T Consensus 166 ~~~~~-----------------------------~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T 212 (313)
T PRK05854 166 ERSYA-----------------------------GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT 212 (313)
T ss_pred cccCc-----------------------------chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence 10000 116899999999998877653 368999999998854
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=7.3e-09 Score=90.37 Aligned_cols=210 Identities=14% Similarity=0.085 Sum_probs=126.6
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+... .+.+. .....++.++.+|++++ +++..+++
T Consensus 21 ~ia~~l~~~--G~~V~~~~r~~~~---~~~~~-----------------~~~~~~~~~~~~D~~~~------~~~~~~~~ 72 (263)
T PRK06200 21 ALVERFLAE--GARVAVLERSAEK---LASLR-----------------QRFGDHVLVVEGDVTSY------ADNQRAVD 72 (263)
T ss_pred HHHHHHHHC--CCEEEEEeCCHHH---HHHHH-----------------HHhCCcceEEEccCCCH------HHHHHHHH
Confidence 678899988 9999999985321 11221 11124678899999986 45554443
Q ss_pred -------CccEEEEcccccCc-----c---h----hHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcc
Q psy7539 82 -------TIHIVYHIAATVRF-----D---D----YMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-----~---~----~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~ 140 (318)
.+|++||+||.... . . .++..+++|+.++..+++++... ..-.++|++||..++...
T Consensus 73 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-- 150 (263)
T PRK06200 73 QTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG-- 150 (263)
T ss_pred HHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC--
Confidence 68999999996421 1 1 13456788999999988887642 122479999997654321
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~ 217 (318)
.. ...|+.||.+.+.+++.++. .++.+..+.||.+..+...
T Consensus 151 -------~~-----------------------------~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~ 194 (263)
T PRK06200 151 -------GG-----------------------------GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRG 194 (263)
T ss_pred -------CC-----------------------------CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcC
Confidence 00 16899999999999988766 3589999999988543211
Q ss_pred CC-CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc-cCCCCCCCcEEEeeCC
Q psy7539 218 PL-PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF-LSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~-~~~~~~~~~~~ni~~~ 287 (318)
.. .+-.........-........ ....-+...+|++.++..++... .. ...+..+.+.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~--------~p~~r~~~~~eva~~~~fl~s~~~~~--~itG~~i~vdgG 256 (263)
T PRK06200 195 PASLGQGETSISDSPGLADMIAAI--------TPLQFAPQPEDHTGPYVLLASRRNSR--ALTGVVINADGG 256 (263)
T ss_pred ccccCCCCcccccccchhHHhhcC--------CCCCCCCCHHHHhhhhhheecccccC--cccceEEEEcCc
Confidence 00 000000000000000111110 01124677899999999888654 22 123667777655
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.1e-08 Score=89.18 Aligned_cols=148 Identities=13% Similarity=0.129 Sum_probs=101.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++.++. .....++.++.+|+++. +++..++
T Consensus 19 ~~ia~~l~~~--G~~V~~~~r~~~------~~~~l~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 70 (262)
T TIGR03325 19 RAIVDRFVAE--GARVAVLDKSAA------GLQELE--------------AAHGDAVVGVEGDVRSL------DDHKEAV 70 (262)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------hhcCCceEEEEeccCCH------HHHHHHH
Confidence 3688999988 999999988532 122111 11124688899999875 3444433
Q ss_pred -------cCccEEEEcccccCc-------c-----hhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCc
Q psy7539 81 -------ETIHIVYHIAATVRF-------D-----DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~-----~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~ 139 (318)
.++|++||+||.... . ..++..+++|+.++..+++++... ..-.++|++||..+....
T Consensus 71 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~- 149 (262)
T TIGR03325 71 ARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN- 149 (262)
T ss_pred HHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC-
Confidence 368999999986321 1 134568899999999999988653 122478998886543210
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPI 214 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~ 214 (318)
+ ....|+.||.+.+.+.+.++. ..+++..+.||.+..+
T Consensus 150 ---------~----------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~ 190 (262)
T TIGR03325 150 ---------G----------------------------GGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSD 190 (262)
T ss_pred ---------C----------------------------CCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCC
Confidence 0 016899999999999988876 2488999999988543
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.2e-07 Score=82.81 Aligned_cols=205 Identities=12% Similarity=0.033 Sum_probs=123.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |.+|++..|.. ...+.++++.. . ......+.+|++++ ++++.++
T Consensus 22 ~a~a~~l~~~--G~~v~~~~~~~---~~~~~~~~~~~--------------~-~~~~~~~~~Dv~~~------~~v~~~~ 75 (261)
T PRK08690 22 YGIAKACREQ--GAELAFTYVVD---KLEERVRKMAA--------------E-LDSELVFRCDVASD------DEINQVF 75 (261)
T ss_pred HHHHHHHHHC--CCEEEEEcCcH---HHHHHHHHHHh--------------c-cCCceEEECCCCCH------HHHHHHH
Confidence 3688999988 99998877641 22233333211 1 12345789999987 4666554
Q ss_pred c-------CccEEEEcccccCc--------c----hhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCc
Q psy7539 81 E-------TIHIVYHIAATVRF--------D----DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~----~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~ 139 (318)
+ ++|++||+||.... . ..++..+++|+.+...+.+++... .+-.++|++||......
T Consensus 76 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~-- 153 (261)
T PRK08690 76 ADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA-- 153 (261)
T ss_pred HHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC--
Confidence 3 68999999997531 1 123446788999888877765532 12247999998665321
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
.| ....|+.||.+.+.+.+..+. +|+++..+.||.+-...
T Consensus 154 --------~~----------------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~ 197 (261)
T PRK08690 154 --------IP----------------------------NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLA 197 (261)
T ss_pred --------CC----------------------------CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchh
Confidence 01 017899999999988877643 68999999999774321
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .+.........+.. . .+ ..-+...+|+|+++..++...... ..+..+-+.++
T Consensus 198 ~~-------~~~~~~~~~~~~~~-~---~p-----~~r~~~peevA~~v~~l~s~~~~~--~tG~~i~vdgG 251 (261)
T PRK08690 198 AS-------GIADFGKLLGHVAA-H---NP-----LRRNVTIEEVGNTAAFLLSDLSSG--ITGEITYVDGG 251 (261)
T ss_pred hh-------cCCchHHHHHHHhh-c---CC-----CCCCCCHHHHHHHHHHHhCcccCC--cceeEEEEcCC
Confidence 10 11111111111111 1 01 123677899999999998754321 13566666554
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.3e-07 Score=82.22 Aligned_cols=213 Identities=14% Similarity=0.025 Sum_probs=125.3
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+... .+.+.+.+. .....++.++.+|++++ +++..+++
T Consensus 22 ~ia~~l~~~--G~~V~~~~r~~~~---~~~~~~~l~-------------~~~~~~~~~~~~D~~~~------~~~~~~~~ 77 (259)
T PRK06125 22 AAAEAFAAE--GCHLHLVARDADA---LEALAADLR-------------AAHGVDVAVHALDLSSP------EAREQLAA 77 (259)
T ss_pred HHHHHHHHc--CCEEEEEeCCHHH---HHHHHHHHH-------------hhcCCceEEEEecCCCH------HHHHHHHH
Confidence 678888887 8999999986321 111111111 11134688899999886 45655554
Q ss_pred ---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCCC
Q psy7539 82 ---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYPP 148 (318)
Q Consensus 82 ---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~~ 148 (318)
.+|++||+||.... ...+...+++|+.+...+.+++... .+..++|++||...... .
T Consensus 78 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~----------~ 147 (259)
T PRK06125 78 EAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENP----------D 147 (259)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCC----------C
Confidence 68999999996421 1334567899999988888876321 13357999998644211 0
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC-CCcc
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL-PGWT 223 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~-~g~~ 223 (318)
+ ....|+.+|.+.+.+...... .|+++..+.||.+-.+..... ....
T Consensus 148 ~----------------------------~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~ 199 (259)
T PRK06125 148 A----------------------------DYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRA 199 (259)
T ss_pred C----------------------------CchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhh
Confidence 0 016789999999988887653 589999999997643210000 0000
Q ss_pred cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 224 DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....+.......+... . ...-+...+|+|.+++.++...... ..+..+.+.++
T Consensus 200 ~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~va~~~~~l~~~~~~~--~~G~~i~vdgg 252 (259)
T PRK06125 200 RAELGDESRWQELLAG----L-----PLGRPATPEEVADLVAFLASPRSGY--TSGTVVTVDGG 252 (259)
T ss_pred hcccCCHHHHHHHhcc----C-----CcCCCcCHHHHHHHHHHHcCchhcc--ccCceEEecCC
Confidence 0000000001111110 0 0123678899999999888643221 13667777655
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.4e-08 Score=85.29 Aligned_cols=207 Identities=12% Similarity=0.018 Sum_probs=124.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |.+|++..|+.... +++++..+ .....++.++.+|++++ ++++.++
T Consensus 23 ~aia~~la~~--G~~v~~~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 78 (257)
T PRK08594 23 WGIARSLHNA--GAKLVFTYAGERLE---KEVRELAD-------------TLEGQESLLLPCDVTSD------EEITACF 78 (257)
T ss_pred HHHHHHHHHC--CCEEEEecCcccch---HHHHHHHH-------------HcCCCceEEEecCCCCH------HHHHHHH
Confidence 3688999988 99999888753222 23332211 00124678899999987 4555444
Q ss_pred c-------CccEEEEcccccCc--------c---hhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------D---DYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~---~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|++||+||.... . ..+...+++|+.+...+.+++... ..-.++|++||..+...
T Consensus 79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~---- 154 (257)
T PRK08594 79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV---- 154 (257)
T ss_pred HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC----
Confidence 2 58999999986421 1 123456788999988888776642 12247999999765211
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.....
T Consensus 155 ------~~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~ 200 (257)
T PRK08594 155 ------VQ----------------------------NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAK 200 (257)
T ss_pred ------CC----------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHh
Confidence 01 016899999999999887765 5899999999977432100
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
........... .... .+ ..-+...+|++.+++.++...... ..+..+.+.++
T Consensus 201 -------~~~~~~~~~~~-~~~~------~p--~~r~~~p~~va~~~~~l~s~~~~~--~tG~~~~~dgg 252 (257)
T PRK08594 201 -------GVGGFNSILKE-IEER------AP--LRRTTTQEEVGDTAAFLFSDLSRG--VTGENIHVDSG 252 (257)
T ss_pred -------hhccccHHHHH-Hhhc------CC--ccccCCHHHHHHHHHHHcCccccc--ccceEEEECCc
Confidence 00000010000 0100 01 123567899999999888654321 13556666544
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.4e-08 Score=87.81 Aligned_cols=204 Identities=13% Similarity=0.058 Sum_probs=124.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|++..|+. +..+++.+..+ +...+ .++.+|+++. +++..+++
T Consensus 22 aiA~~la~~--G~~Vil~~r~~---~~~~~~~~~~~--------------~~~~~-~~~~~Dv~d~------~~v~~~~~ 75 (274)
T PRK08415 22 GIAKACFEQ--GAELAFTYLNE---ALKKRVEPIAQ--------------ELGSD-YVYELDVSKP------EHFKSLAE 75 (274)
T ss_pred HHHHHHHHC--CCEEEEEecCH---HHHHHHHHHHH--------------hcCCc-eEEEecCCCH------HHHHHHHH
Confidence 578899988 99999888852 12233333211 11123 5788999987 45555443
Q ss_pred -------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.+|++||+||.... ...++..+++|+.|...+.+++... ..-.++|++||.++...
T Consensus 76 ~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~----- 150 (274)
T PRK08415 76 SLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY----- 150 (274)
T ss_pred HHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC-----
Confidence 58999999996421 1335568999999999888877642 12258999999654221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.|. ...|+.||.+.+.+.+..+. +|+.+..+.||.|-.....
T Consensus 151 -----~~~----------------------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~- 196 (274)
T PRK08415 151 -----VPH----------------------------YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAAS- 196 (274)
T ss_pred -----CCc----------------------------chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHh-
Confidence 010 16799999999988887765 5789999999977432110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ............. .+ ..-+...+|+|.+++.++...... ..+..+.+.++
T Consensus 197 ------~~-~~~~~~~~~~~~~---~p-----l~r~~~pedva~~v~fL~s~~~~~--itG~~i~vdGG 248 (274)
T PRK08415 197 ------GI-GDFRMILKWNEIN---AP-----LKKNVSIEEVGNSGMYLLSDLSSG--VTGEIHYVDAG 248 (274)
T ss_pred ------cc-chhhHHhhhhhhh---Cc-----hhccCCHHHHHHHHHHHhhhhhhc--ccccEEEEcCc
Confidence 00 0000000111000 01 112567899999999888753321 13566666555
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.3e-08 Score=86.74 Aligned_cols=183 Identities=9% Similarity=-0.038 Sum_probs=119.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. ++.+.. .. .+++++.+|++++ +++..++
T Consensus 14 ~~ia~~l~~~--g~~v~~~~r~~~------~~~~~~--------------~~--~~~~~~~~D~~~~------~~v~~~~ 63 (223)
T PRK05884 14 RTIAEGFRND--GHKVTLVGARRD------DLEVAA--------------KE--LDVDAIVCDNTDP------ASLEEAR 63 (223)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------Hh--ccCcEEecCCCCH------HHHHHHH
Confidence 3688899887 999999998532 222111 00 1456789999886 4666555
Q ss_pred c----CccEEEEcccccC---------c---chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccc
Q psy7539 81 E----TIHIVYHIAATVR---------F---DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~----~~d~Vih~Aa~~~---------~---~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|++||+||... . ...+...+++|+.++..+++++... ..-.++|++||... .
T Consensus 64 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--~------ 135 (223)
T PRK05884 64 GLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--P------ 135 (223)
T ss_pred HHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--C------
Confidence 4 5899999997420 1 1335568999999999999988652 12258999998541 0
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.. ..|+.||.+.+.+.+.... +|+++..+.||.+..+.
T Consensus 136 -----~~-----------------------------~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~---- 177 (223)
T PRK05884 136 -----AG-----------------------------SAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG---- 177 (223)
T ss_pred -----Cc-----------------------------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh----
Confidence 00 7899999999999877755 57899999999662210
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... . . . +.-..+|++.++..++...... ..+..+.+.++
T Consensus 178 -------------~~~~-~-~------~-----p~~~~~~ia~~~~~l~s~~~~~--v~G~~i~vdgg 217 (223)
T PRK05884 178 -------------YDGL-S-R------T-----PPPVAAEIARLALFLTTPAARH--ITGQTLHVSHG 217 (223)
T ss_pred -------------hhhc-c-C------C-----CCCCHHHHHHHHHHHcCchhhc--cCCcEEEeCCC
Confidence 0000 0 0 0 1126799999999887653321 13566666554
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.93 E-value=6.1e-08 Score=87.13 Aligned_cols=155 Identities=11% Similarity=0.117 Sum_probs=99.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHH---
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQ--- 77 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~--- 77 (318)
++++++|+++ |++|+++.|+.+ ..+.+.+.++ . .....++..+.+|+++. . .+...
T Consensus 67 ~alA~~La~~--G~~Vil~~R~~~---~l~~~~~~l~--------~----~~~~~~~~~~~~Dl~~~-~---~~~~~~l~ 125 (320)
T PLN02780 67 KGFAFQLARK--GLNLVLVARNPD---KLKDVSDSIQ--------S----KYSKTQIKTVVVDFSGD-I---DEGVKRIK 125 (320)
T ss_pred HHHHHHHHHC--CCCEEEEECCHH---HHHHHHHHHH--------H----HCCCcEEEEEEEECCCC-c---HHHHHHHH
Confidence 4688999988 999999999632 1122211111 0 00013577788999742 1 12233
Q ss_pred HHhc--CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 78 MLSE--TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 78 ~~~~--~~d~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+.+. ++|++||+||.... .+.....+++|+.|+..+.+++... .+..++|++||..+....
T Consensus 126 ~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----- 200 (320)
T PLN02780 126 ETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP----- 200 (320)
T ss_pred HHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC-----
Confidence 3333 46699999997421 1234568999999999988886531 245689999997653210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII 212 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~ 212 (318)
..|. ...|+.||.+.+.+.+.... .|+.++++.||.|-
T Consensus 201 ---~~p~----------------------------~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~ 242 (320)
T PLN02780 201 ---SDPL----------------------------YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVA 242 (320)
T ss_pred ---CCcc----------------------------chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCcee
Confidence 0010 17899999999998887754 58999999999773
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=3e-08 Score=86.56 Aligned_cols=217 Identities=11% Similarity=0.012 Sum_probs=123.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... .+.+.+.+. . .....++.++.+|+++. +++..++
T Consensus 22 ~~ia~~l~~~--G~~V~~~~r~~~~---~~~~~~~~~--------~----~~~~~~~~~~~~D~~~~------~~v~~~~ 78 (265)
T PRK07062 22 LATVELLLEA--GASVAICGRDEER---LASAEARLR--------E----KFPGARLLAARCDVLDE------ADVAAFA 78 (265)
T ss_pred HHHHHHHHHC--CCeEEEEeCCHHH---HHHHHHHHH--------h----hCCCceEEEEEecCCCH------HHHHHHH
Confidence 3688899988 9999999996321 111111110 0 00123688899999986 4555443
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
..+|++||+||.... ...+...+++|+.+...+.+++... .+..++|++||..+....
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 153 (265)
T PRK07062 79 AAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE----- 153 (265)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC-----
Confidence 257999999996421 1234567888888776666554321 234689999997653321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
|. ...|+.+|.+.+.+.+.... .|+++..++||.+-.+.....
T Consensus 154 -----~~----------------------------~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~ 200 (265)
T PRK07062 154 -----PH----------------------------MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRR 200 (265)
T ss_pred -----CC----------------------------chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhH
Confidence 00 16799999988877766544 589999999997743211000
Q ss_pred CC-cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PG-WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ..........+....... ..-...-+...+|+|.++..++...... ..+.++.+.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~-------~~~p~~r~~~p~~va~~~~~L~s~~~~~--~tG~~i~vdgg 260 (265)
T PRK07062 201 YEARADPGQSWEAWTAALARK-------KGIPLGRLGRPDEAARALFFLASPLSSY--TTGSHIDVSGG 260 (265)
T ss_pred HHHhhccCCChHHHHHHHhhc-------CCCCcCCCCCHHHHHHHHHHHhCchhcc--cccceEEEcCc
Confidence 00 000000000111111100 0001123667899999999887643221 13667777655
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.5e-08 Score=85.95 Aligned_cols=204 Identities=9% Similarity=0.020 Sum_probs=126.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|++..|+ ....+++++..+ . .....++.+|++++ ++++.+++
T Consensus 27 aia~~la~~--G~~V~l~~r~---~~~~~~~~~l~~--------------~-~~~~~~~~~Dl~~~------~~v~~~~~ 80 (272)
T PRK08159 27 GIAKACRAA--GAELAFTYQG---DALKKRVEPLAA--------------E-LGAFVAGHCDVTDE------ASIDAVFE 80 (272)
T ss_pred HHHHHHHHC--CCEEEEEcCc---hHHHHHHHHHHH--------------h-cCCceEEecCCCCH------HHHHHHHH
Confidence 678899988 9999887774 222334443311 1 12345789999986 45655443
Q ss_pred -------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.+|++||+||.... ...+...+++|+.++..+++++... .+-.++|++||......
T Consensus 81 ~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~----- 155 (272)
T PRK08159 81 TLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV----- 155 (272)
T ss_pred HHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC-----
Confidence 58999999996421 1235568899999999999887653 12258899998654211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.|. ...|+.||.+.+.+.+.... +|+++..+.||.+-.....
T Consensus 156 -----~p~----------------------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~- 201 (272)
T PRK08159 156 -----MPH----------------------------YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAAS- 201 (272)
T ss_pred -----CCc----------------------------chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHh-
Confidence 010 16899999999988877654 5799999999977432110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..... .......... .+ ..-+...+|+|++++.++...... ..+..+.+.++
T Consensus 202 ------~~~~~-~~~~~~~~~~---~p-----~~r~~~peevA~~~~~L~s~~~~~--itG~~i~vdgG 253 (272)
T PRK08159 202 ------GIGDF-RYILKWNEYN---AP-----LRRTVTIEEVGDSALYLLSDLSRG--VTGEVHHVDSG 253 (272)
T ss_pred ------cCCcc-hHHHHHHHhC---Cc-----ccccCCHHHHHHHHHHHhCccccC--ccceEEEECCC
Confidence 00000 0111111100 00 112567899999999988654321 23667777666
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.88 E-value=4.9e-08 Score=84.86 Aligned_cols=152 Identities=11% Similarity=0.037 Sum_probs=97.0
Q ss_pred hhHHHHHhh--CCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 2 VLLEKILRT--CENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 2 ~l~~~Ll~~--~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
+++++|+++ ..|.+|+++.|+... .+.+.+.+. . .....++.++.+|++++ ++++.+
T Consensus 15 ~~a~~la~~~~~~g~~V~~~~r~~~~---~~~~~~~l~--------~----~~~~~~v~~~~~Dl~~~------~~v~~~ 73 (256)
T TIGR01500 15 TIAQELAKCLKSPGSVLVLSARNDEA---LRQLKAEIG--------A----ERSGLRVVRVSLDLGAE------AGLEQL 73 (256)
T ss_pred HHHHHHHHhhccCCcEEEEEEcCHHH---HHHHHHHHH--------h----cCCCceEEEEEeccCCH------HHHHHH
Confidence 567777761 138899999996321 111111110 0 00123688899999986 455554
Q ss_pred hcC-----------ccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhc----CC-CccEEEEeccc
Q psy7539 80 SET-----------IHIVYHIAATVRF----------DDYMQTYVFLNTRGTRDMLNLSKQM----IH-LQLFVYVSTAY 133 (318)
Q Consensus 80 ~~~-----------~d~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~-~~~~v~~SS~~ 133 (318)
++. .|+|||+||.... ...+...+++|+.|+..+.+++... ++ ..++|++||..
T Consensus 74 ~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~ 153 (256)
T TIGR01500 74 LKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLC 153 (256)
T ss_pred HHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHH
Confidence 431 2689999996311 1234568999999988877766432 11 24799999976
Q ss_pred cccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccc
Q psy7539 134 CHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPS 209 (318)
Q Consensus 134 ~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~ 209 (318)
+.... | ....|+.||.+.+.+.+.+.. .|+.+..+.||
T Consensus 154 ~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG 195 (256)
T TIGR01500 154 AIQPF----------K----------------------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPG 195 (256)
T ss_pred hCCCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 53210 1 016899999999999887654 57899999999
Q ss_pred ccc
Q psy7539 210 III 212 (318)
Q Consensus 210 ~v~ 212 (318)
.+-
T Consensus 196 ~v~ 198 (256)
T TIGR01500 196 VLD 198 (256)
T ss_pred ccc
Confidence 773
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.1e-08 Score=93.33 Aligned_cols=144 Identities=18% Similarity=0.163 Sum_probs=99.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+... +.+.+.. .. -+..++.+|++++ +++..+++
T Consensus 225 ~la~~l~~~--Ga~vi~~~~~~~~----~~l~~~~--------------~~--~~~~~~~~Dv~~~------~~~~~~~~ 276 (450)
T PRK08261 225 AIAEVLARD--GAHVVCLDVPAAG----EALAAVA--------------NR--VGGTALALDITAP------DAPARIAE 276 (450)
T ss_pred HHHHHHHHC--CCEEEEEeCCccH----HHHHHHH--------------HH--cCCeEEEEeCCCH------HHHHHHHH
Confidence 577888887 8999999884322 1222111 00 1335788999876 45554443
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
++|+|||+||.... ...++..+++|+.|+.++.+++... ..-.+||++||..+....
T Consensus 277 ~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~------ 350 (450)
T PRK08261 277 HLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN------ 350 (450)
T ss_pred HHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC------
Confidence 58999999997532 2345678899999999999998752 122589999997653211
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
+ ....|+.+|...+.++..+.. +|+.+..+.||.+
T Consensus 351 ----~----------------------------~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i 389 (450)
T PRK08261 351 ----R----------------------------GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFI 389 (450)
T ss_pred ----C----------------------------CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcC
Confidence 0 017899999988888776654 5899999999976
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.6e-08 Score=86.14 Aligned_cols=147 Identities=10% Similarity=0.044 Sum_probs=97.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|... +.+.+.. .....+++++.+|++++ +++..++
T Consensus 15 ~~ia~~l~~~--g~~V~~~~r~~~-----~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 67 (251)
T PRK06924 15 EAIANQLLEK--GTHVISISRTEN-----KELTKLA--------------EQYNSNLTFHSLDLQDV------HELETNF 67 (251)
T ss_pred HHHHHHHHhc--CCEEEEEeCCch-----HHHHHHH--------------hccCCceEEEEecCCCH------HHHHHHH
Confidence 3688999988 899999998642 1222211 11234788999999986 4666555
Q ss_pred cCc-----------cEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccC
Q psy7539 81 ETI-----------HIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPK 137 (318)
Q Consensus 81 ~~~-----------d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~ 137 (318)
+.+ .++||+||.... ...+...+++|+.+...+++.+. +.....+||++||..+...
T Consensus 68 ~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 147 (251)
T PRK06924 68 NEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP 147 (251)
T ss_pred HHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC
Confidence 421 278999987422 12345678889888666555443 3223458999999665321
Q ss_pred CcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEeccccc
Q psy7539 138 EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSII 211 (318)
Q Consensus 138 ~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v 211 (318)
..+. ..|+.+|.+.+.+++.++. .++++..++||.+
T Consensus 148 ---------~~~~-----------------------------~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v 189 (251)
T PRK06924 148 ---------YFGW-----------------------------SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVM 189 (251)
T ss_pred ---------CCCc-----------------------------HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCcc
Confidence 0111 7899999999999987653 3688999999966
Q ss_pred c
Q psy7539 212 I 212 (318)
Q Consensus 212 ~ 212 (318)
-
T Consensus 190 ~ 190 (251)
T PRK06924 190 D 190 (251)
T ss_pred c
Confidence 3
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=9e-08 Score=83.46 Aligned_cols=204 Identities=11% Similarity=0.012 Sum_probs=124.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|++. |++|++..|.. ...+++.+..+ .. ....++.+|++++ ++++.+++
T Consensus 23 a~a~~l~~~--G~~v~~~~~~~---~~~~~~~~~~~--------------~~-~~~~~~~~Dv~d~------~~v~~~~~ 76 (260)
T PRK06997 23 GIAKACKRE--GAELAFTYVGD---RFKDRITEFAA--------------EF-GSDLVFPCDVASD------EQIDALFA 76 (260)
T ss_pred HHHHHHHHC--CCeEEEEccch---HHHHHHHHHHH--------------hc-CCcceeeccCCCH------HHHHHHHH
Confidence 678899988 99998876642 12233333211 11 1234678999987 46665543
Q ss_pred -------CccEEEEcccccCc------------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccc
Q psy7539 82 -------TIHIVYHIAATVRF------------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~ 141 (318)
.+|++||+||.... ...++..+++|+.+...+.+++... .+-.++|++||..+...
T Consensus 77 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~---- 152 (260)
T PRK06997 77 SLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV---- 152 (260)
T ss_pred HHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC----
Confidence 58999999997421 1234457889999999888887643 12257999999654211
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.....
T Consensus 153 ------~~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~ 198 (260)
T PRK06997 153 ------VP----------------------------NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAAS 198 (260)
T ss_pred ------CC----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhc
Confidence 01 016799999999998887765 5799999999977331100
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+.........+.. . . + ..-+...+|+++++..++...... ..+..+.+.++
T Consensus 199 -------~~~~~~~~~~~~~~-~---~---p--~~r~~~pedva~~~~~l~s~~~~~--itG~~i~vdgg 250 (260)
T PRK06997 199 -------GIKDFGKILDFVES-N---A---P--LRRNVTIEEVGNVAAFLLSDLASG--VTGEITHVDSG 250 (260)
T ss_pred -------cccchhhHHHHHHh-c---C---c--ccccCCHHHHHHHHHHHhCccccC--cceeEEEEcCC
Confidence 01000111111111 0 0 1 113577899999999988754321 13666766554
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.7e-07 Score=76.14 Aligned_cols=192 Identities=15% Similarity=0.144 Sum_probs=115.2
Q ss_pred hHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh--
Q psy7539 3 LLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS-- 80 (318)
Q Consensus 3 l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~-- 80 (318)
||++|++. +++++++..|+...+. .+.++.. ....+++++++.|++.. +++..+.
T Consensus 19 LVk~llk~-~~i~~iiat~r~~e~a-~~~l~~k---------------~~~d~rvHii~Ldvt~d------eS~~~~~~~ 75 (249)
T KOG1611|consen 19 LVKELLKD-KGIEVIIATARDPEKA-ATELALK---------------SKSDSRVHIIQLDVTCD------ESIDNFVQE 75 (249)
T ss_pred HHHHHhcC-CCcEEEEEecCChHHh-hHHHHHh---------------hccCCceEEEEEecccH------HHHHHHHHH
Confidence 79999988 8897666666533332 1111110 23357999999999875 3454433
Q ss_pred -------cCccEEEEcccccC-c-------chhHHHHHHHhHHHHHHHHHHH----HhcC----------CCccEEEEec
Q psy7539 81 -------ETIHIVYHIAATVR-F-------DDYMQTYVFLNTRGTRDMLNLS----KQMI----------HLQLFVYVST 131 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~----------~~~~~v~~SS 131 (318)
++.+.+|++||... + ....-+.+++|..|+..+.+.+ ++.. +...+|++||
T Consensus 76 V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS 155 (249)
T KOG1611|consen 76 VEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISS 155 (249)
T ss_pred HHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeec
Confidence 36789999999741 1 1224457899988877666544 2210 1227898999
Q ss_pred cccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEeccc
Q psy7539 132 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPS 209 (318)
Q Consensus 132 ~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~ 209 (318)
....... ..+.+. .+|..||.+...+.+...- ...++.++-.+
T Consensus 156 ~~~s~~~------~~~~~~-----------------------------~AYrmSKaAlN~f~ksls~dL~~~~ilv~sih 200 (249)
T KOG1611|consen 156 SAGSIGG------FRPGGL-----------------------------SAYRMSKAALNMFAKSLSVDLKDDHILVVSIH 200 (249)
T ss_pred cccccCC------CCCcch-----------------------------hhhHhhHHHHHHHHHHhhhhhcCCcEEEEEec
Confidence 6543211 111221 8999999999988877654 33344443333
Q ss_pred ccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEee
Q psy7539 210 IIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 285 (318)
Q Consensus 210 ~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~ 285 (318)
|||+..-+| +.-..+.+++-+..++..+.+-.. +..+..||-.
T Consensus 201 ----------PGwV~TDMg---------------------g~~a~ltveeSts~l~~~i~kL~~--~hnG~ffn~d 243 (249)
T KOG1611|consen 201 ----------PGWVQTDMG---------------------GKKAALTVEESTSKLLASINKLKN--EHNGGFFNRD 243 (249)
T ss_pred ----------CCeEEcCCC---------------------CCCcccchhhhHHHHHHHHHhcCc--ccCcceEccC
Confidence 444444333 133556777778888877766333 2346777653
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.3e-07 Score=82.62 Aligned_cols=204 Identities=12% Similarity=0.052 Sum_probs=123.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|++. |++|++..|+. ...+.+++.. ...++..++.+|++++ ++++.+++
T Consensus 23 aia~~la~~--G~~vil~~r~~---~~~~~~~~~~---------------~~~~~~~~~~~Dl~~~------~~v~~~~~ 76 (262)
T PRK07984 23 GIAQAMHRE--GAELAFTYQND---KLKGRVEEFA---------------AQLGSDIVLPCDVAED------ASIDAMFA 76 (262)
T ss_pred HHHHHHHHC--CCEEEEEecch---hHHHHHHHHH---------------hccCCceEeecCCCCH------HHHHHHHH
Confidence 678899988 89988877741 2222333221 1113456789999987 46665543
Q ss_pred -------CccEEEEcccccCc------------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccc
Q psy7539 82 -------TIHIVYHIAATVRF------------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~ 141 (318)
.+|++||+||.... ...++..+++|+.|...+.+++..+ ..-.++|++||.+....
T Consensus 77 ~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~---- 152 (262)
T PRK07984 77 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA---- 152 (262)
T ss_pred HHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC----
Confidence 57999999996421 1233457788999988888776542 11247899998654211
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.| ....|+.||.+.+.+.+..+. +|+.+..+.||.+-.....
T Consensus 153 ------~~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~ 198 (262)
T PRK07984 153 ------IP----------------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 198 (262)
T ss_pred ------CC----------------------------CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh
Confidence 01 016899999999999887765 5799999999977331100
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.............. . .+ ..-+...+|++.+++.++...... ..+..+.+.++
T Consensus 199 -------~~~~~~~~~~~~~~-~---~p-----~~r~~~pedva~~~~~L~s~~~~~--itG~~i~vdgg 250 (262)
T PRK07984 199 -------GIKDFRKMLAHCEA-V---TP-----IRRTVTIEDVGNSAAFLCSDLSAG--ISGEVVHVDGG 250 (262)
T ss_pred -------cCCchHHHHHHHHH-c---CC-----CcCCCCHHHHHHHHHHHcCccccc--ccCcEEEECCC
Confidence 00000011111111 0 01 123578899999999988653321 13556666554
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.9e-07 Score=78.13 Aligned_cols=204 Identities=12% Similarity=0.031 Sum_probs=122.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
+++++|+++ |++|++..|+... +..+.+. .....++.++.+|++++ ++++.++
T Consensus 24 a~a~~la~~--G~~v~l~~r~~~~-~~~~~~~-----------------~~~~~~~~~~~~Dv~~~------~~i~~~~~ 77 (256)
T PRK07889 24 HVARVAQEQ--GAEVVLTGFGRAL-RLTERIA-----------------KRLPEPAPVLELDVTNE------EHLASLAD 77 (256)
T ss_pred HHHHHHHHC--CCEEEEecCccch-hHHHHHH-----------------HhcCCCCcEEeCCCCCH------HHHHHHHH
Confidence 578889888 9999999885321 1111121 11123577899999986 4555443
Q ss_pred ------cCccEEEEcccccCc--------c---hhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccc
Q psy7539 81 ------ETIHIVYHIAATVRF--------D---DYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~~~--------~---~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.++|++||+||.... . +.....+++|+.++..+.+++... ..-.++|++|+....+
T Consensus 78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~------ 151 (256)
T PRK07889 78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA------ 151 (256)
T ss_pred HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc------
Confidence 268999999997421 1 223457899999998888877642 1124788887642211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.| ....|+.||...+.+.+..+. +|+++..+.||.+-.+...
T Consensus 152 -----~~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~- 197 (256)
T PRK07889 152 -----WP----------------------------AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAK- 197 (256)
T ss_pred -----CC----------------------------ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhh-
Confidence 00 016799999999988877654 5799999999977432111
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+.+.......+... .+ ..+.+...+|+|++++.++...... ..+.++.+.++
T Consensus 198 ------~~~~~~~~~~~~~~~----~p----~~~~~~~p~evA~~v~~l~s~~~~~--~tG~~i~vdgg 250 (256)
T PRK07889 198 ------AIPGFELLEEGWDER----AP----LGWDVKDPTPVARAVVALLSDWFPA--TTGEIVHVDGG 250 (256)
T ss_pred ------cccCcHHHHHHHHhc----Cc----cccccCCHHHHHHHHHHHhCccccc--ccceEEEEcCc
Confidence 111101111111110 00 1113678899999999988754321 13566666544
|
|
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.8e-08 Score=79.56 Aligned_cols=145 Identities=19% Similarity=0.198 Sum_probs=107.9
Q ss_pred hhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
-|+++++.. +-. +|+++.|++... +.-..++.....|.++- +++..-+
T Consensus 33 ~llk~~~E~-~~FSKV~~i~RR~~~d------------------------~at~k~v~q~~vDf~Kl------~~~a~~~ 81 (238)
T KOG4039|consen 33 GLLKHAQEA-PQFSKVYAILRRELPD------------------------PATDKVVAQVEVDFSKL------SQLATNE 81 (238)
T ss_pred HHHHHHHhc-ccceeEEEEEeccCCC------------------------ccccceeeeEEechHHH------HHHHhhh
Confidence 367777777 666 999999986432 33345677788888764 4677777
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|+.|-+-|.+....-.+-++.+.-.-...+.++|++ ++++.|+.+||.++.....
T Consensus 82 qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe-~Gck~fvLvSS~GAd~sSr--------------------- 139 (238)
T KOG4039|consen 82 QGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKE-KGCKTFVLVSSAGADPSSR--------------------- 139 (238)
T ss_pred cCCceEEEeecccccccccCceEeechHHHHHHHHHHHh-CCCeEEEEEeccCCCcccc---------------------
Confidence 899999999988766555555666666667788899998 5999999999987633210
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCC-cEEEecccccccccCCCCCC
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGM-PCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~g 221 (318)
-.|-..|-..|+-+.+. +| .++|+|||.+.|...+..+|
T Consensus 140 -------------------FlY~k~KGEvE~~v~eL---~F~~~~i~RPG~ll~~R~esr~g 179 (238)
T KOG4039|consen 140 -------------------FLYMKMKGEVERDVIEL---DFKHIIILRPGPLLGERTESRQG 179 (238)
T ss_pred -------------------eeeeeccchhhhhhhhc---cccEEEEecCcceeccccccccc
Confidence 57888898888877765 44 68999999999987655433
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.7e-07 Score=78.12 Aligned_cols=180 Identities=12% Similarity=0.067 Sum_probs=114.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH-
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML- 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~- 79 (318)
++++++|+++..++.|+...|..... ....++.++.+|++++ +++..+
T Consensus 14 ~~ia~~l~~~~~~~~v~~~~~~~~~~-------------------------~~~~~~~~~~~Dls~~------~~~~~~~ 62 (235)
T PRK09009 14 KAMVKQLLERYPDATVHATYRHHKPD-------------------------FQHDNVQWHALDVTDE------AEIKQLS 62 (235)
T ss_pred HHHHHHHHHhCCCCEEEEEccCCccc-------------------------cccCceEEEEecCCCH------HHHHHHH
Confidence 36788898873456777766643211 1124788999999986 344443
Q ss_pred --hcCccEEEEcccccCcc-------------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccc
Q psy7539 80 --SETIHIVYHIAATVRFD-------------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 80 --~~~~d~Vih~Aa~~~~~-------------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+.++|+|||+||..... ..+...+++|+.++..+.+.+... .+..+++++||..+...
T Consensus 63 ~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~---- 138 (235)
T PRK09009 63 EQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSIS---- 138 (235)
T ss_pred HhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccc----
Confidence 34799999999975311 223457888999988888777542 12357899988433110
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEeccccccccc
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G~~ 215 (318)
+.. ..+. ..|+.+|.+.+.++..... .++.+..+.||.+....
T Consensus 139 -~~~-~~~~-----------------------------~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~ 187 (235)
T PRK09009 139 -DNR-LGGW-----------------------------YSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTAL 187 (235)
T ss_pred -cCC-CCCc-----------------------------chhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCC
Confidence 000 0010 6899999999998887664 26778889998764421
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
. .. +.. .. ....+...+|+|+.++.++....
T Consensus 188 ~-----------~~------~~~----~~-----~~~~~~~~~~~a~~~~~l~~~~~ 218 (235)
T PRK09009 188 S-----------KP------FQQ----NV-----PKGKLFTPEYVAQCLLGIIANAT 218 (235)
T ss_pred C-----------cc------hhh----cc-----ccCCCCCHHHHHHHHHHHHHcCC
Confidence 1 00 000 00 11235788999999999988754
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.1e-07 Score=83.36 Aligned_cols=204 Identities=8% Similarity=0.043 Sum_probs=123.8
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|++. |++|++..|+. ...+++.+... .. ....++.+|++++ ++++.+++
T Consensus 24 aiA~~la~~--Ga~V~~~~r~~---~~~~~~~~~~~--------------~~-g~~~~~~~Dv~d~------~~v~~~~~ 77 (271)
T PRK06505 24 GIAKQLAAQ--GAELAFTYQGE---ALGKRVKPLAE--------------SL-GSDFVLPCDVEDI------ASVDAVFE 77 (271)
T ss_pred HHHHHHHhC--CCEEEEecCch---HHHHHHHHHHH--------------hc-CCceEEeCCCCCH------HHHHHHHH
Confidence 678899988 99999888752 12223332211 01 1234688999986 45555443
Q ss_pred -------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.+|++||+||.... ...++..+++|+.++.++++++... ..-.++|++||..+...
T Consensus 78 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~----- 152 (271)
T PRK06505 78 ALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV----- 152 (271)
T ss_pred HHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc-----
Confidence 68999999996421 1234567889999999988877542 11247999999654221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.....
T Consensus 153 -----~~----------------------------~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~- 198 (271)
T PRK06505 153 -----MP----------------------------NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGA- 198 (271)
T ss_pred -----CC----------------------------ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccc-
Confidence 01 016899999999988877655 5899999999977442110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+...... ........ + ..-+...+|+|.+++.++...... ..+..+.+.++
T Consensus 199 ------~~~~~~~~-~~~~~~~~---p-----~~r~~~peeva~~~~fL~s~~~~~--itG~~i~vdgG 250 (271)
T PRK06505 199 ------GIGDARAI-FSYQQRNS---P-----LRRTVTIDEVGGSALYLLSDLSSG--VTGEIHFVDSG 250 (271)
T ss_pred ------cCcchHHH-HHHHhhcC---C-----ccccCCHHHHHHHHHHHhCccccc--cCceEEeecCC
Confidence 11010011 11111110 1 012456799999999988643321 13667777665
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.2e-07 Score=82.50 Aligned_cols=148 Identities=14% Similarity=0.139 Sum_probs=95.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ . ...++.++.+|++++ +++..++
T Consensus 14 ~aia~~l~~~--G~~V~~~~r~~~---~~~~~~~~l--------------~-~~~~~~~~~~Dv~d~------~~~~~~~ 67 (259)
T PRK08340 14 FNVARELLKK--GARVVISSRNEE---NLEKALKEL--------------K-EYGEVYAVKADLSDK------DDLKNLV 67 (259)
T ss_pred HHHHHHHHHc--CCEEEEEeCCHH---HHHHHHHHH--------------H-hcCCceEEEcCCCCH------HHHHHHH
Confidence 3678899988 999999988532 111111111 1 113678899999986 4555554
Q ss_pred -------cCccEEEEcccccCc------c---hhHHHHHHHhHHHHHHHHHH----HHhcCCCccEEEEeccccccCCcc
Q psy7539 81 -------ETIHIVYHIAATVRF------D---DYMQTYVFLNTRGTRDMLNL----SKQMIHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~------~---~~~~~~~~~Nv~gt~~ll~~----a~~~~~~~~~v~~SS~~~~~~~~~ 140 (318)
.++|+|||+||.... . ..+...+.+|+.++..+... +.+..+..+||++||..+....
T Consensus 68 ~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~-- 145 (259)
T PRK08340 68 KEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM-- 145 (259)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC--
Confidence 368999999996421 1 12234566787775554433 2211234589999997653210
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII 212 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~ 212 (318)
++. ..|+.+|...+.+.+..+. +|+.+..+.||.+-
T Consensus 146 -------~~~-----------------------------~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~ 185 (259)
T PRK08340 146 -------PPL-----------------------------VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFD 185 (259)
T ss_pred -------CCc-----------------------------hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCccc
Confidence 011 6899999999999888765 47888889998663
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.81 E-value=5.8e-08 Score=78.46 Aligned_cols=136 Identities=18% Similarity=0.157 Sum_probs=95.6
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
.++++|+++ .+.+|+++.|+ ...+++.+..+ .+ .....++.++.+|++++ ++++.+++
T Consensus 15 ~~a~~l~~~-g~~~v~~~~r~----~~~~~~~~l~~-----~l------~~~~~~~~~~~~D~~~~------~~~~~~~~ 72 (167)
T PF00106_consen 15 ALARALARR-GARVVILTSRS----EDSEGAQELIQ-----EL------KAPGAKITFIECDLSDP------ESIRALIE 72 (167)
T ss_dssp HHHHHHHHT-TTEEEEEEESS----CHHHHHHHHHH-----HH------HHTTSEEEEEESETTSH------HHHHHHHH
T ss_pred HHHHHHHhc-CceEEEEeeec----ccccccccccc-----cc------ccccccccccccccccc------cccccccc
Confidence 578899988 33488888886 11222222211 11 22236899999999976 56665543
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCC
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
.+|++||+||.... .+.....+++|+.+...+.+++.. .+-.++|++||..+....
T Consensus 73 ~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~~--------- 142 (167)
T PF00106_consen 73 EVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIAGVRGS--------- 142 (167)
T ss_dssp HHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGGGTSSS---------
T ss_pred ccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchhhccCC---------
Confidence 68999999998641 133456899999999999999887 467899999997764321
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME 198 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 198 (318)
| ....|+.+|.+.+.+++..++
T Consensus 143 -~----------------------------~~~~Y~askaal~~~~~~la~ 164 (167)
T PF00106_consen 143 -P----------------------------GMSAYSASKAALRGLTQSLAA 164 (167)
T ss_dssp -T----------------------------TBHHHHHHHHHHHHHHHHHHH
T ss_pred -C----------------------------CChhHHHHHHHHHHHHHHHHH
Confidence 1 016899999999999887754
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=9.2e-07 Score=76.42 Aligned_cols=179 Identities=11% Similarity=0.023 Sum_probs=109.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
+++++|. + |.+|+++.|+.+. .+.+.+.+. .....++.++.+|++++ ++++.+.
T Consensus 15 aia~~l~-~--g~~Vil~~r~~~~---~~~~~~~l~-------------~~~~~~~~~~~~Dv~d~------~~v~~~~~ 69 (246)
T PRK05599 15 EIATLLC-H--GEDVVLAARRPEA---AQGLASDLR-------------QRGATSVHVLSFDAQDL------DTHRELVK 69 (246)
T ss_pred HHHHHHh-C--CCEEEEEeCCHHH---HHHHHHHHH-------------hccCCceEEEEcccCCH------HHHHHHHH
Confidence 5777876 5 7899999986321 111211111 11113578899999987 3454433
Q ss_pred ------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCccccc
Q psy7539 81 ------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
.++|++||+||..... ....+..++|+.+...++.++ .+...-.++|++||..+....
T Consensus 70 ~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----- 144 (246)
T PRK05599 70 QTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR----- 144 (246)
T ss_pred HHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC-----
Confidence 2689999999975321 112245677887776655443 331123589999997653210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||...+.+.+.... .|+.+..+.||.+.....
T Consensus 145 -----~----------------------------~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~--- 188 (246)
T PRK05599 145 -----R----------------------------ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT--- 188 (246)
T ss_pred -----c----------------------------CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh---
Confidence 0 016899999999888877654 578888999996633110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
.+..+ .. -....+|+|++++.++....
T Consensus 189 ------------------~~~~~-------~~-~~~~pe~~a~~~~~~~~~~~ 215 (246)
T PRK05599 189 ------------------TGMKP-------AP-MSVYPRDVAAAVVSAITSSK 215 (246)
T ss_pred ------------------cCCCC-------CC-CCCCHHHHHHHHHHHHhcCC
Confidence 00000 00 02467999999999988754
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.7e-07 Score=77.12 Aligned_cols=145 Identities=16% Similarity=0.210 Sum_probs=97.6
Q ss_pred hhHHHHHhhCCCc-EEEEEEcc-CCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 2 VLLEKILRTCENV-KIYILLRP-KKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~-~V~~l~R~-~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
.+++.|+++ +. +|+++.|+ .+.....+.+.++ .....++.++.+|++++ +++.++
T Consensus 15 ~la~~La~~--~~~~~il~~r~~~~~~~~~~~i~~l---------------~~~g~~v~~~~~Dv~d~------~~v~~~ 71 (181)
T PF08659_consen 15 SLARWLAER--GARRLILLGRSGAPSAEAEAAIREL---------------ESAGARVEYVQCDVTDP------EAVAAA 71 (181)
T ss_dssp HHHHHHHHT--T-SEEEEEESSGGGSTTHHHHHHHH---------------HHTT-EEEEEE--TTSH------HHHHHH
T ss_pred HHHHHHHHc--CCCEEEEeccCCCccHHHHHHHHHH---------------HhCCCceeeeccCccCH------HHHHHH
Confidence 577888888 55 99999998 4444544455444 22345899999999987 677777
Q ss_pred hc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecccc-ccCCcccccc
Q psy7539 80 SE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYC-HPKEKVLEEK 144 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~-~~~~~~~~E~ 144 (318)
++ .++.|||+|+.... .......+.+.+.|+.+|.++... ..+..||..||... .|..+
T Consensus 72 ~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~-~~l~~~i~~SSis~~~G~~g----- 145 (181)
T PF08659_consen 72 LAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN-RPLDFFILFSSISSLLGGPG----- 145 (181)
T ss_dssp HHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT-TTTSEEEEEEEHHHHTT-TT-----
T ss_pred HHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc-CCCCeEEEECChhHhccCcc-----
Confidence 64 46899999998522 123456788899999999999988 48899999999655 33211
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEeccc
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPS 209 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~ 209 (318)
...|+......+.+.......|.+++.+..+
T Consensus 146 ----------------------------------q~~YaaAN~~lda~a~~~~~~g~~~~sI~wg 176 (181)
T PF08659_consen 146 ----------------------------------QSAYAAANAFLDALARQRRSRGLPAVSINWG 176 (181)
T ss_dssp ----------------------------------BHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-
T ss_pred ----------------------------------hHhHHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 1789999888888887665578888888766
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.80 E-value=2e-07 Score=85.80 Aligned_cols=91 Identities=13% Similarity=0.080 Sum_probs=64.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|++. ++.... .....++..+.+|++++ +++...+
T Consensus 192 ~aLA~~La~~--G~~Vi~l~r~~~------~l~~~~--------------~~~~~~v~~v~~Dvsd~------~~v~~~l 243 (406)
T PRK07424 192 QALLKELHQQ--GAKVVALTSNSD------KITLEI--------------NGEDLPVKTLHWQVGQE------AALAELL 243 (406)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------hhcCCCeEEEEeeCCCH------HHHHHHh
Confidence 3678889887 999999988532 111110 00112467788999886 5777778
Q ss_pred cCccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQ 119 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~ 119 (318)
.++|++||+||.... .+..+..+++|+.|+.++++++..
T Consensus 244 ~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 244 EKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999986421 123467899999999999998754
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.8e-07 Score=78.78 Aligned_cols=89 Identities=13% Similarity=0.060 Sum_probs=63.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... +... .. ....++.+|+++. +++...+
T Consensus 28 ~ala~~l~~~--G~~Vi~~~r~~~~~-----~~~~---------------~~--~~~~~~~~D~~~~------~~~~~~~ 77 (245)
T PRK12367 28 KALTKAFRAK--GAKVIGLTHSKINN-----SESN---------------DE--SPNEWIKWECGKE------ESLDKQL 77 (245)
T ss_pred HHHHHHHHHC--CCEEEEEECCchhh-----hhhh---------------cc--CCCeEEEeeCCCH------HHHHHhc
Confidence 3678899888 99999999864111 1100 10 1125678999876 5677777
Q ss_pred cCccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQ 119 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~ 119 (318)
.++|++||+||.... .+.+...+++|+.|+.++++++..
T Consensus 78 ~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 78 ASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred CCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 889999999997421 234567899999999999998764
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.4e-07 Score=90.64 Aligned_cols=146 Identities=12% Similarity=0.070 Sum_probs=102.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+.+ ++.+.. .....++.++.+|++++ +++..+++
T Consensus 20 aia~~l~~~--G~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~~ 71 (520)
T PRK06484 20 AACQRFARA--GDQVVVADRNVE------RARERA--------------DSLGPDHHALAMDVSDE------AQIREGFE 71 (520)
T ss_pred HHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------HHhCCceeEEEeccCCH------HHHHHHHH
Confidence 678899988 999999988532 222111 11224677899999987 45555443
Q ss_pred -------CccEEEEcccccC---------cchhHHHHHHHhHHHHHHHHHHHHhc---CCC-ccEEEEeccccccCCccc
Q psy7539 82 -------TIHIVYHIAATVR---------FDDYMQTYVFLNTRGTRDMLNLSKQM---IHL-QLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~-~~~v~~SS~~~~~~~~~~ 141 (318)
++|++||+||... ....++..+++|+.++..+++++... .+. .++|++||..+....
T Consensus 72 ~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~--- 148 (520)
T PRK06484 72 QLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL--- 148 (520)
T ss_pred HHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC---
Confidence 5899999998621 11335678999999999998887653 122 389999997653321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
| ....|+.+|.+.+.+.+.... .+++++.+.||.+-.
T Consensus 149 -------~----------------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t 189 (520)
T PRK06484 149 -------P----------------------------KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRT 189 (520)
T ss_pred -------C----------------------------CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCc
Confidence 0 017899999999998877654 479999999997743
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.7e-07 Score=84.07 Aligned_cols=174 Identities=13% Similarity=0.044 Sum_probs=99.0
Q ss_pred hhHHHHHhhCCC-cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCEN-VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~-~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++.|+++ | ++|+++.|+... . +.+.+.+ .....++.++.+|+++. +++..++
T Consensus 18 aia~~L~~~--G~~~V~l~~r~~~~--~-~~~~~~l--------------~~~~~~~~~~~~Dl~~~------~~v~~~~ 72 (314)
T TIGR01289 18 YAAKALAAT--GEWHVIMACRDFLK--A-EQAAKSL--------------GMPKDSYTIMHLDLGSL------DSVRQFV 72 (314)
T ss_pred HHHHHHHHc--CCCEEEEEeCCHHH--H-HHHHHHh--------------cCCCCeEEEEEcCCCCH------HHHHHHH
Confidence 678899988 8 899999986321 1 1111111 11124678899999986 3444433
Q ss_pred -------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHh----cC-CCccEEEEeccccccCC--
Q psy7539 81 -------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQ----MI-HLQLFVYVSTAYCHPKE-- 138 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~~~~~v~~SS~~~~~~~-- 138 (318)
.++|++||+||.... ...+...+++|+.|+..+.+++.. .+ +..+||++||..++...
T Consensus 73 ~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~ 152 (314)
T TIGR01289 73 QQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLA 152 (314)
T ss_pred HHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCC
Confidence 358999999996421 123456789999998777665543 11 13689999997664321
Q ss_pred ccc----ccccCCCC-CChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecc
Q psy7539 139 KVL----EEKTYPPP-VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRP 208 (318)
Q Consensus 139 ~~~----~E~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~ 208 (318)
..+ +....... .++..... .... ..+ .....|+.||++...+.....+ .|+.++.++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~------~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~P 220 (314)
T TIGR01289 153 GNVPPKANLGDLSGLAAGFKAPIA---MIDG---KEF------KGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYP 220 (314)
T ss_pred CcCCCcccccccccccccCCCccc---ccCC---CCc------chhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecC
Confidence 000 00000000 00000000 0000 000 0116799999997776665543 3688999999
Q ss_pred cccc
Q psy7539 209 SIII 212 (318)
Q Consensus 209 ~~v~ 212 (318)
|.|.
T Consensus 221 G~v~ 224 (314)
T TIGR01289 221 GCIA 224 (314)
T ss_pred Cccc
Confidence 9874
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.1e-07 Score=80.04 Aligned_cols=204 Identities=9% Similarity=0.025 Sum_probs=122.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|++..|+. ...+.+.++.+ .. ....++.+|++++ ++++.+++
T Consensus 25 a~a~~la~~--G~~v~~~~r~~---~~~~~~~~l~~--------------~~-g~~~~~~~Dv~~~------~~v~~~~~ 78 (260)
T PRK06603 25 AIAQLAKKH--GAELWFTYQSE---VLEKRVKPLAE--------------EI-GCNFVSELDVTNP------KSISNLFD 78 (260)
T ss_pred HHHHHHHHc--CCEEEEEeCch---HHHHHHHHHHH--------------hc-CCceEEEccCCCH------HHHHHHHH
Confidence 577888887 89988877742 12223332211 11 1223578999987 45555443
Q ss_pred -------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.+|++||+||.... ...+...+++|+.+...+++++... ..-.++|++||..+...
T Consensus 79 ~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~----- 153 (260)
T PRK06603 79 DIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV----- 153 (260)
T ss_pred HHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC-----
Confidence 58999999986321 1234568899999999988876532 12248999999654211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.| ....|+.||.+.+.+.+..+. +|+.+..+.||.+-.+...
T Consensus 154 -----~~----------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~- 199 (260)
T PRK06603 154 -----IP----------------------------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASS- 199 (260)
T ss_pred -----CC----------------------------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhh-
Confidence 01 017899999999988877665 5799999999977432110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
............... . + ..-+...+|+|+++..++...... ..+..+.+.++
T Consensus 200 ------~~~~~~~~~~~~~~~----~---p--~~r~~~pedva~~~~~L~s~~~~~--itG~~i~vdgG 251 (260)
T PRK06603 200 ------AIGDFSTMLKSHAAT----A---P--LKRNTTQEDVGGAAVYLFSELSKG--VTGEIHYVDCG 251 (260)
T ss_pred ------cCCCcHHHHHHHHhc----C---C--cCCCCCHHHHHHHHHHHhCccccc--CcceEEEeCCc
Confidence 000111111111110 0 1 112567899999999988653321 13566666554
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.6e-07 Score=83.93 Aligned_cols=109 Identities=13% Similarity=0.034 Sum_probs=70.7
Q ss_pred hhHHHHHhhCCC-cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCEN-VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~-~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++|+++ | ++|++..|+.. .. +.+.+.+ .....++.++.+|+++. +++..++
T Consensus 12 aia~~l~~~--G~~~V~~~~r~~~--~~-~~~~~~l--------------~~~~~~~~~~~~Dl~d~------~~v~~~~ 66 (308)
T PLN00015 12 ATAKALAET--GKWHVVMACRDFL--KA-ERAAKSA--------------GMPKDSYTVMHLDLASL------DSVRQFV 66 (308)
T ss_pred HHHHHHHHC--CCCEEEEEeCCHH--HH-HHHHHHh--------------cCCCCeEEEEEecCCCH------HHHHHHH
Confidence 578899988 8 79999988532 11 1111111 11124678889999986 4555443
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CC--CccEEEEeccccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IH--LQLFVYVSTAYCH 135 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~--~~~~v~~SS~~~~ 135 (318)
+ .+|++||+||.... ...++..+++|+.|+..+.+++... .+ ..++|++||..+.
T Consensus 67 ~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 67 DNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred HHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 2 58999999997421 1234568999999977776654431 12 3689999997653
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.1e-07 Score=76.20 Aligned_cols=147 Identities=11% Similarity=0.058 Sum_probs=94.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.+. .+.+.+.. .....++..+.+|++++ +++..++
T Consensus 19 ~aia~~la~~--G~~V~~~~r~~~~---l~~~~~~i--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 73 (227)
T PRK08862 19 RTISCHFARL--GATLILCDQDQSA---LKDTYEQC--------------SALTDNVYSFQLKDFSQ------ESIRHLF 73 (227)
T ss_pred HHHHHHHHHC--CCEEEEEcCCHHH---HHHHHHHH--------------HhcCCCeEEEEccCCCH------HHHHHHH
Confidence 3678899988 9999999885321 12211111 11124577788999876 4555443
Q ss_pred -------c-CccEEEEcccccCcc--------hhHHHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccCCcc
Q psy7539 81 -------E-TIHIVYHIAATVRFD--------DYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 -------~-~~d~Vih~Aa~~~~~--------~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~~~~ 140 (318)
. .+|++||+||..... ..+...++.|+.+...++..+. +.++-..+|++||..+...
T Consensus 74 ~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~--- 150 (227)
T PRK08862 74 DAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQD--- 150 (227)
T ss_pred HHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCC---
Confidence 3 689999999743111 2334466778777766655443 2112358999998543210
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
. ..|+.||.+.+.+.+..+. +++++..+.||.+-.
T Consensus 151 ---------~-----------------------------~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t 189 (227)
T PRK08862 151 ---------L-----------------------------TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSA 189 (227)
T ss_pred ---------c-----------------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcC
Confidence 0 6899999999988877654 579999999996633
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.6e-07 Score=80.92 Aligned_cols=204 Identities=16% Similarity=0.121 Sum_probs=129.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH--
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML-- 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~-- 79 (318)
+++++|+++ |.+|++..|+... ..+.+.++.+ +. ..+++.+|++++ ++++.+
T Consensus 11 aia~~l~~~--Ga~V~~~~~~~~~--~~~~~~~l~~--------------~~--~~~~~~~D~~~~------~~v~~~~~ 64 (241)
T PF13561_consen 11 AIARALAEE--GANVILTDRNEEK--LADALEELAK--------------EY--GAEVIQCDLSDE------ESVEALFD 64 (241)
T ss_dssp HHHHHHHHT--TEEEEEEESSHHH--HHHHHHHHHH--------------HT--TSEEEESCTTSH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEeCChHH--HHHHHHHHHH--------------Hc--CCceEeecCcch------HHHHHHHH
Confidence 678999998 9999999996432 1222332211 11 133699999876 566655
Q ss_pred -----h-cCccEEEEcccccCc----c-------hhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccc
Q psy7539 80 -----S-ETIHIVYHIAATVRF----D-------DYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 80 -----~-~~~d~Vih~Aa~~~~----~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ .++|++||+++.... . ..+...++.|+.+...+.+++... ..-..+|++||.......
T Consensus 65 ~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~--- 141 (241)
T PF13561_consen 65 EAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM--- 141 (241)
T ss_dssp HHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS---
T ss_pred HHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC---
Confidence 3 468999999987543 1 234568889999999988887542 122579999997653210
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecccccccccC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G~~~ 216 (318)
| ....|+.+|.+.+.+.+.++. +|+++..+.||.+..+..
T Consensus 142 -------~----------------------------~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~ 186 (241)
T PF13561_consen 142 -------P----------------------------GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMT 186 (241)
T ss_dssp -------T----------------------------TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHH
T ss_pred -------c----------------------------cchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccch
Confidence 0 016899999999988877654 489999999996643210
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .......+...+... .+ ..-+...+|+|.++..++...... ..+.++.+.++
T Consensus 187 ~-------~~~~~~~~~~~~~~~-------~p--l~r~~~~~evA~~v~fL~s~~a~~--itG~~i~vDGG 239 (241)
T PF13561_consen 187 E-------RIPGNEEFLEELKKR-------IP--LGRLGTPEEVANAVLFLASDAASY--ITGQVIPVDGG 239 (241)
T ss_dssp H-------HHHTHHHHHHHHHHH-------ST--TSSHBEHHHHHHHHHHHHSGGGTT--GTSEEEEESTT
T ss_pred h-------ccccccchhhhhhhh-------hc--cCCCcCHHHHHHHHHHHhCccccC--ccCCeEEECCC
Confidence 0 000011122222211 11 123568999999999988765321 24777877765
|
... |
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.5e-07 Score=77.60 Aligned_cols=142 Identities=16% Similarity=0.174 Sum_probs=100.3
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchh-ccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAI-FEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
.|+++|.++ |+.|.+---.+. +.+.|. .+. .++++.++.|++++ +++.++.
T Consensus 44 ~LA~~L~~~--Gf~V~Agcl~~~---gae~L~-----------------~~~~s~rl~t~~LDVT~~------esi~~a~ 95 (322)
T KOG1610|consen 44 LLAKKLDKK--GFRVFAGCLTEE---GAESLR-----------------GETKSPRLRTLQLDVTKP------ESVKEAA 95 (322)
T ss_pred HHHHHHHhc--CCEEEEEeecCc---hHHHHh-----------------hhhcCCcceeEeeccCCH------HHHHHHH
Confidence 477888887 998888874332 222222 222 57889999999998 5676654
Q ss_pred c---------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCccc
Q psy7539 81 E---------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~---------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ +.-.|||+||...+ .+.+...+++|+.|+.++-.+.... +.--|+|++||..+-...
T Consensus 96 ~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~--- 172 (322)
T KOG1610|consen 96 QWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVAL--- 172 (322)
T ss_pred HHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccC---
Confidence 4 34699999996421 2456778999999987776655422 133599999998763321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccc
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPS 209 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~ 209 (318)
|. -.+|+.||++.|.+.....+ .|+++.++-||
T Consensus 173 -------p~----------------------------~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG 209 (322)
T KOG1610|consen 173 -------PA----------------------------LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG 209 (322)
T ss_pred -------cc----------------------------cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC
Confidence 10 17999999999988876654 69999999999
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.8e-06 Score=73.33 Aligned_cols=182 Identities=16% Similarity=0.162 Sum_probs=118.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
|.++.+++++ +.++++...++... .+-.+.. ... .++..+.+|++++ +++..+.
T Consensus 52 r~ialefa~r--g~~~vl~Din~~~~--~etv~~~---------------~~~-g~~~~y~cdis~~------eei~~~a 105 (300)
T KOG1201|consen 52 RLIALEFAKR--GAKLVLWDINKQGN--EETVKEI---------------RKI-GEAKAYTCDISDR------EEIYRLA 105 (300)
T ss_pred HHHHHHHHHh--CCeEEEEeccccch--HHHHHHH---------------Hhc-CceeEEEecCCCH------HHHHHHH
Confidence 4577788888 77777777754322 1111111 111 3688999999987 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHH----HHHHHHHHHhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRG----TRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~g----t~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||.||.+.. ++..+..+++|+.| ++.++-.+.+. +-.++|-++|..+.....
T Consensus 106 ~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~IaS~aG~~g~~--- 181 (300)
T KOG1201|consen 106 KKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIASVAGLFGPA--- 181 (300)
T ss_pred HHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEehhhhcccCCc---
Confidence 3 68999999998632 23455688999876 45555556653 556999999977654311
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-------cCCcEEEeccccccccc
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-------AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~~~ilR~~~v~G~~ 215 (318)
....|+.||.++..+-+.... .|++.+.+-|+.+=
T Consensus 182 -----------------------------------gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~--- 223 (300)
T KOG1201|consen 182 -----------------------------------GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN--- 223 (300)
T ss_pred -----------------------------------cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc---
Confidence 017899999998766555431 57889999888661
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
. +++ .+ ...-....+.+..+.||+.++.++.....
T Consensus 224 ----T----gmf----------~~-----~~~~~~l~P~L~p~~va~~Iv~ai~~n~~ 258 (300)
T KOG1201|consen 224 ----T----GMF----------DG-----ATPFPTLAPLLEPEYVAKRIVEAILTNQA 258 (300)
T ss_pred ----c----ccc----------CC-----CCCCccccCCCCHHHHHHHHHHHHHcCCc
Confidence 0 111 11 11223556888999999999999987664
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.1e-06 Score=76.71 Aligned_cols=156 Identities=15% Similarity=0.125 Sum_probs=97.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCC----HHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHH
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKN----SRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQ 77 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~----~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~ 77 (318)
++++.|++. |++|++..|+..... ..+++.+..+ .+ .....++.++.+|++++ ++++
T Consensus 23 aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~-----~l------~~~~~~~~~~~~Dv~~~------~~v~ 83 (305)
T PRK08303 23 GIAVELGAA--GATVYVTGRSTRARRSEYDRPETIEETAE-----LV------TAAGGRGIAVQVDHLVP------EQVR 83 (305)
T ss_pred HHHHHHHHC--CCEEEEEecccccccccccccchHHHHHH-----HH------HhcCCceEEEEcCCCCH------HHHH
Confidence 678899888 999999999743110 0112221100 00 11123577899999986 4565
Q ss_pred HHhc-------CccEEEEcc-ccc---C----c----chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccc
Q psy7539 78 MLSE-------TIHIVYHIA-ATV---R----F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCH 135 (318)
Q Consensus 78 ~~~~-------~~d~Vih~A-a~~---~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~ 135 (318)
.+++ .+|++||+| |.. . . ...+...+++|+.+...+.+++... .+-.++|++||....
T Consensus 84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~ 163 (305)
T PRK08303 84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAE 163 (305)
T ss_pred HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccc
Confidence 5443 589999999 631 1 1 1223456788999888887776542 122479999985432
Q ss_pred cCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 136 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
.... ..+ ....|+.||.+...+.+..+. .|+++..+.||.+
T Consensus 164 ~~~~-------~~~----------------------------~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v 208 (305)
T PRK08303 164 YNAT-------HYR----------------------------LSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWL 208 (305)
T ss_pred ccCc-------CCC----------------------------CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCcc
Confidence 1100 000 015799999999988876654 5789999999866
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.2e-06 Score=66.95 Aligned_cols=194 Identities=10% Similarity=-0.003 Sum_probs=121.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++.+++ |++|++++|+++.... .+.+.+++.|+.++ +.+...+
T Consensus 14 s~i~~EA~~R--GHeVTAivRn~~K~~~-------------------------~~~~~i~q~Difd~------~~~a~~l 60 (211)
T COG2910 14 SRILKEALKR--GHEVTAIVRNASKLAA-------------------------RQGVTILQKDIFDL------TSLASDL 60 (211)
T ss_pred HHHHHHHHhC--CCeeEEEEeChHhccc-------------------------cccceeecccccCh------hhhHhhh
Confidence 3689999999 9999999997654321 14677899999987 4677888
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccc--cCCCCCChhHHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEK--TYPPPVSPHNVIEK 158 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~--~~~~p~~~~~~~~~ 158 (318)
.+.|+||..-+....... .........|++..+.. +++|++.++.++...- +|. ....|..|.
T Consensus 61 ~g~DaVIsA~~~~~~~~~-----~~~~k~~~~li~~l~~a-gv~RllVVGGAGSL~i----d~g~rLvD~p~fP~----- 125 (211)
T COG2910 61 AGHDAVISAFGAGASDND-----ELHSKSIEALIEALKGA-GVPRLLVVGGAGSLEI----DEGTRLVDTPDFPA----- 125 (211)
T ss_pred cCCceEEEeccCCCCChh-----HHHHHHHHHHHHHHhhc-CCeeEEEEcCccceEE----cCCceeecCCCCch-----
Confidence 999999977665421111 11233366678888874 8899999988654321 111 111111111
Q ss_pred HhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhc
Q psy7539 159 AELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGK 238 (318)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (318)
..|...+..+|.+-.--.+..++++-+-|+..|-+... .+-|. .
T Consensus 126 ---------------------ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGer------Tg~yr---------l 169 (211)
T COG2910 126 ---------------------EYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPGER------TGNYR---------L 169 (211)
T ss_pred ---------------------hHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCccc------cCceE---------e
Confidence 45666777777443222224699999999988764221 12222 1
Q ss_pred CceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEe
Q psy7539 239 GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 284 (318)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni 284 (318)
|.-..+. ....-++|...|.|-+++.-++++.- ..+.|.+
T Consensus 170 ggD~ll~--n~~G~SrIS~aDYAiA~lDe~E~~~h----~rqRftv 209 (211)
T COG2910 170 GGDQLLV--NAKGESRISYADYAIAVLDELEKPQH----IRQRFTV 209 (211)
T ss_pred ccceEEE--cCCCceeeeHHHHHHHHHHHHhcccc----cceeeee
Confidence 2211111 12334778889999999999998775 3556654
|
|
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=7e-07 Score=81.02 Aligned_cols=206 Identities=14% Similarity=0.091 Sum_probs=116.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
.+++.|+++ |+.|++++|+...+....+ . .........+..|...+. +.+..+..
T Consensus 94 ~iv~~llkr--gf~vra~VRd~~~a~~~~~---~---------------~~~d~~~~~v~~~~~~~~-----d~~~~~~~ 148 (411)
T KOG1203|consen 94 RIVKILLKR--GFSVRALVRDEQKAEDLLG---V---------------FFVDLGLQNVEADVVTAI-----DILKKLVE 148 (411)
T ss_pred HHHHHHHHC--CCeeeeeccChhhhhhhhc---c---------------cccccccceeeecccccc-----chhhhhhh
Confidence 578999999 8999999997554322111 0 111123334444433321 22333333
Q ss_pred ----CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHH
Q psy7539 82 ----TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 82 ----~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~ 157 (318)
...+++-+++-.....+...-+.+...|++|+++||+.+ +++|||++||+.+.-... |- |....
T Consensus 149 ~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~~~~~~---------~~-~~~~~- 216 (411)
T KOG1203|consen 149 AVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGGTKFNQ---------PP-NILLL- 216 (411)
T ss_pred hccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecCcccCC---------Cc-hhhhh-
Confidence 345677666653322211123467789999999999996 999999999977632210 00 00000
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHh
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAG 237 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~ 237 (318)
-..+-.+|+++|+++.+. |++++|+|++...-...... +. ..
T Consensus 217 ---------------------~~~~~~~k~~~e~~~~~S---gl~ytiIR~g~~~~~~~~~~-------~~-------~~ 258 (411)
T KOG1203|consen 217 ---------------------NGLVLKAKLKAEKFLQDS---GLPYTIIRPGGLEQDTGGQR-------EV-------VV 258 (411)
T ss_pred ---------------------hhhhhHHHHhHHHHHHhc---CCCcEEEeccccccCCCCcc-------ee-------cc
Confidence 035568889999998866 89999999995533211100 00 00
Q ss_pred cCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 238 KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....... .....--.+.-.|+|..++.++.+.... ...+..++..
T Consensus 259 ~~~~~~~--~~~~~~~~i~r~~vael~~~all~~~~~---~~k~~~~v~~ 303 (411)
T KOG1203|consen 259 DDEKELL--TVDGGAYSISRLDVAELVAKALLNEAAT---FKKVVELVLK 303 (411)
T ss_pred cCccccc--cccccceeeehhhHHHHHHHHHhhhhhc---cceeEEeecC
Confidence 0000011 1122224677889999999998887763 2345555443
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.4e-06 Score=75.07 Aligned_cols=164 Identities=15% Similarity=0.121 Sum_probs=104.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
..+++|..+ |.+|+...|+. +.+.+-..++.. .....++.++.+|+++. +++....+
T Consensus 50 eta~~La~~--Ga~Vv~~~R~~--~~~~~~~~~i~~-------------~~~~~~i~~~~lDLssl------~SV~~fa~ 106 (314)
T KOG1208|consen 50 ETARELALR--GAHVVLACRNE--ERGEEAKEQIQK-------------GKANQKIRVIQLDLSSL------KSVRKFAE 106 (314)
T ss_pred HHHHHHHhC--CCEEEEEeCCH--HHHHHHHHHHHh-------------cCCCCceEEEECCCCCH------HHHHHHHH
Confidence 568899998 89999999974 122222211111 22345889999999976 45555433
Q ss_pred -------CccEEEEcccccCcch-----hHHHHHHHhHHHHHHHHHH----HHhcCCCccEEEEeccccccCCccccccc
Q psy7539 82 -------TIHIVYHIAATVRFDD-----YMQTYVFLNTRGTRDMLNL----SKQMIHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~~~-----~~~~~~~~Nv~gt~~ll~~----a~~~~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
..|+.|+.||...... -.+..+.+|+.|...|.++ ++.. ...|+|++||... +....+..
T Consensus 107 ~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RIV~vsS~~~-~~~~~~~~-- 182 (314)
T KOG1208|consen 107 EFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRIVNVSSILG-GGKIDLKD-- 182 (314)
T ss_pred HHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCEEEEcCccc-cCccchhh--
Confidence 5799999999864332 2456788899886655554 4543 3379999999765 21101100
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--c-CCcEEEecccccccc
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--A-GMPCMILRPSIIIPI 214 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~-~~~~~ilR~~~v~G~ 214 (318)
...+. .. .......|+.||.+......+..+ + |+.+..+.||.|-..
T Consensus 183 l~~~~---------------------~~-~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 183 LSGEK---------------------AK-LYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTT 232 (314)
T ss_pred ccchh---------------------cc-CccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccc
Confidence 00000 00 000113599999999988888877 3 789999999988653
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.4e-05 Score=64.60 Aligned_cols=202 Identities=13% Similarity=0.065 Sum_probs=119.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
|++...|.++ |++|.+..+++..++...+. + +.. .+-..+.+|++++. +.+..+
T Consensus 28 rAia~~la~~--Garv~v~dl~~~~A~ata~~--L---------------~g~-~~h~aF~~DVS~a~------~v~~~l 81 (256)
T KOG1200|consen 28 RAIAQLLAKK--GARVAVADLDSAAAEATAGD--L---------------GGY-GDHSAFSCDVSKAH------DVQNTL 81 (256)
T ss_pred HHHHHHHHhc--CcEEEEeecchhhHHHHHhh--c---------------CCC-CccceeeeccCcHH------HHHHHH
Confidence 3556666666 99988888865533222111 1 111 23446789999863 444322
Q ss_pred -------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---CCC--ccEEEEeccccc-cCCcc
Q psy7539 81 -------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHL--QLFVYVSTAYCH-PKEKV 140 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~--~~~v~~SS~~~~-~~~~~ 140 (318)
..++++++|||.+... +.+++.+.+|+.|+..+.+++.+. .+. -.+|++||.-+- |+.+
T Consensus 82 ~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G- 160 (256)
T KOG1200|consen 82 EEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG- 160 (256)
T ss_pred HHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc-
Confidence 2689999999996432 456778999999998888877653 122 279999996442 2211
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHH----HHHHHHHhhhcCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCL----CEGVVTEYMEAGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~----~E~~~~~~~~~~~~~~ilR~~~v~G~~~ 216 (318)
-+.|++||.- ...+.++.+++++++.++-||++-.+..
T Consensus 161 --------------------------------------QtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT 202 (256)
T KOG1200|consen 161 --------------------------------------QTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMT 202 (256)
T ss_pred --------------------------------------chhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhh
Confidence 0566666542 2223333344589999999998844322
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. -.|...+..+....+ ..-+-..+++|..+..++..... ...+..+.+.++
T Consensus 203 ~---------~mp~~v~~ki~~~iP---------mgr~G~~EevA~~V~fLAS~~ss--YiTG~t~evtGG 253 (256)
T KOG1200|consen 203 E---------AMPPKVLDKILGMIP---------MGRLGEAEEVANLVLFLASDASS--YITGTTLEVTGG 253 (256)
T ss_pred h---------hcCHHHHHHHHccCC---------ccccCCHHHHHHHHHHHhccccc--cccceeEEEecc
Confidence 1 122334444443211 11344578899988887744332 234667777665
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.9e-06 Score=90.01 Aligned_cols=115 Identities=11% Similarity=-0.010 Sum_probs=85.1
Q ss_pred ccceEEEeccCCCCCCCCCHHHHHHHhc------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc
Q psy7539 54 FEKVIPINGDVAVPDLGISAEDRQMLSE------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM 120 (318)
Q Consensus 54 ~~~i~~~~gDl~~~~~gl~~~~~~~~~~------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 120 (318)
..++.++.+|+++. +.+..+++ ++|.|||+||.... ...+...+++|+.|+.++++++...
T Consensus 2093 G~~v~y~~~DVtD~------~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~ 2166 (2582)
T TIGR02813 2093 GASAEYASADVTNS------VSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAE 2166 (2582)
T ss_pred CCcEEEEEccCCCH------HHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34788999999986 45555443 58999999997422 2345678999999999999999874
Q ss_pred CCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--
Q psy7539 121 IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-- 198 (318)
Q Consensus 121 ~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-- 198 (318)
..++||++||..+..... ....|+.+|...+.+......
T Consensus 2167 -~~~~IV~~SSvag~~G~~--------------------------------------gqs~YaaAkaaL~~la~~la~~~ 2207 (2582)
T TIGR02813 2167 -NIKLLALFSSAAGFYGNT--------------------------------------GQSDYAMSNDILNKAALQLKALN 2207 (2582)
T ss_pred -CCCeEEEEechhhcCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHc
Confidence 567899999976532110 016799999998888777665
Q ss_pred cCCcEEEeccccccc
Q psy7539 199 AGMPCMILRPSIIIP 213 (318)
Q Consensus 199 ~~~~~~ilR~~~v~G 213 (318)
.+.++..+.+|.+-|
T Consensus 2208 ~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2208 PSAKVMSFNWGPWDG 2222 (2582)
T ss_pred CCcEEEEEECCeecC
Confidence 367888888886544
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.6e-05 Score=69.07 Aligned_cols=190 Identities=13% Similarity=0.095 Sum_probs=110.6
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
.|..++..+ |..|.+++|++... +.+...++- .....++.+..+|+.+- ++...+++
T Consensus 48 ~la~e~~~~--ga~Vti~ar~~~kl---~~a~~~l~l------------~~~~~~v~~~S~d~~~Y------~~v~~~~~ 104 (331)
T KOG1210|consen 48 ALALECKRE--GADVTITARSGKKL---LEAKAELEL------------LTQVEDVSYKSVDVIDY------DSVSKVIE 104 (331)
T ss_pred HHHHHHHHc--cCceEEEeccHHHH---HHHHhhhhh------------hhccceeeEeccccccH------HHHHHHHh
Confidence 455666666 88999999964321 111111110 11123477889999543 34443333
Q ss_pred -------CccEEEEcccccC-------cchhHHHHHHHhHHHHHHHHHHHHhc-CCCc---cEEEEeccccccCCccccc
Q psy7539 82 -------TIHIVYHIAATVR-------FDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQ---LFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~---~~v~~SS~~~~~~~~~~~E 143 (318)
.+|.+|||||..- .....+..+++|+.|+.++..++... +... +|+.+||..+...
T Consensus 105 ~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~------ 178 (331)
T KOG1210|consen 105 ELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLG------ 178 (331)
T ss_pred hhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcC------
Confidence 5799999999731 11234568999999999999876543 2333 7889999544221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
..+.+.|..+|.+...+.....+ +++.++..-|+.+-.+
T Consensus 179 --------------------------------i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tp----- 221 (331)
T KOG1210|consen 179 --------------------------------IYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTP----- 221 (331)
T ss_pred --------------------------------cccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCC-----
Confidence 01127888898877766665544 6788888888755332
Q ss_pred CCcc-cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 220 PGWT-DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 220 ~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
|.. ++.-.| ....--++.-+.+.-+++|.+++.-+.+.
T Consensus 222 -GfE~En~tkP-------------~~t~ii~g~ss~~~~e~~a~~~~~~~~rg 260 (331)
T KOG1210|consen 222 -GFERENKTKP-------------EETKIIEGGSSVIKCEEMAKAIVKGMKRG 260 (331)
T ss_pred -ccccccccCc-------------hheeeecCCCCCcCHHHHHHHHHhHHhhc
Confidence 211 111111 11111123334478888888887766553
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.8e-05 Score=67.14 Aligned_cols=149 Identities=15% Similarity=0.185 Sum_probs=98.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCC-CCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV-PDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~-~~~gl~~~~~~~~ 79 (318)
+.++++|+.+ |.+|++..|..... ..+.+.+... . ... ..+.+...|+++ . +....+
T Consensus 19 ~aia~~l~~~--G~~v~~~~~~~~~~-~~~~~~~~~~---------~---~~~-~~~~~~~~Dvs~~~------~~v~~~ 76 (251)
T COG1028 19 RAIARALARE--GARVVVAARRSEEE-AAEALAAAIK---------E---AGG-GRAAAVAADVSDDE------ESVEAL 76 (251)
T ss_pred HHHHHHHHHC--CCeEEEEcCCCchh-hHHHHHHHHH---------h---cCC-CcEEEEEecCCCCH------HHHHHH
Confidence 3678899966 99988888865432 1122221110 0 000 367788899987 4 344443
Q ss_pred hc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcCCCc--cEEEEeccccccCCcccc
Q psy7539 80 SE-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQ--LFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~--~~v~~SS~~~~~~~~~~~ 142 (318)
++ .+|++||+||.... .......+++|+.|...+.+++.. ..+ ++|++||..+. .....
T Consensus 77 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~--~~~~~~Iv~isS~~~~-~~~~~- 152 (251)
T COG1028 77 VAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALP--LMKKQRIVNISSVAGL-GGPPG- 152 (251)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHH--hhhhCeEEEECCchhc-CCCCC-
Confidence 32 48999999997421 134556899999999998885543 333 99999997764 21100
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
...|+.||.+.+.+...... +|+.+..+.||.+
T Consensus 153 ------------------------------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~ 189 (251)
T COG1028 153 ------------------------------------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYI 189 (251)
T ss_pred ------------------------------------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccC
Confidence 16899999999888777653 5789999999944
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=98.28 E-value=4.2e-05 Score=66.87 Aligned_cols=215 Identities=15% Similarity=0.114 Sum_probs=126.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH-
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML- 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~- 79 (318)
|+++.+|.+. |.+|++..|+..... +........ .....++..+.+|+++. ++...+
T Consensus 22 ~aia~~la~~--Ga~v~i~~r~~~~~~--~~~~~~~~~------------~~~~~~~~~~~~Dv~~~------~~~~~l~ 79 (270)
T KOG0725|consen 22 KAIALLLAKA--GAKVVITGRSEERLE--ETAQELGGL------------GYTGGKVLAIVCDVSKE------VDVEKLV 79 (270)
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHHHH--HHHHHHHhc------------CCCCCeeEEEECcCCCH------HHHHHHH
Confidence 4678889988 999999999643211 111111000 11245788999999865 233333
Q ss_pred -------hcCccEEEEcccccCcc--------hhHHHHHHHhHHH-HHHHHHHHHhc---CCCccEEEEeccccccCCcc
Q psy7539 80 -------SETIHIVYHIAATVRFD--------DYMQTYVFLNTRG-TRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 80 -------~~~~d~Vih~Aa~~~~~--------~~~~~~~~~Nv~g-t~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~ 140 (318)
+.+.|+++++||..... +.++..+++|+.| +..+..+|..+ .+--.++++||........
T Consensus 80 ~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~- 158 (270)
T KOG0725|consen 80 EFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGP- 158 (270)
T ss_pred HHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC-
Confidence 23689999999975322 3456789999995 66666666543 1334678888865543210
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
..+..|+.||.+.+++.+..+. +|+++..+-||.+..+..
T Consensus 159 ------------------------------------~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~ 202 (270)
T KOG0725|consen 159 ------------------------------------GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLR 202 (270)
T ss_pred ------------------------------------CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCcc
Confidence 0015799999999999988764 689999999998866431
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .++.. .....+..... . . .....--+.-.+|++.++..++...... ..+....+.++
T Consensus 203 ~--~~~~~---~~~~~~~~~~~-~-~----~~~p~gr~g~~~eva~~~~fla~~~asy--itG~~i~vdgG 260 (270)
T KOG0725|consen 203 A--AGLDD---GEMEEFKEATD-S-K----GAVPLGRVGTPEEVAEAAAFLASDDASY--ITGQTIIVDGG 260 (270)
T ss_pred c--ccccc---chhhHHhhhhc-c-c----cccccCCccCHHHHHHhHHhhcCccccc--ccCCEEEEeCC
Confidence 0 11000 00011111100 0 0 0101224556788888887777664331 23556666555
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00014 Score=64.79 Aligned_cols=151 Identities=11% Similarity=-0.045 Sum_probs=89.7
Q ss_pred CccEEEEcccccC-----c----chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCCCCC
Q psy7539 82 TIHIVYHIAATVR-----F----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVS 151 (318)
Q Consensus 82 ~~d~Vih~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~ 151 (318)
.+|++||+||... + ...++..+++|+.+...+.+++... ..--++|++||..+... .|.
T Consensus 120 ~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~~~~----------~p~- 188 (303)
T PLN02730 120 SIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYIASERI----------IPG- 188 (303)
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechhhcCC----------CCC-
Confidence 5899999996421 1 1345668999999999888877652 11158999999654221 010
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
....|+.||.+.+.+.+.++. +|+++..+-||.+-.+... .+
T Consensus 189 --------------------------~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~-------~~ 235 (303)
T PLN02730 189 --------------------------YGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAK-------AI 235 (303)
T ss_pred --------------------------CchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhh-------cc
Confidence 003699999999988877654 3688999999866332110 00
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
............. . +- .-+...+|++.+++.++...... ..+..+.+.++
T Consensus 236 ~~~~~~~~~~~~~----~---pl--~r~~~peevA~~~~fLaS~~a~~--itG~~l~vdGG 285 (303)
T PLN02730 236 GFIDDMIEYSYAN----A---PL--QKELTADEVGNAAAFLASPLASA--ITGATIYVDNG 285 (303)
T ss_pred cccHHHHHHHHhc----C---CC--CCCcCHHHHHHHHHHHhCccccC--ccCCEEEECCC
Confidence 0001111111110 0 10 13467899999999988643321 13566666554
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=98.11 E-value=6.2e-06 Score=65.31 Aligned_cols=191 Identities=18% Similarity=0.170 Sum_probs=117.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
|.++..|.+. |.+|++++|.+. .|.++. .+-...|+.+.+|++.- +.+.+++
T Consensus 21 ~~~v~~La~a--GA~ViAvaR~~a------~L~sLV--------------~e~p~~I~Pi~~Dls~w------ea~~~~l 72 (245)
T KOG1207|consen 21 KEIVLSLAKA--GAQVIAVARNEA------NLLSLV--------------KETPSLIIPIVGDLSAW------EALFKLL 72 (245)
T ss_pred HHHHHHHHhc--CCEEEEEecCHH------HHHHHH--------------hhCCcceeeeEecccHH------HHHHHhh
Confidence 4578888888 999999999632 122211 22234589999999842 2233333
Q ss_pred c---CccEEEEcccccC---c----chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccccccC
Q psy7539 81 E---TIHIVYHIAATVR---F----DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 81 ~---~~d~Vih~Aa~~~---~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
. .+|..++.||.-- + ....+..+++|+.+..++.+...+. ...-.+|.+||....-.
T Consensus 73 ~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~--------- 143 (245)
T KOG1207|consen 73 VPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRP--------- 143 (245)
T ss_pred cccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccc---------
Confidence 2 4699999999731 1 1233346778998887777663321 12235899999654211
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCc
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
. +.++.|..+|.+.+.+..-.+- +.+++..+.|..|+.... ...|
T Consensus 144 ---~--------------------------~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG--~dnW 192 (245)
T KOG1207|consen 144 ---L--------------------------DNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMG--RDNW 192 (245)
T ss_pred ---c--------------------------CCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEeccc--cccc
Confidence 1 1228999999999877765543 568899999998876432 2345
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
.+.... +++ . +.-..--|.-|+.|++++..++.....
T Consensus 193 SDP~K~----------k~m---L-~riPl~rFaEV~eVVnA~lfLLSd~ss 229 (245)
T KOG1207|consen 193 SDPDKK----------KKM---L-DRIPLKRFAEVDEVVNAVLFLLSDNSS 229 (245)
T ss_pred CCchhc----------cch---h-hhCchhhhhHHHHHHhhheeeeecCcC
Confidence 443221 111 0 111122578899999998888766543
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00022 Score=58.36 Aligned_cols=145 Identities=19% Similarity=0.151 Sum_probs=96.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
.|.+++++. |-+|++-.|+ .+||.+.. ...+.+.-..+|+.|. ++..++.+
T Consensus 20 ~lak~f~el--gN~VIi~gR~------e~~L~e~~---------------~~~p~~~t~v~Dv~d~------~~~~~lve 70 (245)
T COG3967 20 ALAKRFLEL--GNTVIICGRN------EERLAEAK---------------AENPEIHTEVCDVADR------DSRRELVE 70 (245)
T ss_pred HHHHHHHHh--CCEEEEecCc------HHHHHHHH---------------hcCcchheeeecccch------hhHHHHHH
Confidence 578888888 8899999995 34555542 2345778889999876 33443332
Q ss_pred -------CccEEEEcccccC---cc------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVR---FD------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~---~~------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
..+++|++||... +. ....+-..+|+.++.+|..+...+ ..-.-+|.+||.-+..+..
T Consensus 71 wLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~--- 147 (245)
T COG3967 71 WLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMA--- 147 (245)
T ss_pred HHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccc---
Confidence 5799999999852 11 112346778999999888877653 1123589999965533211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhh---h-cCCcEEEeccccccc
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYM---E-AGMPCMILRPSIIIP 213 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~-~~~~~~ilR~~~v~G 213 (318)
....|..||.+...+-.... + .++.+.=+-|+.|--
T Consensus 148 -----------------------------------~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t 187 (245)
T COG3967 148 -----------------------------------STPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDT 187 (245)
T ss_pred -----------------------------------ccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceec
Confidence 01579999998886654443 3 467777778887744
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.5e-05 Score=66.05 Aligned_cols=205 Identities=16% Similarity=0.107 Sum_probs=120.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
.+.+.|+++ |+++.++.-+..+.+...+|.+ .....++-|+.+|+++. .+++..++
T Consensus 20 ~~sk~Ll~k--gik~~~i~~~~En~~a~akL~a----------------i~p~~~v~F~~~DVt~~------~~~~~~f~ 75 (261)
T KOG4169|consen 20 ATSKALLEK--GIKVLVIDDSEENPEAIAKLQA----------------INPSVSVIFIKCDVTNR------GDLEAAFD 75 (261)
T ss_pred HHHHHHHHc--CchheeehhhhhCHHHHHHHhc----------------cCCCceEEEEEeccccH------HHHHHHHH
Confidence 456889988 9955555443333333333332 22345889999999985 45555544
Q ss_pred -------CccEEEEcccccCcchhHHHHHHHhHHH----HHHHHHHHHhcC--CCccEEEEeccccccCCcccccccCCC
Q psy7539 82 -------TIHIVYHIAATVRFDDYMQTYVFLNTRG----TRDMLNLSKQMI--HLQLFVYVSTAYCHPKEKVLEEKTYPP 148 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~~~~~~~~~~~Nv~g----t~~ll~~a~~~~--~~~~~v~~SS~~~~~~~~~~~E~~~~~ 148 (318)
.+|++||.||... +.+.+.+..+|+.| |.-.+.++.+-. .---+|.+||.++..+ .
T Consensus 76 ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P----------~ 144 (261)
T KOG4169|consen 76 KILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP----------M 144 (261)
T ss_pred HHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc----------c
Confidence 5799999999866 44467788888765 555666665432 1235789999877432 1
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHH------hhhcCCcEEEecccccccccCCCCCCc
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTE------YMEAGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~~~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
|. ...|++||.-.=.+.+. |.+.|+.+..+.||.+--.-.+-...
T Consensus 145 p~----------------------------~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~- 195 (261)
T KOG4169|consen 145 PV----------------------------FPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDA- 195 (261)
T ss_pred cc----------------------------chhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHh-
Confidence 11 05788888754433333 22258999999999662211100000
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...+....+.+...+.. ..-..-.+++..++.+++.... +..|-+..+
T Consensus 196 ~~~~~e~~~~~~~~l~~------------~~~q~~~~~a~~~v~aiE~~~N-----Gaiw~v~~g 243 (261)
T KOG4169|consen 196 SGGYLEYSDSIKEALER------------APKQSPACCAINIVNAIEYPKN-----GAIWKVDSG 243 (261)
T ss_pred cCCcccccHHHHHHHHH------------cccCCHHHHHHHHHHHHhhccC-----CcEEEEecC
Confidence 00001111222222221 1233456788999999998664 788888876
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=97.98 E-value=4.6e-05 Score=62.50 Aligned_cols=143 Identities=16% Similarity=0.121 Sum_probs=95.6
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+|.+++.+. |+.|++.+|+-+ .+..|. ...++.....|++++ ++..+...
T Consensus 23 ala~ef~~~--G~~V~AtaR~~e---~M~~L~-------------------~~~gl~~~kLDV~~~------~~V~~v~~ 72 (289)
T KOG1209|consen 23 ALAKEFARN--GYLVYATARRLE---PMAQLA-------------------IQFGLKPYKLDVSKP------EEVVTVSG 72 (289)
T ss_pred HHHHHHHhC--CeEEEEEccccc---hHhhHH-------------------HhhCCeeEEeccCCh------HHHHHHHH
Confidence 578888887 999999999632 222221 124688899999987 34444332
Q ss_pred --------CccEEEEcccccCc----c---hhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 82 --------TIHIVYHIAATVRF----D---DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 --------~~d~Vih~Aa~~~~----~---~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+.|+++|.||.... + ...+..+++|+-|..++.++.... ...-.+|++.|..++-+
T Consensus 73 evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vp------- 145 (289)
T KOG1209|consen 73 EVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVP------- 145 (289)
T ss_pred HHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEec-------
Confidence 47999999998521 1 233458899998877777665432 12247999999766432
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII 212 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~ 212 (318)
-++. ..|.+||++..++.+-..- .|++++.+-+|-|-
T Consensus 146 -----fpf~--------------------------~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~ 186 (289)
T KOG1209|consen 146 -----FPFG--------------------------SIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVA 186 (289)
T ss_pred -----cchh--------------------------hhhhHHHHHHHHhhhhcEEeeeccccEEEEeccccee
Confidence 1111 7899999998887766532 56777777777553
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00027 Score=61.52 Aligned_cols=157 Identities=11% Similarity=0.060 Sum_probs=98.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
|+..++|.++ |.+|+++.|..+ ..+++.+-+. ....-+++++..|.++++. +-+.+.+.+
T Consensus 63 KayA~eLAkr--G~nvvLIsRt~~---KL~~v~kEI~-------------~~~~vev~~i~~Dft~~~~--~ye~i~~~l 122 (312)
T KOG1014|consen 63 KAYARELAKR--GFNVVLISRTQE---KLEAVAKEIE-------------EKYKVEVRIIAIDFTKGDE--VYEKLLEKL 122 (312)
T ss_pred HHHHHHHHHc--CCEEEEEeCCHH---HHHHHHHHHH-------------HHhCcEEEEEEEecCCCch--hHHHHHHHh
Confidence 5678999999 999999999533 2333332221 2223468899999998851 123344444
Q ss_pred c--CccEEEEcccccCcc-h--------hHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccC
Q psy7539 81 E--TIHIVYHIAATVRFD-D--------YMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~-~--------~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
. ++.++||++|..... . ..+....+|+.++..+.+..... .+---+|++||..+.-+
T Consensus 123 ~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p--------- 193 (312)
T KOG1014|consen 123 AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP--------- 193 (312)
T ss_pred cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc---------
Confidence 4 567999999986421 1 22345566877766665554321 13346899999765321
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
.|. ...|+.||...+.+-....+ +|+.+-.+-|..|-+..
T Consensus 194 -~p~----------------------------~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm 237 (312)
T KOG1014|consen 194 -TPL----------------------------LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM 237 (312)
T ss_pred -Chh----------------------------HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence 111 17899999976655544332 68888889998887653
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0025 Score=56.67 Aligned_cols=151 Identities=9% Similarity=-0.036 Sum_probs=89.7
Q ss_pred CccEEEEcccccC-----c----chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCCCCC
Q psy7539 82 TIHIVYHIAATVR-----F----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVS 151 (318)
Q Consensus 82 ~~d~Vih~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~ 151 (318)
.+|++||+||... + ...+...+++|+.|..++.+++... ..-.++|++||..+... .|.
T Consensus 119 ~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~----------~p~- 187 (299)
T PRK06300 119 HIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRA----------VPG- 187 (299)
T ss_pred CCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCc----------CCC-
Confidence 6899999997521 1 1335568899999999999888753 12246889988654211 010
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
....|+.||.+.+.+.+.+.. +|+++..+.||.+-.+... .+
T Consensus 188 --------------------------~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~-------~~ 234 (299)
T PRK06300 188 --------------------------YGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGK-------AI 234 (299)
T ss_pred --------------------------ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhh-------cc
Confidence 002699999999988877654 2789999999966332100 00
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..+.... ...... .+ ..-+...+|++.++..++...... ..+.++.+.++
T Consensus 235 ~~~~~~~-~~~~~~---~p-----~~r~~~peevA~~v~~L~s~~~~~--itG~~i~vdGG 284 (299)
T PRK06300 235 GFIERMV-DYYQDW---AP-----LPEPMEAEQVGAAAAFLVSPLASA--ITGETLYVDHG 284 (299)
T ss_pred cccHHHH-HHHHhc---CC-----CCCCcCHHHHHHHHHHHhCccccC--CCCCEEEECCC
Confidence 0001111 111100 00 113457899999998887653321 13667777554
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00066 Score=60.74 Aligned_cols=118 Identities=11% Similarity=-0.028 Sum_probs=80.1
Q ss_pred HHHHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCccc----ccccCCCC
Q psy7539 75 DRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVL----EEKTYPPP 149 (318)
Q Consensus 75 ~~~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~----~E~~~~~p 149 (318)
++.+.++++|+||++||.... ..+..+.+..|+..+.++++++++. +++++|+++|-.+....... .+....+|
T Consensus 69 ~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~ 147 (321)
T PTZ00325 69 LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNSTVPIAAETLKKAGVYDP 147 (321)
T ss_pred chHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHHHhhhhhccCCCh
Confidence 345677999999999998643 3456789999999999999999996 99999999995432211100 11111111
Q ss_pred CChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCC--CCCCcc
Q psy7539 150 VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKD--PLPGWT 223 (318)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~--~~~g~~ 223 (318)
. ..||.+-+..-|+-...++ .+++..-++ +.|+|.+.+ .++-|.
T Consensus 148 ~-----------------------------~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd~s~v~~~S 194 (321)
T PTZ00325 148 R-----------------------------KLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSGVTIVPLLS 194 (321)
T ss_pred h-----------------------------heeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCCcccccchh
Confidence 1 5677664555566555555 577777777 888887654 566664
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00088 Score=59.97 Aligned_cols=120 Identities=12% Similarity=-0.014 Sum_probs=84.9
Q ss_pred HHHHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc----ccccccCCCC
Q psy7539 75 DRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK----VLEEKTYPPP 149 (318)
Q Consensus 75 ~~~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~----~~~E~~~~~p 149 (318)
++...++++|+|||+||.... ..+..+....|+..++++++.+.+. +...+|+++|=-+-+... .+......+|
T Consensus 79 d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~ 157 (323)
T PLN00106 79 QLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVNSTVPIAAEVLKKAGVYDP 157 (323)
T ss_pred CHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCccccHHHHHHHHHHcCCCCc
Confidence 466778999999999998644 3567789999999999999999996 889999998822211000 0001011111
Q ss_pred CChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEeccccccccc-C-CCCCCcccC
Q psy7539 150 VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIW-K-DPLPGWTDN 225 (318)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~-~-~~~~g~~~~ 225 (318)
...||.+++..+++-..+++ .|++..-++. .|+|.+ . +.++-|..-
T Consensus 158 -----------------------------~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~-~ViGeHg~~s~vp~~S~~ 206 (323)
T PLN00106 158 -----------------------------KKLFGVTTLDVVRANTFVAEKKGLDPADVDV-PVVGGHAGITILPLLSQA 206 (323)
T ss_pred -----------------------------ceEEEEecchHHHHHHHHHHHhCCChhheEE-EEEEeCCCccEeeehhcc
Confidence 17899999999999888888 7888877754 466655 4 666777643
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0025 Score=53.06 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=67.0
Q ss_pred CccEEEEcccccC----------cchhHHHHHHHhHHHHHHHHHHHHhc-CC---CccEEEEeccccccCCcccccccCC
Q psy7539 82 TIHIVYHIAATVR----------FDDYMQTYVFLNTRGTRDMLNLSKQM-IH---LQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 82 ~~d~Vih~Aa~~~----------~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~---~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
+-|.|||.||... ....++.+++.|+.+...|...+... ++ .+.+|++||.....+..
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~-------- 153 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFS-------- 153 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhcccc--------
Confidence 4699999999741 12345679999999988888766542 12 26789999965532210
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--c-CCcEEEeccccc
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--A-GMPCMILRPSII 211 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~-~~~~~ilR~~~v 211 (318)
+ | ..|+.+|++-+.+++..+. + +..+..++||.|
T Consensus 154 ---~--------------------------w-a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvv 190 (253)
T KOG1204|consen 154 ---S--------------------------W-AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVV 190 (253)
T ss_pred ---H--------------------------H-HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcc
Confidence 0 1 7899999999999988876 3 778888899866
|
|
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.00054 Score=54.41 Aligned_cols=146 Identities=16% Similarity=0.185 Sum_probs=88.3
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
.-.++|.+. |..|..+.-+.+.-+.. . .+...++.|...|++.. ++....+.
T Consensus 24 ataerlakq--gasv~lldlp~skg~~v--a------------------kelg~~~vf~padvtse------kdv~aala 75 (260)
T KOG1199|consen 24 ATAERLAKQ--GASVALLDLPQSKGADV--A------------------KELGGKVVFTPADVTSE------KDVRAALA 75 (260)
T ss_pred HHHHHHHhc--CceEEEEeCCcccchHH--H------------------HHhCCceEEeccccCcH------HHHHHHHH
Confidence 346778777 88888877754322111 0 34557899999999864 45554443
Q ss_pred -------CccEEEEccccc------Cc-------chhHHHHHHHhHHHHHHHHHHHHh-c------CCCccEEEEecccc
Q psy7539 82 -------TIHIVYHIAATV------RF-------DDYMQTYVFLNTRGTRDMLNLSKQ-M------IHLQLFVYVSTAYC 134 (318)
Q Consensus 82 -------~~d~Vih~Aa~~------~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~------~~~~~~v~~SS~~~ 134 (318)
..|..++|||.- ++ -++.+...++|+.||-|+++.-.- + .+-+|=|.+-|+++
T Consensus 76 ~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasv 155 (260)
T KOG1199|consen 76 KAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASV 155 (260)
T ss_pred HHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeecee
Confidence 579999999972 11 133455778899999999876432 1 12345555555444
Q ss_pred ccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHH----HHhhhcCCcEEEecccc
Q psy7539 135 HPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVV----TEYMEAGMPCMILRPSI 210 (318)
Q Consensus 135 ~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~----~~~~~~~~~~~ilR~~~ 210 (318)
....+..- ...|..||-+.--+. +.....|++++.+-||.
T Consensus 156 aafdgq~g------------------------------------qaaysaskgaivgmtlpiardla~~gir~~tiapgl 199 (260)
T KOG1199|consen 156 AAFDGQTG------------------------------------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGL 199 (260)
T ss_pred eeecCccc------------------------------------hhhhhcccCceEeeechhhhhcccCceEEEeecccc
Confidence 32211100 178888887554333 33333578888888884
Q ss_pred c
Q psy7539 211 I 211 (318)
Q Consensus 211 v 211 (318)
.
T Consensus 200 f 200 (260)
T KOG1199|consen 200 F 200 (260)
T ss_pred c
Confidence 4
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0065 Score=51.82 Aligned_cols=88 Identities=10% Similarity=0.092 Sum_probs=52.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|..... +....+++++..+..+.. .+.+...+
T Consensus 30 ~aLA~~L~~~--G~~V~li~r~~~~~------------------------~~~~~~v~~i~v~s~~~m----~~~l~~~~ 79 (229)
T PRK06732 30 KIIAETFLAA--GHEVTLVTTKTAVK------------------------PEPHPNLSIIEIENVDDL----LETLEPLV 79 (229)
T ss_pred HHHHHHHHhC--CCEEEEEECccccc------------------------CCCCCCeEEEEEecHHHH----HHHHHHHh
Confidence 3688999998 99999998753211 111235666654432210 02344556
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~ 119 (318)
+++|+|||+||...+.... ..-..+...+.++.+++++
T Consensus 80 ~~~DivIh~AAvsd~~~~~-~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 80 KDHDVLIHSMAVSDYTPVY-MTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred cCCCEEEeCCccCCceehh-hhhhhhhhhhhhhhhhhcc
Confidence 6899999999987643322 2223355666677777764
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.11 Score=41.94 Aligned_cols=67 Identities=13% Similarity=0.164 Sum_probs=42.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
.+++.|++. |.+|++..|+.+. ..+..++. .....+..++.+|+++. +++..++
T Consensus 31 aia~~l~~~--G~~V~l~~r~~~~--~~~~~~~l---------------~~~~~~~~~~~~Dl~~~------~~v~~~v~ 85 (169)
T PRK06720 31 NTALLLAKQ--GAKVIVTDIDQES--GQATVEEI---------------TNLGGEALFVSYDMEKQ------GDWQRVIS 85 (169)
T ss_pred HHHHHHHHC--CCEEEEEECCHHH--HHHHHHHH---------------HhcCCcEEEEEccCCCH------HHHHHHHH
Confidence 567888887 8999999885321 11111111 11123567889999876 4555433
Q ss_pred ------cCccEEEEccccc
Q psy7539 81 ------ETIHIVYHIAATV 93 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~ 93 (318)
.++|++||+||..
T Consensus 86 ~~~~~~G~iDilVnnAG~~ 104 (169)
T PRK06720 86 ITLNAFSRIDMLFQNAGLY 104 (169)
T ss_pred HHHHHcCCCCEEEECCCcC
Confidence 3689999999974
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.093 Score=42.83 Aligned_cols=88 Identities=7% Similarity=0.076 Sum_probs=57.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
.+++.|++. |++|+++.|++.. .+.+...+ +. ..++.++.+|++++ +++..+++
T Consensus 14 ~la~~L~~~--G~~V~v~~R~~~~---~~~l~~~l--------------~~-~~~i~~~~~Dv~d~------~sv~~~i~ 67 (177)
T PRK08309 14 RVSLWLCEK--GFHVSVIARREVK---LENVKRES--------------TT-PESITPLPLDYHDD------DALKLAIK 67 (177)
T ss_pred HHHHHHHHC--cCEEEEEECCHHH---HHHHHHHh--------------hc-CCcEEEEEccCCCH------HHHHHHHH
Confidence 467888888 9999999885321 11111100 11 24788899999986 46665554
Q ss_pred -------CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCc----cEEEEec
Q psy7539 82 -------TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQ----LFVYVST 131 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~----~~v~~SS 131 (318)
.+|.+|+.. ++.++.++.++|++. +++ +|+|+=.
T Consensus 68 ~~l~~~g~id~lv~~v---------------h~~~~~~~~~~~~~~-gv~~~~~~~~h~~g 112 (177)
T PRK08309 68 STIEKNGPFDLAVAWI---------------HSSAKDALSVVCREL-DGSSETYRLFHVLG 112 (177)
T ss_pred HHHHHcCCCeEEEEec---------------cccchhhHHHHHHHH-ccCCCCceEEEEeC
Confidence 345666443 455788999999996 888 8887654
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=95.17 E-value=1.7 Score=36.74 Aligned_cols=65 Identities=14% Similarity=0.166 Sum_probs=40.2
Q ss_pred hHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc-
Q psy7539 3 LLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE- 81 (318)
Q Consensus 3 l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~- 81 (318)
+.+.|.+. |.++...-.+ ++...|++++.+ ....--++.+|+++. +++..++.
T Consensus 24 IAk~l~~~--GAeL~fTy~~---e~l~krv~~la~---------------~~~s~~v~~cDV~~d------~~i~~~f~~ 77 (259)
T COG0623 24 IAKALAEQ--GAELAFTYQG---ERLEKRVEELAE---------------ELGSDLVLPCDVTND------ESIDALFAT 77 (259)
T ss_pred HHHHHHHc--CCEEEEEecc---HHHHHHHHHHHh---------------hccCCeEEecCCCCH------HHHHHHHHH
Confidence 45556555 7766555553 244555554422 122344689999876 56666654
Q ss_pred ------CccEEEEccccc
Q psy7539 82 ------TIHIVYHIAATV 93 (318)
Q Consensus 82 ------~~d~Vih~Aa~~ 93 (318)
+.|.++|+-|..
T Consensus 78 i~~~~g~lD~lVHsIaFa 95 (259)
T COG0623 78 IKKKWGKLDGLVHSIAFA 95 (259)
T ss_pred HHHhhCcccEEEEEeccC
Confidence 679999999974
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.068 Score=45.52 Aligned_cols=64 Identities=16% Similarity=0.244 Sum_probs=40.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchh--ccceEEEec--cCCCCCCCCCHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAI--FEKVIPING--DVAVPDLGISAEDR 76 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~g--Dl~~~~~gl~~~~~ 76 (318)
.||++.|+.+ |++|+++.+...... ... ..++..+.+ |+. +.+
T Consensus 33 s~LA~~L~~~--Ga~V~li~g~~~~~~-----------------------~~~~~~~~~~~V~s~~d~~--------~~l 79 (229)
T PRK09620 33 RIIAEELISK--GAHVIYLHGYFAEKP-----------------------NDINNQLELHPFEGIIDLQ--------DKM 79 (229)
T ss_pred HHHHHHHHHC--CCeEEEEeCCCcCCC-----------------------cccCCceeEEEEecHHHHH--------HHH
Confidence 3789999998 999998877432110 001 113334555 443 245
Q ss_pred HHHhc--CccEEEEcccccCcch
Q psy7539 77 QMLSE--TIHIVYHIAATVRFDD 97 (318)
Q Consensus 77 ~~~~~--~~d~Vih~Aa~~~~~~ 97 (318)
.+++. ++|+|||+||..++..
T Consensus 80 ~~~~~~~~~D~VIH~AAvsD~~~ 102 (229)
T PRK09620 80 KSIITHEKVDAVIMAAAGSDWVV 102 (229)
T ss_pred HHHhcccCCCEEEECccccceec
Confidence 66664 6899999999976654
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.25 Score=45.30 Aligned_cols=77 Identities=19% Similarity=0.182 Sum_probs=54.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
.++..|+++ .+.+|++..|+.. ..+++. ....++++.+..|+.+. +.+.++++
T Consensus 15 ~va~~la~~-~d~~V~iAdRs~~---~~~~i~-----------------~~~~~~v~~~~vD~~d~------~al~~li~ 67 (389)
T COG1748 15 VVAHKLAQN-GDGEVTIADRSKE---KCARIA-----------------ELIGGKVEALQVDAADV------DALVALIK 67 (389)
T ss_pred HHHHHHHhC-CCceEEEEeCCHH---HHHHHH-----------------hhccccceeEEecccCh------HHHHHHHh
Confidence 456677777 3369999999633 223332 12234899999999987 57889999
Q ss_pred CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc
Q psy7539 82 TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM 120 (318)
Q Consensus 82 ~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~ 120 (318)
+.|+|||++.... +.+++++|.+.
T Consensus 68 ~~d~VIn~~p~~~---------------~~~i~ka~i~~ 91 (389)
T COG1748 68 DFDLVINAAPPFV---------------DLTILKACIKT 91 (389)
T ss_pred cCCEEEEeCCchh---------------hHHHHHHHHHh
Confidence 9999999997521 12577788774
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.41 Score=43.14 Aligned_cols=57 Identities=9% Similarity=0.014 Sum_probs=41.8
Q ss_pred HHHHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCc-cEEEEec
Q psy7539 75 DRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQ-LFVYVST 131 (318)
Q Consensus 75 ~~~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~v~~SS 131 (318)
++.+.++++|+|||+||.... ..+..+.++.|+.-.+.+.+...+..... .++.+|.
T Consensus 71 ~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 71 DPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred CHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 455677899999999998654 34557899999999999988887752223 3555554
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.21 Score=45.28 Aligned_cols=98 Identities=12% Similarity=0.030 Sum_probs=64.2
Q ss_pred cCccEEEEcccccCcchhH--HHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccCCcccccccCCCCCChhH
Q psy7539 81 ETIHIVYHIAATVRFDDYM--QTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHN 154 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~--~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~ 154 (318)
.++..+|.+-|.++....- .....+.+.-+..|.++.. . .+.+++|.++|....... .
T Consensus 202 ~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~-~~~K~~vIvTSfn~~~~s----------~----- 265 (410)
T PF08732_consen 202 DDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKN-TGNKKLVIVTSFNNNAIS----------S----- 265 (410)
T ss_pred hhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhcc-CCCceEEEEEecCcchhh----------h-----
Confidence 3566777776765433211 1222334444555555554 4 378999999997542210 0
Q ss_pred HHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhc-CCcEEEecccccccccCCC
Q psy7539 155 VIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~ilR~~~v~G~~~~~ 218 (318)
..+|..+|..-|+-+...... --.++|+|||-+.|.+.+.
T Consensus 266 ------------------------~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~~ 306 (410)
T PF08732_consen 266 ------------------------MFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGSI 306 (410)
T ss_pred ------------------------hhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCCC
Confidence 068999999999999888662 2379999999999988763
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >KOG2733|consensus | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.48 Score=42.47 Aligned_cols=77 Identities=17% Similarity=0.238 Sum_probs=50.4
Q ss_pred ChhHHHHHh--hCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH
Q psy7539 1 KVLLEKILR--TCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 1 ~~l~~~Ll~--~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~ 78 (318)
+.+++++++ .+++..+-+..|+ .+..++-|+.+.+... ......+ ++.+|.+++ +++.+
T Consensus 19 ~yivee~v~~~~~~~~slavAGRn--~~KL~~vL~~~~~k~~----------~~ls~~~-i~i~D~~n~------~Sl~e 79 (423)
T KOG2733|consen 19 KYIVEEAVSSQVFEGLSLAVAGRN--EKKLQEVLEKVGEKTG----------TDLSSSV-ILIADSANE------ASLDE 79 (423)
T ss_pred eeeHHHHhhhhcccCceEEEecCC--HHHHHHHHHHHhhccC----------CCcccce-EEEecCCCH------HHHHH
Confidence 356778877 2346677777774 3334444444433210 1222344 889999987 69999
Q ss_pred HhcCccEEEEcccccCcc
Q psy7539 79 LSETIHIVYHIAATVRFD 96 (318)
Q Consensus 79 ~~~~~d~Vih~Aa~~~~~ 96 (318)
+.+.+.+|+||+|+..+.
T Consensus 80 mak~~~vivN~vGPyR~h 97 (423)
T KOG2733|consen 80 MAKQARVIVNCVGPYRFH 97 (423)
T ss_pred HHhhhEEEEeccccceec
Confidence 999999999999986443
|
|
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=92.92 E-value=1.3 Score=38.01 Aligned_cols=163 Identities=15% Similarity=0.136 Sum_probs=89.5
Q ss_pred hhHHHHHhhCCC-c--EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH
Q psy7539 2 VLLEKILRTCEN-V--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 2 ~l~~~Ll~~~~~-~--~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~ 78 (318)
+|+.+|++..+. + .|.+.-|+.+.+ ++- +..++..+ +...-+++++..|+++.. +...
T Consensus 18 ~i~~RLl~~~De~~~ltl~ltcR~~~ka--e~v---------c~~lk~f~--p~~~i~~~yvlvD~sNm~------Sv~~ 78 (341)
T KOG1478|consen 18 AICKRLLAEDDENVRLTLCLTCRNMSKA--EAV---------CAALKAFH--PKSTIEVTYVLVDVSNMQ------SVFR 78 (341)
T ss_pred HHHHHHHhccCCceeEEEEEEeCChhHH--HHH---------HHHHHHhC--CCceeEEEEEEEehhhHH------HHHH
Confidence 478899876223 1 455555654332 221 22222222 434457888999998642 2222
Q ss_pred H-------hcCccEEEEcccccCc----------------------------------chhHHHHHHHhHHHHHHHHHHH
Q psy7539 79 L-------SETIHIVYHIAATVRF----------------------------------DDYMQTYVFLNTRGTRDMLNLS 117 (318)
Q Consensus 79 ~-------~~~~d~Vih~Aa~~~~----------------------------------~~~~~~~~~~Nv~gt~~ll~~a 117 (318)
+ ++..|+|+-.||.... .+...+.+++||-|---+++-.
T Consensus 79 A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l 158 (341)
T KOG1478|consen 79 ASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIREL 158 (341)
T ss_pred HHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhh
Confidence 2 3467999999987411 1223347788888865554433
Q ss_pred Hhc---CCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHH
Q psy7539 118 KQM---IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVT 194 (318)
Q Consensus 118 ~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 194 (318)
... ....++|.+||..+-... .+.+ +++.. +.-.+|..||.+.+.+=.
T Consensus 159 ~pll~~~~~~~lvwtSS~~a~kk~-----------lsle------------D~q~~------kg~~pY~sSKrl~DlLh~ 209 (341)
T KOG1478|consen 159 EPLLCHSDNPQLVWTSSRMARKKN-----------LSLE------------DFQHS------KGKEPYSSSKRLTDLLHV 209 (341)
T ss_pred hhHhhcCCCCeEEEEeeccccccc-----------CCHH------------HHhhh------cCCCCcchhHHHHHHHHH
Confidence 211 233489999996542210 1111 11111 122789999999986655
Q ss_pred Hhhh----cCCcEEEecccccc
Q psy7539 195 EYME----AGMPCMILRPSIII 212 (318)
Q Consensus 195 ~~~~----~~~~~~ilR~~~v~ 212 (318)
+..+ .|+.--++.||...
T Consensus 210 A~~~~~~~~g~~qyvv~pg~~t 231 (341)
T KOG1478|consen 210 ALNRNFKPLGINQYVVQPGIFT 231 (341)
T ss_pred HHhccccccchhhhcccCceee
Confidence 4443 35666677777553
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.36 Score=44.58 Aligned_cols=66 Identities=18% Similarity=0.226 Sum_probs=44.8
Q ss_pred hhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
.+++.|+++ .++ +|++..|+. +++++... .....+++++..|+.++ +++.+++
T Consensus 12 ~~~~~L~~~-~~~~~v~va~r~~------~~~~~~~~-------------~~~~~~~~~~~~d~~~~------~~l~~~~ 65 (386)
T PF03435_consen 12 AIARLLARR-GPFEEVTVADRNP------EKAERLAE-------------KLLGDRVEAVQVDVNDP------ESLAELL 65 (386)
T ss_dssp HHHHHHHCT-TCE-EEEEEESSH------HHHHHHHT---------------TTTTEEEEE--TTTH------HHHHHHH
T ss_pred HHHHHHhcC-CCCCcEEEEECCH------HHHHHHHh-------------hccccceeEEEEecCCH------HHHHHHH
Confidence 466777776 556 899999952 23332211 11346899999999887 6799999
Q ss_pred cCccEEEEccccc
Q psy7539 81 ETIHIVYHIAATV 93 (318)
Q Consensus 81 ~~~d~Vih~Aa~~ 93 (318)
+++|+||||++..
T Consensus 66 ~~~dvVin~~gp~ 78 (386)
T PF03435_consen 66 RGCDVVINCAGPF 78 (386)
T ss_dssp TTSSEEEE-SSGG
T ss_pred hcCCEEEECCccc
Confidence 9999999999874
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=92.14 E-value=0.35 Score=43.52 Aligned_cols=116 Identities=12% Similarity=0.040 Sum_probs=76.8
Q ss_pred HHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCC-c-cEEEEeccccccCCcccccccCCCCCChhH
Q psy7539 78 MLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHL-Q-LFVYVSTAYCHPKEKVLEEKTYPPPVSPHN 154 (318)
Q Consensus 78 ~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~-~-~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~ 154 (318)
+.++++|+||-+||...- ..+..+++..|+.-.+.+.+...+. .. . .+|.+|...-... ....... +
T Consensus 74 ~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~~~~~iiivvsNPvD~~t-~~~~k~s---g----- 143 (322)
T cd01338 74 VAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDV-ASRDVKVLVVGNPCNTNA-LIAMKNA---P----- 143 (322)
T ss_pred HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEEEecCcHHHHH-HHHHHHc---C-----
Confidence 456899999999998532 3456688999999999999999885 42 3 4455553110000 0000000 0
Q ss_pred HHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCC-CCCCcc
Q psy7539 155 VIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKD-PLPGWT 223 (318)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~-~~~g~~ 223 (318)
.+++ ...||.+++..+++....++ .+++...+|..+|+|.+.. ..+.|.
T Consensus 144 --------------~~p~------~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~s~vp~~S 194 (322)
T cd01338 144 --------------DIPP------DNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSPTQYPDFT 194 (322)
T ss_pred --------------CCCh------HheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcccEEEehh
Confidence 0011 17899999999999999988 7899999999889997633 234454
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=88.43 E-value=3.5 Score=37.10 Aligned_cols=55 Identities=7% Similarity=-0.031 Sum_probs=40.7
Q ss_pred HHHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCc-cEEEEe
Q psy7539 76 RQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQ-LFVYVS 130 (318)
Q Consensus 76 ~~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~v~~S 130 (318)
..+.++++|+|||+||.... ..+..+.+..|+.-.+++.....+..+.. .++.+|
T Consensus 70 ~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 70 PEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred hHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 34667899999999998643 34567899999999999999888752233 344454
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=88.05 E-value=0.72 Score=37.89 Aligned_cols=64 Identities=22% Similarity=0.170 Sum_probs=35.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+|+++++.+ |.+|+.+.++.+-. ....++.+...-.+.-+ +.+...+.
T Consensus 34 ~lA~~~~~~--Ga~V~li~g~~~~~--------------------------~p~~~~~i~v~sa~em~----~~~~~~~~ 81 (185)
T PF04127_consen 34 ALAEEAARR--GAEVTLIHGPSSLP--------------------------PPPGVKVIRVESAEEML----EAVKELLP 81 (185)
T ss_dssp HHHHHHHHT--T-EEEEEE-TTS------------------------------TTEEEEE-SSHHHHH----HHHHHHGG
T ss_pred HHHHHHHHC--CCEEEEEecCcccc--------------------------ccccceEEEecchhhhh----hhhccccC
Confidence 578888888 99999998863211 12366666655332100 23344456
Q ss_pred CccEEEEcccccCcch
Q psy7539 82 TIHIVYHIAATVRFDD 97 (318)
Q Consensus 82 ~~d~Vih~Aa~~~~~~ 97 (318)
+.|++||+||..++..
T Consensus 82 ~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 82 SADIIIMAAAVSDFRP 97 (185)
T ss_dssp GGSEEEE-SB--SEEE
T ss_pred cceeEEEecchhheee
Confidence 7899999999987664
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=87.53 E-value=24 Score=32.67 Aligned_cols=35 Identities=9% Similarity=-0.025 Sum_probs=24.7
Q ss_pred CchhHHHHHHHHHHHHhhh----cCCcEEEecccccccc
Q psy7539 180 NGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPI 214 (318)
Q Consensus 180 ~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~ 214 (318)
..-|..|...|..++.... .|.++.++-++-+.-.
T Consensus 238 g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~ 276 (398)
T PRK13656 238 GTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQ 276 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccch
Confidence 4568999999988877665 4666777666655443
|
|
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=87.07 E-value=2.6 Score=43.86 Aligned_cols=91 Identities=18% Similarity=0.299 Sum_probs=65.2
Q ss_pred CccEEEEcccccC-------cchhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccc-cCCcccccccCCCCCCh
Q psy7539 82 TIHIVYHIAATVR-------FDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCH-PKEKVLEEKTYPPPVSP 152 (318)
Q Consensus 82 ~~d~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~-~~~~~~~E~~~~~p~~~ 152 (318)
-+-.|||+|+... .....+..-++-+.||.+|=.+.++. +..+-||..||.++. |+.+
T Consensus 1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~G------------- 1914 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAG------------- 1914 (2376)
T ss_pred cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCc-------------
Confidence 4679999999852 12233445566788999988877764 456788888886553 3211
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEeccccc
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSII 211 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v 211 (318)
-+.||.+.-+.|+++.+-...|+|.+.+--|.+
T Consensus 1915 --------------------------QtNYG~aNS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1915 --------------------------QTNYGLANSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred --------------------------ccccchhhHHHHHHHHHhhhcCCCcceeeeecc
Confidence 188999999999999887667888888776644
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=86.97 E-value=4.8 Score=36.23 Aligned_cols=55 Identities=7% Similarity=0.013 Sum_probs=40.7
Q ss_pred HHHhcCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcCCCc-cEEEEec
Q psy7539 77 QMLSETIHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQMIHLQ-LFVYVST 131 (318)
Q Consensus 77 ~~~~~~~d~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~v~~SS 131 (318)
.+.++++|+|||+||..... .+..+.+..|+.-.+.+.+...+..+.. .++.+|.
T Consensus 70 ~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN 126 (324)
T TIGR01758 70 AVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN 126 (324)
T ss_pred HHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 45678999999999986543 3467889999999999999998852233 4455554
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=86.64 E-value=1.2 Score=37.80 Aligned_cols=19 Identities=16% Similarity=0.366 Sum_probs=15.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEc
Q psy7539 1 KVLLEKILRTCENVKIYILLR 21 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R 21 (318)
++|++.|+++ |++|+++.|
T Consensus 29 ~AIA~~la~~--Ga~Vvlv~~ 47 (227)
T TIGR02114 29 KIITETFLSA--GHEVTLVTT 47 (227)
T ss_pred HHHHHHHHHC--CCEEEEEcC
Confidence 3688999988 999988866
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=85.35 E-value=2.2 Score=38.17 Aligned_cols=56 Identities=13% Similarity=0.027 Sum_probs=46.0
Q ss_pred HHHHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEec
Q psy7539 75 DRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 131 (318)
Q Consensus 75 ~~~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS 131 (318)
++.+.++++|+||-++|.... ..+..+++..|...+.++++.+.+. +.+++|.+.|
T Consensus 62 d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvs 118 (312)
T PRK05086 62 DPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIIT 118 (312)
T ss_pred CHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence 344556899999999998533 3456688999999999999999996 8889998888
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=84.41 E-value=9 Score=33.22 Aligned_cols=80 Identities=11% Similarity=0.283 Sum_probs=47.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+.|++.|.+. |++|++.+|........ . ......++.|-+. . +++..++
T Consensus 13 r~la~~L~~~--g~~v~~s~~t~~~~~~~---------------------~-~~g~~~v~~g~l~-~------~~l~~~l 61 (256)
T TIGR00715 13 RAIAKGLIAQ--GIEILVTVTTSEGKHLY---------------------P-IHQALTVHTGALD-P------QELREFL 61 (256)
T ss_pred HHHHHHHHhC--CCeEEEEEccCCccccc---------------------c-ccCCceEEECCCC-H------HHHHHHH
Confidence 3578888887 89999999975433110 0 0112334444332 2 4676666
Q ss_pred c--CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCc
Q psy7539 81 E--TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQ 124 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~ 124 (318)
+ ++|+|||++.. +. ..-+.++.++|.+. ++.
T Consensus 62 ~~~~i~~VIDAtHP------fA------~~is~~a~~a~~~~-~ip 94 (256)
T TIGR00715 62 KRHSIDILVDATHP------FA------AQITTNATAVCKEL-GIP 94 (256)
T ss_pred HhcCCCEEEEcCCH------HH------HHHHHHHHHHHHHh-CCc
Confidence 5 69999999854 21 23355667777775 443
|
This enzyme was found to be a monomer by gel filtration. |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=83.19 E-value=34 Score=33.52 Aligned_cols=22 Identities=18% Similarity=0.230 Sum_probs=18.7
Q ss_pred CCCCchhHHHHHHHHHHHHhhh
Q psy7539 177 DFPNGYAYTKCLCEGVVTEYME 198 (318)
Q Consensus 177 ~~~~~Y~~sK~~~E~~~~~~~~ 198 (318)
+....|+.+|...|.++..+..
T Consensus 561 GgDGaYgEsK~aldav~~RW~s 582 (866)
T COG4982 561 GGDGAYGESKLALDAVVNRWHS 582 (866)
T ss_pred CCCcchhhHHHHHHHHHHHhhc
Confidence 4448999999999999988865
|
|
| >PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria | Back alignment and domain information |
|---|
Probab=82.48 E-value=8 Score=33.48 Aligned_cols=54 Identities=20% Similarity=0.249 Sum_probs=32.1
Q ss_pred cceEEEeccCCCCCCCCCHHHHHHHhcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecc
Q psy7539 55 EKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA 132 (318)
Q Consensus 55 ~~i~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~ 132 (318)
+.|-++.|+..+ +...+.+.+|++++.- +...-..+..+|.++ +.+.|||+|..
T Consensus 87 pDIl~ia~~~~E--------Dp~~i~~~aDi~~~~D---------------~~~~G~~i~~~Ak~m-GAktFVh~sfp 140 (275)
T PF12683_consen 87 PDILLIAGEPHE--------DPEVISSAADIVVNPD---------------EISRGYTIVWAAKKM-GAKTFVHYSFP 140 (275)
T ss_dssp TTSEEEESS--S---------HHHHHHHSSEEEE-----------------HHHHHHHHHHHHHHT-T-S-EEEEEET
T ss_pred CCeEEEcCCCcC--------CHHHHhhccCeEeccc---------------hhhccHHHHHHHHHc-CCceEEEEech
Confidence 466666666553 2334445667777632 234455788999997 99999999984
|
They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 318 | ||||
| 4dqv_A | 478 | Crystal Structure Of Reductase (R) Domain Of Non-Ri | 5e-07 |
| >pdb|4DQV|A Chain A, Crystal Structure Of Reductase (R) Domain Of Non-Ribosomal Peptide Synthetase From Mycobacterium Tuberculosis Length = 478 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 185 bits (470), Expect = 5e-55
Identities = 56/309 (18%), Positives = 121/309 (39%), Gaps = 32/309 (10%)
Query: 1 KVLLEKILRTCE-NVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP 59
+ L+ ++LR + + ++ L+R + ++++R RLE+ F S E L+ + +A +++
Sbjct: 87 RYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAA--DRLEV 144
Query: 60 INGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQ 119
+ GD + PDLG+ + L+ET+ ++ AA V Y + + N GT +++ ++
Sbjct: 145 VAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFG-PNVAGTAELIRIALT 203
Query: 120 MIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179
L+ F YVSTA + P E A++ + +
Sbjct: 204 T-KLKPFTYVSTADVG------------AAIEPSAFTEDADIRVISPTRTVDGGW----A 246
Query: 180 NGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA-- 236
GY +K E ++ E + +P + R +I + G + + T +++
Sbjct: 247 GGYGTSKWAGEVLLREANDLCALPVAVFRCGMI--LADTSYAGQLNMSDWVTRMVLSLMA 304
Query: 237 ------GKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF 290
+ D LPV + + + + ++ D
Sbjct: 305 TGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDD 364
Query: 291 QITWYDIIE 299
I + ++
Sbjct: 365 GIGLDEYVD 373
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 2e-12
Identities = 27/190 (14%), Positives = 47/190 (24%), Gaps = 45/190 (23%)
Query: 83 IHIVYHIAATVRFD-DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA---YCHPKE 138
+ V A Q V T Q + +YV +A HP+
Sbjct: 78 LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQG 136
Query: 139 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME 198
E + + + Y K + E
Sbjct: 137 LPGHEGLFYDSLP-------------------------SGKSSYVLCKWALDEQAREQAR 171
Query: 199 AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVD 258
G+P +I P +++ G D ++ G G + Y +D
Sbjct: 172 NGLPVVIGIPGMVL--------GELDIGPTTGRVITAIGNGEMT-HYVAGQRNV----ID 218
Query: 259 V--LVNGVLL 266
G+L+
Sbjct: 219 AAEAGRGLLM 228
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 33/251 (13%), Positives = 74/251 (29%), Gaps = 57/251 (22%)
Query: 50 ESAIFEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATV------RFDDYMQTYV 103
+ V D++ P +++ +++H+AA V FD +
Sbjct: 59 PAGFSGAVDARAADLSAPGE-----AEKLVEARPDVIFHLAAIVSGEAELDFDKGYR--- 110
Query: 104 FLNTRGTRDMLNLSKQ----MIHLQLFVYVSTA--YCHPKEKVLEEKTYPPPVSPHNVIE 157
+N GTR + + + + V+ S+ + P + ++ + P++
Sbjct: 111 -INLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTS----- 164
Query: 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-GMPCMILR-PSIIIPIW 215
Y K +CE ++++Y + +R P+I I
Sbjct: 165 ------------------------YGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRP- 199
Query: 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNP 275
P + + +L G + S V L+
Sbjct: 200 GKPNAAASGFFS---NILREPLVGQEAVLPVPESIRHWHASPRSAVGF-LIHGAMIDVEK 255
Query: 276 GNTMRVINLTA 286
R +++
Sbjct: 256 VGPRRNLSMPG 266
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 33/243 (13%), Positives = 60/243 (24%), Gaps = 58/243 (23%)
Query: 60 INGDVAVPDLGISAEDRQMLSETIH---IVYHIAATVRFDDYMQ---TYVFLNTRGTRDM 113
+ D +L+ V+H+A + NT T +
Sbjct: 83 SETSIT---------DDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKL 133
Query: 114 LNLSKQMIHLQLFVYVSTA--YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLK 171
K L+ VY + + VS HN
Sbjct: 134 YERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHN----------------- 176
Query: 172 QELLQDFPNG-YAYTKCLCEGVVTEYMEA-GMPCMILRPS-IIIPIWKDPLPGWTDNING 228
+ Y+ +K E Y + +P + R + P W
Sbjct: 177 -------NDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPAT 229
Query: 229 PTGLLIG-------AGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRV 281
+ G + + DF+ V+ + NG++ + G V
Sbjct: 230 VWRNVTPTFIYKALKGMPL--PLENGGVATRDFIFVEDVANGLIA-----CAADGTPGGV 282
Query: 282 INL 284
N+
Sbjct: 283 YNI 285
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 5e-04
Identities = 26/145 (17%), Positives = 40/145 (27%), Gaps = 40/145 (27%)
Query: 71 ISAEDRQMLSETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFV 127
+ ED + V H+AAT N T+++ + + ++ V
Sbjct: 51 YTLEDLINQLNDVDAVVHLAATRGSQGKISEFHD----NEILTQNLYDACYEN-NISNIV 105
Query: 128 YVSTA--YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYT 185
Y ST Y EK P P Y +
Sbjct: 106 YASTISAYSDETSLPWNEKELPLPDLM-----------------------------YGVS 136
Query: 186 KCLCEGVVTEYMEA-GMPCMILRPS 209
K CE + Y G+ LR +
Sbjct: 137 KLACEHIGNIYSRKKGLCIKNLRFA 161
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 318 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.98 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.97 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.97 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.97 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.97 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.97 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.97 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.97 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.97 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.97 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.97 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.97 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.97 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.97 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.97 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.97 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.96 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.96 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.96 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.96 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.96 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.96 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.96 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.96 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.96 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.96 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.96 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.96 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.96 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.96 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.96 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.96 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.95 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.95 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.95 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.95 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.95 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.95 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.95 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.95 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.95 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.95 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.95 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.94 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.94 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.94 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.94 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.94 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.94 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.94 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.94 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.94 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.93 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.93 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.93 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.93 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.93 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.93 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.92 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.92 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.92 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.92 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.91 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.91 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.91 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.91 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.91 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.9 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.9 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.9 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.89 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.87 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.87 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.86 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.86 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.85 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.84 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.84 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.84 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.83 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.83 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.81 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.81 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.81 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.8 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.77 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.76 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.76 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.73 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.7 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.7 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.7 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.69 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.68 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.67 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.67 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.67 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.67 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.66 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.65 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.65 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.65 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.65 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.64 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.64 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.64 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.64 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.63 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.63 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.63 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.63 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.63 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.63 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.63 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.62 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.62 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.62 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.62 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.62 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.62 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.61 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.61 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.61 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.61 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.61 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.61 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.61 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.61 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.6 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.6 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.6 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.6 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.6 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.6 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.6 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.6 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.59 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.59 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.59 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.59 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.59 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.58 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.58 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.58 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.58 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.58 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.58 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.58 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.58 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.57 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.57 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.57 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.57 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.57 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.57 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.56 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.56 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.56 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.56 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.56 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.56 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.56 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.56 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.56 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.56 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.56 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.55 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.55 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.55 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.55 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.55 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.55 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.55 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.55 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.55 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.55 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.55 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.54 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.54 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.54 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.54 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.54 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.54 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.54 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.54 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.54 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.54 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.54 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.54 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.54 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.53 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.53 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.53 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.53 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.53 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.53 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.53 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.53 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.53 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.53 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.53 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.53 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.53 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.52 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.52 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.52 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.52 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.52 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.52 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.52 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.51 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.51 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.51 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.51 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.51 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.51 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.51 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.51 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.5 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.5 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.5 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.5 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.49 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.49 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.49 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.49 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.49 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.48 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.48 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.48 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.48 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.48 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.48 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.48 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.48 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.48 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.47 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.47 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.47 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.47 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.47 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.47 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.47 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.46 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.46 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.46 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.46 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.46 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.46 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.45 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.45 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.45 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.45 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.45 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.44 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.44 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.44 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.44 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.44 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.44 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.43 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.43 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.43 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.43 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.42 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.42 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.41 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.41 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.37 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.36 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.36 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.36 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.34 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.34 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.33 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.33 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.33 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.32 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.31 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.3 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.3 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.3 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.27 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.24 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.24 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.23 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.2 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.2 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.18 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.17 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.16 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.16 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.15 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.14 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.13 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.04 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.03 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.94 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.92 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.72 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.64 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.62 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.59 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.46 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.45 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.44 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.33 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.32 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.21 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.17 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.17 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.01 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 97.05 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 96.8 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 96.64 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 96.52 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 96.3 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 95.39 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 95.39 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 92.86 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 91.93 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 91.16 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 89.57 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 89.27 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 88.19 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 87.99 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 87.43 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 87.09 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 86.52 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 86.25 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 85.44 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 85.32 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 81.72 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-31 Score=237.96 Aligned_cols=248 Identities=20% Similarity=0.135 Sum_probs=195.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|..+.. .+.+...... . ......+++++.+|++++ +.+..++
T Consensus 39 ~~l~~~L~~~--g~~V~~~~r~~~~~--~~~~~~~~~~---------~-~~~~~~~~~~~~~Dl~d~------~~~~~~~ 98 (351)
T 3ruf_A 39 SNLLEKLLKL--NQVVIGLDNFSTGH--QYNLDEVKTL---------V-STEQWSRFCFIEGDIRDL------TTCEQVM 98 (351)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSSCC--HHHHHHHHHT---------S-CHHHHTTEEEEECCTTCH------HHHHHHT
T ss_pred HHHHHHHHHC--CCEEEEEeCCCCCc--hhhhhhhhhc---------c-ccccCCceEEEEccCCCH------HHHHHHh
Confidence 4789999998 89999999975533 1222211100 0 011126899999999986 6899999
Q ss_pred cCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~ 155 (318)
+++|+|||+||..... .....++++|+.|+.+|+++|.+. ++++|||+||.++|+... +++|+.+..|.
T Consensus 99 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~----- 172 (351)
T 3ruf_A 99 KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSSTYGDHPALPKVEENIGNPL----- 172 (351)
T ss_dssp TTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC-----
T ss_pred cCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHHhcCCCCCCCCccCCCCCCC-----
Confidence 9999999999975433 334568899999999999999996 899999999999987643 67787666554
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLI 234 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~ 234 (318)
+.|+.+|+++|+++..+.+ .|++++++||+++||+...+...+ ......++.
T Consensus 173 ------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~---~~~~~~~~~ 225 (351)
T 3ruf_A 173 ------------------------SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAY---AAVIPKWTA 225 (351)
T ss_dssp ------------------------SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTT---CCHHHHHHH
T ss_pred ------------------------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcch---hhHHHHHHH
Confidence 8999999999999999887 799999999999999765442111 011245677
Q ss_pred HHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhh-ccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcc
Q psy7539 235 GAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN-FLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARN 307 (318)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~-~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~ 307 (318)
.+..+....+++++.+.++|+|++|+|++++.++.+ +.. .+++||++++ .++++.|+++.+.+.+|.
T Consensus 226 ~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~----~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 293 (351)
T 3ruf_A 226 AMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSA----KDNIYNVAVG--DRTTLNELSGYIYDELNL 293 (351)
T ss_dssp HHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGG----CSEEEEESCS--CCEEHHHHHHHHHHHHHT
T ss_pred HHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhcccc----CCCEEEeCCC--CcccHHHHHHHHHHHhCc
Confidence 777777667788999999999999999999999987 233 3889999999 899999999999999966
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.8e-31 Score=236.29 Aligned_cols=229 Identities=20% Similarity=0.128 Sum_probs=190.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+.. . ..+++++.+|++ + +.+..++
T Consensus 16 ~~l~~~L~~~--g~~V~~~~r~~~~~------------------------~--~~~~~~~~~Dl~-~------~~~~~~~ 60 (311)
T 3m2p_A 16 QYVVESIKND--GNTPIILTRSIGNK------------------------A--INDYEYRVSDYT-L------EDLINQL 60 (311)
T ss_dssp HHHHHHHHHT--TCEEEEEESCCC-------------------------------CCEEEECCCC-H------HHHHHHT
T ss_pred HHHHHHHHhC--CCEEEEEeCCCCcc------------------------c--CCceEEEEcccc-H------HHHHHhh
Confidence 4789999998 99999999973221 1 237889999998 6 6899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNVIEK 158 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~~~~ 158 (318)
+++|+|||+||..... .+...+++|+.++.+++++|++. ++++|||+||.++|+... +++|+.+..|.
T Consensus 61 ~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~-------- 130 (311)
T 3m2p_A 61 NDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETSLPWNEKELPLPD-------- 130 (311)
T ss_dssp TTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGGCSBCTTSCCCCS--------
T ss_pred cCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCCCCCCCCCCCCCC--------
Confidence 9999999999987655 44567899999999999999995 899999999999988643 67787665554
Q ss_pred HhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHh
Q psy7539 159 AELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAG 237 (318)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~ 237 (318)
+.|+.+|+++|+++..+.+ .+++++++||+.+||+...+. .....++..+.
T Consensus 131 ---------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~ 182 (311)
T 3m2p_A 131 ---------------------LMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-------YMINRFFRQAF 182 (311)
T ss_dssp ---------------------SHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-------CHHHHHHHHHH
T ss_pred ---------------------chhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-------CHHHHHHHHHH
Confidence 8999999999999999887 899999999999999764321 12345677777
Q ss_pred cCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 238 KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
.+....+++++++.++|+|++|+|++++.+++++.. +++||++++ .++++.|+++.+.+.+|.+.
T Consensus 183 ~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~-----~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (311)
T 3m2p_A 183 HGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKV-----SGTFNIGSG--DALTNYEVANTINNAFGNKD 247 (311)
T ss_dssp TCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTC-----CEEEEECCS--CEECHHHHHHHHHHHTTCTT
T ss_pred cCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCC-----CCeEEeCCC--CcccHHHHHHHHHHHhCCCC
Confidence 777777778999999999999999999999988753 789999998 89999999999999997654
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=233.01 Aligned_cols=243 Identities=17% Similarity=0.139 Sum_probs=191.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|++++..++|+++.|....... +.+.. ....++++++.+|++++ +.+..++
T Consensus 38 ~~l~~~L~~~g~~~~v~~~~~~~~~~~~-~~l~~----------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 94 (346)
T 4egb_A 38 SNFVHYMLQSYETYKIINFDALTYSGNL-NNVKS----------------IQDHPNYYFVKGEIQNG------ELLEHVI 94 (346)
T ss_dssp HHHHHHHHHHCTTEEEEEEECCCTTCCG-GGGTT----------------TTTCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHhhCCCcEEEEEeccccccch-hhhhh----------------hccCCCeEEEEcCCCCH------HHHHHHH
Confidence 3789999999222799999886532221 01100 11125899999999987 6888888
Q ss_pred cC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC---cccccccCCCCCCh
Q psy7539 81 ET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE---KVLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~---~~~~E~~~~~p~~~ 152 (318)
++ +|+|||+||..... ..+..++++|+.|+.+++++|++. ++++|||+||.++|+.. .+++|+.+..|.
T Consensus 95 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~-- 171 (346)
T 4egb_A 95 KERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDEVYGSLGKTGRFTEETPLAPN-- 171 (346)
T ss_dssp HHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCC--
T ss_pred hhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchHHhCCCCcCCCcCCCCCCCCC--
Confidence 86 99999999986443 344578999999999999999996 89999999999998864 367787666554
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
+.|+.+|+++|+++..+.+ .|++++++||+.+||+...+. .....
T Consensus 172 ---------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~ 217 (346)
T 4egb_A 172 ---------------------------SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-------KLIPL 217 (346)
T ss_dssp ---------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-------SHHHH
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-------chHHH
Confidence 8999999999999999887 799999999999999754321 12345
Q ss_pred HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 232 LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
++..+..+....+++++.+.++|+|++|+|++++.++.++.. +++||++++ .++++.|+++.+.+.+|.+.|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~-----g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~~ 289 (346)
T 4egb_A 218 MVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRV-----GEVYNIGGN--NEKTNVEVVEQIITLLGKTKK 289 (346)
T ss_dssp HHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCT-----TCEEEECCS--CCEEHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCC-----CCEEEECCC--CceeHHHHHHHHHHHhCCCcc
Confidence 677777777667778999999999999999999999998764 789999999 889999999999999976543
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=234.86 Aligned_cols=253 Identities=15% Similarity=0.074 Sum_probs=192.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCC-CCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVA-VPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~-~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ +|++|++++|+.+.... .....+++++.+|++ ++ +.+..+
T Consensus 38 ~~l~~~L~~~-~g~~V~~~~r~~~~~~~----------------------~~~~~~v~~~~~Dl~~d~------~~~~~~ 88 (372)
T 3slg_A 38 HHLSKRILET-TDWEVFGMDMQTDRLGD----------------------LVKHERMHFFEGDITINK------EWVEYH 88 (372)
T ss_dssp HHHHHHHHHH-SSCEEEEEESCCTTTGG----------------------GGGSTTEEEEECCTTTCH------HHHHHH
T ss_pred HHHHHHHHhC-CCCEEEEEeCChhhhhh----------------------hccCCCeEEEeCccCCCH------HHHHHH
Confidence 3789999987 67899999997543311 111258999999998 65 678888
Q ss_pred hcCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhH
Q psy7539 80 SETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHN 154 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~ 154 (318)
++++|+|||+||..... ......+++|+.|+.+|+++|++. + ++|||+||.++|+... +++|+..+.+..+.
T Consensus 89 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~- 165 (372)
T 3slg_A 89 VKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCADEQFDPDASALTYGPI- 165 (372)
T ss_dssp HHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCT-
T ss_pred hccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHHHhCCCCCCCCCccccccccCCC-
Confidence 89999999999986543 345578899999999999999996 6 9999999998887633 55665433110000
Q ss_pred HHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCc-hHHHH
Q psy7539 155 VIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNING-PTGLL 233 (318)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~-~~~~~ 233 (318)
..+.+.|+.+|+++|+++..+.+.+++++++||+++||+...+..++.....+ ...++
T Consensus 166 ---------------------~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~ 224 (372)
T 3slg_A 166 ---------------------NKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFL 224 (372)
T ss_dssp ---------------------TCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHH
T ss_pred ---------------------CCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHH
Confidence 00116899999999999999876689999999999999876543221111111 23466
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC-CCCCceeHHHHHHHHHHhhcccCC
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA-NKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~-~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
..+..+....+++++.+.++|+|++|+|++++.++.++... ..+++||+++ + .++|+.|+++.+.+.+|.+.+
T Consensus 225 ~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~--~~~~~~ni~~~~--~~~s~~e~~~~i~~~~g~~~~ 298 (372)
T 3slg_A 225 GHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGV--ATGKIYNIGNPN--NNFSVRELANKMLELAAEFPE 298 (372)
T ss_dssp HHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGT--TTTEEEEECCTT--CEEEHHHHHHHHHHHHHHCTT
T ss_pred HHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCc--CCCceEEeCCCC--CCccHHHHHHHHHHHhCCCcc
Confidence 67777776677888999999999999999999999987510 1378999999 5 699999999999999976543
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-29 Score=224.80 Aligned_cols=249 Identities=15% Similarity=0.104 Sum_probs=189.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCH-HHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNS-RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~-~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|+++.|....... .+++. .....+++++.+|++++ +.+..+
T Consensus 19 ~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~-----------------~~~~~~~~~~~~Dl~d~------~~~~~~ 73 (341)
T 3enk_A 19 SHTAVELLAH--GYDVVIADNLVNSKREAIARIE-----------------KITGKTPAFHETDVSDE------RALARI 73 (341)
T ss_dssp HHHHHHHHHT--TCEEEEECCCSSSCTHHHHHHH-----------------HHHSCCCEEECCCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--CCcEEEEecCCcchHHHHHHHH-----------------hhcCCCceEEEeecCCH------HHHHHH
Confidence 4789999998 9999999997654432 12221 11235789999999986 688888
Q ss_pred hc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCCh
Q psy7539 80 SE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSP 152 (318)
Q Consensus 80 ~~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~ 152 (318)
++ ++|+|||+||..... ....+.++.|+.++.+++++|++. ++++|||+||.++++... +++|+.+..|.
T Consensus 74 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~-- 150 (341)
T 3enk_A 74 FDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSATVYGVPERSPIDETFPLSAT-- 150 (341)
T ss_dssp HHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGBCSCSSSSBCTTSCCBCS--
T ss_pred HhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecceEecCCCCCCCCCCCCCCCC--
Confidence 87 899999999986533 234478899999999999999995 889999999998887643 67776655554
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-c-CCcEEEecccccccccCCCCCCcccCC--Cc
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-A-GMPCMILRPSIIIPIWKDPLPGWTDNI--NG 228 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~-~~~~~ilR~~~v~G~~~~~~~g~~~~~--~~ 228 (318)
+.|+.||+++|++++.+.. . +++++++||+++||+...+..|....- ..
T Consensus 151 ---------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~ 203 (341)
T 3enk_A 151 ---------------------------NPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNN 203 (341)
T ss_dssp ---------------------------SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSS
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccc
Confidence 8999999999999998876 4 499999999999998654433321111 12
Q ss_pred hHHHHHHHhcC--ceeeEec------CCCcccCcchHHHHHHHHHHHhhhc--cCCCCCCCcEEEeeCCCCCceeHHHHH
Q psy7539 229 PTGLLIGAGKG--IIRTMYC------DYSTCADFLPVDVLVNGVLLSTWNF--LSNPGNTMRVINLTANKDFQITWYDII 298 (318)
Q Consensus 229 ~~~~~~~~~~~--~~~~~~~------~~~~~~~~v~v~Dva~~~~~~~~~~--~~~~~~~~~~~ni~~~~~~~~~~~el~ 298 (318)
...++.....+ ....+++ ++.+.++|+|++|+|++++.++.+. .. .+++||++++ .++++.|++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~----~~~~~ni~~~--~~~s~~e~~ 277 (341)
T 3enk_A 204 LMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRD----ASLTVNLGTG--RGYSVLEVV 277 (341)
T ss_dssp HHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHT----SCEEEEESCS--CCEEHHHHH
T ss_pred hHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCC----cceEEEeCCC--CceeHHHHH
Confidence 22344444443 2233455 7899999999999999999999873 22 3789999998 899999999
Q ss_pred HHHHHhhcccCC
Q psy7539 299 ENGKDIARNKVP 310 (318)
Q Consensus 299 ~~i~~~~~~~~p 310 (318)
+.+.+.+|.+.|
T Consensus 278 ~~i~~~~g~~~~ 289 (341)
T 3enk_A 278 RAFEKASGRAVP 289 (341)
T ss_dssp HHHHHHHCSCCC
T ss_pred HHHHHHhCCCcc
Confidence 999999976544
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=244.48 Aligned_cols=280 Identities=20% Similarity=0.275 Sum_probs=196.4
Q ss_pred ChhHHHHHhhCC-CcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCE-NVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~-~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++.+ |++|++++|+++.....+++.+.+.......+.... .....+++++.+|++++.+|++.+.+..+
T Consensus 87 ~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~v~~v~~Dl~~~~~gld~~~~~~~ 164 (478)
T 4dqv_A 87 RYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFK--ELAADRLEVVAGDKSEPDLGLDQPMWRRL 164 (478)
T ss_dssp HHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHH--HHHTTTEEEEECCTTSGGGGCCHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhh--hhccCceEEEEeECCCcccCCCHHHHHHH
Confidence 368999998733 579999999876665666666555432111111111 22346899999999999999999999999
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHHHH
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~~~ 157 (318)
++++|+|||+||.... .++.+.+++|+.||.+++++|.+. ++++|||+||.++++... .++|+....|.++.
T Consensus 165 ~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~---- 238 (478)
T 4dqv_A 165 AETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAIEPSAFTEDADIRVISPT---- 238 (478)
T ss_dssp HHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCE----
T ss_pred HcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehhhcCccCCCCcCCcccccccCcc----
Confidence 9999999999999876 555578899999999999999985 889999999998877532 45554322111000
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccC-CCCCCcccCCCc-hHHHHH
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWK-DPLPGWTDNING-PTGLLI 234 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~-~~~~g~~~~~~~-~~~~~~ 234 (318)
......+.+.|+.||+++|++++.+.+ .|++++++||++|||+.. .+.. +... ...++.
T Consensus 239 --------------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~----~~~~~~~~l~~ 300 (478)
T 4dqv_A 239 --------------RTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQL----NMSDWVTRMVL 300 (478)
T ss_dssp --------------EECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCC----CTTBHHHHHHH
T ss_pred --------------cccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcC----CHHHHHHHHHH
Confidence 000011226799999999999999987 799999999999999753 1111 1111 122333
Q ss_pred HHhc-Cceee-EecC------CCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCc--eeHHHHHHHHHHh
Q psy7539 235 GAGK-GIIRT-MYCD------YSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQ--ITWYDIIENGKDI 304 (318)
Q Consensus 235 ~~~~-~~~~~-~~~~------~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~--~~~~el~~~i~~~ 304 (318)
.... |..+. +... +++.++|+||+|+|++++.++.+........+++||++++ .+ +++.|+++.+.+.
T Consensus 301 ~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~--~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 301 SLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNP--HDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp HHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCC--CCSSCSHHHHHHHHHHT
T ss_pred HHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCC--CCCCcCHHHHHHHHHHc
Confidence 3322 33221 1111 2678999999999999999987621111124789999998 66 9999999999986
Q ss_pred hcccC
Q psy7539 305 ARNKV 309 (318)
Q Consensus 305 ~~~~~ 309 (318)
|.+.
T Consensus 379 -g~~~ 382 (478)
T 4dqv_A 379 -GYPI 382 (478)
T ss_dssp -TCSC
T ss_pred -CCCc
Confidence 4554
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-29 Score=224.08 Aligned_cols=250 Identities=19% Similarity=0.134 Sum_probs=191.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|..... .+++..... .+. .....+++++.+|++++ +.+..++
T Consensus 41 ~~l~~~L~~~--g~~V~~~~r~~~~~--~~~~~~~~~-----~~~-----~~~~~~~~~~~~Dl~d~------~~~~~~~ 100 (352)
T 1sb8_A 41 SNLLETLLKL--DQKVVGLDNFATGH--QRNLDEVRS-----LVS-----EKQWSNFKFIQGDIRNL------DDCNNAC 100 (352)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSSCC--HHHHHHHHH-----HSC-----HHHHTTEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCCccc--hhhHHHHhh-----hcc-----cccCCceEEEECCCCCH------HHHHHHh
Confidence 3789999998 89999999975422 122222110 000 00125789999999976 6788899
Q ss_pred cCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~ 155 (318)
+++|+|||+||..... ..+...+++|+.|+.+++++|.+. ++++|||+||.++++... +++|+.+..|.
T Consensus 101 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~----- 174 (352)
T 1sb8_A 101 AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGLPKVEDTIGKPL----- 174 (352)
T ss_dssp TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC-----
T ss_pred cCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhcCCCCCCCCCCCCCCCCC-----
Confidence 9999999999976432 345678999999999999999985 889999999999887643 67776655544
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc-hHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING-PTGLL 233 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~-~~~~~ 233 (318)
+.|+.+|+++|+++..+.+ .+++++++||+.+||+...+... ... ...++
T Consensus 175 ------------------------~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~ 226 (352)
T 1sb8_A 175 ------------------------SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGA----YAAVIPKWT 226 (352)
T ss_dssp ------------------------SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCST----TCCHHHHHH
T ss_pred ------------------------ChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcc----hhhHHHHHH
Confidence 8999999999999998876 69999999999999976543210 111 23456
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc-cCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh---cccC
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF-LSNPGNTMRVINLTANKDFQITWYDIIENGKDIA---RNKV 309 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~-~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~---~~~~ 309 (318)
..+..+....+++++.+.++|+|++|+|++++.++... .. .+++||++++ .++++.|+++.+.+.+ |.+.
T Consensus 227 ~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~----~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~g~~~ 300 (352)
T 1sb8_A 227 SSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDA----RNQVYNIAVG--GRTSLNQLFFALRDGLAENGVSY 300 (352)
T ss_dssp HHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGG----CSEEEEESCS--CCEEHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccC----CCceEEeCCC--CCccHHHHHHHHHHHHHhcCCCC
Confidence 66666765567788999999999999999999988762 22 3789999998 8999999999999998 7655
Q ss_pred C
Q psy7539 310 P 310 (318)
Q Consensus 310 p 310 (318)
+
T Consensus 301 ~ 301 (352)
T 1sb8_A 301 H 301 (352)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-28 Score=220.67 Aligned_cols=245 Identities=18% Similarity=0.225 Sum_probs=186.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|...... .....+++++.+|++++ +.+..++
T Consensus 15 ~~l~~~L~~~--g~~V~~~~r~~~~~~-----------------------~~~~~~~~~~~~D~~~~------~~~~~~~ 63 (330)
T 2c20_A 15 SHAVKKLVDE--GLSVVVVDNLQTGHE-----------------------DAITEGAKFYNGDLRDK------AFLRDVF 63 (330)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSSCCG-----------------------GGSCTTSEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCEEEEEeCCCcCch-----------------------hhcCCCcEEEECCCCCH------HHHHHHH
Confidence 3789999998 899999999654321 11123788999999986 6788888
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC--cccccccCCCCCChh
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~--~~~~E~~~~~p~~~~ 153 (318)
+ ++|+|||+||..... ..+...+++|+.|+.+++++|.+. ++++|||+||.++++.. .+++|+.+..|.
T Consensus 64 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~--- 139 (330)
T 2c20_A 64 TQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYGEVDVDLITEETMTNPT--- 139 (330)
T ss_dssp HHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGCSCSSSSBCTTSCCCCS---
T ss_pred hhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeCCCCCCCCCcCCCCCCC---
Confidence 8 899999999986532 345678999999999999999985 88999999999888753 267776655544
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccC-CCchHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDN-INGPTG 231 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~-~~~~~~ 231 (318)
+.|+.+|+++|+++..+.+ .+++++++||+++||+...+..|.... ......
T Consensus 140 --------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~ 193 (330)
T 2c20_A 140 --------------------------NTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIP 193 (330)
T ss_dssp --------------------------SHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHH
T ss_pred --------------------------ChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHH
Confidence 8999999999999999877 689999999999999865433322111 112222
Q ss_pred HHHHHhcC--ceeeEec------CCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHH
Q psy7539 232 LLIGAGKG--IIRTMYC------DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKD 303 (318)
Q Consensus 232 ~~~~~~~~--~~~~~~~------~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~ 303 (318)
.+.....+ ....+++ ++++.++|+|++|+|++++.++++.... ..+++||++++ .++++.|+++.+.+
T Consensus 194 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~--~~~~~~ni~~~--~~~s~~e~~~~i~~ 269 (330)
T 2c20_A 194 LVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNG--GESDFYNLGNG--NGFSVKEIVDAVRE 269 (330)
T ss_dssp HHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTT--CCCEEEECCCT--TCBCHHHHHHHHHH
T ss_pred HHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccC--CCCCeEEeCCC--CCccHHHHHHHHHH
Confidence 33333332 2233444 6788999999999999999999875431 02589999998 89999999999999
Q ss_pred hhcccCC
Q psy7539 304 IARNKVP 310 (318)
Q Consensus 304 ~~~~~~p 310 (318)
.+|.+.|
T Consensus 270 ~~g~~~~ 276 (330)
T 2c20_A 270 VTNHEIP 276 (330)
T ss_dssp HTTSCCC
T ss_pred HhCCCCc
Confidence 9976544
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-29 Score=223.30 Aligned_cols=231 Identities=13% Similarity=0.112 Sum_probs=181.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|...... .....+++++.+|+.++ + +..++
T Consensus 14 ~~l~~~L~~~--g~~V~~~~r~~~~~~-----------------------~~~~~~~~~~~~Dl~d~------~-~~~~~ 61 (312)
T 3ko8_A 14 SHLVDKLVEL--GYEVVVVDNLSSGRR-----------------------EFVNPSAELHVRDLKDY------S-WGAGI 61 (312)
T ss_dssp HHHHHHHHHT--TCEEEEECCCSSCCG-----------------------GGSCTTSEEECCCTTST------T-TTTTC
T ss_pred HHHHHHHHhC--CCEEEEEeCCCCCch-----------------------hhcCCCceEEECccccH------H-HHhhc
Confidence 4789999998 999999999754331 12245789999999987 3 55556
Q ss_pred cCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~ 155 (318)
++ |+|||+||.... ...+...+++|+.|+.+++++|++. ++++|||+||.++|+... +++|+.+..|.
T Consensus 62 ~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~----- 134 (312)
T 3ko8_A 62 KG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDADVIPTPEEEPYKPI----- 134 (312)
T ss_dssp CC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-----
T ss_pred CC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCC-----
Confidence 66 999999996432 2345678999999999999999985 889999999999987643 67776655554
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLI 234 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~ 234 (318)
+.|+.||+++|++++.+.. .|++++++||+++||+...+ .....++.
T Consensus 135 ------------------------~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--------~~~~~~~~ 182 (312)
T 3ko8_A 135 ------------------------SVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--------GVIYDFIM 182 (312)
T ss_dssp ------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--------SHHHHHHH
T ss_pred ------------------------ChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--------ChHHHHHH
Confidence 8999999999999999887 79999999999999975431 12235666
Q ss_pred HHhcC-ceeeEecCCCcccCcchHHHHHHHHHHHhhh---ccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 235 GAGKG-IIRTMYCDYSTCADFLPVDVLVNGVLLSTWN---FLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 235 ~~~~~-~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~---~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
.+..+ ......+++.+.++|+|++|+|++++.++.+ ... .+++||++++ .++++.|+++.+.+.+|.+
T Consensus 183 ~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~----~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 254 (312)
T 3ko8_A 183 KLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDA----PFLALNVGNV--DAVRVLDIAQIVAEVLGLR 254 (312)
T ss_dssp HHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCC----SEEEEEESCS--SCEEHHHHHHHHHHHHTCC
T ss_pred HHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCC----CCcEEEEcCC--CceeHHHHHHHHHHHhCCC
Confidence 66665 3345678889999999999999999999988 222 3789999999 8999999999999999654
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=228.01 Aligned_cols=247 Identities=15% Similarity=0.042 Sum_probs=187.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH-
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML- 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~- 79 (318)
++|+++|++++.|++|+++.|..+......+..+.+.. . . .....+++++.+|++++ +.+..+
T Consensus 24 ~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~---~--~~~~~~~~~~~~Dl~d~------~~~~~~~ 87 (362)
T 3sxp_A 24 SNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGH-----F---K--NLIGFKGEVIAADINNP------LDLRRLE 87 (362)
T ss_dssp HHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCC-----G---G--GGTTCCSEEEECCTTCH------HHHHHHT
T ss_pred HHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhh-----h---h--hccccCceEEECCCCCH------HHHHHhh
Confidence 47899999921299999999975522111100000000 0 0 11234679999999987 678888
Q ss_pred hcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc-ccccccCCCCCChhHHHH
Q psy7539 80 SETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~-~~~E~~~~~p~~~~~~~~ 157 (318)
..++|+|||+||.... ...+...+++|+.|+.+++++|++. +++ |||+||.++|+... +++|+.+..|.
T Consensus 88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~------- 158 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAGVYGNTKAPNVVGKNESPE------- 158 (362)
T ss_dssp TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGGGGCSCCSSBCTTSCCCCS-------
T ss_pred ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHHHhCCCCCCCCCCCCCCCC-------
Confidence 7799999999997653 3556789999999999999999985 776 99999998887644 77777655554
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHh
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAG 237 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~ 237 (318)
+.|+.||+++|+++..+.. .++++++||+++||+...+...+ ......++....
T Consensus 159 ----------------------~~Y~~sK~~~E~~~~~~~~-~~~~~~lR~~~v~Gp~~~~~~~~---~~~~~~~~~~~~ 212 (362)
T 3sxp_A 159 ----------------------NVYGFSKLCMDEFVLSHSN-DNVQVGLRYFNVYGPREFYKEKT---ASMVLQLALGAM 212 (362)
T ss_dssp ----------------------SHHHHHHHHHHHHHHHTTT-TSCEEEEEECSEESTTCGGGGGG---SCHHHHHHHHHH
T ss_pred ----------------------ChhHHHHHHHHHHHHHHhc-cCCEEEEEeCceeCcCCCCCCcc---hhHHHHHHHHHH
Confidence 8999999999999999977 48999999999999764322100 012345667777
Q ss_pred cCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 238 KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
.+....+++++.+.++|+|++|+|++++.++..+.. + +||++++ .++++.|+++.+.+.+|
T Consensus 213 ~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~~-----g-~~~i~~~--~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 213 AFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKS-----G-VYNVGYS--QARSYNEIVSILKEHLG 273 (362)
T ss_dssp TTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSSC-----E-EEEESCS--CEEEHHHHHHHHHHHHC
T ss_pred hCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCCC-----C-EEEeCCC--CCccHHHHHHHHHHHcC
Confidence 777666778889999999999999999999987643 5 9999999 89999999999999996
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-28 Score=225.61 Aligned_cols=238 Identities=18% Similarity=0.162 Sum_probs=186.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+.+... .....+++++.+|++++ +.+..++
T Consensus 43 ~~l~~~L~~~--g~~V~~~~r~~~~~~-----------------------~~~~~~v~~~~~Dl~d~------~~~~~~~ 91 (379)
T 2c5a_A 43 SHIARRLKHE--GHYVIASDWKKNEHM-----------------------TEDMFCDEFHLVDLRVM------ENCLKVT 91 (379)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCCSSS-----------------------CGGGTCSEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCeEEEEECCCccch-----------------------hhccCCceEEECCCCCH------HHHHHHh
Confidence 3789999998 899999999754321 11124788999999976 6788889
Q ss_pred cCccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc-------cccccc--CC
Q psy7539 81 ETIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-------VLEEKT--YP 147 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~-------~~~E~~--~~ 147 (318)
+++|+|||+||.... .......+++|+.|+.+++++|.+. ++++|||+||.++++... +++|+. ..
T Consensus 92 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~ 170 (379)
T 2c5a_A 92 EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDAWPA 170 (379)
T ss_dssp TTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB
T ss_pred CCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehheeCCCCCCCccCCCcCcccCCCC
Confidence 999999999997643 3456688999999999999999985 889999999988877421 345543 22
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
.|. +.|+.+|+++|+++..+.+ .+++++++||+.+||+...+..++ .
T Consensus 171 ~~~-----------------------------~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~---~ 218 (379)
T 2c5a_A 171 EPQ-----------------------------DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGR---E 218 (379)
T ss_dssp CCS-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSC---C
T ss_pred CCC-----------------------------ChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCccccc---c
Confidence 222 8999999999999998876 799999999999999765432111 0
Q ss_pred CchHHHHHHHhcCce-eeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 227 NGPTGLLIGAGKGII-RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
.....++..+..+.. ..+++++.+.++|+|++|+|++++.++.++ . +++||++++ .++++.|+++.+.+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~-----~~~~ni~~~--~~~s~~e~~~~i~~~~ 290 (379)
T 2c5a_A 219 KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-F-----REPVNIGSD--EMVSMNEMAEMVLSFE 290 (379)
T ss_dssp CHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-C-----CSCEEECCC--CCEEHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc-C-----CCeEEeCCC--CccCHHHHHHHHHHHh
Confidence 123446666666643 456788889999999999999999999865 2 679999998 8999999999999999
Q ss_pred cccCC
Q psy7539 306 RNKVP 310 (318)
Q Consensus 306 ~~~~p 310 (318)
|.+.+
T Consensus 291 g~~~~ 295 (379)
T 2c5a_A 291 EKKLP 295 (379)
T ss_dssp TCCCC
T ss_pred CCCCc
Confidence 76543
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-29 Score=226.72 Aligned_cols=233 Identities=17% Similarity=0.149 Sum_probs=187.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|..+. .+++++.+|++++ +.+..++
T Consensus 33 ~~l~~~L~~~--G~~V~~~~r~~~~-----------------------------~~~~~~~~Dl~d~------~~~~~~~ 75 (347)
T 4id9_A 33 RAVVAALRTQ--GRTVRGFDLRPSG-----------------------------TGGEEVVGSLEDG------QALSDAI 75 (347)
T ss_dssp HHHHHHHHHT--TCCEEEEESSCCS-----------------------------SCCSEEESCTTCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCEEEEEeCCCCC-----------------------------CCccEEecCcCCH------HHHHHHH
Confidence 3789999998 8999999996432 3678899999986 6888999
Q ss_pred cCccEEEEcccccCcch-hHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccC--C--cccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRFDD-YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK--E--KVLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~-~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~--~--~~~~E~~~~~p~~~~~~ 155 (318)
+++|+|||+||...... .....+++|+.|+.+++++|.+. ++++|||+||.++|+. . .+++|..+..|.
T Consensus 76 ~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~----- 149 (347)
T 4id9_A 76 MGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGEVYPENRPEFLPVTEDHPLCPN----- 149 (347)
T ss_dssp TTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCC-----
T ss_pred hCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCC-----
Confidence 99999999999875443 34689999999999999999995 8999999999999876 2 267776655554
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCC-ch----
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNIN-GP---- 229 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~-~~---- 229 (318)
+.|+.+|+++|+++..+.+ .+++++++||+++||....... .+++ |+
T Consensus 150 ------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~---~~~~~Gp~~~~ 202 (347)
T 4id9_A 150 ------------------------SPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDE---DSFFSGPRFFL 202 (347)
T ss_dssp ------------------------SHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCT---TSSSHHHHHBH
T ss_pred ------------------------ChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeeccccccc---ccccCCCCccc
Confidence 8999999999999999887 7999999999999932211100 0000 11
Q ss_pred ---------------HHHHHHHhcCceeeEecCCCcccCc----chHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCC
Q psy7539 230 ---------------TGLLIGAGKGIIRTMYCDYSTCADF----LPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF 290 (318)
Q Consensus 230 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~----v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~ 290 (318)
..++.....+....+++++.+.++| +|++|+|++++.++.++.. .+++||++++ .
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~----~~~~~ni~~~--~ 276 (347)
T 4id9_A 203 RPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEA----AGGTFNLGAD--E 276 (347)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGG----TTEEEEESCS--S
T ss_pred ccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCccc----CCCeEEECCC--C
Confidence 2345556666655677889999999 9999999999999998754 2789999999 8
Q ss_pred ceeHHHHHHHHHHhhcccC
Q psy7539 291 QITWYDIIENGKDIARNKV 309 (318)
Q Consensus 291 ~~~~~el~~~i~~~~~~~~ 309 (318)
++++.|+++.+.+.+|.+.
T Consensus 277 ~~s~~e~~~~i~~~~g~~~ 295 (347)
T 4id9_A 277 PADFAALLPKIAALTGLPI 295 (347)
T ss_dssp CEEHHHHHHHHHHHHCCCE
T ss_pred cccHHHHHHHHHHHhCCCC
Confidence 9999999999999997653
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-28 Score=221.62 Aligned_cols=242 Identities=15% Similarity=0.108 Sum_probs=187.4
Q ss_pred ChhHHHHHhh-CCC---cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHH
Q psy7539 1 KVLLEKILRT-CEN---VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDR 76 (318)
Q Consensus 1 ~~l~~~Ll~~-~~~---~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~ 76 (318)
++|+++|+++ .+| ++|+++.|....... +.+.. .....+++++.+|++++ +.+
T Consensus 14 ~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~-~~~~~----------------~~~~~~~~~~~~Dl~d~------~~~ 70 (337)
T 1r6d_A 14 SHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLAP----------------VDADPRLRFVHGDIRDA------GLL 70 (337)
T ss_dssp HHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGGG----------------GTTCTTEEEEECCTTCH------HHH
T ss_pred HHHHHHHHhhhcCCCCceEEEEEECCCccCch-hhhhh----------------cccCCCeEEEEcCCCCH------HHH
Confidence 3788999884 446 899999996432111 00100 00124789999999986 678
Q ss_pred HHHhcCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC--cccccccCCCCCC
Q psy7539 77 QMLSETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLEEKTYPPPVS 151 (318)
Q Consensus 77 ~~~~~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~--~~~~E~~~~~p~~ 151 (318)
..++.++|+|||+||..... ..+..++++|+.|+.+++++|.+. ++++|||+||.++|+.. .+++|+.+..|.
T Consensus 71 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~- 148 (337)
T 1r6d_A 71 ARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDSGSWTESSPLEPN- 148 (337)
T ss_dssp HHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC-
T ss_pred HHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHhCCCCCCCCCCCCCCCCC-
Confidence 88889999999999976532 234578999999999999999995 88999999999888753 256676544443
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPT 230 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~ 230 (318)
+.|+.||+++|+++..+.+ .+++++++||+.+||+...+. . -..
T Consensus 149 ----------------------------~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-----~--~~~ 193 (337)
T 1r6d_A 149 ----------------------------SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-----K--LIP 193 (337)
T ss_dssp ----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-----S--HHH
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-----C--hHH
Confidence 8999999999999998876 799999999999999754321 1 123
Q ss_pred HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 231 GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
.++..+..+....+++++.+.++|+|++|+|++++.++.+... +++||++++ .++++.|+++.+.+.+|.+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~-----g~~~~v~~~--~~~s~~e~~~~i~~~~g~~~ 265 (337)
T 1r6d_A 194 LFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA-----GEIYHIGGG--LELTNRELTGILLDSLGADW 265 (337)
T ss_dssp HHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT-----TCEEEECCC--CEEEHHHHHHHHHHHHTCCG
T ss_pred HHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCCC-----CCEEEeCCC--CCccHHHHHHHHHHHhCCCc
Confidence 4566666666556678889999999999999999999987543 789999999 89999999999999986653
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-29 Score=220.84 Aligned_cols=230 Identities=16% Similarity=0.154 Sum_probs=182.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ | .++++.|...... .....+++++.+|+++. .+..++
T Consensus 15 ~~l~~~L~~~--g-~~v~~~~~~~~~~-----------------------~~~~~~~~~~~~Dl~~~-------~~~~~~ 61 (313)
T 3ehe_A 15 SHVVDKLSES--N-EIVVIDNLSSGNE-----------------------EFVNEAARLVKADLAAD-------DIKDYL 61 (313)
T ss_dssp HHHHHHHTTT--S-CEEEECCCSSCCG-----------------------GGSCTTEEEECCCTTTS-------CCHHHH
T ss_pred HHHHHHHHhC--C-CEEEEEcCCCCCh-----------------------hhcCCCcEEEECcCChH-------HHHHHh
Confidence 3789999988 7 5666666433221 22245789999999873 467788
Q ss_pred cCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~ 155 (318)
+++|+|||+|+.... ...+...+++|+.|+.+++++|++. ++++|||+||.++|+... +.+|+.+..|.
T Consensus 62 ~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~----- 135 (313)
T 3ehe_A 62 KGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEAKVIPTPEDYPTHPI----- 135 (313)
T ss_dssp TTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSCSSSSBCTTSCCCCC-----
T ss_pred cCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcCCCCCCCCCCCCCCC-----
Confidence 899999999996432 2456789999999999999999985 889999999999987643 66776555544
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLI 234 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~ 234 (318)
+.|+.||.++|.++..+.. .|++++++||+++||+...+ .....++.
T Consensus 136 ------------------------~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--------~~~~~~~~ 183 (313)
T 3ehe_A 136 ------------------------SLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--------GVIYDFIM 183 (313)
T ss_dssp ------------------------SHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--------SHHHHHHH
T ss_pred ------------------------CHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--------ChHHHHHH
Confidence 8999999999999999887 79999999999999965431 12234666
Q ss_pred HHhcC-ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 235 GAGKG-IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 235 ~~~~~-~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
.+..+ ....+++++.+.++|+|++|+|++++.++.... .+++||++++ .++++.|+++.+.+.+|.+
T Consensus 184 ~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~-----~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 251 (313)
T 3ehe_A 184 KLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDE-----RVNIFNIGSE--DQIKVKRIAEIVCEELGLS 251 (313)
T ss_dssp HHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCS-----SEEEEECCCS--CCEEHHHHHHHHHHHTTCC
T ss_pred HHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCC-----CCceEEECCC--CCeeHHHHHHHHHHHhCCC
Confidence 66665 334567889999999999999999999998433 3789999999 8999999999999999754
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-28 Score=219.99 Aligned_cols=250 Identities=16% Similarity=0.137 Sum_probs=184.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCC-------CCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKN-------KNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISA 73 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~-------~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~ 73 (318)
++|+++|+++ |++|+++.|.... ....+++.. ....+++++.+|++++
T Consensus 16 ~~l~~~L~~~--g~~V~~~~r~~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~~D~~~~------ 70 (348)
T 1ek6_A 16 SHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQE-----------------LTGRSVEFEEMDILDQ------ 70 (348)
T ss_dssp HHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHH-----------------HHTCCCEEEECCTTCH------
T ss_pred HHHHHHHHHC--CCEEEEEecCCcccccccccHHHHHHHHh-----------------ccCCceEEEECCCCCH------
Confidence 3789999998 8999999986433 111222211 1124789999999986
Q ss_pred HHHHHHhc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC--cccccccC
Q psy7539 74 EDRQMLSE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLEEKTY 146 (318)
Q Consensus 74 ~~~~~~~~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~--~~~~E~~~ 146 (318)
+.+..+++ ++|+|||+||..... ..+...+++|+.|+.+++++|++. ++++|||+||.++++.. .+++|+.+
T Consensus 71 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~E~~~ 149 (348)
T 1ek6_A 71 GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNPQYLPLDEAHP 149 (348)
T ss_dssp HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCCCCCcCCCCC
Confidence 67888887 899999999976432 345578999999999999999985 88999999999888753 26677654
Q ss_pred CCC-CChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhc--CCcEEEecccccccccCCCCCCcc
Q psy7539 147 PPP-VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA--GMPCMILRPSIIIPIWKDPLPGWT 223 (318)
Q Consensus 147 ~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~g~~ 223 (318)
..| . +.|+.||+++|+++..+... +++++++||+++||+...+..|..
T Consensus 150 ~~p~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~ 200 (348)
T 1ek6_A 150 TGGCT-----------------------------NPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGED 200 (348)
T ss_dssp CCCCS-----------------------------SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCC
T ss_pred CCCCC-----------------------------CchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcC
Confidence 444 2 89999999999999988652 499999999999998643332211
Q ss_pred cC--CCchHHHHHHHh--cCceeeEec------CCCcccCcchHHHHHHHHHHHhhhccCCCCCCC-cEEEeeCCCCCce
Q psy7539 224 DN--INGPTGLLIGAG--KGIIRTMYC------DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTM-RVINLTANKDFQI 292 (318)
Q Consensus 224 ~~--~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~-~~~ni~~~~~~~~ 292 (318)
.. .......+.... .+....+++ ++.+.++|+|++|+|++++.++.+.... .+ ++||++++ .++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~---~g~~~~ni~~~--~~~ 275 (348)
T 1ek6_A 201 PQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQ---CGCRIYNLGTG--TGY 275 (348)
T ss_dssp CSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTT---CCEEEEEECCS--CCE
T ss_pred cccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhccccc---CCceEEEeCCC--CCc
Confidence 11 011222333333 343334444 6788999999999999999999876311 13 79999998 899
Q ss_pred eHHHHHHHHHHhhcccCC
Q psy7539 293 TWYDIIENGKDIARNKVP 310 (318)
Q Consensus 293 ~~~el~~~i~~~~~~~~p 310 (318)
++.|+++.+.+.+|.+.|
T Consensus 276 s~~e~~~~i~~~~g~~~~ 293 (348)
T 1ek6_A 276 SVLQMVQAMEKASGKKIP 293 (348)
T ss_dssp EHHHHHHHHHHHHCSCCC
T ss_pred cHHHHHHHHHHHhCCCCc
Confidence 999999999999976544
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-28 Score=221.38 Aligned_cols=241 Identities=17% Similarity=0.132 Sum_probs=186.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++.+|++|+++.|....... +.+. .....+++++.+|++++ +.+..++
T Consensus 18 ~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~-----------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 73 (348)
T 1oc2_A 18 SNFVHYVYNNHPDVHVTVLDKLTYAGNK-ANLE-----------------AILGDRVELVVGDIADA------ELVDKLA 73 (348)
T ss_dssp HHHHHHHHHHCTTCEEEEEECCCTTCCG-GGTG-----------------GGCSSSEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEeCCCCCCCh-hHHh-----------------hhccCCeEEEECCCCCH------HHHHHHh
Confidence 3789999988447899999996432111 0000 11125789999999986 6888999
Q ss_pred cCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC--------------ccccc
Q psy7539 81 ETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--------------KVLEE 143 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~--------------~~~~E 143 (318)
+++|+|||+||..... ..+...+++|+.|+.+++++|.+. ++ +|||+||.++|+.. .+++|
T Consensus 74 ~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E 151 (348)
T 1oc2_A 74 AKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTA 151 (348)
T ss_dssp TTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCT
T ss_pred hcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCCcccccccccccccCCCcCC
Confidence 9999999999986532 234578999999999999999986 66 99999999888653 34555
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCc
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
+.+..|. +.|+.||+++|+++..+.. .|++++++||+.+||+...+.
T Consensus 152 ~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~--- 199 (348)
T 1oc2_A 152 ETNYNPS-----------------------------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE--- 199 (348)
T ss_dssp TSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT---
T ss_pred CCCCCCC-----------------------------CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc---
Confidence 4433333 8999999999999999876 799999999999999754321
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHH
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGK 302 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~ 302 (318)
. -...++..+..+....+++++.+.++|+|++|+|++++.++..... +++||++++ .++++.|+++.+.
T Consensus 200 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-----g~~~~i~~~--~~~s~~e~~~~i~ 268 (348)
T 1oc2_A 200 --K--FIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM-----GETYLIGAD--GEKNNKEVLELIL 268 (348)
T ss_dssp --S--HHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCT-----TCEEEECCS--CEEEHHHHHHHHH
T ss_pred --c--hHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCCCC-----CCeEEeCCC--CCCCHHHHHHHHH
Confidence 1 1234566666666556678889999999999999999999976543 789999998 8999999999999
Q ss_pred HhhcccCC
Q psy7539 303 DIARNKVP 310 (318)
Q Consensus 303 ~~~~~~~p 310 (318)
+.+|.+.|
T Consensus 269 ~~~g~~~~ 276 (348)
T 1oc2_A 269 EKMGQPKD 276 (348)
T ss_dssp HHTTCCTT
T ss_pred HHhCCCcc
Confidence 99876543
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-28 Score=219.76 Aligned_cols=230 Identities=15% Similarity=0.073 Sum_probs=182.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+.... . -+++++.+|++++ +.+..++
T Consensus 26 ~~l~~~L~~~--G~~V~~~~r~~~~~------------------------~---l~~~~~~~Dl~d~------~~~~~~~ 70 (321)
T 2pk3_A 26 KYLANHLTEQ--NVEVFGTSRNNEAK------------------------L---PNVEMISLDIMDS------QRVKKVI 70 (321)
T ss_dssp HHHHHHHHHT--TCEEEEEESCTTCC------------------------C---TTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEecCCccc------------------------c---ceeeEEECCCCCH------HHHHHHH
Confidence 3789999998 89999999975421 1 1678899999976 6788887
Q ss_pred cC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC----cccccccCCCCCC
Q psy7539 81 ET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE----KVLEEKTYPPPVS 151 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~----~~~~E~~~~~p~~ 151 (318)
++ +|+|||+||..... ..+...+++|+.|+.+++++|.+..++++|||+||.++++.. .+++|+.+..|.
T Consensus 71 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~- 149 (321)
T 2pk3_A 71 SDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPM- 149 (321)
T ss_dssp HHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCC-
T ss_pred HhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCC-
Confidence 75 99999999986532 245679999999999999999875358999999999888753 266776554443
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPT 230 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~ 230 (318)
+.|+.||+++|+++..+.. .|++++++||+++||+..... ....
T Consensus 150 ----------------------------~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-------~~~~ 194 (321)
T 2pk3_A 150 ----------------------------SPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-------FVTQ 194 (321)
T ss_dssp ----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-------SHHH
T ss_pred ----------------------------CccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-------chHH
Confidence 8999999999999998876 799999999999999754321 0122
Q ss_pred HHHHHHhc---C--ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 231 GLLIGAGK---G--IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 231 ~~~~~~~~---~--~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
.++..+.. | ......+++.+.++|+|++|+|++++.++..+.. +++||++++ .++++.|+++.+.+.+
T Consensus 195 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~-----g~~~~i~~~--~~~s~~e~~~~i~~~~ 267 (321)
T 2pk3_A 195 DFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKT-----GDVYNVCSG--IGTRIQDVLDLLLAMA 267 (321)
T ss_dssp HHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCCT-----TCEEEESCS--CEEEHHHHHHHHHHHS
T ss_pred HHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCCC-----CCeEEeCCC--CCeeHHHHHHHHHHHh
Confidence 34444444 5 3445667888999999999999999999987643 789999998 8999999999999998
Q ss_pred ccc
Q psy7539 306 RNK 308 (318)
Q Consensus 306 ~~~ 308 (318)
|.+
T Consensus 268 g~~ 270 (321)
T 2pk3_A 268 NVK 270 (321)
T ss_dssp SSC
T ss_pred CCC
Confidence 654
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=219.05 Aligned_cols=244 Identities=19% Similarity=0.135 Sum_probs=184.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|++++.+++|+++.|....... +.+.+ .....+++++.+|++++ +.+..++
T Consensus 17 ~~l~~~L~~~g~~~~V~~~~r~~~~~~~-~~~~~----------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 73 (336)
T 2hun_A 17 SNFIRYILEKHPDWEVINIDKLGYGSNP-ANLKD----------------LEDDPRYTFVKGDVADY------ELVKELV 73 (336)
T ss_dssp HHHHHHHHHHCTTCEEEEEECCCTTCCG-GGGTT----------------TTTCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEecCcccCch-hHHhh----------------hccCCceEEEEcCCCCH------HHHHHHh
Confidence 4789999998224899999996432111 00100 00134789999999986 6788888
Q ss_pred cCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC--cccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~--~~~~E~~~~~p~~~~~~ 155 (318)
.++|+|||+||..... ..+..++++|+.|+.+++++|.+.+..++|||+||.++|+.. .+++|+.+..|.
T Consensus 74 ~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~----- 148 (336)
T 2hun_A 74 RKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPS----- 148 (336)
T ss_dssp HTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCC-----
T ss_pred hCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCC-----
Confidence 9999999999986432 234578999999999999999986223799999999888753 366776554444
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLI 234 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~ 234 (318)
+.|+.||.++|+++..+.. .+++++++||+++||+...+. . -...++.
T Consensus 149 ------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-----~--~~~~~~~ 197 (336)
T 2hun_A 149 ------------------------SPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-----K--LIPKTII 197 (336)
T ss_dssp ------------------------SHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-----S--HHHHHHH
T ss_pred ------------------------CccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-----c--hHHHHHH
Confidence 8999999999999999877 799999999999999754321 1 1234556
Q ss_pred HHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 235 GAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
.+..+....+++++.+.++|+|++|+|++++.++.+... +++||++++ .++++.|+++.+.+.+|.+.|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-----g~~~~v~~~--~~~s~~e~~~~i~~~~g~~~~ 266 (336)
T 2hun_A 198 RASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGES-----REIYNISAG--EEKTNLEVVKIILRLMGKGEE 266 (336)
T ss_dssp HHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCT-----TCEEEECCS--CEECHHHHHHHHHHHTTCCST
T ss_pred HHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCC-----CCEEEeCCC--CcccHHHHHHHHHHHhCCCcc
Confidence 666666556678888999999999999999999976543 789999998 889999999999999976544
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=225.22 Aligned_cols=245 Identities=16% Similarity=0.108 Sum_probs=181.6
Q ss_pred ChhHHHHHhhCCC-cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCEN-VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~-~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ | ++|++++|....... . .....+++++.+|++++ +.+..+
T Consensus 46 ~~l~~~L~~~--g~~~V~~~~r~~~~~~~--~-------------------l~~~~~v~~~~~Dl~d~------~~l~~~ 96 (377)
T 2q1s_A 46 SNLVKRLLEL--GVNQVHVVDNLLSAEKI--N-------------------VPDHPAVRFSETSITDD------ALLASL 96 (377)
T ss_dssp HHHHHHHHHT--TCSEEEEECCCTTCCGG--G-------------------SCCCTTEEEECSCTTCH------HHHHHC
T ss_pred HHHHHHHHHc--CCceEEEEECCCCCchh--h-------------------ccCCCceEEEECCCCCH------HHHHHH
Confidence 3789999998 8 899999997543210 0 00135789999999986 678888
Q ss_pred hcCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccc--ccc---CC-C
Q psy7539 80 SETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLE--EKT---YP-P 148 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~--E~~---~~-~ 148 (318)
++++|+|||+||..... ..+..++++|+.++.+|+++|.+.+++++|||+||.++|+... +++ |+. +. .
T Consensus 97 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~ 176 (377)
T 2q1s_A 97 QDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHN 176 (377)
T ss_dssp CSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSC
T ss_pred hhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccC
Confidence 89999999999986543 3456789999999999999999832689999999998887533 455 654 22 2
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCC-cccC-
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPG-WTDN- 225 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g-~~~~- 225 (318)
|. +.|+.+|+++|+++..+.+ .+++++++||+.+||+...+..| |...
T Consensus 177 ~~-----------------------------~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~ 227 (377)
T 2q1s_A 177 ND-----------------------------SPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTP 227 (377)
T ss_dssp CC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSG
T ss_pred CC-----------------------------CchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCc
Confidence 32 8999999999999999876 79999999999999976522111 2111
Q ss_pred ----CCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHH-HHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHH
Q psy7539 226 ----INGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNG-VLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 300 (318)
Q Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~-~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~ 300 (318)
......++..+..+....+++++++.++|+|++|+|++ ++.++.++.. + +||++++ .++++.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~~-----g-~~~i~~~--~~~s~~e~~~~ 299 (377)
T 2q1s_A 228 ATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTPG-----G-VYNIASG--KETSIADLATK 299 (377)
T ss_dssp GGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCTT-----E-EEECCCC--CCEEHHHHHHH
T ss_pred ccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCCC-----C-eEEecCC--CceeHHHHHHH
Confidence 01123466666677655567788899999999999999 9999887542 6 9999998 89999999999
Q ss_pred HHHhhcccCCC
Q psy7539 301 GKDIARNKVPL 311 (318)
Q Consensus 301 i~~~~~~~~p~ 311 (318)
+.+.+|.+.+.
T Consensus 300 i~~~~g~~~~~ 310 (377)
T 2q1s_A 300 INEITGNNTEL 310 (377)
T ss_dssp HHHHHTCCSCC
T ss_pred HHHHhCCCCCc
Confidence 99999765443
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-28 Score=223.23 Aligned_cols=259 Identities=16% Similarity=0.124 Sum_probs=184.7
Q ss_pred ChhHHHHH-hhCCCcEEEEEEccCCCC------CHHHHHHHHHcChhhHHHhhhcCcchh--ccc---eEEEeccCCCCC
Q psy7539 1 KVLLEKIL-RTCENVKIYILLRPKKNK------NSRERLEEIFQSPLYEALKKEQSESAI--FEK---VIPINGDVAVPD 68 (318)
Q Consensus 1 ~~l~~~Ll-~~~~~~~V~~l~R~~~~~------~~~~rl~~~~~~~~~~~~~~~~~~~~~--~~~---i~~~~gDl~~~~ 68 (318)
++|+++|+ ++ |++|+++.|..... ...+.+...++ .+ ... ..+ ++++.+|++++
T Consensus 16 ~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~~~~~~Dl~d~- 81 (397)
T 1gy8_A 16 SHFVRALLRDT--NHSVVIVDSLVGTHGKSDHVETRENVARKLQ-----QS------DGPKPPWADRYAALEVGDVRNE- 81 (397)
T ss_dssp HHHHHHHHHHC--CCEEEEEECCTTTTTCCTTSCCHHHHHHHHH-----HS------CSSCCTTTTCCCEEEESCTTCH-
T ss_pred HHHHHHHHHhC--CCEEEEEecCCcccccccccchHHHHHHHHH-----Hh------hccccccCCceEEEEECCCCCH-
Confidence 37899999 77 89999999975431 00222322111 00 000 124 89999999986
Q ss_pred CCCCHHHHHHHhc--C-ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC----
Q psy7539 69 LGISAEDRQMLSE--T-IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE---- 138 (318)
Q Consensus 69 ~gl~~~~~~~~~~--~-~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~---- 138 (318)
+.+..+++ + +|+|||+||..... ..+..++++|+.|+.+++++|.+. ++++|||+||.++++..
T Consensus 82 -----~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~SS~~v~g~~~~~~ 155 (397)
T 1gy8_A 82 -----DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIFGNPTMGS 155 (397)
T ss_dssp -----HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGTBSCCC--
T ss_pred -----HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEECCHHHhCCCCccc
Confidence 57888777 6 99999999986542 345678999999999999999985 88999999998887642
Q ss_pred -----cccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccc
Q psy7539 139 -----KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIII 212 (318)
Q Consensus 139 -----~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~ 212 (318)
.+++|+.+..|. +.|+.||+++|+++..+.. .+++++++||+++|
T Consensus 156 ~~~~~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~ 206 (397)
T 1gy8_A 156 VSTNAEPIDINAKKSPE-----------------------------SPYGESKLIAERMIRDCAEAYGIKGICLRYFNAC 206 (397)
T ss_dssp ---CCCCBCTTSCCBCS-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred ccccccCcCccCCCCCC-----------------------------CchHHHHHHHHHHHHHHHHHHCCcEEEEecccee
Confidence 245565444333 8999999999999999877 69999999999999
Q ss_pred cccCCCCCCcccC-CCchHHHHH-----HHhcCce------------eeEec------CCCcccCcchHHHHHHHHHHHh
Q psy7539 213 PIWKDPLPGWTDN-INGPTGLLI-----GAGKGII------------RTMYC------DYSTCADFLPVDVLVNGVLLST 268 (318)
Q Consensus 213 G~~~~~~~g~~~~-~~~~~~~~~-----~~~~~~~------------~~~~~------~~~~~~~~v~v~Dva~~~~~~~ 268 (318)
|+...+..|+... .......+. .+..+.. ..+++ ++.+.++|+||+|+|++++.++
T Consensus 207 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l 286 (397)
T 1gy8_A 207 GAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILAL 286 (397)
T ss_dssp CCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHH
T ss_pred CCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHH
Confidence 9875443332211 112222222 4444432 33444 6788999999999999999999
Q ss_pred hhccCCCC-CCC---cEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 269 WNFLSNPG-NTM---RVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 269 ~~~~~~~~-~~~---~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
++.....+ ... ++||++++ .++++.|+++.+.+.+|.+.|
T Consensus 287 ~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~~ 330 (397)
T 1gy8_A 287 DYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHPIP 330 (397)
T ss_dssp HHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCCCC
T ss_pred hcccccccccccCCCcEEEeCCC--CcccHHHHHHHHHHHhCCCCC
Confidence 87543100 002 79999998 899999999999999976544
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-28 Score=218.61 Aligned_cols=252 Identities=14% Similarity=0.071 Sum_probs=185.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ +|++|++++|+...... .....+++++.+|++++. +.+..++
T Consensus 14 ~~l~~~L~~~-~g~~V~~~~r~~~~~~~----------------------~~~~~~~~~~~~D~~~~~-----~~~~~~~ 65 (345)
T 2bll_A 14 NHLTERLLRE-DHYEVYGLDIGSDAISR----------------------FLNHPHFHFVEGDISIHS-----EWIEYHV 65 (345)
T ss_dssp HHHHHHHHHS-TTCEEEEEESCCGGGGG----------------------GTTCTTEEEEECCTTTCS-----HHHHHHH
T ss_pred HHHHHHHHHh-CCCEEEEEeCCcchHHH----------------------hhcCCCeEEEeccccCcH-----HHHHhhc
Confidence 3788999986 57899999996432100 011247899999999753 4577788
Q ss_pred cCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~ 155 (318)
+++|+|||+||.... .......+++|+.++.+++++|.+. + ++|||+||.++++... +++|+....+..+.
T Consensus 66 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~-- 141 (345)
T 2bll_A 66 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV-- 141 (345)
T ss_dssp HHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCT--
T ss_pred cCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCCCCCCCcCCcccccccCcc--
Confidence 899999999997643 2345578999999999999999985 6 8999999998887633 56665432111000
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCC-chHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNIN-GPTGLL 233 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~-~~~~~~ 233 (318)
..+.+.|+.+|+++|+++..+.+ .+++++++||+.+||+...+...+..+.. ....++
T Consensus 142 --------------------~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~ 201 (345)
T 2bll_A 142 --------------------NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLI 201 (345)
T ss_dssp --------------------TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHH
T ss_pred --------------------cCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHH
Confidence 00016899999999999998876 79999999999999976543211110111 123466
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCC-ceeHHHHHHHHHHhhccc
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF-QITWYDIIENGKDIARNK 308 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~-~~~~~el~~~i~~~~~~~ 308 (318)
..+..+....+++++.+.++|+|++|+|++++.++.+.... ..+++||++++ . ++|+.|+++.+.+.+|.+
T Consensus 202 ~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~--~~g~~~~i~~~--~~~~s~~e~~~~i~~~~g~~ 273 (345)
T 2bll_A 202 LNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNR--CDGEIINIGNP--ENEASIEELGEMLLASFEKH 273 (345)
T ss_dssp HHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGT--TTTEEEEECCT--TSEEEHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhcccc--CCCceEEeCCC--CCCCCHHHHHHHHHHHhCCC
Confidence 66667766667788889999999999999999999876410 13789999998 6 799999999999998654
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=218.71 Aligned_cols=210 Identities=15% Similarity=0.123 Sum_probs=165.9
Q ss_pred ceEEEeccCCCCCCCCCHHHHHHHhcC--ccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEE
Q psy7539 56 KVIPINGDVAVPDLGISAEDRQMLSET--IHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYV 129 (318)
Q Consensus 56 ~i~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~ 129 (318)
.++++.+|++++ +.+..++++ +|+|||+||.... ...+...+++|+.|+.+|+++|++. ++++|||+
T Consensus 39 ~~~~~~~D~~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~ 111 (319)
T 4b8w_A 39 FVSSKDADLTDT------AQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSC 111 (319)
T ss_dssp ECCTTTCCTTSH------HHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEE
T ss_pred ccCceecccCCH------HHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence 455668999876 678888875 9999999998642 2345678999999999999999996 89999999
Q ss_pred eccccccCCc--cccccc----CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCC-chhHHHHHHHHHHHHhhh-cCC
Q psy7539 130 STAYCHPKEK--VLEEKT----YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPN-GYAYTKCLCEGVVTEYME-AGM 201 (318)
Q Consensus 130 SS~~~~~~~~--~~~E~~----~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~-~~~ 201 (318)
||.++|+... +++|+. .+.|. + +|+.+|+++|++++.+.+ .++
T Consensus 112 SS~~vyg~~~~~~~~E~~~~~~~~~p~-----------------------------~~~Y~~sK~~~E~~~~~~~~~~~~ 162 (319)
T 4b8w_A 112 LSTCIFPDKTTYPIDETMIHNGPPHNS-----------------------------NFGYSYAKRMIDVQNRAYFQQYGC 162 (319)
T ss_dssp CCGGGSCSSCCSSBCGGGGGBSCCCSS-----------------------------SHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cchhhcCCCCCCCccccccccCCCCCC-----------------------------cchHHHHHHHHHHHHHHHHHhhCC
Confidence 9999987643 677764 22221 4 699999999999999887 799
Q ss_pred cEEEecccccccccCCCCCCcccCCCchHHHHHH----HhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCC
Q psy7539 202 PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIG----AGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGN 277 (318)
Q Consensus 202 ~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~ 277 (318)
+++++||+++||+...+... .-.....++.. ...+....+++++.+.++|+|++|+|++++.++.+....
T Consensus 163 ~~~ilRp~~v~Gp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~--- 236 (319)
T 4b8w_A 163 TFTAVIPTNVFGPHDNFNIE---DGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEV--- 236 (319)
T ss_dssp EEEEEEECEEECTTCCCCTT---TSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCS---
T ss_pred CEEEEeeccccCCCCCCCCc---cccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccC---
Confidence 99999999999976543211 00112234444 566766677889999999999999999999999885431
Q ss_pred CCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 278 TMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 278 ~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
.+++||++++ .++++.|+++.+.+.+|.+.
T Consensus 237 ~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 266 (319)
T 4b8w_A 237 EPIILSVGEE--DEVSIKEAAEAVVEAMDFHG 266 (319)
T ss_dssp SCEEECCCGG--GCEEHHHHHHHHHHHTTCCS
T ss_pred CceEEEecCC--CceeHHHHHHHHHHHhCCCC
Confidence 3679999998 89999999999999997553
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-28 Score=218.15 Aligned_cols=243 Identities=16% Similarity=0.156 Sum_probs=185.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|++. .+++|+++.|....... +.+.+ .....+++++.+|++++ +.+..++
T Consensus 14 ~~l~~~L~~~-~g~~V~~~~r~~~~~~~-~~~~~----------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 69 (361)
T 1kew_A 14 SAVVRHIIKN-TQDTVVNIDKLTYAGNL-ESLSD----------------ISESNRYNFEHADICDS------AEITRIF 69 (361)
T ss_dssp HHHHHHHHHH-CSCEEEEEECCCTTCCG-GGGTT----------------TTTCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHhc-CCCeEEEEecCCCCCch-hhhhh----------------hhcCCCeEEEECCCCCH------HHHHHHH
Confidence 3789999987 56899999996422111 00100 00124789999999986 6788888
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhc-CCCc-------cEEEEeccccccCCc--------
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQM-IHLQ-------LFVYVSTAYCHPKEK-------- 139 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~-------~~v~~SS~~~~~~~~-------- 139 (318)
+ ++|+|||+||..... ..+..++++|+.|+.+++++|.+. .+++ +|||+||.++++...
T Consensus 70 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 149 (361)
T 1kew_A 70 EQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS 149 (361)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred hhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence 7 899999999986532 234578999999999999999973 1566 999999998887532
Q ss_pred ----ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccc
Q psy7539 140 ----VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPI 214 (318)
Q Consensus 140 ----~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~ 214 (318)
+++|+.+..|. +.|+.||+++|+++..+.. .+++++++||+.+||+
T Consensus 150 ~~~~~~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~ 200 (361)
T 1kew_A 150 VTLPLFTETTAYAPS-----------------------------SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGP 200 (361)
T ss_dssp SCCCCBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEEST
T ss_pred ccCCCCCCCCCCCCC-----------------------------CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECC
Confidence 45555443333 8999999999999999877 7999999999999997
Q ss_pred cCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeH
Q psy7539 215 WKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITW 294 (318)
Q Consensus 215 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~ 294 (318)
...+. .....++..+..+....+++++.+.++|+|++|+|++++.++..... +++||++++ .++++
T Consensus 201 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~-----g~~~~v~~~--~~~s~ 266 (361)
T 1kew_A 201 YHFPE-------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKA-----GETYNIGGH--NEKKN 266 (361)
T ss_dssp TCCTT-------SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT-----TCEEEECCC--CEEEH
T ss_pred CCCcc-------cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCCCC-----CCEEEecCC--CeeeH
Confidence 54321 11234556666665556678888999999999999999999987543 789999999 88999
Q ss_pred HHHHHHHHHhhcccCC
Q psy7539 295 YDIIENGKDIARNKVP 310 (318)
Q Consensus 295 ~el~~~i~~~~~~~~p 310 (318)
.|+++.+.+.+|.+.|
T Consensus 267 ~e~~~~i~~~~g~~~~ 282 (361)
T 1kew_A 267 LDVVFTICDLLDEIVP 282 (361)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhCCcCc
Confidence 9999999999876654
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=7e-28 Score=216.85 Aligned_cols=234 Identities=13% Similarity=0.110 Sum_probs=174.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+... .....+++++.+|++++ +.+..++
T Consensus 27 ~~l~~~L~~~--g~~V~~~~r~~~~~~-----------------------~l~~~~~~~~~~Dl~d~------~~~~~~~ 75 (342)
T 2x4g_A 27 HHAARAIRAA--GHDLVLIHRPSSQIQ-----------------------RLAYLEPECRVAEMLDH------AGLERAL 75 (342)
T ss_dssp HHHHHHHHHT--TCEEEEEECTTSCGG-----------------------GGGGGCCEEEECCTTCH------HHHHHHT
T ss_pred HHHHHHHHHC--CCEEEEEecChHhhh-----------------------hhccCCeEEEEecCCCH------HHHHHHH
Confidence 4789999998 899999999754321 11113788999999976 6888999
Q ss_pred cCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc---ccccccCCCCCChhHHH
Q psy7539 81 ETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK---VLEEKTYPPPVSPHNVI 156 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~---~~~E~~~~~p~~~~~~~ 156 (318)
+++|+|||+||.... ......++++|+.++.+++++|.+. ++++|||+||.++++... ..+|+.+..|...
T Consensus 76 ~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~---- 150 (342)
T 2x4g_A 76 RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPS---- 150 (342)
T ss_dssp TTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCT----
T ss_pred cCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcCCCCCCCCCCCCCCcccc----
Confidence 999999999997543 2345568999999999999999986 889999999998887532 2356554444100
Q ss_pred HHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 157 EKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
..+.|+.+|+++|+++..+.+.|++++++||+.+||+.... + + ...++..+
T Consensus 151 ---------------------~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~-~----~---~~~~~~~~ 201 (342)
T 2x4g_A 151 ---------------------GKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIG-P----T---TGRVITAI 201 (342)
T ss_dssp ---------------------TSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSS-C----S---TTHHHHHH
T ss_pred ---------------------ccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCcc-c----c---HHHHHHHH
Confidence 01899999999999999876448999999999999965410 0 1 23455556
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
..+....+ +++.++|+|++|+|++++.++.++.. +++||++++ . +++.|+++.+.+.+|.+.+
T Consensus 202 ~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-----g~~~~v~~~--~-~s~~e~~~~i~~~~g~~~~ 264 (342)
T 2x4g_A 202 GNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-----GERYLLTGH--N-LEMADLTRRIAELLGQPAP 264 (342)
T ss_dssp HTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-----TCEEEECCE--E-EEHHHHHHHHHHHHTCCCC
T ss_pred HcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-----CceEEEcCC--c-ccHHHHHHHHHHHhCCCCC
Confidence 66644333 67889999999999999999987653 689999999 7 9999999999999976544
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-28 Score=215.62 Aligned_cols=239 Identities=15% Similarity=0.046 Sum_probs=185.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+.... +++... ....+++++.+|++++ +.+..++
T Consensus 28 ~~l~~~L~~~--g~~V~~~~r~~~~~~~-~~~~~~----------------~~~~~~~~~~~Dl~d~------~~~~~~~ 82 (335)
T 1rpn_A 28 AYLAKLLLEK--GYRVHGLVARRSSDTR-WRLREL----------------GIEGDIQYEDGDMADA------CSVQRAV 82 (335)
T ss_dssp HHHHHHHHHT--TCEEEEEECCCSSCCC-HHHHHT----------------TCGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCeEEEEeCCCccccc-cchhhc----------------cccCceEEEECCCCCH------HHHHHHH
Confidence 3789999998 8999999997653211 111110 0124789999999876 6788887
Q ss_pred cC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCC-ccEEEEeccccccCCc--ccccccCCCCCCh
Q psy7539 81 ET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHL-QLFVYVSTAYCHPKEK--VLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~-~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~ 152 (318)
++ +|+|||+||..... ..+...+++|+.|+.+++++|.+. ++ ++|||+||.++++... +++|+.+..|.
T Consensus 83 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~-- 159 (335)
T 1rpn_A 83 IKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEMFGLIQAERQDENTPFYPR-- 159 (335)
T ss_dssp HHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC--
T ss_pred HHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHHHhCCCCCCCCCcccCCCCC--
Confidence 74 79999999976532 345678999999999999999986 65 8999999998887643 66776655554
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc--h
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING--P 229 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~--~ 229 (318)
+.|+.+|+++|+++..+.+ .+++++++||+.+||+.... +... .
T Consensus 160 ---------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~------~~~~~~~ 206 (335)
T 1rpn_A 160 ---------------------------SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGI------EFVTRKV 206 (335)
T ss_dssp ---------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT------TSHHHHH
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCC------CcchHHH
Confidence 8999999999999999877 69999999999999965321 1111 1
Q ss_pred HHHHHHHhcCcee-eEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 230 TGLLIGAGKGIIR-TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 230 ~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
..++..+..|... ...+++++.++|+|++|+|++++.++.++. .++||++++ .++++.|+++.+.+.+|.+
T Consensus 207 ~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~------~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 207 TDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK------ADDYVVATG--VTTTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp HHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS------CCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC------CCEEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 2345555566433 356788999999999999999999998753 479999998 8999999999999998654
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.96 E-value=8e-29 Score=217.80 Aligned_cols=218 Identities=17% Similarity=0.055 Sum_probs=173.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|+.+.. ..+++++.+|++++ +.+..++
T Consensus 16 ~~l~~~L~~~--g~~V~~~~r~~~~~---------------------------~~~~~~~~~Dl~d~------~~~~~~~ 60 (286)
T 3gpi_A 16 LELARRLTAQ--GHEVTGLRRSAQPM---------------------------PAGVQTLIADVTRP------DTLASIV 60 (286)
T ss_dssp HHHHHHHHHT--TCCEEEEECTTSCC---------------------------CTTCCEEECCTTCG------GGCTTGG
T ss_pred HHHHHHHHHC--CCEEEEEeCCcccc---------------------------ccCCceEEccCCCh------HHHHHhh
Confidence 4789999998 99999999975432 25788999999987 4677777
Q ss_pred cC-ccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHHHH
Q psy7539 81 ET-IHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 81 ~~-~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~~~ 157 (318)
++ +|+|||+||... .....++++|+.++.+++++|++. ++++|||+||.++|+... +++|+.+..|.
T Consensus 61 ~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~------- 130 (286)
T 3gpi_A 61 HLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK------- 130 (286)
T ss_dssp GGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGGGCCCCCSSEECTTSCCCCC-------
T ss_pred cCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccEEEcCCCCCCCCCCCCCCCC-------
Confidence 76 999999999743 334568889999999999999984 899999999999988643 67787666655
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHh
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAG 237 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~ 237 (318)
+.|+.+|+++|++ ..+ ++++++||+++||+... .++..+.
T Consensus 131 ----------------------~~Y~~sK~~~E~~-~~~----~~~~ilR~~~v~G~~~~-------------~~~~~~~ 170 (286)
T 3gpi_A 131 ----------------------DFSGKRMLEAEAL-LAA----YSSTILRFSGIYGPGRL-------------RMIRQAQ 170 (286)
T ss_dssp ----------------------SHHHHHHHHHHHH-GGG----SSEEEEEECEEEBTTBC-------------HHHHHTT
T ss_pred ----------------------ChhhHHHHHHHHH-Hhc----CCeEEEecccccCCCch-------------hHHHHHH
Confidence 8999999999999 554 89999999999995431 2344444
Q ss_pred cCceeeEecCCCcccCcchHHHHHHHHHHHhhhc--cCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCCCC
Q psy7539 238 KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF--LSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVPLN 312 (318)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~--~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p~~ 312 (318)
. . ..++++.+.++|+|++|+|++++.++.++ .. .+++||++++ .++++.|+++.+.+.+|.+.|..
T Consensus 171 ~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~----~~~~~~~~~~--~~~s~~e~~~~i~~~~g~~~~~~ 238 (286)
T 3gpi_A 171 T-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAV----PERLYIVTDN--QPLPVHDLLRWLADRQGIAYPAG 238 (286)
T ss_dssp C-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSC----CCSEEEECCS--CCEEHHHHHHHHHHHTTCCCCCS
T ss_pred h-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCC----CCceEEEeCC--CCCCHHHHHHHHHHHcCCCCCCC
Confidence 4 2 23467889999999999999999999985 22 3789999998 89999999999999997765554
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=212.28 Aligned_cols=235 Identities=19% Similarity=0.167 Sum_probs=182.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|...... .....+++++.+|++++ +.+..++
T Consensus 14 ~~l~~~L~~~--G~~V~~~~r~~~~~~-----------------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 62 (311)
T 2p5y_A 14 SHIVEDLLAR--GLEVAVLDNLATGKR-----------------------ENVPKGVPFFRVDLRDK------EGVERAF 62 (311)
T ss_dssp HHHHHHHHTT--TCEEEEECCCSSCCG-----------------------GGSCTTCCEECCCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCCcCch-----------------------hhcccCeEEEECCCCCH------HHHHHHH
Confidence 3789999988 999999988533220 11124678899999976 5788877
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecc-ccccC-C--cccccccCCCCCC
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA-YCHPK-E--KVLEEKTYPPPVS 151 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~-~~~~~-~--~~~~E~~~~~p~~ 151 (318)
+ ++|+|||+||..... ......+++|+.|+.+++++|.+. ++++|||+||. ++++. . .+.+|+.+..|.
T Consensus 63 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~- 140 (311)
T 2p5y_A 63 REFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIYGEVPEGERAEETWPPRPK- 140 (311)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC-
T ss_pred HhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC-
Confidence 7 899999999976432 334578999999999999999985 78999999998 77764 2 256666544443
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc-h
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING-P 229 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~-~ 229 (318)
+.|+.||+++|++++.+.+ .+++++++||+++||+..... ...+ .
T Consensus 141 ----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~-----~~~~~~ 187 (311)
T 2p5y_A 141 ----------------------------SPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPH-----GEAGVV 187 (311)
T ss_dssp ----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSS-----STTHHH
T ss_pred ----------------------------ChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCC-----CcCcHH
Confidence 8999999999999998876 799999999999999754321 0011 1
Q ss_pred HHHHHHHhcCceeeEe-----cCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHh
Q psy7539 230 TGLLIGAGKGIIRTMY-----CDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDI 304 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~~-----~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~ 304 (318)
..++.....+....++ +++.+.++|+|++|+|++++.++..+ +++||++++ .++|++|+++.+.+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-------~~~~~i~~~--~~~s~~e~~~~i~~~ 258 (311)
T 2p5y_A 188 AIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL-------EGIYNVGTG--EGHTTREVLMAVAEA 258 (311)
T ss_dssp HHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC-------CEEEEESCS--CCEEHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC-------CCEEEeCCC--CCccHHHHHHHHHHH
Confidence 2345555566555556 78889999999999999999998763 579999998 899999999999999
Q ss_pred hcccCC
Q psy7539 305 ARNKVP 310 (318)
Q Consensus 305 ~~~~~p 310 (318)
+|.+.|
T Consensus 259 ~g~~~~ 264 (311)
T 2p5y_A 259 AGKAPE 264 (311)
T ss_dssp HTCCCC
T ss_pred hCCCCC
Confidence 976543
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=232.03 Aligned_cols=253 Identities=17% Similarity=0.144 Sum_probs=180.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCC-CCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV-PDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~-~~~gl~~~~~~~~ 79 (318)
++|+++|++. +++|+|++|+.+.....+++.+.+...+...+. .....+++++.||+++ +.+ . +
T Consensus 164 ~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~-----~~~~~~v~~v~~Dl~d~~~l-------~-~ 228 (508)
T 4f6l_B 164 AYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETV-----EMMLSNIEVIVGDFECMDDV-------V-L 228 (508)
T ss_dssp HHHHHHTBTT--EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHH-----HHHSTTEEEEEEBTTBCSSC-------C-C
T ss_pred HHHHHHHHhc--CCEEEEEECCCChHHHHHHHHHHHHHhcccccc-----hhccCceEEEecCCcccccC-------C-C
Confidence 3788899766 889999999876555566666554322111111 2234689999999998 443 2 5
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccC-------CcccccccCCCCCCh
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK-------EKVLEEKTYPPPVSP 152 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~-------~~~~~E~~~~~p~~~ 152 (318)
..++|+|||+||.+.+..++..++++|+.|+.+++++|.+ +.++|||+||.++ +. ..+++|+....+..
T Consensus 229 ~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~- 304 (508)
T 4f6l_B 229 PENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQL- 304 (508)
T ss_dssp SSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBC-
T ss_pred ccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCccCCcCccccccccccccc-
Confidence 6799999999999877777788999999999999999997 6789999999888 33 12555654422211
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
+.+.|+.||+++|+++..+.+.|++++++||++|||+...+.............+
T Consensus 305 -------------------------~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~ 359 (508)
T 4f6l_B 305 -------------------------LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMV 359 (508)
T ss_dssp -------------------------CCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHH
T ss_pred -------------------------CCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHH
Confidence 1289999999999999998767999999999999998754321100000112345
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
+.....+... ..+++++.++|+||+|+|++++.++..+.. +++||++++ .++++.|+++.+++..
T Consensus 360 i~~~~~~~~~-~~~~g~~~~~~v~v~DvA~ai~~~~~~~~~-----~~~~nl~~~--~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 360 MNDLLQLDCI-GVSMAEMPVDFSFVDTTARQIVALAQVNTP-----QIIYHVLSP--NKMPVKSLLECVKRKE 424 (508)
T ss_dssp HHHHTTCSEE-ETTGGGSEEECEEHHHHHHHHHHHTTBCCS-----CSEEEESCS--CEEEHHHHHHHHHSSC
T ss_pred HHHHHHcCCC-CCCccCceEEEEcHHHHHHHHHHHHhCCCC-----CCEEEeCCC--CCCCHHHHHHHHHHcC
Confidence 5555554322 223468999999999999999999987653 789999999 8999999999998753
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-27 Score=214.99 Aligned_cols=244 Identities=14% Similarity=0.114 Sum_probs=180.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|..... ..+.+..+ . ...+++++.+|++++ +.+..++
T Consensus 15 ~~l~~~L~~~--g~~V~~~~r~~~~~-~~~~~~~l---------------~-~~~~~~~~~~Dl~d~------~~~~~~~ 69 (347)
T 1orr_A 15 SNLASFALSQ--GIDLIVFDNLSRKG-ATDNLHWL---------------S-SLGNFEFVHGDIRNK------NDVTRLI 69 (347)
T ss_dssp HHHHHHHHHT--TCEEEEEECCCSTT-HHHHHHHH---------------H-TTCCCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCEEEEEeCCCccC-chhhhhhh---------------c-cCCceEEEEcCCCCH------HHHHHHH
Confidence 4789999998 99999999853211 11112111 1 123688999999986 6788888
Q ss_pred cC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCc-cEEEEeccccccCCc--c------------
Q psy7539 81 ET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQ-LFVYVSTAYCHPKEK--V------------ 140 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~v~~SS~~~~~~~~--~------------ 140 (318)
++ +|+|||+||..... ..+...+++|+.|+.+++++|.+. +++ +|||+||.++++... +
T Consensus 70 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~ 148 (347)
T 1orr_A 70 TKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVD 148 (347)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETT
T ss_pred hccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHhCCCCcCCcccccccccccc
Confidence 87 99999999986532 345678999999999999999986 665 999999998887532 2
Q ss_pred ----cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEeccccccccc
Q psy7539 141 ----LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 141 ----~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~ 215 (318)
++|+.+..|. +.|+.||+++|++++.+.. .|++++++||+.+||+.
T Consensus 149 ~~~~~~e~~~~~~~-----------------------------~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~ 199 (347)
T 1orr_A 149 KPNGYDESTQLDFH-----------------------------SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGR 199 (347)
T ss_dssp CTTCBCTTSCCCCC-----------------------------HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred cccCccccCCCCCC-----------------------------CchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcC
Confidence 2232222222 7899999999999999877 69999999999999976
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCc-----eeeEecCCCcccCcchHHHHHHHHHHHhhh-ccCCCCCCCcEEEeeCCCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGI-----IRTMYCDYSTCADFLPVDVLVNGVLLSTWN-FLSNPGNTMRVINLTANKD 289 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~-~~~~~~~~~~~~ni~~~~~ 289 (318)
..+... . .....++.....+. ....++++.+.++|+|++|+|++++.++.+ ... .+++||++++
T Consensus 200 ~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~----~g~~~~v~~~-- 269 (347)
T 1orr_A 200 QFATYD---Q-GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKI----RGNAFNIGGT-- 269 (347)
T ss_dssp CCCBTT---B-CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHH----TTCEEEESSC--
T ss_pred CCCCCc---C-cHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccC----CCCEEEeCCC--
Confidence 432110 0 01123445555544 345678899999999999999999999975 222 2679999988
Q ss_pred C--ceeHHHHHHHHHHhhcccC
Q psy7539 290 F--QITWYDIIENGKDIARNKV 309 (318)
Q Consensus 290 ~--~~~~~el~~~i~~~~~~~~ 309 (318)
. ++++.|+++.+.+.+|.+.
T Consensus 270 ~~~~~s~~e~~~~i~~~~g~~~ 291 (347)
T 1orr_A 270 IVNSLSLLELFKLLEDYCNIDM 291 (347)
T ss_dssp GGGEEEHHHHHHHHHHHHTCCC
T ss_pred CCCCccHHHHHHHHHHHhCCCC
Confidence 5 4999999999999997654
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-28 Score=215.44 Aligned_cols=238 Identities=16% Similarity=0.051 Sum_probs=179.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++.++++|+++.|+.+... ...+++++.+|++++ +.+..++
T Consensus 16 ~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------------------~~~~~~~~~~D~~d~------~~~~~~~ 64 (312)
T 2yy7_A 16 TELTQKLRKLYGTENVIASDIRKLNTD-------------------------VVNSGPFEVVNALDF------NQIEHLV 64 (312)
T ss_dssp HHHHHHHHHHHCGGGEEEEESCCCSCH-------------------------HHHSSCEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEcCCCcccc-------------------------ccCCCceEEecCCCH------HHHHHHH
Confidence 378899987634679999999754321 012577899999976 6788888
Q ss_pred c--CccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc---ccccccCCCCCChh
Q psy7539 81 E--TIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK---VLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~---~~~E~~~~~p~~~~ 153 (318)
+ ++|+|||+||..... ..+...+++|+.|+.+++++|.+. ++++|||+||.++++... +.+|+.+..|.
T Consensus 65 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~--- 140 (312)
T 2yy7_A 65 EVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS--- 140 (312)
T ss_dssp HHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC---
T ss_pred hhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHHhCCCCCCCCccccCcCCCC---
Confidence 7 899999999975432 345678999999999999999985 889999999998887632 45565544443
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
+.|+.+|+++|+++..+.+ .|++++++||+.+||+...+..+ ........
T Consensus 141 --------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~---~~~~~~~~ 191 (312)
T 2yy7_A 141 --------------------------TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGG---TTDYAVDI 191 (312)
T ss_dssp --------------------------SHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSC---TTTHHHHH
T ss_pred --------------------------chhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCc---hhhhHHHH
Confidence 8999999999999998876 79999999999999976443211 00112233
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
+.....+.....++++++.++|+|++|+|++++.+++++.... ..+++||+++. ++++.|+++.+.+.+|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~-~~~~~~ni~~~---~~s~~e~~~~i~~~~~ 261 (312)
T 2yy7_A 192 FYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKI-KIHSSYNLAAM---SFTPTEIANEIKKHIP 261 (312)
T ss_dssp HHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGC-CCSSCEECCSE---EECHHHHHHHHHTTCT
T ss_pred HHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCccccc-ccCceEEeCCC---ccCHHHHHHHHHHHCC
Confidence 3344443334556788899999999999999999998754310 01379999854 8999999999999885
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-27 Score=215.89 Aligned_cols=248 Identities=15% Similarity=0.043 Sum_probs=181.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+...... +... .....+++++.+|++++ +.+..++
T Consensus 23 ~~l~~~L~~~--g~~V~~~~r~~~~~~~---~~~~---------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 76 (357)
T 1rkx_A 23 GWLSLWLQTM--GATVKGYSLTAPTVPS---LFET---------------ARVADGMQSEIGDIRDQ------NKLLESI 76 (357)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCSSSSC---HHHH---------------TTTTTTSEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCeEEEEeCCCcccch---hhHh---------------hccCCceEEEEccccCH------HHHHHHH
Confidence 3789999998 8999999997543321 1100 00134789999999986 6788887
Q ss_pred cC--ccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc---ccccccCCCCCCh
Q psy7539 81 ET--IHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK---VLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~---~~~E~~~~~p~~~ 152 (318)
++ +|+|||+||.... ...+...+++|+.|+.+++++|.+.+.+++|||+||.++|+... +.+|+.+..|.
T Consensus 77 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~-- 154 (357)
T 1rkx_A 77 REFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY-- 154 (357)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS--
T ss_pred HhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCC--
Confidence 75 8999999996432 23355789999999999999999863489999999999887643 45555443333
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-c---------CCcEEEecccccccccCCCCCCc
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-A---------GMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~---------~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
+.|+.||+++|+++..+.. . |++++++||+.+||+...+.
T Consensus 155 ---------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~--- 204 (357)
T 1rkx_A 155 ---------------------------DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL--- 204 (357)
T ss_dssp ---------------------------SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS---
T ss_pred ---------------------------CccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc---
Confidence 8999999999999988865 3 89999999999999653211
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHH
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGK 302 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~ 302 (318)
-.-...++..+..+.... .+++.+.++|+||+|+|++++.++.+....+...+++||++++...++++.|+++.+.
T Consensus 205 ---~~~~~~~~~~~~~g~~~~-~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~ 280 (357)
T 1rkx_A 205 ---DRIVPDILRAFEQSQPVI-IRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMV 280 (357)
T ss_dssp ---SCHHHHHHHHHHTTCCEE-CSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHH
T ss_pred ---ccHHHHHHHHHhcCCCEE-ECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHH
Confidence 011234566666665433 3467889999999999999999987521000002689999973115899999999999
Q ss_pred HhhcccCC
Q psy7539 303 DIARNKVP 310 (318)
Q Consensus 303 ~~~~~~~p 310 (318)
+.+|.+.+
T Consensus 281 ~~~g~~~~ 288 (357)
T 1rkx_A 281 KYWGEGAS 288 (357)
T ss_dssp HHHCTTCC
T ss_pred HHhCCCCc
Confidence 99976543
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-26 Score=208.68 Aligned_cols=251 Identities=15% Similarity=0.131 Sum_probs=179.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCC-CCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKN-KNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~-~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|+++.|.... ....+.+.+. ...+++++.+|++++ +.+..+
T Consensus 14 ~~l~~~L~~~--G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~------~~~~~~ 68 (338)
T 1udb_A 14 SHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERL-----------------GGKHPTFVEGDIRNE------ALMTEI 68 (338)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHH-----------------HTSCCEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEecCCCcchhHHHHHHhh-----------------cCCcceEEEccCCCH------HHHHHH
Confidence 4789999998 9999999875332 2222222211 124688999999976 577777
Q ss_pred hc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCC-CC
Q psy7539 80 SE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPP-VS 151 (318)
Q Consensus 80 ~~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p-~~ 151 (318)
++ ++|+|||+||..... ......+++|+.|+.+++++|++. ++++|||+||.++++... +++|+.+..| .
T Consensus 69 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~- 146 (338)
T 1udb_A 69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDNPKIPYVESFPTGTPQ- 146 (338)
T ss_dssp HHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS-
T ss_pred hhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHhCCCCCCCcCcccCCCCCC-
Confidence 76 599999999975432 234568899999999999999985 789999999998887532 5566543322 2
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-c-CCcEEEecccccccccCCCCCCcccC-C-C
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-A-GMPCMILRPSIIIPIWKDPLPGWTDN-I-N 227 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~-~~~~~ilR~~~v~G~~~~~~~g~~~~-~-~ 227 (318)
+.|+.||+++|+++..+.. . +++++++||+++||+...+..|.... . .
T Consensus 147 ----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~ 198 (338)
T 1udb_A 147 ----------------------------SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPN 198 (338)
T ss_dssp ----------------------------SHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCC
T ss_pred ----------------------------ChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchh
Confidence 8999999999999999876 4 89999999999999754333221111 0 1
Q ss_pred chHHHHHHHhc--CceeeEec------CCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHH
Q psy7539 228 GPTGLLIGAGK--GIIRTMYC------DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 299 (318)
Q Consensus 228 ~~~~~~~~~~~--~~~~~~~~------~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~ 299 (318)
.....+..... +....+.+ ++.+.++|+|++|+|++++.++++.... ..+++||++++ .++++.|+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~--~~~~~yni~~~--~~~s~~e~~~ 274 (338)
T 1udb_A 199 NLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANK--PGVHIYNLGAG--VGNSVLDVVN 274 (338)
T ss_dssp SHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTC--CEEEEEEESCS--CCEEHHHHHH
T ss_pred hHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhcc--CCCcEEEecCC--CceeHHHHHH
Confidence 12223333332 22223333 5678899999999999999999864211 01379999998 8999999999
Q ss_pred HHHHhhcccCC
Q psy7539 300 NGKDIARNKVP 310 (318)
Q Consensus 300 ~i~~~~~~~~p 310 (318)
.+.+.+|.+.|
T Consensus 275 ~i~~~~g~~~~ 285 (338)
T 1udb_A 275 AFSKACGKPVN 285 (338)
T ss_dssp HHHHHHTSCCC
T ss_pred HHHHHhCCCCc
Confidence 99999876544
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-27 Score=218.46 Aligned_cols=252 Identities=14% Similarity=0.029 Sum_probs=181.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC--------------CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCC
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK--------------NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 66 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~--------------~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~ 66 (318)
++|+++|+++ |++|+++.|..... ...+++.... .....+++++.+|+++
T Consensus 25 ~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------------~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 25 WATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK--------------ALTGKSIELYVGDICD 88 (404)
T ss_dssp HHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHH--------------HHHCCCCEEEESCTTS
T ss_pred HHHHHHHHhC--CCeEEEEEecCccccccccccccccccchhhhhhhhHh--------------hccCCceEEEECCCCC
Confidence 4789999998 99999998842110 0011121110 1113578999999997
Q ss_pred CCCCCCHHHHHHHhcC--ccEEEEcccccCcch---hH---HHHHHHhHHHHHHHHHHHHhcCCC-ccEEEEeccccccC
Q psy7539 67 PDLGISAEDRQMLSET--IHIVYHIAATVRFDD---YM---QTYVFLNTRGTRDMLNLSKQMIHL-QLFVYVSTAYCHPK 137 (318)
Q Consensus 67 ~~~gl~~~~~~~~~~~--~d~Vih~Aa~~~~~~---~~---~~~~~~Nv~gt~~ll~~a~~~~~~-~~~v~~SS~~~~~~ 137 (318)
+ +.+..++++ +|+|||+||...... .. ...+++|+.|+.+++++|.+. ++ ++|||+||.++|+.
T Consensus 89 ~------~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~~~V~~SS~~vyg~ 161 (404)
T 1i24_A 89 F------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECHLVKLGTMGEYGT 161 (404)
T ss_dssp H------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGGCC
T ss_pred H------HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CCCcEEEEeCcHHHhCC
Confidence 6 678888876 999999999754321 12 347899999999999999986 66 59999999988875
Q ss_pred Cc-ccccccCC-----------CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEE
Q psy7539 138 EK-VLEEKTYP-----------PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCM 204 (318)
Q Consensus 138 ~~-~~~E~~~~-----------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ 204 (318)
.. +++|+... .|.. +.+.|+.||+++|+++..+.. .|++++
T Consensus 162 ~~~~~~E~~~~~~~~~~~~~~~~~~~--------------------------~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ 215 (404)
T 1i24_A 162 PNIDIEEGYITITHNGRTDTLPYPKQ--------------------------ASSFYHLSKVHDSHNIAFTCKAWGIRAT 215 (404)
T ss_dssp CSSCBCSSEEEEEETTEEEEEECCCC--------------------------CCSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred CCCCCCccccccccccccccccCCCC--------------------------CCChhHHHHHHHHHHHHHHHHhcCCeEE
Confidence 43 44443110 1111 128999999999999998876 699999
Q ss_pred EecccccccccCCCC---CCccc-----CC--CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCC
Q psy7539 205 ILRPSIIIPIWKDPL---PGWTD-----NI--NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSN 274 (318)
Q Consensus 205 ilR~~~v~G~~~~~~---~g~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~ 274 (318)
++||++|||+...+. +++.. +. .....++..+..|....+++++.+.++|+||+|+|++++.++.++..
T Consensus 216 ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~- 294 (404)
T 1i24_A 216 DLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK- 294 (404)
T ss_dssp EEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC-
T ss_pred EEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCccc-
Confidence 999999999765321 11110 10 11345677777776666778899999999999999999999987653
Q ss_pred CCCCC--cEEEeeCCCCCceeHHHHHHHHHHh---hccc
Q psy7539 275 PGNTM--RVINLTANKDFQITWYDIIENGKDI---ARNK 308 (318)
Q Consensus 275 ~~~~~--~~~ni~~~~~~~~~~~el~~~i~~~---~~~~ 308 (318)
.+ ++||+++. ++++.|+++.+.+. .|.+
T Consensus 295 ---~g~~~~yni~~~---~~s~~e~~~~i~~~~~~~g~~ 327 (404)
T 1i24_A 295 ---AGEFRVFNQFTE---QFSVNELASLVTKAGSKLGLD 327 (404)
T ss_dssp ---TTCEEEEEECSE---EEEHHHHHHHHHHHHHTTTCC
T ss_pred ---CCCceEEEECCC---CCcHHHHHHHHHHHHHhhCCC
Confidence 14 69999874 79999999999987 5544
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-28 Score=225.36 Aligned_cols=252 Identities=17% Similarity=0.149 Sum_probs=177.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|++. |++|++++|+.......+++.+.+...+-..+. .....+++++.+|++++. .+. ..
T Consensus 83 ~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~-----~~~~~~v~~v~~Dl~d~~------~l~-~~ 148 (427)
T 4f6c_A 83 AYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETV-----EMMLSNIEVIVGDFECMD------DVV-LP 148 (427)
T ss_dssp HHHHHHHTTT--EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHH-----HHHHTTEEEEEECC---C------CCC-CS
T ss_pred HHHHHHHHcC--CCEEEEEECCCChHHHHHHHHHHHHHhcccccc-----ccccCceEEEeCCCCCcc------cCC-Cc
Confidence 3688999776 899999999866544566666554322111010 223468999999999842 222 56
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccC-------CcccccccCCCCCChh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK-------EKVLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~-------~~~~~E~~~~~p~~~~ 153 (318)
.++|+|||+||.......+...+++|+.|+.+++++|.+ ++++|||+||.++ +. ..+++|+....+..
T Consensus 149 ~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~-- 223 (427)
T 4f6c_A 149 ENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQL-- 223 (427)
T ss_dssp SCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCC--
T ss_pred CCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCCCCCccccccccccCCC--
Confidence 799999999999876677778999999999999999998 6789999999888 43 12556655422221
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
+.+.|+.||+++|++++.+.+.|++++++||++|||+...+.............++
T Consensus 224 ------------------------~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~ 279 (427)
T 4f6c_A 224 ------------------------LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVM 279 (427)
T ss_dssp ------------------------CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHH
T ss_pred ------------------------CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHH
Confidence 12899999999999999987679999999999999977543211000001123455
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHH
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKD 303 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~ 303 (318)
.....+.... .+.+++.++|++++|+|++++.++..+.. +++||++++ .++++.|+++.+++
T Consensus 280 ~~~~~~~~~~-~~~~~~~~~~v~v~DvA~ai~~~~~~~~~-----g~~~~l~~~--~~~s~~el~~~i~~ 341 (427)
T 4f6c_A 280 NDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQVNTP-----QIIYHVLSP--NKMPVKSLLECVKR 341 (427)
T ss_dssp HHHHHSSEEE-HHHHTCEECCEEHHHHHHHHHHHTTSCCC-----CSEEEESCS--CCEEHHHHHHHHHS
T ss_pred HHHHhcCCCC-CccccceEEEeeHHHHHHHHHHHHcCCCC-----CCEEEecCC--CCCcHHHHHHHHHH
Confidence 5555543222 23468999999999999999999987663 789999999 89999999999987
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=9.5e-28 Score=212.95 Aligned_cols=233 Identities=13% Similarity=0.126 Sum_probs=166.5
Q ss_pred ChhHHHHHhhCCC-cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCEN-VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~-~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ | ++|+++.|....... +. ..+++ +.+|++++ +.+..+
T Consensus 13 ~~l~~~L~~~--g~~~V~~~~r~~~~~~~-~~----------------------~~~~~-~~~d~~~~------~~~~~~ 60 (310)
T 1eq2_A 13 SNIVKALNDK--GITDILVVDNLKDGTKF-VN----------------------LVDLN-IADYMDKE------DFLIQI 60 (310)
T ss_dssp HHHHHHHHTT--TCCCEEEEECCSSGGGG-HH----------------------HHTSC-CSEEEEHH------HHHHHH
T ss_pred HHHHHHHHHC--CCcEEEEEccCCCCchh-hh----------------------cCcce-eccccccH------HHHHHH
Confidence 4789999998 8 799999996543210 00 01233 67888765 567777
Q ss_pred hcC-----ccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCC
Q psy7539 80 SET-----IHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVS 151 (318)
Q Consensus 80 ~~~-----~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~ 151 (318)
+++ +|+|||+||.... ......++++|+.|+.+++++|.+. ++ +|||+||.++++... +++|+.+..|.
T Consensus 61 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~- 137 (310)
T 1eq2_A 61 MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTSDFIESREYEKPL- 137 (310)
T ss_dssp HTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS-
T ss_pred HhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCC-
Confidence 775 9999999998643 3456688999999999999999986 77 999999998887643 56776655544
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc-h
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING-P 229 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~-~ 229 (318)
+.|+.+|+++|+++..+.+ .|++++++||+.+||+...+.. ...+ .
T Consensus 138 ----------------------------~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~----~~~~~~ 185 (310)
T 1eq2_A 138 ----------------------------NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKG----SMASVA 185 (310)
T ss_dssp ----------------------------SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGG----GGSCHH
T ss_pred ----------------------------ChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCC----ccchHH
Confidence 8999999999999999877 7899999999999997543210 0111 2
Q ss_pred HHHHHHHhcCceeeEecCCCc-ccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 230 TGLLIGAGKGIIRTMYCDYST-CADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
..++..+..+....+++++.+ .++|+|++|+|++++.++.++. +++||++++ .++++.|+++.+.+.+|.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 186 FHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV------SGIFNLGTG--RAESFQAVADATLAYHKKG 257 (310)
T ss_dssp HHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC------CEEEEESCS--CCBCHHHHHHHC-------
T ss_pred HHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC------CCeEEEeCC--CccCHHHHHHHHHHHcCCC
Confidence 345566666655456678888 9999999999999999998754 579999998 8999999999999998654
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=213.35 Aligned_cols=228 Identities=16% Similarity=0.065 Sum_probs=174.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCH-HHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNS-RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~-~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|++++|..+.... .+.+. . .....+++++.+|++
T Consensus 21 ~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~------------~----~~~~~~~~~~~~Dl~-------------- 68 (321)
T 3vps_A 21 GHLARALVAS--GEEVTVLDDLRVPPMIPPEGTG------------K----FLEKPVLELEERDLS-------------- 68 (321)
T ss_dssp HHHHHHHHHT--TCCEEEECCCSSCCSSCCTTSS------------E----EECSCGGGCCHHHHT--------------
T ss_pred HHHHHHHHHC--CCEEEEEecCCcccccchhhhh------------h----hccCCCeeEEeCccc--------------
Confidence 4789999998 8999999997552100 00000 0 001124445555543
Q ss_pred hcCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhH
Q psy7539 80 SETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHN 154 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~ 154 (318)
++|+|||+||..... ......++ |+.++.+++++|++. ++++|||+||.++|+... +++|+.+..|.
T Consensus 69 --~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~---- 140 (321)
T 3vps_A 69 --DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEVYGQADTLPTPEDSPLSPR---- 140 (321)
T ss_dssp --TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC----
T ss_pred --cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHHhCCCCCCCCCCCCCCCCC----
Confidence 889999999986532 22234566 999999999999996 799999999999987643 67777665554
Q ss_pred HHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCC-cEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 155 VIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGM-PCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~-~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
+.|+.+|+++|+++..+.. .++ +++++||+.+||+...+. .....+
T Consensus 141 -------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~ 188 (321)
T 3vps_A 141 -------------------------SPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD-------ALVPRL 188 (321)
T ss_dssp -------------------------SHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT-------SHHHHH
T ss_pred -------------------------ChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC-------ChHHHH
Confidence 8999999999999999987 789 999999999999764321 123456
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
+.....+....+++++.+.++|+|++|+|++++.++.++.. + +||++++ .++++.|+++.+. .+|.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-----g-~~~i~~~--~~~s~~e~~~~i~-~~g~~~ 256 (321)
T 3vps_A 189 CANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-----S-VVNFGSG--QSLSVNDVIRILQ-ATSPAA 256 (321)
T ss_dssp HHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-----S-EEEESCS--CCEEHHHHHHHHH-TTCTTC
T ss_pred HHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-----C-eEEecCC--CcccHHHHHHHHH-HhCCCC
Confidence 66666766667788899999999999999999999988764 5 9999999 8999999999999 886553
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-27 Score=212.17 Aligned_cols=233 Identities=13% Similarity=0.121 Sum_probs=180.6
Q ss_pred ChhHHHHHhhCCC-cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCEN-VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~-~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ | ++|+++.|....... . ...++. +.+|++++ +.+..+
T Consensus 60 ~~l~~~L~~~--g~~~V~~~~r~~~~~~~----------------------~-~~~~~~-~~~d~~~~------~~~~~~ 107 (357)
T 2x6t_A 60 SNIVKALNDK--GITDILVVDNLKDGTKF----------------------V-NLVDLN-IADYMDKE------DFLIQI 107 (357)
T ss_dssp HHHHHHHHHT--TCCCEEEEECCSSGGGG----------------------G-GTTTSC-CSEEEEHH------HHHHHH
T ss_pred HHHHHHHHHC--CCcEEEEEecCCCcchh----------------------h-cccCce-EeeecCcH------HHHHHH
Confidence 3789999998 8 799999996432100 0 011333 67888765 567777
Q ss_pred hc-----CccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCC
Q psy7539 80 SE-----TIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVS 151 (318)
Q Consensus 80 ~~-----~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~ 151 (318)
++ ++|+|||+||.... ......++++|+.|+.+++++|.+. ++ +|||+||.++++... +++|+.+..|.
T Consensus 108 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~- 184 (357)
T 2x6t_A 108 MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTSDFIESREYEKPL- 184 (357)
T ss_dssp HTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGCSCSSCCCSSGGGCCCS-
T ss_pred HhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchHHhCCCCCCCcCCcCCCCCC-
Confidence 76 59999999997643 3456689999999999999999985 77 999999998887633 56776655443
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc-h
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING-P 229 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~-~ 229 (318)
+.|+.+|+++|+++..+.. .+++++++||+++||+...+.. .... .
T Consensus 185 ----------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~----~~~~~~ 232 (357)
T 2x6t_A 185 ----------------------------NVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKG----SMASVA 232 (357)
T ss_dssp ----------------------------SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCG----GGSCHH
T ss_pred ----------------------------ChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCc----ccchHH
Confidence 8999999999999999887 7899999999999997643211 0111 2
Q ss_pred HHHHHHHhcCceeeEecCCCc-ccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 230 TGLLIGAGKGIIRTMYCDYST-CADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
..++..+..+....+++++.+ .++|+|++|+|++++.+++++. +++||++++ .++++.|+++.+.+.+|.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 233 FHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV------SGIFNLGTG--RAESFQAVADATLAYHKKG 304 (357)
T ss_dssp HHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC------CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC------CCeEEecCC--CcccHHHHHHHHHHHcCCC
Confidence 345566666665556778888 9999999999999999998754 579999998 8999999999999999765
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=207.68 Aligned_cols=237 Identities=20% Similarity=0.179 Sum_probs=178.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|....... .+.. .....+++++.+|+.++. +
T Consensus 41 ~~l~~~L~~~--g~~V~~~~r~~~~~~~--~~~~----------------~~~~~~~~~~~~D~~~~~-----------~ 89 (343)
T 2b69_A 41 SHLTDKLMMD--GHEVTVVDNFFTGRKR--NVEH----------------WIGHENFELINHDVVEPL-----------Y 89 (343)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSSCCGG--GTGG----------------GTTCTTEEEEECCTTSCC-----------C
T ss_pred HHHHHHHHHC--CCEEEEEeCCCccchh--hhhh----------------hccCCceEEEeCccCChh-----------h
Confidence 3789999998 8999999996432210 0000 001247899999998763 3
Q ss_pred cCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCC--CCCChh
Q psy7539 81 ETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYP--PPVSPH 153 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~--~p~~~~ 153 (318)
.++|+|||+||..... ..+...+++|+.|+.+++++|.+. ++ +|||+||.++++... +++|+... .|..+
T Consensus 90 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~- 166 (343)
T 2b69_A 90 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP- 166 (343)
T ss_dssp CCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSST-
T ss_pred cCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHhCCCCCCCCcccccccCCCCCC-
Confidence 5899999999976432 345678999999999999999986 65 999999998887532 56665321 11111
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
.+.|+.+|+++|+++..+.+ .+++++++||+.+||+...+..+ .....+
T Consensus 167 -------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~-----~~~~~~ 216 (343)
T 2b69_A 167 -------------------------RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDG-----RVVSNF 216 (343)
T ss_dssp -------------------------THHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCC-----CHHHHH
T ss_pred -------------------------CCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcc-----cHHHHH
Confidence 17899999999999998876 79999999999999976432110 112345
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
+.....+....+++++.+.++|+|++|+|++++.++..+. +++||++++ .++++.|+++.+.+.+|.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 285 (343)
T 2b69_A 217 ILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV------SSPVNLGNP--EEHTILEFAQLIKNLVGSGS 285 (343)
T ss_dssp HHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC------CSCEEESCC--CEEEHHHHHHHHHHHHTCCC
T ss_pred HHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC------CCeEEecCC--CCCcHHHHHHHHHHHhCCCC
Confidence 6666677665667888999999999999999999987642 578999998 89999999999999997553
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-27 Score=209.12 Aligned_cols=232 Identities=14% Similarity=0.133 Sum_probs=172.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+ . .+|++++ +.+..++
T Consensus 17 ~~l~~~L~~~--g~~v~~~~r~----------------------------~---------~~D~~d~------~~~~~~~ 51 (321)
T 1e6u_A 17 SAIRRQLEQR--GDVELVLRTR----------------------------D---------ELNLLDS------RAVHDFF 51 (321)
T ss_dssp HHHHHHHTTC--TTEEEECCCT----------------------------T---------TCCTTCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCeEEEEecC----------------------------c---------cCCccCH------HHHHHHH
Confidence 3688888887 8888887762 0 3677765 6788888
Q ss_pred c--CccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC--cccccccCCC-CCC
Q psy7539 81 E--TIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLEEKTYPP-PVS 151 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~--~~~~E~~~~~-p~~ 151 (318)
+ ++|+|||+||.... ......++++|+.++.+++++|.+. ++++|||+||.++|+.. .+++|+.... +..
T Consensus 52 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~ 130 (321)
T 1e6u_A 52 ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLE 130 (321)
T ss_dssp HHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCC
T ss_pred HhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHcCCCCCCCcCccccccCCCC
Confidence 8 99999999998642 2345678999999999999999995 88999999999988753 2566654211 111
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPT 230 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~ 230 (318)
+. .+.|+.+|+++|+++..+.+ .+++++++||+.+||+...+... .-.-..
T Consensus 131 p~-------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~---~~~~~~ 182 (321)
T 1e6u_A 131 PT-------------------------NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPS---NSHVIP 182 (321)
T ss_dssp GG-------------------------GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTT---CSSHHH
T ss_pred CC-------------------------CCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCC---CCccHH
Confidence 10 05899999999999999876 69999999999999976542210 001112
Q ss_pred HHHHHHhc----C-ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCC----CCCCCcEEEeeCCCCCceeHHHHHHHH
Q psy7539 231 GLLIGAGK----G-IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSN----PGNTMRVINLTANKDFQITWYDIIENG 301 (318)
Q Consensus 231 ~~~~~~~~----~-~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~----~~~~~~~~ni~~~~~~~~~~~el~~~i 301 (318)
.++..+.. | ....+++++.+.++|+|++|+|++++.+++++... ....+++||++++ .++++.|+++.+
T Consensus 183 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i 260 (321)
T 1e6u_A 183 ALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTG--VDCTIRELAQTI 260 (321)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCS--CCEEHHHHHHHH
T ss_pred HHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCC--CCccHHHHHHHH
Confidence 34444433 3 33456788999999999999999999999875420 0001479999998 899999999999
Q ss_pred HHhhccc
Q psy7539 302 KDIARNK 308 (318)
Q Consensus 302 ~~~~~~~ 308 (318)
.+.+|.+
T Consensus 261 ~~~~g~~ 267 (321)
T 1e6u_A 261 AKVVGYK 267 (321)
T ss_dssp HHHHTCC
T ss_pred HHHhCCC
Confidence 9998754
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=211.81 Aligned_cols=246 Identities=15% Similarity=0.061 Sum_probs=182.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+.... +++..+.. ... .....+++++.+|++++ +.+..++
T Consensus 38 ~~l~~~L~~~--g~~V~~~~r~~~~~~~-~~~~~l~~-----~~~-----~~~~~~~~~~~~Dl~d~------~~~~~~~ 98 (375)
T 1t2a_A 38 SYLAEFLLEK--GYEVHGIVRRSSSFNT-GRIEHLYK-----NPQ-----AHIEGNMKLHYGDLTDS------TCLVKII 98 (375)
T ss_dssp HHHHHHHHHT--TCEEEEEECCCSSCCC-TTTGGGC-------------------CEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCccccch-hhHHHHhh-----hhc-----cccCCCceEEEccCCCH------HHHHHHH
Confidence 3789999998 8999999997543110 00100000 000 00124788999999976 6788877
Q ss_pred cC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCC---ccEEEEeccccccCCc--ccccccCCCCC
Q psy7539 81 ET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHL---QLFVYVSTAYCHPKEK--VLEEKTYPPPV 150 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~---~~~v~~SS~~~~~~~~--~~~E~~~~~p~ 150 (318)
++ +|+|||+||..... ......+++|+.|+.+++++|.+. ++ ++|||+||.++++... +++|+.+..|.
T Consensus 99 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~ 177 (375)
T 1t2a_A 99 NEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSELYGKVQEIPQKETTPFYPR 177 (375)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCC
T ss_pred HhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchhhhCCCCCCCCCccCCCCCC
Confidence 74 79999999986543 345678999999999999999985 66 7999999998887532 66776554444
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc-
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING- 228 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~- 228 (318)
+.|+.||+++|.++..+.. .+++++++|++.+||+...+ +...
T Consensus 178 -----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~------~~~~~ 222 (375)
T 1t2a_A 178 -----------------------------SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGA------NFVTR 222 (375)
T ss_dssp -----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT------TSHHH
T ss_pred -----------------------------ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCC------CcchH
Confidence 8999999999999998877 69999999999999965321 1111
Q ss_pred -hHHHHHHHhcCcee-eEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 229 -PTGLLIGAGKGIIR-TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 229 -~~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
...++..+..|... ..++++++.++|+|++|+|++++.+++++. .++||++++ .++++.|+++.+.+.+|
T Consensus 223 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~------~~~~ni~~~--~~~s~~e~~~~i~~~~g 294 (375)
T 1t2a_A 223 KISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE------PEDFVIATG--EVHSVREFVEKSFLHIG 294 (375)
T ss_dssp HHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS------CCCEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC------CceEEEeCC--CcccHHHHHHHHHHHhC
Confidence 12344455555432 456788999999999999999999998653 478999998 89999999999999987
Q ss_pred ccC
Q psy7539 307 NKV 309 (318)
Q Consensus 307 ~~~ 309 (318)
.+.
T Consensus 295 ~~~ 297 (375)
T 1t2a_A 295 KTI 297 (375)
T ss_dssp CCE
T ss_pred CCc
Confidence 653
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=206.02 Aligned_cols=235 Identities=17% Similarity=0.090 Sum_probs=176.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++..+++|+++.|+.+.. .+++++.+|++++ +.+..++
T Consensus 13 ~~l~~~L~~~~~g~~V~~~~r~~~~~----------------------------~~~~~~~~D~~d~------~~~~~~~ 58 (317)
T 3ajr_A 13 TELVPYLAEKYGKKNVIASDIVQRDT----------------------------GGIKFITLDVSNR------DEIDRAV 58 (317)
T ss_dssp HHHHHHHHHHHCGGGEEEEESSCCCC----------------------------TTCCEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEecCCCccc----------------------------cCceEEEecCCCH------HHHHHHH
Confidence 36888998762357999999864322 1467889999986 6788888
Q ss_pred c--CccEEEEcccccCc--chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc---ccccccCCCCCChh
Q psy7539 81 E--TIHIVYHIAATVRF--DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK---VLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~---~~~E~~~~~p~~~~ 153 (318)
+ ++|+|||+||.... ...+...+++|+.|+.+++++|.+. ++++|||+||.++++... +.+|..+..|.
T Consensus 59 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~--- 134 (317)
T 3ajr_A 59 EKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFGPETPKNKVPSITITRPR--- 134 (317)
T ss_dssp HHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC---
T ss_pred hhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCCCCCCccccccCCCC---
Confidence 7 89999999997532 2345678999999999999999985 889999999999887532 45555444443
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
+.|+.||+++|+++..+.+ .+++++++||+.+||....+..+. .......
T Consensus 135 --------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~---~~~~~~~ 185 (317)
T 3ajr_A 135 --------------------------TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGT---TDYAVEI 185 (317)
T ss_dssp --------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCS---STHHHHH
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcc---hhHHHHH
Confidence 8999999999999998876 799999999999999754332111 0112233
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
+.....+.....++++++.++|+|++|+|++++.++.++... ...+++||++++ .+++.|+++.+.+.+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~-~~~g~~~~i~~~---~~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 186 FYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDK-LVLRNGYNVTAY---TFTPSELYSKIKERIP 255 (317)
T ss_dssp HHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGG-CSSCSCEECCSE---EECHHHHHHHHHTTCC
T ss_pred HHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccc-cccCceEecCCc---cccHHHHHHHHHHHCC
Confidence 344444333455677888999999999999999999875421 001479999865 7999999999999885
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-26 Score=207.48 Aligned_cols=240 Identities=18% Similarity=0.057 Sum_probs=182.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+...... +++... . ...+++++.+|++++ +.+..++
T Consensus 17 ~~l~~~L~~~--G~~V~~~~r~~~~~~~-~~~~~~---------------~-~~~~~~~~~~Dl~d~------~~~~~~~ 71 (345)
T 2z1m_A 17 AYLAKLLLEK--GYEVYGADRRSGEFAS-WRLKEL---------------G-IENDVKIIHMDLLEF------SNIIRTI 71 (345)
T ss_dssp HHHHHHHHHT--TCEEEEECSCCSTTTT-HHHHHT---------------T-CTTTEEECCCCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCCccccc-ccHhhc---------------c-ccCceeEEECCCCCH------HHHHHHH
Confidence 3789999998 9999999997654321 122211 0 124788999999976 6788877
Q ss_pred cC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCC-ccEEEEeccccccCCc--ccccccCCCCCCh
Q psy7539 81 ET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHL-QLFVYVSTAYCHPKEK--VLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~-~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~ 152 (318)
++ +|+|||+||..... ..+...+++|+.|+.+++++|.+. ++ ++|||+||.++|+... +++|..+..|.
T Consensus 72 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~-- 148 (345)
T 2z1m_A 72 EKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPR-- 148 (345)
T ss_dssp HHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCC--
T ss_pred HhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCCCCCCCccCCCCCC--
Confidence 74 69999999976432 345678999999999999999986 66 8999999998887633 56665544443
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc--h
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING--P 229 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~--~ 229 (318)
+.|+.||+++|.++..+.. .+++++++|+.++||+... .+... .
T Consensus 149 ---------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~------~~~~~~~~ 195 (345)
T 2z1m_A 149 ---------------------------SPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRG------IEFVTRKI 195 (345)
T ss_dssp ---------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC------TTSHHHHH
T ss_pred ---------------------------ChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCC------CcchhHHH
Confidence 8999999999999999877 6899999999999995432 12111 1
Q ss_pred HHHHHHHhcCce-eeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 230 TGLLIGAGKGII-RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 230 ~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
..++.....+.. ....+++.+.++|+|++|+|++++.++.++. .+.||++++ .++++.|+++.+.+.+|.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 267 (345)
T 2z1m_A 196 TYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE------PDDYVIATG--ETHTVREFVEKAAKIAGFD 267 (345)
T ss_dssp HHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS------CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC------CceEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 123344445533 2356788899999999999999999997653 468999998 8999999999999999765
Q ss_pred C
Q psy7539 309 V 309 (318)
Q Consensus 309 ~ 309 (318)
.
T Consensus 268 ~ 268 (345)
T 2z1m_A 268 I 268 (345)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=203.02 Aligned_cols=209 Identities=20% Similarity=0.192 Sum_probs=168.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|++++|. .+|++++ +.+..++
T Consensus 19 ~~l~~~L~~~--g~~V~~~~r~--------------------------------------~~D~~d~------~~~~~~~ 52 (287)
T 3sc6_A 19 KQLQEELNPE--EYDIYPFDKK--------------------------------------LLDITNI------SQVQQVV 52 (287)
T ss_dssp HHHHHHSCTT--TEEEEEECTT--------------------------------------TSCTTCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCEEEEeccc--------------------------------------ccCCCCH------HHHHHHH
Confidence 3678888887 8899999881 4677765 6788887
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC--cccccccCCCCCChh
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE--KVLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~--~~~~E~~~~~p~~~~ 153 (318)
+ ++|+|||+||..... ..+...+++|+.|+.+++++|++. ++ +|||+||.++|+.. .+++|+.+..|.
T Consensus 53 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~--- 127 (287)
T 3sc6_A 53 QEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQGDRPEGYDEFHNPAPI--- 127 (287)
T ss_dssp HHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCCCCSSCBCTTSCCCCC---
T ss_pred HhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcCCCCCCCCCCCCCCCCC---
Confidence 7 799999999987543 356689999999999999999986 66 69999999998764 377887766665
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
+.|+.+|+++|+++..+.. +++++||+.+||+... + ....++
T Consensus 128 --------------------------~~Y~~sK~~~E~~~~~~~~---~~~ilR~~~v~G~~~~-------~--~~~~~~ 169 (287)
T 3sc6_A 128 --------------------------NIYGASKYAGEQFVKELHN---KYFIVRTSWLYGKYGN-------N--FVKTMI 169 (287)
T ss_dssp --------------------------SHHHHHHHHHHHHHHHHCS---SEEEEEECSEECSSSC-------C--HHHHHH
T ss_pred --------------------------CHHHHHHHHHHHHHHHhCC---CcEEEeeeeecCCCCC-------c--HHHHHH
Confidence 8999999999999998854 7899999999996432 1 123455
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
.....+....+.+ ++.++|+|++|+|++++.++.++. +++||++++ .++++.|+++.+++.+|.+
T Consensus 170 ~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 234 (287)
T 3sc6_A 170 RLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSL------YGTYHVSNT--GSCSWFEFAKKIFSYANMK 234 (287)
T ss_dssp HHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCC------CEEEECCCB--SCEEHHHHHHHHHHHHTCC
T ss_pred HHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCC------CCeEEEcCC--CcccHHHHHHHHHHHcCCC
Confidence 5555565444443 489999999999999999998765 579999999 8999999999999999754
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-27 Score=205.20 Aligned_cols=212 Identities=15% Similarity=0.086 Sum_probs=166.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|++++|+.+.. +.+ ...+++++.+|+++. + +
T Consensus 18 ~~l~~~L~~~--g~~V~~~~r~~~~~---~~~--------------------~~~~~~~~~~D~~d~------~-----~ 61 (286)
T 3ius_A 18 RVLSRALAPQ--GWRIIGTSRNPDQM---EAI--------------------RASGAEPLLWPGEEP------S-----L 61 (286)
T ss_dssp HHHHHHHGGG--TCEEEEEESCGGGH---HHH--------------------HHTTEEEEESSSSCC------C-----C
T ss_pred HHHHHHHHHC--CCEEEEEEcChhhh---hhH--------------------hhCCCeEEEeccccc------c-----c
Confidence 4789999999 99999999964321 111 124789999999873 1 6
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCc--ccccccCCCCCChhHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~~~ 157 (318)
+++|+|||+|+......+ .+.+++++|++. .++++|||+||.++|+... +++|+.+..|.
T Consensus 62 ~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~------- 124 (286)
T 3ius_A 62 DGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT------- 124 (286)
T ss_dssp TTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC-------
T ss_pred CCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC-------
Confidence 799999999998654432 256888999873 3789999999999988643 67887766655
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHh
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAG 237 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~ 237 (318)
+.|+.+|+++|+++..+ .+++++++||+.+||+...+.. .+.
T Consensus 125 ----------------------~~Y~~sK~~~E~~~~~~--~~~~~~ilRp~~v~G~~~~~~~--------------~~~ 166 (286)
T 3ius_A 125 ----------------------AARGRWRVMAEQQWQAV--PNLPLHVFRLAGIYGPGRGPFS--------------KLG 166 (286)
T ss_dssp ----------------------SHHHHHHHHHHHHHHHS--TTCCEEEEEECEEEBTTBSSST--------------TSS
T ss_pred ----------------------CHHHHHHHHHHHHHHhh--cCCCEEEEeccceECCCchHHH--------------HHh
Confidence 89999999999999988 4899999999999997643321 122
Q ss_pred cCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCCC
Q psy7539 238 KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVPL 311 (318)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p~ 311 (318)
.+....+.+ +.+.++|+|++|+|++++.++.++.. +++||++++ .++++.|+++.+.+.+|.+.|.
T Consensus 167 ~~~~~~~~~-~~~~~~~i~v~Dva~a~~~~~~~~~~-----g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~~~ 232 (286)
T 3ius_A 167 KGGIRRIIK-PGQVFSRIHVEDIAQVLAASMARPDP-----GAVYNVCDD--EPVPPQDVIAYAAELQGLPLPP 232 (286)
T ss_dssp SSCCCEEEC-TTCCBCEEEHHHHHHHHHHHHHSCCT-----TCEEEECCS--CCBCHHHHHHHHHHHHTCCCCC
T ss_pred cCCccccCC-CCcccceEEHHHHHHHHHHHHhCCCC-----CCEEEEeCC--CCccHHHHHHHHHHHcCCCCCc
Confidence 344334443 36889999999999999999998764 789999999 8899999999999999776553
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=209.26 Aligned_cols=245 Identities=16% Similarity=0.074 Sum_probs=179.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+.+... .+++..+... . .....+++++.+|++++ +.+..++
T Consensus 15 ~~l~~~L~~~--g~~V~~~~r~~~~~~-~~~~~~~~~~-----~------~~~~~~~~~~~~Dl~d~------~~~~~~~ 74 (372)
T 1db3_A 15 SYLAEFLLEK--GYEVHGIKRRASSFN-TERVDHIYQD-----P------HTCNPKFHLHYGDLSDT------SNLTRIL 74 (372)
T ss_dssp HHHHHHHHHT--TCEEEEECC---------------------------------CCEEECCCCSSCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCCcccc-hHHHHHHhhc-----c------ccCCCceEEEECCCCCH------HHHHHHH
Confidence 3789999998 899999999754311 1122211000 0 00124788999999976 6788877
Q ss_pred cC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCC---ccEEEEeccccccCCc--ccccccCCCCC
Q psy7539 81 ET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHL---QLFVYVSTAYCHPKEK--VLEEKTYPPPV 150 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~---~~~v~~SS~~~~~~~~--~~~E~~~~~p~ 150 (318)
++ +|+|||+||..... ......+++|+.|+.+++++|.+. ++ ++|||+||.++++... +++|+.+..|.
T Consensus 75 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~ 153 (372)
T 1db3_A 75 REVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR 153 (372)
T ss_dssp HHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC
T ss_pred HhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCC
Confidence 74 79999999975432 345578899999999999999985 66 7999999998887633 66776555444
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCC-c
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNIN-G 228 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~-~ 228 (318)
+.|+.||.++|+++..+.. .+++++++|++.+||+.... +.. .
T Consensus 154 -----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~------~~~~~ 198 (372)
T 1db3_A 154 -----------------------------SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGE------TFVTR 198 (372)
T ss_dssp -----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT------TSHHH
T ss_pred -----------------------------ChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCC------cchhh
Confidence 8999999999999998877 78999999999999965321 111 0
Q ss_pred -hHHHHHHHhcCce-eeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 229 -PTGLLIGAGKGII-RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 229 -~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
...++..+..|.. ...++++++.++|+|++|+|++++.+++++. .++||++++ .++++.|+++.+.+.+|
T Consensus 199 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~------~~~~ni~~~--~~~s~~e~~~~i~~~~g 270 (372)
T 1db3_A 199 KITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ------PEDFVIATG--VQYSVRQFVEMAAAQLG 270 (372)
T ss_dssp HHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS------CCCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC------CceEEEcCC--CceeHHHHHHHHHHHhC
Confidence 1234445555643 3456888999999999999999999997643 478999998 89999999999999997
Q ss_pred ccC
Q psy7539 307 NKV 309 (318)
Q Consensus 307 ~~~ 309 (318)
.+.
T Consensus 271 ~~~ 273 (372)
T 1db3_A 271 IKL 273 (372)
T ss_dssp EEE
T ss_pred CCc
Confidence 654
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=207.34 Aligned_cols=258 Identities=15% Similarity=0.094 Sum_probs=176.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEE-eccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPI-NGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|++++|+.+ ..+.+...+. .....+++++ .+|++++ +.+..+
T Consensus 25 ~~l~~~L~~~--g~~V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~~~~D~~d~------~~~~~~ 80 (342)
T 1y1p_A 25 SHVVEQLLEH--GYKVRGTARSAS---KLANLQKRWD-------------AKYPGRFETAVVEDMLKQ------GAYDEV 80 (342)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHH---HHHHHHHHHH-------------HHSTTTEEEEECSCTTST------TTTTTT
T ss_pred HHHHHHHHHC--CCEEEEEeCCcc---cHHHHHHHhh-------------ccCCCceEEEEecCCcCh------HHHHHH
Confidence 4789999998 999999999532 1122221110 1112478888 8999987 367777
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC------cccccccCCCCCChh
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE------KVLEEKTYPPPVSPH 153 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~------~~~~E~~~~~p~~~~ 153 (318)
++++|+|||+||.......+...+++|+.|+.+++++|.+..++++|||+||.++++.. .+++|+....
T Consensus 81 ~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~----- 155 (342)
T 1y1p_A 81 IKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNL----- 155 (342)
T ss_dssp TTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCH-----
T ss_pred HcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCc-----
Confidence 78999999999987655566789999999999999999853478999999998887532 2455543210
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-c--CCcEEEecccccccccCCCCCCcccCCCchH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-A--GMPCMILRPSIIIPIWKDPLPGWTDNINGPT 230 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~--~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~ 230 (318)
......+ .........+ .+.|+.||+++|++++.+.+ . +++++++||+++||+...+... . ....
T Consensus 156 -~~~~~~~-~~~~~~~~~~------~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~---~-~~~~ 223 (342)
T 1y1p_A 156 -ESIDKAK-TLPESDPQKS------LWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQ---S-GSTS 223 (342)
T ss_dssp -HHHHHHH-HSCTTSTTHH------HHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTC---C-CHHH
T ss_pred -hhhhhhc-cccccccccc------hHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCC---C-ccHH
Confidence 0000000 0000000001 17899999999999998876 3 7889999999999976543210 0 1234
Q ss_pred HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcc
Q psy7539 231 GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARN 307 (318)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~ 307 (318)
.++..+..+....+.+++ +.++|+|++|+|++++.++.++.. .+..| ++++ .++++.|+++.+.+.+|.
T Consensus 224 ~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~----~g~~~-~~~g--~~~s~~e~~~~i~~~~~~ 292 (342)
T 1y1p_A 224 GWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQI----ERRRV-YGTA--GTFDWNTVLATFRKLYPS 292 (342)
T ss_dssp HHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTC----CSCEE-EECC--EEECHHHHHHHHHHHCTT
T ss_pred HHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCccc----CCceE-EEeC--CCCCHHHHHHHHHHHCCC
Confidence 566666666544334444 678999999999999999987543 24444 3455 589999999999999865
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=202.27 Aligned_cols=239 Identities=15% Similarity=0.152 Sum_probs=180.4
Q ss_pred ChhHHHHHhhCCC-------cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCH
Q psy7539 1 KVLLEKILRTCEN-------VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISA 73 (318)
Q Consensus 1 ~~l~~~Ll~~~~~-------~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~ 73 (318)
++|+++|+++ | ++|+++.|..+... .....+++++.+|++++
T Consensus 28 ~~l~~~L~~~--g~~~~r~~~~V~~~~r~~~~~~-----------------------~~~~~~~~~~~~Dl~d~------ 76 (342)
T 2hrz_A 28 RKLTQRLVKD--GSLGGKPVEKFTLIDVFQPEAP-----------------------AGFSGAVDARAADLSAP------ 76 (342)
T ss_dssp HHHHHHHHHH--CEETTEEEEEEEEEESSCCCCC-----------------------TTCCSEEEEEECCTTST------
T ss_pred HHHHHHHHhc--CCcccCCCceEEEEEccCCccc-----------------------cccCCceeEEEcCCCCH------
Confidence 3789999998 8 79999999754321 11134788999999987
Q ss_pred HHHHHHhc-CccEEEEcccccCc--chhHHHHHHHhHHHHHHHHHHHHhcC----CCccEEEEeccccccCC--cccccc
Q psy7539 74 EDRQMLSE-TIHIVYHIAATVRF--DDYMQTYVFLNTRGTRDMLNLSKQMI----HLQLFVYVSTAYCHPKE--KVLEEK 144 (318)
Q Consensus 74 ~~~~~~~~-~~d~Vih~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~----~~~~~v~~SS~~~~~~~--~~~~E~ 144 (318)
+.+..+++ ++|+|||+||.... ...+...+++|+.|+.+++++|.+.. .+++|||+||.++++.. .+++|+
T Consensus 77 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~ 156 (342)
T 2hrz_A 77 GEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE 156 (342)
T ss_dssp THHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT
T ss_pred HHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC
Confidence 47887774 89999999997542 23456789999999999999999852 27899999999888763 367776
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcc
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWT 223 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~ 223 (318)
.+..|. +.|+.||+++|+++..+.. .+++.+++|++.+||.....
T Consensus 157 ~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~----- 202 (342)
T 2hrz_A 157 FHTTPL-----------------------------TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKP----- 202 (342)
T ss_dssp CCCCCS-----------------------------SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSC-----
T ss_pred CCCCCc-----------------------------chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCC-----
Confidence 655544 8999999999999999877 67999999999999843211
Q ss_pred cCCC-c-hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHH
Q psy7539 224 DNIN-G-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENG 301 (318)
Q Consensus 224 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i 301 (318)
.+.. . ...++.....+....++.+++...+++|++|+|++++.++..+... ...+++||+++ .++++.|+++.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~-~~~~~~~ni~g---~~~s~~e~~~~i 278 (342)
T 2hrz_A 203 NAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEK-VGPRRNLSMPG---LSATVGEQIEAL 278 (342)
T ss_dssp CCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHH-HCSCCEEECCC---EEEEHHHHHHHH
T ss_pred cchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccc-cCCccEEEcCC---CCCCHHHHHHHH
Confidence 1111 1 1345556666665556666677888999999999999999765310 00267999964 479999999999
Q ss_pred HHhhccc
Q psy7539 302 KDIARNK 308 (318)
Q Consensus 302 ~~~~~~~ 308 (318)
.+.+|.+
T Consensus 279 ~~~~g~~ 285 (342)
T 2hrz_A 279 RKVAGEK 285 (342)
T ss_dssp HHHHCHH
T ss_pred HHHcCcc
Confidence 9988654
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.5e-26 Score=206.76 Aligned_cols=244 Identities=14% Similarity=0.068 Sum_probs=180.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhcc-ceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFE-KVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|++.|+++ |++|++++|+.+.... +++... .... ..... +++++.+|++++ +.+..+
T Consensus 42 ~~l~~~L~~~--g~~V~~~~r~~~~~~~-~~~~~~-----~~~~------~~~~~~~~~~~~~Dl~d~------~~~~~~ 101 (381)
T 1n7h_A 42 SYLTEFLLGK--GYEVHGLIRRSSNFNT-QRINHI-----YIDP------HNVNKALMKLHYADLTDA------SSLRRW 101 (381)
T ss_dssp HHHHHHHHHT--TCEEEEEECCCSSCCC-TTTTTT-----C--------------CCEEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEecCCccccc-hhhhhh-----hhcc------ccccccceEEEECCCCCH------HHHHHH
Confidence 3789999998 8999999997543110 000000 0000 00112 788999999876 678887
Q ss_pred hcC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCc-----cEEEEeccccccCCc-ccccccCCC
Q psy7539 80 SET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQ-----LFVYVSTAYCHPKEK-VLEEKTYPP 148 (318)
Q Consensus 80 ~~~--~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-----~~v~~SS~~~~~~~~-~~~E~~~~~ 148 (318)
+++ +|+|||+||..... ..+...+++|+.|+.+++++|.+. +++ +|||+||.++|+... +++|+.+..
T Consensus 102 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~ 180 (381)
T 1n7h_A 102 IDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFH 180 (381)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCC
T ss_pred HHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeCcHHHhCCCCCCCCCCCCCC
Confidence 774 69999999986543 345678999999999999999985 555 999999999887633 566665444
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCC
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNIN 227 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~ 227 (318)
|. +.|+.+|+++|+++..+.. .+++++++|++++||+.... +..
T Consensus 181 ~~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~------~~~ 225 (381)
T 1n7h_A 181 PR-----------------------------SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGE------NFV 225 (381)
T ss_dssp CC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT------TSH
T ss_pred CC-----------------------------CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCC------cch
Confidence 43 8999999999999998877 68999999999999964321 111
Q ss_pred c--hHHHHHHHhcCce-eeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHh
Q psy7539 228 G--PTGLLIGAGKGII-RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDI 304 (318)
Q Consensus 228 ~--~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~ 304 (318)
. ...++.....+.. ...++++.+.++|+|++|+|++++.++.++. .++||++++ .++++.|+++.+.+.
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~ 297 (381)
T 1n7h_A 226 TRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK------PDDYVVATE--EGHTVEEFLDVSFGY 297 (381)
T ss_dssp HHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS------CCEEEECCS--CEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC------CCeEEeeCC--CCCcHHHHHHHHHHH
Confidence 1 1234444555543 2346788899999999999999999998754 479999999 899999999999999
Q ss_pred hccc
Q psy7539 305 ARNK 308 (318)
Q Consensus 305 ~~~~ 308 (318)
+|.+
T Consensus 298 ~g~~ 301 (381)
T 1n7h_A 298 LGLN 301 (381)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 8654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=200.44 Aligned_cols=223 Identities=16% Similarity=0.148 Sum_probs=172.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|....... . .....+++++.+|++++ +.+..++
T Consensus 34 ~~l~~~L~~~--g~~V~~~~r~~~~~~~------~---------------~~~l~~v~~~~~Dl~d~------~~~~~~~ 84 (330)
T 2pzm_A 34 SNLIEHWLPQ--GHEILVIDNFATGKRE------V---------------LPPVAGLSVIEGSVTDA------GLLERAF 84 (330)
T ss_dssp HHHHHHHGGG--TCEEEEEECCSSSCGG------G---------------SCSCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCCccchh------h---------------hhccCCceEEEeeCCCH------HHHHHHH
Confidence 3789999998 8999999996433210 0 01115789999999986 6788888
Q ss_pred c--CccEEEEcccccCc--chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc----ccccccCCCCCCh
Q psy7539 81 E--TIHIVYHIAATVRF--DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK----VLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~----~~~E~~~~~p~~~ 152 (318)
+ ++|+|||+||.... ...+ . +++|+.|+.+++++|.+. ++++|||+||.++++... +++|+. .|.
T Consensus 85 ~~~~~D~vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~-- 157 (330)
T 2pzm_A 85 DSFKPTHVVHSAAAYKDPDDWAE-D-AATNVQGSINVAKAASKA-GVKRLLNFQTALCYGRPATVPIPIDSPT--APF-- 157 (330)
T ss_dssp HHHCCSEEEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHH-TCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCC--
T ss_pred hhcCCCEEEECCccCCCccccCh-h-HHHHHHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCccCCCCcCCCC--CCC--
Confidence 8 99999999998654 1233 3 899999999999999985 789999999998886532 455543 222
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
+.|+.+|+++|+++..+ +++.+++||+++||+... . + ....+
T Consensus 158 ---------------------------~~Y~~sK~~~e~~~~~~---~~~~~~iR~~~v~gp~~~--~----~--~~~~~ 199 (330)
T 2pzm_A 158 ---------------------------TSYGISKTAGEAFLMMS---DVPVVSLRLANVTGPRLA--I----G--PIPTF 199 (330)
T ss_dssp ---------------------------SHHHHHHHHHHHHHHTC---SSCEEEEEECEEECTTCC--S----S--HHHHH
T ss_pred ---------------------------ChHHHHHHHHHHHHHHc---CCCEEEEeeeeeECcCCC--C----C--HHHHH
Confidence 89999999999999887 789999999999996421 0 1 12234
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHH-HHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVN-GVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~-~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
+..+..+. ..++++. .++++|++|+|+ +++.++.++. +++||++++ .++++.|+++.+.+.+|.+
T Consensus 200 ~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~------g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 200 YKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP------TGVFNVSTG--EGHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp HHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC------CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC------CCEEEeCCC--CCCCHHHHHHHHHHHhCCC
Confidence 55555554 3445566 899999999999 9999987632 689999998 8999999999999999765
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=219.73 Aligned_cols=252 Identities=14% Similarity=0.076 Sum_probs=184.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ +|++|++++|+.+.... .....+++++.+|++++. +.+..++
T Consensus 329 ~~l~~~Ll~~-~g~~V~~~~r~~~~~~~----------------------~~~~~~v~~v~~Dl~d~~-----~~~~~~~ 380 (660)
T 1z7e_A 329 NHLTERLLRE-DHYEVYGLDIGSDAISR----------------------FLNHPHFHFVEGDISIHS-----EWIEYHV 380 (660)
T ss_dssp HHHHHHHHHS-SSEEEEEEESCCTTTGG----------------------GTTCTTEEEEECCTTTCH-----HHHHHHH
T ss_pred HHHHHHHHhc-CCCEEEEEEcCchhhhh----------------------hccCCceEEEECCCCCcH-----HHHHHhh
Confidence 3788999986 47899999997543210 011247899999999862 2366777
Q ss_pred cCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~~ 155 (318)
+++|+|||+||.... ...+...+++|+.|+.+++++|.+. + ++|||+||.++++... +++|+....+..+
T Consensus 381 ~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p--- 455 (660)
T 1z7e_A 381 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP--- 455 (660)
T ss_dssp HHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCSSSBCTTTCCEEECC---
T ss_pred cCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHHHcCCCCCcccCCCccccccCc---
Confidence 899999999997653 2345678999999999999999985 6 8999999998887632 5666543210000
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCC-chHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNIN-GPTGLL 233 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~-~~~~~~ 233 (318)
...+.+.|+.||+++|+++..+.+ .|++++++||+++||+...+...+..+.. ....++
T Consensus 456 -------------------~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~ 516 (660)
T 1z7e_A 456 -------------------VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLI 516 (660)
T ss_dssp -------------------TTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHH
T ss_pred -------------------ccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHH
Confidence 000116899999999999998876 79999999999999976432100000001 123466
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCC-ceeHHHHHHHHHHhhccc
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF-QITWYDIIENGKDIARNK 308 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~-~~~~~el~~~i~~~~~~~ 308 (318)
..+..+....+++++.+.++|+|++|+|++++.++.+.... ..+++||++++ . ++++.|+++.+.+.+|.+
T Consensus 517 ~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~--~~g~~~ni~~~--~~~~s~~el~~~i~~~~g~~ 588 (660)
T 1z7e_A 517 LNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNR--CDGEIINIGNP--ENEASIEELGEMLLASFEKH 588 (660)
T ss_dssp HHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGT--TTTEEEEECCG--GGEEEHHHHHHHHHHHHHHC
T ss_pred HHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCcccc--CCCeEEEECCC--CCCcCHHHHHHHHHHHhcCC
Confidence 66677766667788899999999999999999999876410 13789999987 6 799999999999988654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-25 Score=218.11 Aligned_cols=254 Identities=18% Similarity=0.138 Sum_probs=182.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCC-HHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKN-SRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~-~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|+++.|...... ..+++... ...+++++.+|++++ +.+..+
T Consensus 25 ~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~-----------------~~~~v~~v~~Dl~d~------~~l~~~ 79 (699)
T 1z45_A 25 SHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVL-----------------TKHHIPFYEVDLCDR------KGLEKV 79 (699)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHH-----------------HTSCCCEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEECCCcchHHHHHHHhhc-----------------cCCceEEEEcCCCCH------HHHHHH
Confidence 3789999998 899999999754332 12222211 124788999999986 678888
Q ss_pred hc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC------cccccccCCC
Q psy7539 80 SE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE------KVLEEKTYPP 148 (318)
Q Consensus 80 ~~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~------~~~~E~~~~~ 148 (318)
++ ++|+|||+||..... ....+.+++|+.|+.+++++|++. ++++|||+||.++++.. .+++|..+..
T Consensus 80 ~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~ 158 (699)
T 1z45_A 80 FKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFPNMIPIPEECPLG 158 (699)
T ss_dssp HHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC
T ss_pred HHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECcHHHhCCCccccccCCccccCCCC
Confidence 87 899999999986532 234568999999999999999985 88999999999888753 2455544433
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCCCcccC
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLPGWTDN 225 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~g~~~~ 225 (318)
|. +.|+.||+++|+++..+.. .+++++++||+++||....+..|....
T Consensus 159 p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~ 209 (699)
T 1z45_A 159 PT-----------------------------NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPL 209 (699)
T ss_dssp CC-----------------------------SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCS
T ss_pred CC-----------------------------ChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccc
Confidence 33 8999999999999988754 489999999999999764432221100
Q ss_pred --CCchHHHHHHHhcC--ceeeEec------CCCcccCcchHHHHHHHHHHHhhhccC--CCCCCCcEEEeeCCCCCcee
Q psy7539 226 --INGPTGLLIGAGKG--IIRTMYC------DYSTCADFLPVDVLVNGVLLSTWNFLS--NPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 226 --~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~v~v~Dva~~~~~~~~~~~~--~~~~~~~~~ni~~~~~~~~~ 293 (318)
......++.....+ ....+++ ++.+.++|+||+|+|++++.++..... .....+++||++++ .+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~--~~~s 287 (699)
T 1z45_A 210 GIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG--KGST 287 (699)
T ss_dssp SSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS--CCEE
T ss_pred cchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCC--CCCc
Confidence 01122344444433 2223334 678899999999999999999875321 00012479999998 8999
Q ss_pred HHHHHHHHHHhhcccCCC
Q psy7539 294 WYDIIENGKDIARNKVPL 311 (318)
Q Consensus 294 ~~el~~~i~~~~~~~~p~ 311 (318)
+.|+++.+++.+|.+.|.
T Consensus 288 ~~el~~~i~~~~g~~~~~ 305 (699)
T 1z45_A 288 VFEVYHAFCKASGIDLPY 305 (699)
T ss_dssp HHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHHHhCCCCCc
Confidence 999999999999776554
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=197.38 Aligned_cols=217 Identities=18% Similarity=0.126 Sum_probs=169.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+ + |++|+++.|+.. ++.+|++++ +.+..++
T Consensus 14 ~~l~~~L~-~--g~~V~~~~r~~~----------------------------------~~~~D~~d~------~~~~~~~ 50 (299)
T 1n2s_A 14 WELQRSLA-P--VGNLIALDVHSK----------------------------------EFCGDFSNP------KGVAETV 50 (299)
T ss_dssp HHHHHHTT-T--TSEEEEECTTCS----------------------------------SSCCCTTCH------HHHHHHH
T ss_pred HHHHHHhh-c--CCeEEEeccccc----------------------------------cccccCCCH------HHHHHHH
Confidence 37888998 7 899999999531 247898876 6788887
Q ss_pred cC--ccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChh
Q psy7539 81 ET--IHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~ 153 (318)
++ +|+|||+||.... ...+...+++|+.|+.+++++|++. ++ +|||+||.++|+... +++|+.+..|.
T Consensus 51 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~--- 125 (299)
T 1n2s_A 51 RKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFPGTGDIPWQETDATSPL--- 125 (299)
T ss_dssp HHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS---
T ss_pred HhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEeCCCCCCCCCCCCCCCc---
Confidence 75 9999999997653 2456678999999999999999985 66 799999999887643 67776655554
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
+.|+.+|+++|+++..+. .+++++||+++||+... + -...++
T Consensus 126 --------------------------~~Y~~sK~~~E~~~~~~~---~~~~ilRp~~v~G~~~~-------~--~~~~~~ 167 (299)
T 1n2s_A 126 --------------------------NVYGKTKLAGEKALQDNC---PKHLIFRTSWVYAGKGN-------N--FAKTML 167 (299)
T ss_dssp --------------------------SHHHHHHHHHHHHHHHHC---SSEEEEEECSEECSSSC-------C--HHHHHH
T ss_pred --------------------------cHHHHHHHHHHHHHHHhC---CCeEEEeeeeecCCCcC-------c--HHHHHH
Confidence 899999999999999884 48999999999996432 1 123455
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
.....+......+ ++.++|+|++|+|++++.++.++... ...+++||++++ .++++.|+++.+.+.+|.+
T Consensus 168 ~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~-~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 237 (299)
T 1n2s_A 168 RLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNK-PEVAGLYHLVAG--GTTTWHDYAALVFDEARKA 237 (299)
T ss_dssp HHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHC-GGGCEEEECCCB--SCEEHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccc-cccCceEEEeCC--CCCCHHHHHHHHHHHhCCC
Confidence 5555665444443 48899999999999999999876210 001689999998 8999999999999998765
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-26 Score=192.73 Aligned_cols=207 Identities=11% Similarity=-0.025 Sum_probs=154.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+.. .....+++++.+|++++ +++..++
T Consensus 18 ~~l~~~L~~~--g~~V~~~~r~~~~~------------------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 65 (227)
T 3dhn_A 18 SALLNEALNR--GFEVTAVVRHPEKI------------------------KIENEHLKVKKADVSSL------DEVCEVC 65 (227)
T ss_dssp HHHHHHHHTT--TCEEEEECSCGGGC------------------------CCCCTTEEEECCCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEEcCcccc------------------------hhccCceEEEEecCCCH------HHHHHHh
Confidence 3789999998 89999999975432 22236899999999976 6899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC-cccccccCCCCCChhHHHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE-KVLEEKTYPPPVSPHNVIEKA 159 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~-~~~~E~~~~~p~~~~~~~~~~ 159 (318)
+++|+|||+|+.... ...++++|+.++.+++++|++. ++++|||+||.+++... ....|+.+..|.
T Consensus 66 ~~~d~vi~~a~~~~~---~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~--------- 132 (227)
T 3dhn_A 66 KGADAVISAFNPGWN---NPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPGLRLMDSGEVPE--------- 132 (227)
T ss_dssp TTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETTEEGGGTTCSCG---------
T ss_pred cCCCEEEEeCcCCCC---ChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCCCccccCCcchH---------
Confidence 999999999987521 1237888999999999999995 89999999998765442 233333333332
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhc
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGK 238 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (318)
+.|+.+|+++|.++..+.+ .+++++++||+.+||+.... +.+. .
T Consensus 133 --------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~------~~~~---------~ 177 (227)
T 3dhn_A 133 --------------------NILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT------GRYR---------L 177 (227)
T ss_dssp --------------------GGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCC------CCCE---------E
T ss_pred --------------------HHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccc------ccee---------e
Confidence 8999999999999999885 79999999999999975432 1111 1
Q ss_pred CceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHH
Q psy7539 239 GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 295 (318)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~ 295 (318)
+....+. .+. .++|+|++|+|++++.+++++.. .+++|+++++ ++.++.
T Consensus 178 ~~~~~~~-~~~-~~~~i~~~Dva~ai~~~l~~~~~----~g~~~~~~~~--~~~~~~ 226 (227)
T 3dhn_A 178 GKDDMIV-DIV-GNSHISVEDYAAAMIDELEHPKH----HQERFTIGYL--EHHHHH 226 (227)
T ss_dssp ESSBCCC-CTT-SCCEEEHHHHHHHHHHHHHSCCC----CSEEEEEECC--SCCC--
T ss_pred cCCCccc-CCC-CCcEEeHHHHHHHHHHHHhCccc----cCcEEEEEee--hhcccC
Confidence 1111111 222 28999999999999999999876 3899999999 787765
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-25 Score=194.89 Aligned_cols=208 Identities=15% Similarity=0.073 Sum_probs=164.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|. .+|++++ +.+..++
T Consensus 26 ~~l~~~L~~~--g~~V~~~~r~--------------------------------------~~Dl~d~------~~~~~~~ 59 (292)
T 1vl0_A 26 REIQKQLKGK--NVEVIPTDVQ--------------------------------------DLDITNV------LAVNKFF 59 (292)
T ss_dssp HHHHHHHTTS--SEEEEEECTT--------------------------------------TCCTTCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCeEEeccCc--------------------------------------cCCCCCH------HHHHHHH
Confidence 3678888877 7888888872 3677765 5788877
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChh
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~ 153 (318)
+ ++|+|||+||..... ..+...+++|+.|+.+++++|.+. ++ +|||+||.++++... +++|+.+..|.
T Consensus 60 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~--- 134 (292)
T 1vl0_A 60 NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVFDGEAKEPITEFDEVNPQ--- 134 (292)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC---
T ss_pred HhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeECCCCCCCCCCCCCCCCc---
Confidence 7 899999999986532 345678999999999999999986 66 999999998887633 67776655544
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
+.|+.+|+++|+++..+. .+++++||+.+||+ .. + ....++
T Consensus 135 --------------------------~~Y~~sK~~~E~~~~~~~---~~~~~lR~~~v~G~-~~-------~--~~~~~~ 175 (292)
T 1vl0_A 135 --------------------------SAYGKTKLEGENFVKALN---PKYYIVRTAWLYGD-GN-------N--FVKTMI 175 (292)
T ss_dssp --------------------------SHHHHHHHHHHHHHHHHC---SSEEEEEECSEESS-SS-------C--HHHHHH
T ss_pred --------------------------cHHHHHHHHHHHHHHhhC---CCeEEEeeeeeeCC-Cc-------C--hHHHHH
Confidence 899999999999999874 47999999999996 21 1 122344
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
.....+......+ ++.++++|++|+|++++.++.++ . +++||++++ .++++.|+++.+.+.+|.+
T Consensus 176 ~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~-~-----~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 240 (292)
T 1vl0_A 176 NLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK-N-----YGTFHCTCK--GICSWYDFAVEIFRLTGID 240 (292)
T ss_dssp HHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT-C-----CEEEECCCB--SCEEHHHHHHHHHHHHCCC
T ss_pred HHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC-C-----CcEEEecCC--CCccHHHHHHHHHHHhCCC
Confidence 5555554433443 57899999999999999999886 3 789999998 8999999999999999754
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=198.65 Aligned_cols=225 Identities=16% Similarity=0.084 Sum_probs=148.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+. ++ ++.+|++++ +.+..++
T Consensus 16 ~~l~~~L~~~--g~~V~~~~r~~~~-----------------------------~~--~~~~Dl~d~------~~~~~~~ 56 (315)
T 2ydy_A 16 RAVHKEFQQN--NWHAVGCGFRRAR-----------------------------PK--FEQVNLLDS------NAVHHII 56 (315)
T ss_dssp HHHHHHHHTT--TCEEEEEC-------------------------------------------------------CHHHH
T ss_pred HHHHHHHHhC--CCeEEEEccCCCC-----------------------------CC--eEEecCCCH------HHHHHHH
Confidence 4789999988 8999999985321 12 578999876 4566766
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC-cccccccCCCCCChhH
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE-KVLEEKTYPPPVSPHN 154 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~-~~~~E~~~~~p~~~~~ 154 (318)
+ ++|+|||+||..... ..+...+++|+.|+.+++++|.+. ++ +|||+||.++++.. .+++|+.+..|.
T Consensus 57 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~---- 130 (315)
T 2ydy_A 57 HDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVFDGTNPPYREEDIPAPL---- 130 (315)
T ss_dssp HHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSSSCSBCTTSCCCCC----
T ss_pred HhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHcCCCCCCCCCCCCCCCc----
Confidence 6 599999999976432 345678999999999999999985 65 99999999888763 367776655544
Q ss_pred HHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHH
Q psy7539 155 VIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLI 234 (318)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~ 234 (318)
+.|+.+|.++|+++..+ +++++++||+.+||....+..+ +. ..++.
T Consensus 131 -------------------------~~Y~~sK~~~e~~~~~~---~~~~~~lR~~~v~G~~~~~~~~----~~--~~~~~ 176 (315)
T 2ydy_A 131 -------------------------NLYGKTKLDGEKAVLEN---NLGAAVLRIPILYGEVEKLEES----AV--TVMFD 176 (315)
T ss_dssp -------------------------SHHHHHHHHHHHHHHHH---CTTCEEEEECSEECSCSSGGGS----TT--GGGHH
T ss_pred -------------------------CHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCccccc----HH--HHHHH
Confidence 89999999999999987 5688999999999976532111 11 12334
Q ss_pred HHh-cCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 235 GAG-KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 235 ~~~-~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
... .+....+ .+.+.++++|++|+|++++.++.+.... ...+++||++++ .++++.|+++.+.+.+|.+.
T Consensus 177 ~~~~~~~~~~~--~~~~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (315)
T 2ydy_A 177 KVQFSNKSANM--DHWQQRFPTHVKDVATVCRQLAEKRMLD-PSIKGTFHWSGN--EQMTKYEMACAIADAFNLPS 247 (315)
T ss_dssp HHHCCSSCEEE--ECSSBBCCEEHHHHHHHHHHHHHHHHTC-TTCCEEEECCCS--CCBCHHHHHHHHHHHTTCCC
T ss_pred HHHhcCCCeee--ccCceECcEEHHHHHHHHHHHHHhhccc-cCCCCeEEEcCC--CcccHHHHHHHHHHHhCCCh
Confidence 444 4443333 3568899999999999999998875100 013789999998 89999999999999997653
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=195.46 Aligned_cols=223 Identities=15% Similarity=0.156 Sum_probs=169.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|....... .+ .. ..+++++.+|++++ +.+..++
T Consensus 35 ~~l~~~L~~~--g~~V~~~~r~~~~~~~--~l------------------~~-~~~~~~~~~Dl~d~------~~~~~~~ 85 (333)
T 2q1w_A 35 SHIAELLLER--GDKVVGIDNFATGRRE--HL------------------KD-HPNLTFVEGSIADH------ALVNQLI 85 (333)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSSCCGG--GS------------------CC-CTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCCccchh--hH------------------hh-cCCceEEEEeCCCH------HHHHHHH
Confidence 3789999998 8999999997543210 00 11 14789999999986 6788888
Q ss_pred cC--ccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecccccc----CCc-ccccccCCCCCC
Q psy7539 81 ET--IHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHP----KEK-VLEEKTYPPPVS 151 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~----~~~-~~~E~~~~~p~~ 151 (318)
++ +|+|||+||..... ... . +++|+.|+.+++++|.+. ++++|||+||.++++ ... +++|+. .|.
T Consensus 86 ~~~~~D~vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~g~~~~~~~~~~~E~~--~p~- 159 (333)
T 2q1w_A 86 GDLQPDAVVHTAASYKDPDDWYN-D-TLTNCVGGSNVVQAAKKN-NVGRFVYFQTALCYGVKPIQQPVRLDHPR--NPA- 159 (333)
T ss_dssp HHHCCSEEEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGCSCCCSSSBCTTSCC--CCT-
T ss_pred hccCCcEEEECceecCCCccCCh-H-HHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCcccCCCCcCCCC--CCC-
Confidence 87 99999999986542 223 3 899999999999999985 889999999998886 321 444433 111
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHH-hhhcCCcEEEecccccccccCCCCCCcccCCCchH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTE-YMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPT 230 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~-~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~ 230 (318)
.+.|+.+|+++|+++.. +. +++++||+++||+... . ....
T Consensus 160 ---------------------------~~~Y~~sK~~~E~~~~~s~~----~~~ilR~~~v~gp~~~-------~-~~~~ 200 (333)
T 2q1w_A 160 ---------------------------NSSYAISKSANEDYLEYSGL----DFVTFRLANVVGPRNV-------S-GPLP 200 (333)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHTC----CEEEEEESEEESTTCC-------S-SHHH
T ss_pred ---------------------------CCchHHHHHHHHHHHHhhhC----CeEEEeeceEECcCCc-------C-cHHH
Confidence 06899999999999988 63 8999999999996521 0 1123
Q ss_pred HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 231 GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
.++.....+. .+++ +.+.++++|++|+|++++.++.++. +++||++++ .++++.|+++.+.+.+|.+
T Consensus 201 ~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~------g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 201 IFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG------HGAYHFSSG--TDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp HHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC------CEEEECSCS--CCEEHHHHHHHHHHHTTCS
T ss_pred HHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC------CCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 3555555654 3344 6788999999999999999997643 589999998 8999999999999999765
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-25 Score=197.69 Aligned_cols=244 Identities=17% Similarity=0.179 Sum_probs=159.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEc-cCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLR-PKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R-~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|++++| +.......+.+.++ .....+++++.+|++++ +.+..+
T Consensus 15 ~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~Dl~d~------~~~~~~ 71 (322)
T 2p4h_X 15 SWIIKSLLEN--GYSVNTTIRADPERKRDVSFLTNL---------------PGASEKLHFFNADLSNP------DSFAAA 71 (322)
T ss_dssp HHHHHHHHHT--TCEEEEECCCC----CCCHHHHTS---------------TTHHHHEEECCCCTTCG------GGGHHH
T ss_pred HHHHHHHHHC--CCEEEEEEeCCccchhHHHHHHhh---------------hccCCceEEEecCCCCH------HHHHHH
Confidence 4789999998 999999998 43211100111100 11123688999999987 578888
Q ss_pred hcCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccC-C---cccccccCCCCCChh
Q psy7539 80 SETIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK-E---KVLEEKTYPPPVSPH 153 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~-~---~~~~E~~~~~p~~~~ 153 (318)
++++|+|||+|+..... .+...++++|+.|+.+++++|.+..++++|||+||.+++.. . .+++|.....+ .
T Consensus 72 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~---~ 148 (322)
T 2p4h_X 72 IEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDV---D 148 (322)
T ss_dssp HTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCH---H
T ss_pred HcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccch---h
Confidence 99999999999865322 12335899999999999999998436899999999775322 1 13444321110 0
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCC-chhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPN-GYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
. ..+. .+.+ .|+.||+++|+++..+.+ +|++++++||+++||+...+ .+.....
T Consensus 149 ------------~---~~~~---~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~------~~~~~~~ 204 (322)
T 2p4h_X 149 ------------L---LRSV---KPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCP------KLPDSIE 204 (322)
T ss_dssp ------------H---HHHH---CCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSS------SCCHHHH
T ss_pred ------------h---hccc---CcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCC------CCCchHH
Confidence 0 0000 0012 699999999999998876 79999999999999975432 1111111
Q ss_pred HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 232 LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
.+.....|....+ +. ..++|+|++|+|++++.++.++.. .+.|| +++ .++++.|+++.+.+.+
T Consensus 205 ~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~~~~-----~g~~~-~~~--~~~s~~e~~~~i~~~~ 267 (322)
T 2p4h_X 205 KALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLLENSVP-----GGRYN-CSP--FIVPIEEMSQLLSAKY 267 (322)
T ss_dssp HHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHHHSCCC-----CEEEE-CCC--EEEEHHHHHHHHHHHC
T ss_pred HHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHhhCcCC-----CCCEE-EcC--CCCCHHHHHHHHHHhC
Confidence 1222233322111 12 334899999999999999976443 34599 455 6899999999998877
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=201.95 Aligned_cols=247 Identities=13% Similarity=0.124 Sum_probs=162.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+.......+..+ . ...+++++.+|++++ +.+..++
T Consensus 23 ~~l~~~Ll~~--G~~V~~~~r~~~~~~~~~~~~~~---------------~-~~~~~~~~~~Dl~d~------~~~~~~~ 78 (338)
T 2rh8_A 23 SLLVKLLLQK--GYAVNTTVRDPDNQKKVSHLLEL---------------Q-ELGDLKIFRADLTDE------LSFEAPI 78 (338)
T ss_dssp HHHHHHHHHT--TCEEEEEESCTTCTTTTHHHHHH---------------G-GGSCEEEEECCTTTS------SSSHHHH
T ss_pred HHHHHHHHHC--CCEEEEEEcCcchhhhHHHHHhc---------------C-CCCcEEEEecCCCCh------HHHHHHH
Confidence 4799999998 99999999975432211111111 1 124788999999987 3677888
Q ss_pred cCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecccc-ccC---C--cccccccCCCCCCh
Q psy7539 81 ETIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYC-HPK---E--KVLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~-~~~---~--~~~~E~~~~~p~~~ 152 (318)
+++|+|||+||..... .+..+++++|+.||.+++++|.+..++++|||+||..+ ++. . .+++|+....+...
T Consensus 79 ~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~ 158 (338)
T 2rh8_A 79 AGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFL 158 (338)
T ss_dssp TTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC---
T ss_pred cCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhc
Confidence 9999999999976432 22234889999999999999998534899999999763 221 1 14556432221100
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
. + .......|+.||.++|+++..+.+ +|++++++||++|||+...+. +.....
T Consensus 159 ~------------------~--~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~------~~~~~~ 212 (338)
T 2rh8_A 159 T------------------S--AKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSD------VPSSIG 212 (338)
T ss_dssp ------------------------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSS------CCHHHH
T ss_pred c------------------c--cCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC------CCchHH
Confidence 0 0 000002699999999999998876 699999999999999754321 111111
Q ss_pred HHHHHhcCceeeEecC------CCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 232 LLIGAGKGIIRTMYCD------YSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~------~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
.+.....|... ..+. +.+.++|+|++|+|++++.+++++.. .+.||++++ .+++.|+++.+.+.+
T Consensus 213 ~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~-----~~~~~~~~~---~~s~~e~~~~l~~~~ 283 (338)
T 2rh8_A 213 LAMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESA-----SGRYICCAA---NTSVPELAKFLSKRY 283 (338)
T ss_dssp HHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTC-----CEEEEECSE---EECHHHHHHHHHHHC
T ss_pred HHHHHHcCCcc-ccccccccccccCcccEEEHHHHHHHHHHHHcCCCc-----CCcEEEecC---CCCHHHHHHHHHHhC
Confidence 22222333211 1111 11234899999999999999976543 467888765 689999999999887
Q ss_pred c
Q psy7539 306 R 306 (318)
Q Consensus 306 ~ 306 (318)
+
T Consensus 284 ~ 284 (338)
T 2rh8_A 284 P 284 (338)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=198.20 Aligned_cols=246 Identities=13% Similarity=0.130 Sum_probs=162.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+.. +++.....- .....+++++.+|++++ +.+..++
T Consensus 19 ~~l~~~L~~~--G~~V~~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~~~~Dl~d~------~~~~~~~ 75 (337)
T 2c29_D 19 SWLVMRLLER--GYTVRATVRDPTNV---KKVKHLLDL------------PKAETHLTLWKADLADE------GSFDEAI 75 (337)
T ss_dssp HHHHHHHHHT--TCEEEEEESCTTCH---HHHHHHHTS------------TTHHHHEEEEECCTTST------TTTHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCcchh---HHHHHHHhc------------ccCCCeEEEEEcCCCCH------HHHHHHH
Confidence 4789999998 99999999964321 112111100 11123688999999987 4678888
Q ss_pred cCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccc-cCC---cccccccCCCCCChhH
Q psy7539 81 ETIHIVYHIAATVRFD--DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCH-PKE---KVLEEKTYPPPVSPHN 154 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~-~~~---~~~~E~~~~~p~~~~~ 154 (318)
+++|+|||+|+..... .+...++++|+.||.+++++|.+...+++|||+||.+++ +.. ...+|+.... . ..
T Consensus 76 ~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~-~--~~ 152 (337)
T 2c29_D 76 KGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSD-M--EF 152 (337)
T ss_dssp TTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCC-H--HH
T ss_pred cCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCc-h--hh
Confidence 9999999999976432 233468999999999999999986338999999997643 321 1345542211 0 00
Q ss_pred HHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 155 VIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
.. + .....+.|+.||.++|+++..+.+ +|++++++||++|||+...+ .+.......
T Consensus 153 ------------~~---~--~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~------~~~~~~~~~ 209 (337)
T 2c29_D 153 ------------CR---A--KKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMS------SMPPSLITA 209 (337)
T ss_dssp ------------HH---H--HCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCS------SCCHHHHHH
T ss_pred ------------hc---c--cCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC------CCCchHHHH
Confidence 00 0 000115799999999999988876 79999999999999975432 111111111
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
.....|... ....+. ...|+|++|+|++++.+++++.. .+.|+++++ .+++.|+++.+.+.+
T Consensus 210 ~~~~~g~~~-~~~~~~-~~~~i~v~Dva~a~~~~~~~~~~-----~~~~~~~~~---~~s~~e~~~~i~~~~ 271 (337)
T 2c29_D 210 LSPITGNEA-HYSIIR-QGQFVHLDDLCNAHIYLFENPKA-----EGRYICSSH---DCIILDLAKMLREKY 271 (337)
T ss_dssp THHHHTCGG-GHHHHT-EEEEEEHHHHHHHHHHHHHCTTC-----CEEEEECCE---EEEHHHHHHHHHHHC
T ss_pred HHHHcCCCc-cccccC-CCCEEEHHHHHHHHHHHhcCccc-----CceEEEeCC---CCCHHHHHHHHHHHC
Confidence 111222211 111111 23499999999999999976543 457877655 689999999999877
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.3e-25 Score=198.37 Aligned_cols=234 Identities=15% Similarity=0.104 Sum_probs=173.8
Q ss_pred ChhHHHHHhhCCC-----cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHH
Q psy7539 1 KVLLEKILRTCEN-----VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAED 75 (318)
Q Consensus 1 ~~l~~~Ll~~~~~-----~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~ 75 (318)
++|+++|+++ | ++|++++|+.+... ....+++++.+|++++ +.
T Consensus 15 ~~l~~~L~~~--g~~~~~~~V~~~~r~~~~~~------------------------~~~~~~~~~~~Dl~d~------~~ 62 (364)
T 2v6g_A 15 NSLAEILPLA--DTPGGPWKVYGVARRTRPAW------------------------HEDNPINYVQCDISDP------DD 62 (364)
T ss_dssp HHHHHHTTST--TCTTCSEEEEEEESSCCCSC------------------------CCSSCCEEEECCTTSH------HH
T ss_pred HHHHHHHHhC--CCCCCceEEEEEeCCCCccc------------------------cccCceEEEEeecCCH------HH
Confidence 3788999988 7 89999999755431 0124788999999876 67
Q ss_pred HHHHhcC---ccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc-CCCccEE-------EEeccccccCC----cc
Q psy7539 76 RQMLSET---IHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFV-------YVSTAYCHPKE----KV 140 (318)
Q Consensus 76 ~~~~~~~---~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v-------~~SS~~~~~~~----~~ 140 (318)
+..++++ +|+|||+||... .+....+++|+.|+.+++++|.+. +++++|| |+||.++|+.. .+
T Consensus 63 ~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~ 140 (364)
T 2v6g_A 63 SQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPP 140 (364)
T ss_dssp HHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSS
T ss_pred HHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCC
Confidence 8888887 999999999764 345678999999999999999984 2688998 79998888763 25
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cC-CcEEEecccccccccCCC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AG-MPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~-~~~~ilR~~~v~G~~~~~ 218 (318)
++|+.+..|. .+.| +.+|+++..+.+ .+ ++++++||+++||+....
T Consensus 141 ~~E~~~~~~~----------------------------~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~ 188 (364)
T 2v6g_A 141 YTEDLPRLKY----------------------------MNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYS 188 (364)
T ss_dssp BCTTSCCCSS----------------------------CCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTC
T ss_pred CCccccCCcc----------------------------chhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCc
Confidence 6665443321 1677 568999988876 66 999999999999976532
Q ss_pred CCCcccCCCchHHHHHHH--hcCceeeEecCC---CcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 219 LPGWTDNINGPTGLLIGA--GKGIIRTMYCDY---STCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
.. +...+..++..+ ..|....+++++ ....+++|++|+|++++.+++++.. .+++||++++ .++|
T Consensus 189 ~~----~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~----~g~~~ni~~~--~~~s 258 (364)
T 2v6g_A 189 MM----NLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYA----KNEAFNVSNG--DVFK 258 (364)
T ss_dssp SS----CHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGG----TTEEEEECCS--CCBC
T ss_pred cc----chHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCC----CCceEEecCC--CcCC
Confidence 11 100111123333 245444456666 4558889999999999999987653 2679999998 7899
Q ss_pred HHHHHHHHHHhhcccCC
Q psy7539 294 WYDIIENGKDIARNKVP 310 (318)
Q Consensus 294 ~~el~~~i~~~~~~~~p 310 (318)
+.|+++.+.+.+|.+.+
T Consensus 259 ~~e~~~~i~~~~g~~~~ 275 (364)
T 2v6g_A 259 WKHFWKVLAEQFGVECG 275 (364)
T ss_dssp HHHHHHHHHHHHTCCBC
T ss_pred HHHHHHHHHHHhCCCCC
Confidence 99999999999976543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.4e-24 Score=190.35 Aligned_cols=219 Identities=16% Similarity=0.097 Sum_probs=168.5
Q ss_pred ChhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ +|+ +|+++.|+.. ..+.+.+.+ ...+++++.+|++++ +.+..+
T Consensus 35 ~~l~~~L~~~-~g~~~V~~~~r~~~---~~~~~~~~~----------------~~~~v~~~~~Dl~d~------~~l~~~ 88 (344)
T 2gn4_A 35 KCFVRKVLDT-TNAKKIIVYSRDEL---KQSEMAMEF----------------NDPRMRFFIGDVRDL------ERLNYA 88 (344)
T ss_dssp HHHHHHHHHH-CCCSEEEEEESCHH---HHHHHHHHH----------------CCTTEEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHhh-CCCCEEEEEECChh---hHHHHHHHh----------------cCCCEEEEECCCCCH------HHHHHH
Confidence 3688999887 577 9999999532 111222111 124799999999986 688889
Q ss_pred hcCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHH
Q psy7539 80 SETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVI 156 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~ 156 (318)
++++|+|||+||..... ..+.+.+++|+.|+.+++++|.+. ++++||++||..++. |.
T Consensus 89 ~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS~~~~~------------p~------ 149 (344)
T 2gn4_A 89 LEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALSTDKAAN------------PI------ 149 (344)
T ss_dssp TTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSS------------CC------
T ss_pred HhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCccCC------------Cc------
Confidence 99999999999976422 334578999999999999999996 899999999976532 11
Q ss_pred HHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 157 EKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
+.|+.||+++|+++..+.. .|++++++||++|+|+... -...+
T Consensus 150 -----------------------~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~----------~i~~~ 196 (344)
T 2gn4_A 150 -----------------------NLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS----------VVPFF 196 (344)
T ss_dssp -----------------------SHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS----------HHHHH
T ss_pred -----------------------cHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC----------HHHHH
Confidence 8999999999999998874 4799999999999995421 11234
Q ss_pred HHHHhcCc-eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 233 LIGAGKGI-IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 233 ~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
+.....|. ...+ .++...++|+|++|+|++++.++.+... +++||+.++ ++++.|+++.+.+.++
T Consensus 197 ~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a~~v~~~l~~~~~-----g~~~~~~~~---~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 197 KKLVQNKASEIPI-TDIRMTRFWITLDEGVSFVLKSLKRMHG-----GEIFVPKIP---SMKMTDLAKALAPNTP 262 (344)
T ss_dssp HHHHHHTCCCEEE-SCTTCEEEEECHHHHHHHHHHHHHHCCS-----SCEEEECCC---EEEHHHHHHHHCTTCC
T ss_pred HHHHHcCCCceEE-eCCCeEEeeEEHHHHHHHHHHHHhhccC-----CCEEecCCC---cEEHHHHHHHHHHhCC
Confidence 45555565 3333 4778889999999999999999988643 679998777 6999999999987653
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.4e-24 Score=188.08 Aligned_cols=217 Identities=9% Similarity=-0.003 Sum_probs=159.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|++... . +..| +.....+
T Consensus 14 ~~L~~~L~~~--G~~V~~l~R~~~~~-----------------------------~---~~~~----------~~~~~~l 49 (298)
T 4b4o_A 14 TALTQLLNAR--GHEVTLVSRKPGPG-----------------------------R---ITWD----------ELAASGL 49 (298)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCCTT-----------------------------E---EEHH----------HHHHHCC
T ss_pred HHHHHHHHHC--CCEEEEEECCCCcC-----------------------------e---eecc----------hhhHhhc
Confidence 4799999999 99999999964321 1 1112 1233445
Q ss_pred cCccEEEEccccc--C----cc-hhHHHHHHHhHHHHHHHHHHHHhcC-CCccEEEEeccccccCCc--ccccccCCCCC
Q psy7539 81 ETIHIVYHIAATV--R----FD-DYMQTYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTAYCHPKEK--VLEEKTYPPPV 150 (318)
Q Consensus 81 ~~~d~Vih~Aa~~--~----~~-~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~ 150 (318)
+++|+|||+|+.. . +. .....+++.|+.+|.+|++++...+ ..+.||++||.++|+... ..+|+.+..|.
T Consensus 50 ~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~ 129 (298)
T 4b4o_A 50 PSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF 129 (298)
T ss_dssp CSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS
T ss_pred cCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCcccc
Confidence 7899999999853 1 11 2234688999999999999998752 234588999999988743 67776655543
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCch-
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGP- 229 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~- 229 (318)
+.|+..|...|...... ..+++++++|++.|||+.. +.
T Consensus 130 -----------------------------~~~~~~~~~~e~~~~~~-~~~~~~~~~r~~~v~g~~~-----------~~~ 168 (298)
T 4b4o_A 130 -----------------------------DFFSNLVTKWEAAARLP-GDSTRQVVVRSGVVLGRGG-----------GAM 168 (298)
T ss_dssp -----------------------------SHHHHHHHHHHHHHCCS-SSSSEEEEEEECEEECTTS-----------HHH
T ss_pred -----------------------------chhHHHHHHHHHHHHhh-ccCCceeeeeeeeEEcCCC-----------Cch
Confidence 67777777777654322 2589999999999999542 22
Q ss_pred HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 230 TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
..++.....+. ....+++++.++||||+|+|++++.+++++.. .++||++++ +++|++|+++.+++.+|.+.
T Consensus 169 ~~~~~~~~~~~-~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-----~g~yn~~~~--~~~t~~e~~~~ia~~lgrp~ 240 (298)
T 4b4o_A 169 GHMLLPFRLGL-GGPIGSGHQFFPWIHIGDLAGILTHALEANHV-----HGVLNGVAP--SSATNAEFAQTFGAALGRRA 240 (298)
T ss_dssp HHHHHHHHTTC-CCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC-----CEEEEESCS--CCCBHHHHHHHHHHHHTCCC
T ss_pred hHHHHHHhcCC-cceecccCceeecCcHHHHHHHHHHHHhCCCC-----CCeEEEECC--CccCHHHHHHHHHHHhCcCC
Confidence 22333333343 34568999999999999999999999998765 679999999 89999999999999997554
Q ss_pred C
Q psy7539 310 P 310 (318)
Q Consensus 310 p 310 (318)
+
T Consensus 241 ~ 241 (298)
T 4b4o_A 241 F 241 (298)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=206.64 Aligned_cols=219 Identities=14% Similarity=0.054 Sum_probs=161.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|++++|+.+.. ..+.+|+.+. +...+
T Consensus 161 ~~l~~~L~~~--G~~V~~l~R~~~~~-------------------------------~~v~~d~~~~--------~~~~l 199 (516)
T 3oh8_A 161 RALTAQLQTG--GHEVIQLVRKEPKP-------------------------------GKRFWDPLNP--------ASDLL 199 (516)
T ss_dssp HHHHHHHHHT--TCEEEEEESSSCCT-------------------------------TCEECCTTSC--------CTTTT
T ss_pred HHHHHHHHHC--CCEEEEEECCCCCc-------------------------------cceeecccch--------hHHhc
Confidence 3789999998 99999999975432 1256777653 24456
Q ss_pred cCccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHH-HHhcCCCccEEEEeccccccC-C--cccccccCCCCCCh
Q psy7539 81 ETIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNL-SKQMIHLQLFVYVSTAYCHPK-E--KVLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~-a~~~~~~~~~v~~SS~~~~~~-~--~~~~E~~~~~p~~~ 152 (318)
+++|+|||+||.... ......++++|+.|+.+|+++ |.+ .++++|||+||.++|+. . .+++|..+. |.
T Consensus 200 ~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~-~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~-- 275 (516)
T 3oh8_A 200 DGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAES-TQCTTMISASAVGFYGHDRGDEILTEESES-GD-- 275 (516)
T ss_dssp TTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHC-SSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CS--
T ss_pred CCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCcceEecCCCCCCccCCCCCC-Cc--
Confidence 799999999998532 244567899999999999999 555 58899999999999883 2 256675543 32
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
+.|+.+|...|+++......|++++++||+++||+.. +....
T Consensus 276 ---------------------------~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~-----------~~~~~ 317 (516)
T 3oh8_A 276 ---------------------------DFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRG-----------GMLPL 317 (516)
T ss_dssp ---------------------------SHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB-----------SHHHH
T ss_pred ---------------------------ChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC-----------ChHHH
Confidence 8899999999988766555799999999999999541 22222
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
+............+++.+.++|+|++|+|++++.++.++.. .+.||++++ .++++.|+++.+.+.+|.+.
T Consensus 318 ~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-----~g~~ni~~~--~~~s~~el~~~i~~~~g~~~ 387 (516)
T 3oh8_A 318 LKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-----SGPINAVAP--NPVSNADMTKILATSMHRPA 387 (516)
T ss_dssp HHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-----CEEEEESCS--CCEEHHHHHHHTTC------
T ss_pred HHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCccc-----CCcEEEECC--CCCCHHHHHHHHHHHhCCCC
Confidence 22222222224567889999999999999999999988664 579999999 89999999999999887654
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.92 E-value=6.1e-24 Score=186.48 Aligned_cols=207 Identities=15% Similarity=0.167 Sum_probs=159.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++.+|++|++++|+.+... .+ ...+++++.+|++++ +.+..++
T Consensus 14 ~~l~~~L~~~~~g~~V~~~~r~~~~~~---~l--------------------~~~~~~~~~~D~~d~------~~l~~~~ 64 (287)
T 2jl1_A 14 GLVIQHLLKKVPASQIIAIVRNVEKAS---TL--------------------ADQGVEVRHGDYNQP------ESLQKAF 64 (287)
T ss_dssp HHHHHHHTTTSCGGGEEEEESCTTTTH---HH--------------------HHTTCEEEECCTTCH------HHHHHHT
T ss_pred HHHHHHHHHhCCCCeEEEEEcCHHHHh---HH--------------------hhcCCeEEEeccCCH------HHHHHHH
Confidence 368888887534789999999754321 11 124688999999986 6899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|+|||+|+.. ... ++|+.++.+++++|++. ++++|||+||.+++..
T Consensus 65 ~~~d~vi~~a~~~-~~~------~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~----------------------- 113 (287)
T 2jl1_A 65 AGVSKLLFISGPH-YDN------TLLIVQHANVVKAARDA-GVKHIAYTGYAFAEES----------------------- 113 (287)
T ss_dssp TTCSEEEECCCCC-SCH------HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGGGC-----------------------
T ss_pred hcCCEEEEcCCCC-cCc------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCC-----------------------
Confidence 9999999999963 111 57999999999999985 8999999999876421
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHh-cC
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAG-KG 239 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~-~~ 239 (318)
+..|+.+|.++|+++... +++++++||+.++|.... .++.... .+
T Consensus 114 ------------------~~~y~~~K~~~E~~~~~~---~~~~~ilrp~~~~~~~~~-------------~~~~~~~~~~ 159 (287)
T 2jl1_A 114 ------------------IIPLAHVHLATEYAIRTT---NIPYTFLRNALYTDFFVN-------------EGLRASTESG 159 (287)
T ss_dssp ------------------CSTHHHHHHHHHHHHHHT---TCCEEEEEECCBHHHHSS-------------GGGHHHHHHT
T ss_pred ------------------CCchHHHHHHHHHHHHHc---CCCeEEEECCEeccccch-------------hhHHHHhhCC
Confidence 168999999999998753 899999999987764210 1112222 33
Q ss_pred ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 240 ~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
.. ....+++.++|+|++|+|++++.++.++.. .+++||++++ .++|+.|+++.+.+.+|.+.
T Consensus 160 ~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~----~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 221 (287)
T 2jl1_A 160 AI--VTNAGSGIVNSVTRNELALAAATVLTEEGH----ENKTYNLVSN--QPWTFDELAQILSEVSGKKV 221 (287)
T ss_dssp EE--EESCTTCCBCCBCHHHHHHHHHHHHTSSSC----TTEEEEECCS--SCBCHHHHHHHHHHHHSSCC
T ss_pred ce--eccCCCCccCccCHHHHHHHHHHHhcCCCC----CCcEEEecCC--CcCCHHHHHHHHHHHHCCcc
Confidence 32 245677889999999999999999987543 3789999998 89999999999999997653
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=198.00 Aligned_cols=189 Identities=15% Similarity=0.111 Sum_probs=152.3
Q ss_pred EEEeccC-CCCCCCCCHHHHHHHhcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCc-cEEEEeccccc
Q psy7539 58 IPINGDV-AVPDLGISAEDRQMLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQ-LFVYVSTAYCH 135 (318)
Q Consensus 58 ~~~~gDl-~~~~~gl~~~~~~~~~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~v~~SS~~~~ 135 (318)
+++.+|+ .+ ++.+..+++++|+|||+||..... ....+++.|+.++.+|+++|++. +++ +|||+||.+++
T Consensus 27 ~v~~~d~~~d------~~~l~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~ 98 (369)
T 3st7_A 27 HIFEVHRQTK------EEELESALLKADFIVHLAGVNRPE-HDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQAT 98 (369)
T ss_dssp EEEECCTTCC------HHHHHHHHHHCSEEEECCCSBCTT-CSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGG
T ss_pred EEEEECCCCC------HHHHHHHhccCCEEEECCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhc
Confidence 4555555 33 368888889999999999987643 33467888999999999999986 676 99999999886
Q ss_pred cCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccc
Q psy7539 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPI 214 (318)
Q Consensus 136 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~ 214 (318)
+. +.|+.+|+++|+++..+.+ .+++++++||+++||+
T Consensus 99 ~~------------------------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~ 136 (369)
T 3st7_A 99 QD------------------------------------------NPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGK 136 (369)
T ss_dssp SC------------------------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECT
T ss_pred CC------------------------------------------CCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCC
Confidence 52 8999999999999999887 7999999999999998
Q ss_pred cCCCCCCcccCCCch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 215 WKDPLPGWTDNINGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 215 ~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
...+. ..+. ..++.....+.... ..++++.++++|++|+|++++.++.++... .+++||++++ .++|
T Consensus 137 ~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~---~~~~~~i~~~--~~~s 204 (369)
T 3st7_A 137 WCKPN------YNSVIATFCYKIARNEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTPTI---ENGVPTVPNV--FKVT 204 (369)
T ss_dssp TCCTT------SSCHHHHHHHHHHTTCCCC-CSCTTCEEEEEEHHHHHHHHHHHHHTCCCE---ETTEECCSCC--EEEE
T ss_pred CCCCC------cchHHHHHHHHHHcCCCeE-ecCCCeEEEEEEHHHHHHHHHHHHhCCccc---CCceEEeCCC--Ccee
Confidence 66542 1122 34555566665433 357899999999999999999999886541 1689999998 8999
Q ss_pred HHHHHHHHHHhhccc
Q psy7539 294 WYDIIENGKDIARNK 308 (318)
Q Consensus 294 ~~el~~~i~~~~~~~ 308 (318)
+.|+++.+.+.+|.+
T Consensus 205 ~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 205 LGEIVDLLYKFKQSR 219 (369)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999998765
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=182.45 Aligned_cols=196 Identities=14% Similarity=0.179 Sum_probs=153.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCC-CCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV-PDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~-~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|+++.|+.+.. .. ..+++++.+|+++ + +++..+
T Consensus 14 ~~l~~~L~~~--g~~V~~~~R~~~~~------------------------~~-~~~~~~~~~D~~d~~------~~~~~~ 60 (219)
T 3dqp_A 14 KSLLKSLSTT--DYQIYAGARKVEQV------------------------PQ-YNNVKAVHFDVDWTP------EEMAKQ 60 (219)
T ss_dssp HHHHHHHTTS--SCEEEEEESSGGGS------------------------CC-CTTEEEEECCTTSCH------HHHHTT
T ss_pred HHHHHHHHHC--CCEEEEEECCccch------------------------hh-cCCceEEEecccCCH------HHHHHH
Confidence 3689999988 89999999974322 11 1589999999998 5 688999
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHH
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKA 159 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~ 159 (318)
++++|+|||+||.... ..+++|+.++.+++++|++. ++++||++||.+++... +..| ...
T Consensus 61 ~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~-~~~e-~~~------------ 120 (219)
T 3dqp_A 61 LHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPE-KWIG-AGF------------ 120 (219)
T ss_dssp TTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGG-GCCS-HHH------------
T ss_pred HcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCC-cccc-ccc------------
Confidence 9999999999998642 26778999999999999995 88999999998776431 2222 000
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcC
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (318)
.+ .+.|+.+|+++|++++ ...+++++++||+.++|....+
T Consensus 121 -----------~~------~~~Y~~sK~~~e~~~~--~~~~i~~~ilrp~~v~g~~~~~--------------------- 160 (219)
T 3dqp_A 121 -----------DA------LKDYYIAKHFADLYLT--KETNLDYTIIQPGALTEEEATG--------------------- 160 (219)
T ss_dssp -----------HH------THHHHHHHHHHHHHHH--HSCCCEEEEEEECSEECSCCCS---------------------
T ss_pred -----------cc------ccHHHHHHHHHHHHHH--hccCCcEEEEeCceEecCCCCC---------------------
Confidence 01 1799999999999996 2258999999999999854221
Q ss_pred ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHH
Q psy7539 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 300 (318)
Q Consensus 240 ~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~ 300 (318)
... .+...+++++++|+|++++.++.++.. .+++||++++ ..+++|+++.
T Consensus 161 ~~~----~~~~~~~~i~~~Dva~~i~~~l~~~~~----~g~~~~i~~g---~~~~~e~~~~ 210 (219)
T 3dqp_A 161 LID----INDEVSASNTIGDVADTIKELVMTDHS----IGKVISMHNG---KTAIKEALES 210 (219)
T ss_dssp EEE----ESSSCCCCEEHHHHHHHHHHHHTCGGG----TTEEEEEEEC---SEEHHHHHHT
T ss_pred ccc----cCCCcCCcccHHHHHHHHHHHHhCccc----cCcEEEeCCC---CccHHHHHHH
Confidence 111 136788999999999999999998765 3789999988 5999998764
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-23 Score=181.82 Aligned_cols=196 Identities=13% Similarity=0.121 Sum_probs=157.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+..... ..+++++.+|++++ +++..++
T Consensus 17 ~~la~~L~~~--G~~V~~~~r~~~~~~--------------------------~~~~~~~~~Dl~d~------~~~~~~~ 62 (267)
T 3rft_A 17 RVMRERLAPM--AEILRLADLSPLDPA--------------------------GPNEECVQCDLADA------NAVNAMV 62 (267)
T ss_dssp HHHHHHTGGG--EEEEEEEESSCCCCC--------------------------CTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHhc--CCEEEEEecCCcccc--------------------------CCCCEEEEcCCCCH------HHHHHHH
Confidence 3688999988 899999999754331 35789999999976 6899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC---cccccccCCCCCChhHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE---KVLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~---~~~~E~~~~~p~~~~~~~~ 157 (318)
+++|+|||+||... ..+++..+++|+.|+.+++++|++. ++++|||+||..+++.. ..++|+.+..|.
T Consensus 63 ~~~D~vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~------- 133 (267)
T 3rft_A 63 AGCDGIVHLGGISV-EKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYPQTERLGPDVPARPD------- 133 (267)
T ss_dssp TTCSEEEECCSCCS-CCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC-------
T ss_pred cCCCEEEECCCCcC-cCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCCCCCCCCCCCCCCCC-------
Confidence 99999999999853 4456789999999999999999985 88999999998887642 256666555544
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
+.|+.||+++|.+++.+.. .+++++++||+.++|..
T Consensus 134 ----------------------~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~--------------------- 170 (267)
T 3rft_A 134 ----------------------GLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEP--------------------- 170 (267)
T ss_dssp ----------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSC---------------------
T ss_pred ----------------------ChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCC---------------------
Confidence 8999999999999998876 79999999999887731
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHH
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 297 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el 297 (318)
.++....+|++++|+++++..++..+... ..++++.++ ++.++.++
T Consensus 171 ---------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~----~~~~~~~s~--~~~~~~~~ 216 (267)
T 3rft_A 171 ---------NNYRMLSTWFSHDDFVSLIEAVFRAPVLG----CPVVWGASA--NDAGWWDN 216 (267)
T ss_dssp ---------CSTTHHHHBCCHHHHHHHHHHHHHCSCCC----SCEEEECCC--CTTCCBCC
T ss_pred ---------CCCCceeeEEcHHHHHHHHHHHHhCCCCC----ceEEEEeCC--CCCCcccC
Confidence 23445678999999999999999887652 457777766 55665554
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.1e-23 Score=177.94 Aligned_cols=211 Identities=16% Similarity=0.113 Sum_probs=161.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+ + +++|+++.|+... . .+ +.+|++++ +.+..++
T Consensus 14 ~~l~~~L~-~--g~~V~~~~r~~~~-------------------------~---~~---~~~Dl~~~------~~~~~~~ 53 (273)
T 2ggs_A 14 IELSRLLS-E--RHEVIKVYNSSEI-------------------------Q---GG---YKLDLTDF------PRLEDFI 53 (273)
T ss_dssp HHHHHHHT-T--TSCEEEEESSSCC-------------------------T---TC---EECCTTSH------HHHHHHH
T ss_pred HHHHHHHh-c--CCeEEEecCCCcC-------------------------C---CC---ceeccCCH------HHHHHHH
Confidence 36888888 5 6899999996431 1 12 78999876 6788887
Q ss_pred cC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc-ccccccCCCCCChhH
Q psy7539 81 ET--IHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEEKTYPPPVSPHN 154 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~-~~~E~~~~~p~~~~~ 154 (318)
++ +|+|||+||..... ..+...+++|+.++.+++++|.+. ++ +|||+||.++++... +++|+.+..|.
T Consensus 54 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~---- 127 (273)
T 2ggs_A 54 IKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFDGEKGNYKEEDIPNPI---- 127 (273)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSCSSSCSBCTTSCCCCS----
T ss_pred HhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEcCCCCCcCCCCCCCCC----
Confidence 75 99999999986543 345678999999999999999985 65 899999998886533 56676554443
Q ss_pred HHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHH
Q psy7539 155 VIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLI 234 (318)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~ 234 (318)
+.|+.+|+++|+++.. ++++++||+.+||.. . ....++.
T Consensus 128 -------------------------~~Y~~sK~~~e~~~~~-----~~~~~iR~~~v~G~~---------~--~~~~~~~ 166 (273)
T 2ggs_A 128 -------------------------NYYGLSKLLGETFALQ-----DDSLIIRTSGIFRNK---------G--FPIYVYK 166 (273)
T ss_dssp -------------------------SHHHHHHHHHHHHHCC-----TTCEEEEECCCBSSS---------S--HHHHHHH
T ss_pred -------------------------CHHHHHHHHHHHHHhC-----CCeEEEecccccccc---------H--HHHHHHH
Confidence 8999999999999876 578999999999811 1 1123334
Q ss_pred HHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 235 GAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
....+......++ .++++|++|+|++++.++.++. .++||+++. ++++.|+++.+.+.+|.+.+
T Consensus 167 ~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~------~g~~~i~~~---~~s~~e~~~~~~~~~g~~~~ 230 (273)
T 2ggs_A 167 TLKEGKTVFAFKG---YYSPISARKLASAILELLELRK------TGIIHVAGE---RISRFELALKIKEKFNLPGE 230 (273)
T ss_dssp HHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC------CEEEECCCC---CEEHHHHHHHHHHHTTCCSC
T ss_pred HHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc------CCeEEECCC---cccHHHHHHHHHHHhCCChh
Confidence 4455544444433 8899999999999999998754 459999874 89999999999999976643
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.4e-24 Score=185.10 Aligned_cols=205 Identities=12% Similarity=0.083 Sum_probs=161.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+.... . ..+++++.+|++++ +.+..++
T Consensus 16 ~~l~~~L~~~--g~~V~~~~r~~~~~------------------------~--~~~~~~~~~Dl~d~------~~~~~~~ 61 (267)
T 3ay3_A 16 SAIRPHLGTL--AHEVRLSDIVDLGA------------------------A--EAHEEIVACDLADA------QAVHDLV 61 (267)
T ss_dssp HHHGGGGGGT--EEEEEECCSSCCCC------------------------C--CTTEEECCCCTTCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCEEEEEeCCCccc------------------------c--CCCccEEEccCCCH------HHHHHHH
Confidence 3688889888 89999999975422 1 13678999999876 6888999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC---cccccccCCCCCChhHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE---KVLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~---~~~~E~~~~~p~~~~~~~~ 157 (318)
+++|+|||+||... ...+...+++|+.++.+++++|.+. ++++|||+||.++++.. .+++|+.+..|.
T Consensus 62 ~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~------- 132 (267)
T 3ay3_A 62 KDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD------- 132 (267)
T ss_dssp TTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC-------
T ss_pred cCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC-------
Confidence 99999999999763 3445678999999999999999985 88999999999887652 257776655544
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
+.|+.+|+++|.++..+.. .+++++++||+.+|+..
T Consensus 133 ----------------------~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~--------------------- 169 (267)
T 3ay3_A 133 ----------------------SLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP--------------------- 169 (267)
T ss_dssp ----------------------SHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSC---------------------
T ss_pred ----------------------ChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCC---------------------
Confidence 8999999999999998876 79999999999887421
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
.++...++|+|++|+|++++.++.++.. ...+||+.++ ...++.++.+. +.+|.+
T Consensus 170 ---------~~~~~~~~~~~~~dva~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~d~~~~--~~lg~~ 224 (267)
T 3ay3_A 170 ---------KDARMMATWLSVDDFMRLMKRAFVAPKL----GCTVVYGASA--NTESWWDNDKS--AFLGWV 224 (267)
T ss_dssp ---------CSHHHHHHBCCHHHHHHHHHHHHHSSCC----CEEEEEECCS--CSSCCBCCGGG--GGGCCC
T ss_pred ---------CCCCeeeccccHHHHHHHHHHHHhCCCC----CceeEecCCC--ccccccCHHHH--HHcCCC
Confidence 0122356899999999999999987653 2578888877 67777777766 555543
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-23 Score=180.89 Aligned_cols=204 Identities=12% Similarity=0.093 Sum_probs=152.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++.+|++|++++|+.+... .+ ...+++++.+|++++ +.+..++
T Consensus 13 ~~l~~~L~~~~~g~~V~~~~r~~~~~~---~~--------------------~~~~~~~~~~D~~d~------~~~~~~~ 63 (286)
T 2zcu_A 13 HYVIESLMKTVPASQIVAIVRNPAKAQ---AL--------------------AAQGITVRQADYGDE------AALTSAL 63 (286)
T ss_dssp HHHHHHHTTTSCGGGEEEEESCTTTCH---HH--------------------HHTTCEEEECCTTCH------HHHHHHT
T ss_pred HHHHHHHHhhCCCceEEEEEcChHhhh---hh--------------------hcCCCeEEEcCCCCH------HHHHHHH
Confidence 368888887534789999999754321 11 123688999999986 6899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|+|||+|+... ..|+.++.+++++|++. ++++|||+||.+++. .|
T Consensus 64 ~~~d~vi~~a~~~~---------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~-----------~~----------- 111 (286)
T 2zcu_A 64 QGVEKLLLISSSEV---------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADT-----------SP----------- 111 (286)
T ss_dssp TTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTTT-----------CC-----------
T ss_pred hCCCEEEEeCCCCc---------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC-----------Cc-----------
Confidence 99999999998521 25889999999999985 899999999987641 11
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHh-cC
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAG-KG 239 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~-~~ 239 (318)
..|+.+|.++|+++... +++++++||+.+++... .++.... .+
T Consensus 112 -------------------~~y~~sK~~~e~~~~~~---~~~~~ilrp~~~~~~~~--------------~~~~~~~~~~ 155 (286)
T 2zcu_A 112 -------------------LGLADEHIETEKMLADS---GIVYTLLRNGWYSENYL--------------ASAPAALEHG 155 (286)
T ss_dssp -------------------STTHHHHHHHHHHHHHH---CSEEEEEEECCBHHHHH--------------TTHHHHHHHT
T ss_pred -------------------chhHHHHHHHHHHHHHc---CCCeEEEeChHHhhhhH--------------HHhHHhhcCC
Confidence 68999999999999764 89999999986655211 1122222 23
Q ss_pred ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 240 ~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
.. ..+.+++.++++|++|+|++++.++.++.. .+++||++++ .++|+.|+++.+.+.+|.+.
T Consensus 156 ~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~----~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 217 (286)
T 2zcu_A 156 VF--IGAAGDGKIASATRADYAAAAARVISEAGH----EGKVYELAGD--SAWTLTQLAAELTKQSGKQV 217 (286)
T ss_dssp EE--EESCTTCCBCCBCHHHHHHHHHHHHHSSSC----TTCEEEECCS--SCBCHHHHHHHHHHHHSSCC
T ss_pred ce--eccCCCCccccccHHHHHHHHHHHhcCCCC----CCceEEEeCC--CcCCHHHHHHHHHHHHCCCC
Confidence 22 245678899999999999999999987543 3789999998 89999999999999997553
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-23 Score=176.80 Aligned_cols=200 Identities=11% Similarity=0.080 Sum_probs=153.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccce-EEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKV-IPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|++++|+.+.. +.+ ...++ +++.+|++ . .+...
T Consensus 35 ~~l~~~L~~~--G~~V~~~~R~~~~~---~~~--------------------~~~~~~~~~~~Dl~-~-------~~~~~ 81 (236)
T 3e8x_A 35 RYLLSELKNK--GHEPVAMVRNEEQG---PEL--------------------RERGASDIVVANLE-E-------DFSHA 81 (236)
T ss_dssp HHHHHHHHHT--TCEEEEEESSGGGH---HHH--------------------HHTTCSEEEECCTT-S-------CCGGG
T ss_pred HHHHHHHHhC--CCeEEEEECChHHH---HHH--------------------HhCCCceEEEcccH-H-------HHHHH
Confidence 3789999998 99999999964321 111 12378 89999998 2 45677
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHH
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKA 159 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~ 159 (318)
++++|+|||+||.... ..+...+++|+.++.+++++|++. ++++||++||..+... +..+ .+.
T Consensus 82 ~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~-----~~~~-~~~--------- 144 (236)
T 3e8x_A 82 FASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVDP-----DQGP-MNM--------- 144 (236)
T ss_dssp GTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSCG-----GGSC-GGG---------
T ss_pred HcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCCC-----CCCh-hhh---------
Confidence 7899999999997653 346688999999999999999985 8899999999554321 1110 111
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcC
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (318)
+.|+.+|.++|++++. .+++++++||+.++|....+
T Consensus 145 --------------------~~Y~~sK~~~e~~~~~---~gi~~~~lrpg~v~~~~~~~--------------------- 180 (236)
T 3e8x_A 145 --------------------RHYLVAKRLADDELKR---SSLDYTIVRPGPLSNEESTG--------------------- 180 (236)
T ss_dssp --------------------HHHHHHHHHHHHHHHH---SSSEEEEEEECSEECSCCCS---------------------
T ss_pred --------------------hhHHHHHHHHHHHHHH---CCCCEEEEeCCcccCCCCCC---------------------
Confidence 7899999999999873 38999999999999853211
Q ss_pred ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHH
Q psy7539 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGK 302 (318)
Q Consensus 240 ~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~ 302 (318)
. ......+.+.+++++++|+|++++.++.++.. .+++||++++ +.++.|+++.++
T Consensus 181 ~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~----~g~~~~v~~~---~~~~~e~~~~i~ 235 (236)
T 3e8x_A 181 K-VTVSPHFSEITRSITRHDVAKVIAELVDQQHT----IGKTFEVLNG---DTPIAKVVEQLG 235 (236)
T ss_dssp E-EEEESSCSCCCCCEEHHHHHHHHHHHTTCGGG----TTEEEEEEEC---SEEHHHHHHTC-
T ss_pred e-EEeccCCCcccCcEeHHHHHHHHHHHhcCccc----cCCeEEEeCC---CcCHHHHHHHhc
Confidence 1 12234556679999999999999999998754 3889999998 599999998764
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=182.64 Aligned_cols=218 Identities=13% Similarity=0.053 Sum_probs=161.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCC-HHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKN-SRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~-~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|++.|+++ |++|++++|+.+... ..+++..+ ...+++++.+|++++ +++..+
T Consensus 24 ~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~l-----------------~~~~v~~~~~Dl~d~------~~l~~~ 78 (346)
T 3i6i_A 24 QFVATASLDA--HRPTYILARPGPRSPSKAKIFKAL-----------------EDKGAIIVYGLINEQ------EAMEKI 78 (346)
T ss_dssp HHHHHHHHHT--TCCEEEEECSSCCCHHHHHHHHHH-----------------HHTTCEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--CCCEEEEECCCCCChhHHHHHHHH-----------------HhCCcEEEEeecCCH------HHHHHH
Confidence 4789999998 899999999864321 11122211 135899999999976 789999
Q ss_pred hc--CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCC-CccEEEEeccccccCCcccccccCCCCCChhHHH
Q psy7539 80 SE--TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIH-LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVI 156 (318)
Q Consensus 80 ~~--~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~ 156 (318)
++ ++|+|||+||.. |+.++.+|+++|++. + +++||+ |+.+. ..+|.....|.
T Consensus 79 ~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~-g~v~~~v~-S~~g~-----~~~e~~~~~p~------ 133 (346)
T 3i6i_A 79 LKEHEIDIVVSTVGGE------------SILDQIALVKAMKAV-GTIKRFLP-SEFGH-----DVNRADPVEPG------ 133 (346)
T ss_dssp HHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHH-CCCSEEEC-SCCSS-----CTTTCCCCTTH------
T ss_pred HhhCCCCEEEECCchh------------hHHHHHHHHHHHHHc-CCceEEee-cccCC-----CCCccCcCCCc------
Confidence 99 999999999972 899999999999996 6 999986 43221 22332222222
Q ss_pred HHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 157 EKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
+.|+.+|+++|+++... |++++++||+.++|...... ..+ ....
T Consensus 134 -----------------------~~y~~sK~~~e~~l~~~---g~~~tivrpg~~~g~~~~~~-------~~~---~~~~ 177 (346)
T 3i6i_A 134 -----------------------LNMYREKRRVRQLVEES---GIPFTYICCNSIASWPYYNN-------IHP---SEVL 177 (346)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHT---TCCBEEEECCEESSCCCSCC---------------CC
T ss_pred -----------------------chHHHHHHHHHHHHHHc---CCCEEEEEecccccccCccc-------ccc---cccc
Confidence 78999999999999874 89999999999998543211 110 0011
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC-CCCCceeHHHHHHHHHHhhcccCC
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA-NKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~-~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
..+....+++++++.++|+|++|+|++++.++..+.. .++.|++++ + ..+|+.|+++.+.+.+|.+.+
T Consensus 178 ~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~i~g~~--~~~s~~e~~~~~~~~~g~~~~ 246 (346)
T 3i6i_A 178 PPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT----LNKSVHFRPSC--NCLNINELASVWEKKIGRTLP 246 (346)
T ss_dssp CCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGG----TTEEEECCCGG--GEECHHHHHHHHHHHHTSCCC
T ss_pred CCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccc----cCeEEEEeCCC--CCCCHHHHHHHHHHHHCCCCc
Confidence 1233346778999999999999999999999998764 367899873 4 689999999999999976644
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-21 Score=168.93 Aligned_cols=204 Identities=10% Similarity=0.059 Sum_probs=151.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|++. ++++|++++|+.+... .....+++++.+|++++ +.+..++
T Consensus 14 ~~l~~~L~~~-~g~~V~~~~R~~~~~~-----------------------~~~~~~v~~~~~D~~d~------~~l~~~~ 63 (289)
T 3e48_A 14 THITNQAIAN-HIDHFHIGVRNVEKVP-----------------------DDWRGKVSVRQLDYFNQ------ESMVEAF 63 (289)
T ss_dssp HHHHHHHHHT-TCTTEEEEESSGGGSC-----------------------GGGBTTBEEEECCTTCH------HHHHHHT
T ss_pred HHHHHHHhhC-CCCcEEEEECCHHHHH-----------------------HhhhCCCEEEEcCCCCH------HHHHHHH
Confidence 3688887765 5789999999754321 11235899999999987 6899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|+|||+|+..... ..|+.++.+++++|++. ++++|||+||.+....
T Consensus 64 ~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~~~~----------------------- 112 (289)
T 3e48_A 64 KGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFIGYYADQHN----------------------- 112 (289)
T ss_dssp TTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEEEESCCSTT-----------------------
T ss_pred hCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEEcccCCCCC-----------------------
Confidence 9999999999975422 34899999999999995 8999999999542110
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHH--HHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYT--KCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGK 238 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~s--K~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (318)
.+|..+ +..+|+.+... |++++++||+.++|+. ..++.....
T Consensus 113 -------------------~~~~~~~~~~~~e~~~~~~---g~~~~ilrp~~~~~~~--------------~~~~~~~~~ 156 (289)
T 3e48_A 113 -------------------NPFHMSPYFGYASRLLSTS---GIDYTYVRMAMYMDPL--------------KPYLPELMN 156 (289)
T ss_dssp -------------------CCSTTHHHHHHHHHHHHHH---CCEEEEEEECEESTTH--------------HHHHHHHHH
T ss_pred -------------------CCCccchhHHHHHHHHHHc---CCCEEEEecccccccc--------------HHHHHHHHH
Confidence 222222 23455555443 8999999999887731 122333333
Q ss_pred CceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 239 GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
.. ....+.+++.++|++++|+|++++.++.++.. .+++||++ + ..+|+.|+++.+.+.+|.+.
T Consensus 157 ~~-~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~----~g~~~~~~-~--~~~s~~e~~~~~~~~~g~~~ 219 (289)
T 3e48_A 157 MH-KLIYPAGDGRINYITRNDIARGVIAIIKNPDT----WGKRYLLS-G--YSYDMKELAAILSEASGTEI 219 (289)
T ss_dssp HT-EECCCCTTCEEEEECHHHHHHHHHHHHHCGGG----TTCEEEEC-C--EEEEHHHHHHHHHHHHTSCC
T ss_pred CC-CEecCCCCceeeeEEHHHHHHHHHHHHcCCCc----CCceEEeC-C--CcCCHHHHHHHHHHHHCCce
Confidence 22 23345678999999999999999999988765 27899999 8 89999999999999997654
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=168.58 Aligned_cols=218 Identities=12% Similarity=0.062 Sum_probs=154.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++..+++|+++.|+.+ ++. ....+++++.+|++++ +++.+++
T Consensus 18 ~~l~~~l~~~~~g~~V~~~~r~~~------~~~------------------~~~~~~~~~~~D~~d~------~~~~~~~ 67 (253)
T 1xq6_A 18 QIVYKKLKEGSDKFVAKGLVRSAQ------GKE------------------KIGGEADVFIGDITDA------DSINPAF 67 (253)
T ss_dssp HHHHHHHHHTTTTCEEEEEESCHH------HHH------------------HTTCCTTEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEEEcCCC------chh------------------hcCCCeeEEEecCCCH------HHHHHHH
Confidence 368899998722689999999521 111 1124678899999976 6899999
Q ss_pred cCccEEEEcccccCcch----------------hHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccc
Q psy7539 81 ETIHIVYHIAATVRFDD----------------YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~----------------~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+++|+|||+||...... .....+++|+.++.+++++|++. ++++||++||.+++....
T Consensus 68 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~----- 141 (253)
T 1xq6_A 68 QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPDH----- 141 (253)
T ss_dssp TTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTTC-----
T ss_pred cCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEEEEcCccCCCCCC-----
Confidence 99999999999753210 11236789999999999999985 789999999987642211
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCccc
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTD 224 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~ 224 (318)
|..+. ....|+.+|+++|.++.. .+++++++||+.++|+.....
T Consensus 142 ----~~~~~------------------------~~~~y~~sK~~~e~~~~~---~~i~~~~vrpg~v~~~~~~~~----- 185 (253)
T 1xq6_A 142 ----PLNKL------------------------GNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVR----- 185 (253)
T ss_dssp ----GGGGG------------------------GGCCHHHHHHHHHHHHHT---SSSCEEEEEECEEECSCSSSS-----
T ss_pred ----ccccc------------------------cchhHHHHHHHHHHHHHh---CCCceEEEecceeecCCcchh-----
Confidence 11000 005688899999999875 389999999999999653210
Q ss_pred CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCC-CceeHHHHHHHHHH
Q psy7539 225 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKD-FQITWYDIIENGKD 303 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~-~~~~~~el~~~i~~ 303 (318)
... .+....++. ....+++++|+|++++.++.++.. .+++||++++.. .++++.|+++.+.+
T Consensus 186 ~~~----------~~~~~~~~~---~~~~~~~~~Dva~~~~~~~~~~~~----~g~~~~i~~~~~~~~~s~~e~~~~~~~ 248 (253)
T 1xq6_A 186 ELL----------VGKDDELLQ---TDTKTVPRADVAEVCIQALLFEEA----KNKAFDLGSKPEGTSTPTKDFKALFSQ 248 (253)
T ss_dssp CEE----------EESTTGGGG---SSCCEEEHHHHHHHHHHHTTCGGG----TTEEEEEEECCTTTSCCCCCHHHHHHT
T ss_pred hhh----------ccCCcCCcC---CCCcEEcHHHHHHHHHHHHcCccc----cCCEEEecCCCcCCCCCHHHHHHHHHH
Confidence 000 000001111 235799999999999999987654 378999998621 35999999999998
Q ss_pred hhcc
Q psy7539 304 IARN 307 (318)
Q Consensus 304 ~~~~ 307 (318)
.+|.
T Consensus 249 ~~g~ 252 (253)
T 1xq6_A 249 VTSR 252 (253)
T ss_dssp CCCC
T ss_pred HhCC
Confidence 8743
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=164.40 Aligned_cols=202 Identities=9% Similarity=0.013 Sum_probs=140.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.. ++.+ ....+++++.+|++++. . ..+
T Consensus 14 ~~l~~~L~~~--g~~V~~~~R~~~------~~~~-----------------~~~~~~~~~~~D~~d~~------~--~~~ 60 (224)
T 3h2s_A 14 SAIVAEARRR--GHEVLAVVRDPQ------KAAD-----------------RLGATVATLVKEPLVLT------E--ADL 60 (224)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHH-----------------HTCTTSEEEECCGGGCC------H--HHH
T ss_pred HHHHHHHHHC--CCEEEEEEeccc------cccc-----------------ccCCCceEEeccccccc------H--hhc
Confidence 4789999998 999999999532 1111 11257899999999884 3 667
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc-----ccccccCCCCCChhHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-----VLEEKTYPPPVSPHNV 155 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~-----~~~E~~~~~p~~~~~~ 155 (318)
+++|+|||+||...... ..+.|+.++.+++++|++. + ++||++||.+++.... ..+|...+.|.
T Consensus 61 ~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~----- 129 (224)
T 3h2s_A 61 DSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGADHPMILDFPESAASQ----- 129 (224)
T ss_dssp TTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS-----
T ss_pred ccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCCccccccCCCCCccc-----
Confidence 89999999999862111 2467999999999999985 6 9999999976544321 12222211111
Q ss_pred HHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHH
Q psy7539 156 IEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLI 234 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~ 234 (318)
+.|+.+|.++|.+ ..+.+ .+++++++||+.+||+... .+ +.
T Consensus 130 ------------------------~~y~~sK~~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~~--~~-----~~------ 171 (224)
T 3h2s_A 130 ------------------------PWYDGALYQYYEY-QFLQMNANVNWIGISPSEAFPSGPA--TS-----YV------ 171 (224)
T ss_dssp ------------------------TTHHHHHHHHHHH-HHHTTCTTSCEEEEEECSBCCCCCC--CC-----EE------
T ss_pred ------------------------hhhHHHHHHHHHH-HHHHhcCCCcEEEEcCccccCCCcc--cC-----ce------
Confidence 8899999999954 44443 6999999999999996321 11 10
Q ss_pred HHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHH
Q psy7539 235 GAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 295 (318)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~ 295 (318)
.+. ..+ ..+....++++++|+|++++.++.++.. .+++|++++. ++..+.
T Consensus 172 ---~~~-~~~-~~~~~~~~~i~~~DvA~~~~~~l~~~~~----~g~~~~~~~~--~~~~~~ 221 (224)
T 3h2s_A 172 ---AGK-DTL-LVGEDGQSHITTGNMALAILDQLEHPTA----IRDRIVVRDA--DLEHHH 221 (224)
T ss_dssp ---EES-SBC-CCCTTSCCBCCHHHHHHHHHHHHHSCCC----TTSEEEEEEC--C-----
T ss_pred ---ecc-ccc-ccCCCCCceEeHHHHHHHHHHHhcCccc----cCCEEEEecC--cchhcc
Confidence 000 011 1244567999999999999999998775 3889999987 554443
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-21 Score=170.37 Aligned_cols=217 Identities=13% Similarity=0.027 Sum_probs=157.8
Q ss_pred ChhHHHHHhhCCC-cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCEN-VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~-~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ + ++|++++|+...... +.+ ...+++++.+|++++ +++..+
T Consensus 19 ~~l~~~L~~~--g~~~V~~~~R~~~~~~~-~~l--------------------~~~~~~~~~~D~~d~------~~l~~~ 69 (299)
T 2wm3_A 19 GSVARTLLED--GTFKVRVVTRNPRKKAA-KEL--------------------RLQGAEVVQGDQDDQ------VIMELA 69 (299)
T ss_dssp HHHHHHHHHH--CSSEEEEEESCTTSHHH-HHH--------------------HHTTCEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHhc--CCceEEEEEcCCCCHHH-HHH--------------------HHCCCEEEEecCCCH------HHHHHH
Confidence 3689999998 7 899999997543211 111 124688999999986 689999
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHH
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKA 159 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~ 159 (318)
++++|+|||+|+..... ..+.|+.++.+++++|++. ++++||++||..+++.. +. .+
T Consensus 70 ~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~----~~---~~---------- 126 (299)
T 2wm3_A 70 LNGAYATFIVTNYWESC-----SQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLT----AG---RL---------- 126 (299)
T ss_dssp HTTCSEEEECCCHHHHT-----CHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHT----TT---SC----------
T ss_pred HhcCCEEEEeCCCCccc-----cchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccC----CC---cc----------
Confidence 99999999999853211 2356889999999999985 89999998886654311 10 01
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcC
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (318)
+..|+.+|..+|+++... |++++++||+.++|+.... +.... ...+
T Consensus 127 -------------------~~~y~~sK~~~e~~~~~~---gi~~~ilrp~~~~~~~~~~---~~~~~---------~~~g 172 (299)
T 2wm3_A 127 -------------------AAAHFDGKGEVEEYFRDI---GVPMTSVRLPCYFENLLSH---FLPQK---------APDG 172 (299)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHH---TCCEEEEECCEEGGGGGTT---TCCEE---------CTTS
T ss_pred -------------------cCchhhHHHHHHHHHHHC---CCCEEEEeecHHhhhchhh---cCCcc---------cCCC
Confidence 178999999999999875 8999999999999964321 10000 0112
Q ss_pred ceee-EecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 240 IIRT-MYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 240 ~~~~-~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
.... ....+++.++|++++|+|++++.++.++... .++.||++++ .+|+.|+++.+.+.+|.+.
T Consensus 173 ~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~---~g~~~~~~g~---~~s~~e~~~~~~~~~g~~~ 237 (299)
T 2wm3_A 173 KSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKY---VGQNIGLSTC---RHTAEEYAALLTKHTRKVV 237 (299)
T ss_dssp SSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHH---TTCEEECCSE---EECHHHHHHHHHHHHSSCE
T ss_pred CEEEEEecCCCCccceecHHHHHHHHHHHHcChhhh---CCeEEEeeec---cCCHHHHHHHHHHHHCCCc
Confidence 1111 1234778899999999999999999864210 2679999865 7999999999999997654
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.2e-21 Score=160.27 Aligned_cols=202 Identities=8% Similarity=-0.030 Sum_probs=129.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+. +. ...++++++.+|++++. . ..+
T Consensus 14 ~~l~~~L~~~--g~~V~~~~R~~~~------~~------------------~~~~~~~~~~~D~~d~~------~--~~~ 59 (221)
T 3ew7_A 14 SRILEEAKNR--GHEVTAIVRNAGK------IT------------------QTHKDINILQKDIFDLT------L--SDL 59 (221)
T ss_dssp HHHHHHHHHT--TCEEEEEESCSHH------HH------------------HHCSSSEEEECCGGGCC------H--HHH
T ss_pred HHHHHHHHhC--CCEEEEEEcCchh------hh------------------hccCCCeEEeccccChh------h--hhh
Confidence 4789999998 8999999996321 11 11268899999999874 3 667
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc---ccccccCCCCCChhHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK---VLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~---~~~E~~~~~p~~~~~~~~ 157 (318)
.++|+|||+||.... ....|+.++.+++++|++. ++++||++||.+++.... ...|+....|.
T Consensus 60 ~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~------- 125 (221)
T 3ew7_A 60 SDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDGNTLLESKGLREA------- 125 (221)
T ss_dssp TTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC-------------------C-------
T ss_pred cCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCCccccccCCCCCH-------
Confidence 899999999998432 2456999999999999985 789999999976654321 22222222221
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhh-hcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYM-EAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
+.|+.+|..+|.+..... ..+++++++||+.+||+.. .. +.+.
T Consensus 126 ----------------------~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~~--~~----~~~~-------- 169 (221)
T 3ew7_A 126 ----------------------PYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGE--RT----GDYQ-------- 169 (221)
T ss_dssp ----------------------CCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC---------------------
T ss_pred ----------------------HHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCCC--cc----CceE--------
Confidence 789999999999733332 3589999999999998621 11 1010
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHH
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 295 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~ 295 (318)
..+....+.+++ .++++++|+|++++.+++++.. .++.||++++ .+.+-.
T Consensus 170 ~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~----~g~~~~~~~~--~~~~~~ 219 (221)
T 3ew7_A 170 IGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNH----LNEHFTVAGK--LEHHHH 219 (221)
T ss_dssp -----------------CCCHHHHHHHHHHHHHSCSC----TTSEEECCC---------
T ss_pred eccccceecCCC---CceEeHHHHHHHHHHHHhCccc----cCCEEEECCC--Cccccc
Confidence 011111122222 3799999999999999998876 3899999998 655543
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.84 E-value=3.8e-20 Score=158.24 Aligned_cols=194 Identities=17% Similarity=0.142 Sum_probs=142.5
Q ss_pred ChhHHHHHhhCCCc--EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH
Q psy7539 1 KVLLEKILRTCENV--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~--~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~ 78 (318)
++|+++|+++ |+ +|+++.|+..... .....+++++.+|++++ +++..
T Consensus 32 ~~l~~~L~~~--G~~~~V~~~~r~~~~~~-----------------------~~~~~~~~~~~~D~~d~------~~~~~ 80 (242)
T 2bka_A 32 RVLLKEILEQ--GLFSKVTLIGRRKLTFD-----------------------EEAYKNVNQEVVDFEKL------DDYAS 80 (242)
T ss_dssp HHHHHHHHHH--TCCSEEEEEESSCCCCC-----------------------SGGGGGCEEEECCGGGG------GGGGG
T ss_pred HHHHHHHHcC--CCCCEEEEEEcCCCCcc-----------------------ccccCCceEEecCcCCH------HHHHH
Confidence 4789999999 88 9999999754331 11124688999999987 57888
Q ss_pred HhcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHH
Q psy7539 79 LSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEK 158 (318)
Q Consensus 79 ~~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~ 158 (318)
+++++|+|||+||...........+++|+.++.+++++|++. ++++||++||.++++. +.
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~-----------~~-------- 140 (242)
T 2bka_A 81 AFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKS-----------SN-------- 140 (242)
T ss_dssp GGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-----------CS--------
T ss_pred HhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCC-----------Cc--------
Confidence 889999999999976544456678999999999999999985 7899999999887642 11
Q ss_pred HhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCC-cEEEecccccccccCCCCCCcccCCCchHHHHHHHh
Q psy7539 159 AELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGM-PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAG 237 (318)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~ 237 (318)
+.|+.+|.+.|.+++.+ ++ +++++||+.++|+...+ .....+....
T Consensus 141 ---------------------~~Y~~sK~~~e~~~~~~---~~~~~~~vrpg~v~~~~~~~---------~~~~~~~~~~ 187 (242)
T 2bka_A 141 ---------------------FLYLQVKGEVEAKVEEL---KFDRYSVFRPGVLLCDRQES---------RPGEWLVRKF 187 (242)
T ss_dssp ---------------------SHHHHHHHHHHHHHHTT---CCSEEEEEECCEEECTTGGG---------SHHHHHHHHH
T ss_pred ---------------------chHHHHHHHHHHHHHhc---CCCCeEEEcCceecCCCCCC---------cHHHHHHHHh
Confidence 78999999999998876 67 59999999999964211 1112222211
Q ss_pred cCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 238 KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+..+. ......+++++|+|++++.++.++.. .+.|++.++
T Consensus 188 ~~~~~~----~~~~~~~~~~~dva~~~~~~~~~~~~-----~~~~~~~~~ 228 (242)
T 2bka_A 188 FGSLPD----SWASGHSVPVVTVVRAMLNNVVRPRD-----KQMELLENK 228 (242)
T ss_dssp HCSCCT----TGGGGTEEEHHHHHHHHHHHHTSCCC-----SSEEEEEHH
T ss_pred hcccCc----cccCCcccCHHHHHHHHHHHHhCccc-----cCeeEeeHH
Confidence 111111 11123589999999999999987664 456666543
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-20 Score=163.81 Aligned_cols=226 Identities=10% Similarity=0.085 Sum_probs=155.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|++++|+.+.... ++...+. .....+++++.+|++++ +++..++
T Consensus 18 ~~l~~~L~~~--g~~V~~~~R~~~~~~~-~~~~~~~--------------~~~~~~~~~~~~D~~d~------~~l~~~~ 74 (313)
T 1qyd_A 18 KRIVNASISL--GHPTYVLFRPEVVSNI-DKVQMLL--------------YFKQLGAKLIEASLDDH------QRLVDAL 74 (313)
T ss_dssp HHHHHHHHHT--TCCEEEECCSCCSSCH-HHHHHHH--------------HHHTTTCEEECCCSSCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCcEEEEECCCcccch-hHHHHHH--------------HHHhCCeEEEeCCCCCH------HHHHHHH
Confidence 3789999998 8999999998653211 1111110 01124789999999986 6899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCC-CccEEEEeccccccCCcccccccCCCCCChhHHHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIH-LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKA 159 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~ 159 (318)
+++|+|||+|+..... .|+.++.+++++|++. + +++||+ |+ ++.... .. + ....|.
T Consensus 75 ~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~-g~v~~~v~-S~-~g~~~~-~~-~-~~~~p~--------- 131 (313)
T 1qyd_A 75 KQVDVVISALAGGVLS--------HHILEQLKLVEAIKEA-GNIKRFLP-SE-FGMDPD-IM-E-HALQPG--------- 131 (313)
T ss_dssp TTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHS-CCCSEEEC-SC-CSSCTT-SC-C-CCCSST---------
T ss_pred hCCCEEEECCccccch--------hhHHHHHHHHHHHHhc-CCCceEEe-cC-CcCCcc-cc-c-cCCCCC---------
Confidence 9999999999975432 3788999999999996 6 999986 43 221111 10 0 011110
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcC
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (318)
...| .+|..+|++++.. +++++++||+.++|........ .. + .....+
T Consensus 132 -------------------~~~y-~sK~~~e~~~~~~---g~~~~ilrp~~~~~~~~~~~~~---~~-~-----~~~~~~ 179 (313)
T 1qyd_A 132 -------------------SITF-IDKRKVRRAIEAA---SIPYTYVSSNMFAGYFAGSLAQ---LD-G-----HMMPPR 179 (313)
T ss_dssp -------------------THHH-HHHHHHHHHHHHT---TCCBCEEECCEEHHHHTTTSSC---TT-C-----CSSCCS
T ss_pred -------------------cchH-HHHHHHHHHHHhc---CCCeEEEEeceecccccccccc---cc-c-----cccCCC
Confidence 0568 9999999998754 8999999999888753321110 00 0 000112
Q ss_pred ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC-CCCCceeHHHHHHHHHHhhcccCC
Q psy7539 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA-NKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 240 ~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~-~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
....++++++..+++++++|+|++++.++.++.. .++.|++.+ + ..+|+.|+++.+.+..|.+.+
T Consensus 180 ~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~g~~--~~~s~~e~~~~~~~~~g~~~~ 245 (313)
T 1qyd_A 180 DKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT----LNKTMYIRPPM--NILSQKEVIQIWERLSEQNLD 245 (313)
T ss_dssp SEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG----SSSEEECCCGG--GEEEHHHHHHHHHHHHTCCCE
T ss_pred CeEEEeCCCCceEEEEEHHHHHHHHHHHHhCccc----CCceEEEeCCC--CccCHHHHHHHHHHhcCCCCc
Confidence 2234567788999999999999999999987654 256777764 4 579999999999999976543
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-21 Score=162.37 Aligned_cols=190 Identities=15% Similarity=0.034 Sum_probs=141.4
Q ss_pred ChhHHHHHhhCCCc--EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH
Q psy7539 1 KVLLEKILRTCENV--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~--~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~ 78 (318)
++|+++|+++ +. +|+++.|+.... .++++++.+|++++ +++..
T Consensus 19 ~~l~~~l~~~--g~~~~V~~~~r~~~~~---------------------------~~~~~~~~~D~~~~------~~~~~ 63 (215)
T 2a35_A 19 EHLLDRILSE--PTLAKVIAPARKALAE---------------------------HPRLDNPVGPLAEL------LPQLD 63 (215)
T ss_dssp HHHHHHHHHC--TTCCEEECCBSSCCCC---------------------------CTTEECCBSCHHHH------GGGCC
T ss_pred HHHHHHHHhC--CCCCeEEEEeCCCccc---------------------------CCCceEEeccccCH------HHHHH
Confidence 3688999998 76 999999975431 13678889998865 34555
Q ss_pred HhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHH
Q psy7539 79 LSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 79 ~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~ 157 (318)
++ +|+|||+||.... ......++++|+.++.+++++|.+. ++++||++||.++++. |.
T Consensus 64 ~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~-----------~~------- 122 (215)
T 2a35_A 64 GS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK-----------SS------- 122 (215)
T ss_dssp SC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-----------CS-------
T ss_pred hh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCC-----------Cc-------
Confidence 55 9999999997542 2345678999999999999999985 8899999999887642 11
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCc-EEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMP-CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
+.|+.+|.++|+++... +++ ++++||+.+||+...+ .+... +
T Consensus 123 ----------------------~~y~~sK~~~e~~~~~~---~~~~~~~vrp~~v~g~~~~~--~~~~~----------~ 165 (215)
T 2a35_A 123 ----------------------IFYNRVKGELEQALQEQ---GWPQLTIARPSLLFGPREEF--RLAEI----------L 165 (215)
T ss_dssp ----------------------SHHHHHHHHHHHHHTTS---CCSEEEEEECCSEESTTSCE--EGGGG----------T
T ss_pred ----------------------cHHHHHHHHHHHHHHHc---CCCeEEEEeCceeeCCCCcc--hHHHH----------H
Confidence 88999999999998875 899 9999999999965431 11111 1
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHH
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 295 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~ 295 (318)
. +....+ . .+.++++|++|+|++++.++.++. ++.||++++ +.+++.
T Consensus 166 ~-~~~~~~-~--~~~~~~i~~~Dva~~~~~~~~~~~------~~~~~i~~~--~~~~~~ 212 (215)
T 2a35_A 166 A-APIARI-L--PGKYHGIEACDLARALWRLALEEG------KGVRFVESD--ELRKLG 212 (215)
T ss_dssp T-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC------SEEEEEEHH--HHHHHH
T ss_pred H-Hhhhhc-c--CCCcCcEeHHHHHHHHHHHHhcCC------CCceEEcHH--HHHHhh
Confidence 1 111111 1 237899999999999999998754 679999987 555543
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-20 Score=168.41 Aligned_cols=218 Identities=15% Similarity=0.073 Sum_probs=154.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEecc-CCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD-VAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD-l~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|++++|+.+.... +.+. ...+++++.+| ++++ +++..+
T Consensus 19 ~~l~~~L~~~--g~~V~~~~R~~~~~~~-~~l~-------------------~~~~v~~v~~D~l~d~------~~l~~~ 70 (352)
T 1xgk_A 19 ASLIRVAAAV--GHHVRAQVHSLKGLIA-EELQ-------------------AIPNVTLFQGPLLNNV------PLMDTL 70 (352)
T ss_dssp HHHHHHHHHT--TCCEEEEESCSCSHHH-HHHH-------------------TSTTEEEEESCCTTCH------HHHHHH
T ss_pred HHHHHHHHhC--CCEEEEEECCCChhhH-HHHh-------------------hcCCcEEEECCccCCH------HHHHHH
Confidence 3789999988 8999999997543210 1111 11368899999 9876 688899
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCC-CccEEEEeccccccCCcccccccCCCCCChhHHHHH
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIH-LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEK 158 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~ 158 (318)
++++|+|||+++.... ..|..+ .+++++|++. + +++|||+||.++... . ..+
T Consensus 71 ~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~~----~----~~~--------- 123 (352)
T 1xgk_A 71 FEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSLY----G----PWP--------- 123 (352)
T ss_dssp HTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGGT----S----SCC---------
T ss_pred HhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEeCCcccccc----C----CCC---------
Confidence 9999999999975321 236666 9999999986 7 899999999763110 0 011
Q ss_pred HhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhc
Q psy7539 159 AELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGK 238 (318)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (318)
++.|+.||+++|+++... +++++++||+ +||........ .++.. .....
T Consensus 124 --------------------~~~y~~sK~~~E~~~~~~---gi~~~ivrpg-~~g~~~~~~~~---~~~~~----~~~~~ 172 (352)
T 1xgk_A 124 --------------------AVPMWAPKFTVENYVRQL---GLPSTFVYAG-IYNNNFTSLPY---PLFQM----ELMPD 172 (352)
T ss_dssp --------------------CCTTTHHHHHHHHHHHTS---SSCEEEEEEC-EEGGGCBSSSC---SSCBE----EECTT
T ss_pred --------------------CccHHHHHHHHHHHHHHc---CCCEEEEecc-eecCCchhccc---ccccc----cccCC
Confidence 178999999999999875 8999999987 67754321100 01100 00012
Q ss_pred Ccee-eEecCCCcccCcchH-HHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 239 GIIR-TMYCDYSTCADFLPV-DVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 239 ~~~~-~~~~~~~~~~~~v~v-~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
+... .+++++++.++++|+ +|+|++++.++.++... ..+++||++++ .+|+.|+++.+.+..|.+.
T Consensus 173 g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~--~~g~~~~l~~~---~~s~~e~~~~i~~~~G~~~ 240 (352)
T 1xgk_A 173 GTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK--WNGHRIALTFE---TLSPVQVCAAFSRALNRRV 240 (352)
T ss_dssp SCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH--HTTCEEEECSE---EECHHHHHHHHHHHHTSCE
T ss_pred CceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchh--hCCeEEEEecC---CCCHHHHHHHHHHHHCCCC
Confidence 3221 345678899999999 89999999999874210 02789999965 7999999999999997653
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=149.90 Aligned_cols=188 Identities=13% Similarity=0.043 Sum_probs=137.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+.+... .....+++++.+|++++ +.+..++
T Consensus 17 ~~l~~~l~~~--g~~V~~~~r~~~~~~-----------------------~~~~~~~~~~~~D~~~~------~~~~~~~ 65 (206)
T 1hdo_A 17 LTTLAQAVQA--GYEVTVLVRDSSRLP-----------------------SEGPRPAHVVVGDVLQA------ADVDKTV 65 (206)
T ss_dssp HHHHHHHHHT--TCEEEEEESCGGGSC-----------------------SSSCCCSEEEESCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCeEEEEEeChhhcc-----------------------cccCCceEEEEecCCCH------HHHHHHH
Confidence 3689999998 899999999643221 11135789999999876 6888999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|+|||+|+....... .++|+.++.+++++|++. ++++||++||.++++..... +.+.
T Consensus 66 ~~~d~vi~~a~~~~~~~~----~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~~~-----~~~~---------- 125 (206)
T 1hdo_A 66 AGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTKV-----PPRL---------- 125 (206)
T ss_dssp TTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTCS-----CGGG----------
T ss_pred cCCCEEEECccCCCCCCc----cchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCcccc-----cccc----------
Confidence 999999999997543221 247999999999999985 88999999999877542110 0011
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
..|+.+|.++|+++... +++++++||+.+ |.... . +.+.
T Consensus 126 -------------------~~y~~~K~~~e~~~~~~---~i~~~~lrp~~~-~~~~~--~----~~~~------------ 164 (206)
T 1hdo_A 126 -------------------QAVTDDHIRMHKVLRES---GLKYVAVMPPHI-GDQPL--T----GAYT------------ 164 (206)
T ss_dssp -------------------HHHHHHHHHHHHHHHHT---CSEEEEECCSEE-ECCCC--C----SCCE------------
T ss_pred -------------------hhHHHHHHHHHHHHHhC---CCCEEEEeCCcc-cCCCC--C----cceE------------
Confidence 78999999999998653 899999999987 32211 0 1000
Q ss_pred eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 241 IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 241 ~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..+...+. .++++++|+|++++.++.++.. .+++||++++
T Consensus 165 -~~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~----~g~~~~i~~g 204 (206)
T 1hdo_A 165 -VTLDGRGP--SRVISKHDLGHFMLRCLTTDEY----DGHSTYPSHQ 204 (206)
T ss_dssp -EESSSCSS--CSEEEHHHHHHHHHHTTSCSTT----TTCEEEEECC
T ss_pred -ecccCCCC--CCccCHHHHHHHHHHHhcCccc----cccceeeecc
Confidence 00111111 5899999999999999988653 3789999987
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.9e-19 Score=157.35 Aligned_cols=220 Identities=9% Similarity=0.101 Sum_probs=152.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|++++|+.+.....++...+ + .....+++++.+|++++ +++..++
T Consensus 18 ~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~-~-------------~l~~~~v~~v~~D~~d~------~~l~~~~ 75 (308)
T 1qyc_A 18 RHVAKASLDL--GHPTFLLVRESTASSNSEKAQLL-E-------------SFKASGANIVHGSIDDH------ASLVEAV 75 (308)
T ss_dssp HHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHH-H-------------HHHTTTCEEECCCTTCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCCEEEEECCcccccCHHHHHHH-H-------------HHHhCCCEEEEeccCCH------HHHHHHH
Confidence 4789999998 89999999975432111111111 0 11124789999999986 6899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCC-CccEEEEeccccccCCcccccccCCCCCChhHHHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIH-LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKA 159 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~ 159 (318)
+++|+|||+|+... +.++.+++++|++. + +++||+ |+.+.. .+|.....|. .
T Consensus 76 ~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~-S~~g~~-----~~~~~~~~p~--~------ 128 (308)
T 1qyc_A 76 KNVDVVISTVGSLQ------------IESQVNIIKAIKEV-GTVKRFFP-SEFGND-----VDNVHAVEPA--K------ 128 (308)
T ss_dssp HTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCSEEEC-SCCSSC-----TTSCCCCTTH--H------
T ss_pred cCCCEEEECCcchh------------hhhHHHHHHHHHhc-CCCceEee-cccccC-----ccccccCCcc--h------
Confidence 99999999998642 55678999999986 6 999984 442211 1121111110 0
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcC
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (318)
..| .+|..+|++++.. +++++++||+.++|......... + .....+
T Consensus 129 --------------------~~y-~sK~~~e~~~~~~---~~~~~~~r~~~~~~~~~~~~~~~-----~-----~~~~~~ 174 (308)
T 1qyc_A 129 --------------------SVF-EVKAKVRRAIEAE---GIPYTYVSSNCFAGYFLRSLAQA-----G-----LTAPPR 174 (308)
T ss_dssp --------------------HHH-HHHHHHHHHHHHH---TCCBEEEECCEEHHHHTTTTTCT-----T-----CSSCCS
T ss_pred --------------------hHH-HHHHHHHHHHHhc---CCCeEEEEeceeccccccccccc-----c-----ccCCCC
Confidence 578 9999999998764 89999999999887533211100 0 000122
Q ss_pred ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC-CCCCceeHHHHHHHHHHhhcccC
Q psy7539 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA-NKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 240 ~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~-~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
....++++++..++|++++|+|++++.++.++.. .++.|++.+ + ..+|+.|+++.+.+..|.+.
T Consensus 175 ~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~g~~--~~~s~~e~~~~~~~~~g~~~ 239 (308)
T 1qyc_A 175 DKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT----LNKTLYLRLPA--NTLSLNELVALWEKKIDKTL 239 (308)
T ss_dssp SEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG----TTEEEECCCGG--GEEEHHHHHHHHHHHTTSCC
T ss_pred CceEEecCCCceEEEecHHHHHHHHHHHHhCccc----cCeEEEEeCCC--CccCHHHHHHHHHHHhCCCC
Confidence 2335667888999999999999999999987654 267788764 4 57999999999999997654
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=159.95 Aligned_cols=212 Identities=15% Similarity=0.100 Sum_probs=150.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|++++|+.+.. .+.+.++ ...+++++.+|++++ +++..++
T Consensus 25 ~~l~~~L~~~--g~~V~~l~R~~~~~--~~~~~~l-----------------~~~~v~~v~~Dl~d~------~~l~~a~ 77 (318)
T 2r6j_A 25 NHMVKGSLKL--GHPTYVFTRPNSSK--TTLLDEF-----------------QSLGAIIVKGELDEH------EKLVELM 77 (318)
T ss_dssp HHHHHHHHHT--TCCEEEEECTTCSC--HHHHHHH-----------------HHTTCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCcEEEEECCCCch--hhHHHHh-----------------hcCCCEEEEecCCCH------HHHHHHH
Confidence 3789999998 89999999976422 1222111 124688999999986 6899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCC-CccEEEEeccccccCCcccccccCCCCCChhHHHHHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIH-LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKA 159 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~ 159 (318)
+++|+|||+|+... +.++.+++++|++. + +++||+ |+ ++.. .+|. .+..+.
T Consensus 78 ~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~-S~-~g~~----~~~~---~~~~p~------ 129 (318)
T 2r6j_A 78 KKVDVVISALAFPQ------------ILDQFKILEAIKVA-GNIKRFLP-SD-FGVE----EDRI---NALPPF------ 129 (318)
T ss_dssp TTCSEEEECCCGGG------------STTHHHHHHHHHHH-CCCCEEEC-SC-CSSC----TTTC---CCCHHH------
T ss_pred cCCCEEEECCchhh------------hHHHHHHHHHHHhc-CCCCEEEe-ec-cccC----cccc---cCCCCc------
Confidence 99999999998642 56789999999986 6 899985 43 2211 1111 111010
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcC
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKG 239 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (318)
...| .+|..+|++++.. +++++++||+.+++... ..++.....+
T Consensus 130 -------------------~~~y-~sK~~~e~~~~~~---~~~~~~lr~~~~~~~~~-------------~~~~~~~~~~ 173 (318)
T 2r6j_A 130 -------------------EALI-ERKRMIRRAIEEA---NIPYTYVSANCFASYFI-------------NYLLRPYDPK 173 (318)
T ss_dssp -------------------HHHH-HHHHHHHHHHHHT---TCCBEEEECCEEHHHHH-------------HHHHCTTCCC
T ss_pred -------------------chhH-HHHHHHHHHHHhc---CCCeEEEEcceehhhhh-------------hhhccccCCC
Confidence 0578 9999999998764 89999999997655210 0111111223
Q ss_pred ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEee-CCCCCceeHHHHHHHHHHhhcccC
Q psy7539 240 IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT-ANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 240 ~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~-~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
....++++++..++|++++|+|++++.++.++.. .++.|++. ++ ..+|+.|+++.+.+.+|.+.
T Consensus 174 ~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~g~~--~~~s~~e~~~~~~~~~g~~~ 238 (318)
T 2r6j_A 174 DEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA----LNRVVIYRPST--NIITQLELISRWEKKIGKKF 238 (318)
T ss_dssp SEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG----TTEEEECCCGG--GEEEHHHHHHHHHHHHTCCC
T ss_pred CceEEecCCCceeeEeeHHHHHHHHHHHhcCccc----cCeEEEecCCC--CccCHHHHHHHHHHHhCCCC
Confidence 3335667888999999999999999999987654 25677776 44 57999999999999997654
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=153.42 Aligned_cols=220 Identities=13% Similarity=0.096 Sum_probs=150.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccC-CCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPK-KNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~-~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|++.|+++ |++|++++|+. +.....++.... + .....+++++.+|++++ +++..+
T Consensus 16 ~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~-~-------------~l~~~~v~~v~~D~~d~------~~l~~~ 73 (307)
T 2gas_A 16 RHIVWASIKA--GNPTYALVRKTITAANPETKEELI-D-------------NYQSLGVILLEGDINDH------ETLVKA 73 (307)
T ss_dssp HHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHH-H-------------HHHHTTCEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHH-H-------------HHHhCCCEEEEeCCCCH------HHHHHH
Confidence 4789999999 89999999975 221110222111 0 00124688999999986 689999
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCC-CccEEEEeccccccCCcccccccCCCCCChhHHHHH
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIH-LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEK 158 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~ 158 (318)
++++|+|||+|+... +.++.+++++|++. + +++||+ |+ ++.. .+|.....|. .
T Consensus 74 ~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~-S~-~g~~----~~~~~~~~p~--~----- 127 (307)
T 2gas_A 74 IKQVDIVICAAGRLL------------IEDQVKIIKAIKEA-GNVKKFFP-SE-FGLD----VDRHDAVEPV--R----- 127 (307)
T ss_dssp HTTCSEEEECSSSSC------------GGGHHHHHHHHHHH-CCCSEEEC-SC-CSSC----TTSCCCCTTH--H-----
T ss_pred HhCCCEEEECCcccc------------cccHHHHHHHHHhc-CCceEEee-cc-cccC----cccccCCCcc--h-----
Confidence 999999999999743 55778999999986 6 899983 33 2211 1121111110 0
Q ss_pred HhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhc
Q psy7539 159 AELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGK 238 (318)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (318)
+.| .+|..+|+++... +++++++||+.+++........ .. .....
T Consensus 128 ---------------------~~y-~sK~~~e~~~~~~---~i~~~~lrp~~~~~~~~~~~~~---~~-------~~~~~ 172 (307)
T 2gas_A 128 ---------------------QVF-EEKASIRRVIEAE---GVPYTYLCCHAFTGYFLRNLAQ---LD-------ATDPP 172 (307)
T ss_dssp ---------------------HHH-HHHHHHHHHHHHH---TCCBEEEECCEETTTTGGGTTC---TT-------CSSCC
T ss_pred ---------------------hHH-HHHHHHHHHHHHc---CCCeEEEEcceeeccccccccc---cc-------cccCC
Confidence 578 9999999998764 8999999999887743211000 00 00011
Q ss_pred CceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC-CCCCceeHHHHHHHHHHhhcccC
Q psy7539 239 GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA-NKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~-~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
+....++++++..+++++++|+|++++.++..+.. .++.|++.+ + ..+|+.|+++.+.+..|.+.
T Consensus 173 ~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~~~~~~~~~~--~~~s~~e~~~~~~~~~g~~~ 238 (307)
T 2gas_A 173 RDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNT----LNKAVHIRLPK--NYLTQNEVIALWEKKIGKTL 238 (307)
T ss_dssp SSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGG----TTEEEECCCGG--GEEEHHHHHHHHHHHHTSCC
T ss_pred CCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccc----cCceEEEeCCC--CcCCHHHHHHHHHHHhCCCC
Confidence 22234567788899999999999999999987654 256777764 4 57999999999999997654
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.9e-19 Score=156.74 Aligned_cols=215 Identities=13% Similarity=0.095 Sum_probs=151.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccC-CCCC--HHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPK-KNKN--SRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQ 77 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~-~~~~--~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~ 77 (318)
++|++.|+++ |++|++++|+. +... ..+.+..+ ...+++++.+|++++ +++.
T Consensus 18 ~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~l~~~-----------------~~~~v~~v~~D~~d~------~~l~ 72 (321)
T 3c1o_A 18 KFMVRASLSF--SHPTFIYARPLTPDSTPSSVQLREEF-----------------RSMGVTIIEGEMEEH------EKMV 72 (321)
T ss_dssp HHHHHHHHHT--TCCEEEEECCCCTTCCHHHHHHHHHH-----------------HHTTCEEEECCTTCH------HHHH
T ss_pred HHHHHHHHhC--CCcEEEEECCcccccChHHHHHHHHh-----------------hcCCcEEEEecCCCH------HHHH
Confidence 3789999998 89999999975 3211 11111111 124789999999986 6899
Q ss_pred HHhcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCC-CccEEEEeccccccCCcccccccCCCCCChhHHH
Q psy7539 78 MLSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIH-LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVI 156 (318)
Q Consensus 78 ~~~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~ 156 (318)
.+++++|+|||+|+... +.++.+++++|++. + +++||+ |.++.. .+|.. +..+.
T Consensus 73 ~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~--S~~g~~----~~~~~---~~~p~--- 127 (321)
T 3c1o_A 73 SVLKQVDIVISALPFPM------------ISSQIHIINAIKAA-GNIKRFLP--SDFGCE----EDRIK---PLPPF--- 127 (321)
T ss_dssp HHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCCEEEC--SCCSSC----GGGCC---CCHHH---
T ss_pred HHHcCCCEEEECCCccc------------hhhHHHHHHHHHHh-CCccEEec--cccccC----ccccc---cCCCc---
Confidence 99999999999998642 66788999999986 6 999983 333211 11211 11000
Q ss_pred HHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHH--
Q psy7539 157 EKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLI-- 234 (318)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~-- 234 (318)
.+.| .+|..+|++++.. +++++++||+.+++... ..+..
T Consensus 128 ----------------------~~~y-~sK~~~e~~~~~~---~~~~~~lrp~~~~~~~~-------------~~~~~~~ 168 (321)
T 3c1o_A 128 ----------------------ESVL-EKKRIIRRAIEAA---ALPYTYVSANCFGAYFV-------------NYLLHPS 168 (321)
T ss_dssp ----------------------HHHH-HHHHHHHHHHHHH---TCCBEEEECCEEHHHHH-------------HHHHCCC
T ss_pred ----------------------chHH-HHHHHHHHHHHHc---CCCeEEEEeceeccccc-------------ccccccc
Confidence 0679 9999999999764 89999999998766311 01110
Q ss_pred -HHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC-CCCCceeHHHHHHHHHHhhcccCC
Q psy7539 235 -GAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA-NKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 235 -~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~-~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
....+.....+++++..+++++++|+|++++.++.++.. .++.|++.+ + ..+|+.|+++.+.+.+|.+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~g~~~~~~g~~--~~~t~~e~~~~~~~~~g~~~~ 240 (321)
T 3c1o_A 169 PHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRC----CNRIVIYRPPK--NIISQNELISLWEAKSGLSFK 240 (321)
T ss_dssp SSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGG----TTEEEECCCGG--GEEEHHHHHHHHHHHHTSCCC
T ss_pred ccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccc----cCeEEEEeCCC--CcccHHHHHHHHHHHcCCcce
Confidence 001222334567888999999999999999999987654 267788864 4 589999999999999976543
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-17 Score=143.53 Aligned_cols=225 Identities=11% Similarity=0.058 Sum_probs=155.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ . ...++.++.+|++++ +++..++
T Consensus 30 ~~~a~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~-~~~~~~~~~~D~~~~------~~~~~~~ 83 (278)
T 2bgk_A 30 ETTAKLFVRY--GAKVVIADIADD---HGQKVCNNI--------------G-SPDVISFVHCDVTKD------EDVRNLV 83 (278)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------C-CTTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCChh---HHHHHHHHh--------------C-CCCceEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999988521 111111111 0 012789999999986 5677666
Q ss_pred c-------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..++....
T Consensus 84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-- 161 (278)
T 2bgk_A 84 DTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE-- 161 (278)
T ss_dssp HHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT--
T ss_pred HHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC--
Confidence 5 79999999997532 1345678999999999999988753 2467999999987754310
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.+. ..|+.||.+.|.+++.+.. .|++++++|||.++|+...
T Consensus 162 ------~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 206 (278)
T 2bgk_A 162 ------GVS-----------------------------HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLT 206 (278)
T ss_dssp ------TSC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCT
T ss_pred ------CCC-----------------------------cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhh
Confidence 011 6899999999999988764 5899999999999886532
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHH
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 297 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el 297 (318)
... .........+... .+.....+++++|+|++++.++...... ..+..|++.++ ..+++.|+
T Consensus 207 ~~~------~~~~~~~~~~~~~-------~~~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gg--~~~~~~e~ 269 (278)
T 2bgk_A 207 DVF------GVDSSRVEELAHQ-------AANLKGTLLRAEDVADAVAYLAGDESKY--VSGLNLVIDGG--YTRTNPAF 269 (278)
T ss_dssp TSS------SCCHHHHHHHHHH-------TCSSCSCCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT--GGGCCTHH
T ss_pred hhc------ccchhHHHHhhhc-------ccccccccCCHHHHHHHHHHHcCccccc--CCCCEEEECCc--ccccCCcc
Confidence 211 0111222222211 1112346899999999999998754321 24789999999 88999999
Q ss_pred HHHHHHhh
Q psy7539 298 IENGKDIA 305 (318)
Q Consensus 298 ~~~i~~~~ 305 (318)
++.+.+.+
T Consensus 270 ~~~i~~~~ 277 (278)
T 2bgk_A 270 PTALKHGL 277 (278)
T ss_dssp HHHSCSCC
T ss_pred chhhhhhc
Confidence 99886543
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-18 Score=149.07 Aligned_cols=224 Identities=10% Similarity=-0.036 Sum_probs=143.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+.+.. .. .+.+|++++ +++..++
T Consensus 15 ~~l~~~L~~~--g~~V~~~~r~~~~~------------------------~~------~~~~D~~~~------~~~~~~~ 56 (255)
T 2dkn_A 15 AALKELLARA--GHTVIGIDRGQADI------------------------EA------DLSTPGGRE------TAVAAVL 56 (255)
T ss_dssp HHHHHHHHHT--TCEEEEEESSSSSE------------------------EC------CTTSHHHHH------HHHHHHH
T ss_pred HHHHHHHHhC--CCEEEEEeCChhHc------------------------cc------cccCCcccH------HHHHHHH
Confidence 3789999998 99999999964321 10 157788765 5677666
Q ss_pred c----CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCc---ccccccCCCCC
Q psy7539 81 E----TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEK---VLEEKTYPPPV 150 (318)
Q Consensus 81 ~----~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~---~~~E~~~~~p~ 150 (318)
+ ++|+|||+||......++...+++|+.|+.++++++.+. .+.++||++||..+++... +..|.
T Consensus 57 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~------ 130 (255)
T 2dkn_A 57 DRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEA------ 130 (255)
T ss_dssp HHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHH------
T ss_pred HHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhh------
Confidence 5 899999999986544557789999999999999987653 2458999999988875421 01110
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
....+.+......... ......|+.||.+.|.++..+.. .|++++++||+.++|+...
T Consensus 131 --------~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~--------- 192 (255)
T 2dkn_A 131 --------MLAGDEARAIELAEQQ-GQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ--------- 192 (255)
T ss_dssp --------HHHTCHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH---------
T ss_pred --------hcccchhhhhhhcccc-CCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh---------
Confidence 0000000000000000 00117899999999999988764 4899999999988774211
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHH
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYD 296 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~e 296 (318)
.++.....+...... .+ ....+++++|+|++++.++..+... ..++.|+++++ ..++++|
T Consensus 193 ----~~~~~~~~~~~~~~~-~~-~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gg--~~~~~~e 252 (255)
T 2dkn_A 193 ----ASKADPRYGESTRRF-VA-PLGRGSEPREVAEAIAFLLGPQASF--IHGSVLFVDGG--MDALMRA 252 (255)
T ss_dssp ----HHHHCTTTHHHHHSC-CC-TTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT--HHHHHCT
T ss_pred ----hcccchhhHHHHHHH-HH-HhcCCCCHHHHHHHHHHHhCCCccc--ceeeEEEecCC--eEeeeec
Confidence 010000000000000 02 4457999999999999999876321 13789999988 6666543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=145.39 Aligned_cols=225 Identities=12% Similarity=0.061 Sum_probs=149.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... +.+. .....+++++.+|++++ +++..++
T Consensus 19 ~~~a~~l~~~--G~~V~~~~r~~~~~---~~~~-----------------~~~~~~~~~~~~Dv~~~------~~~~~~~ 70 (281)
T 3m1a_A 19 RAIAEAAVAA--GDTVIGTARRTEAL---DDLV-----------------AAYPDRAEAISLDVTDG------ERIDVVA 70 (281)
T ss_dssp HHHHHHHHHT--TCEEEEEESSGGGG---HHHH-----------------HHCTTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHHH---HHHH-----------------HhccCCceEEEeeCCCH------HHHHHHH
Confidence 3789999998 99999999964321 1111 12235789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHH----HHHHHHHHHhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRG----TRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~g----t~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...+++|+.| +..++..+++. +..+||++||..+....
T Consensus 71 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~---- 145 (281)
T 3m1a_A 71 ADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVVNISSFGGQLSF---- 145 (281)
T ss_dssp HHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCC----
T ss_pred HHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEcCccccCCC----
Confidence 5 78999999997522 23456789999999 55555555663 67899999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+. ..|+.||.+.|.+.+.+.. +|++++++|||.+.++...+
T Consensus 146 -----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 191 (281)
T 3m1a_A 146 -----AGF-----------------------------SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGK 191 (281)
T ss_dssp -----TTC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCC
T ss_pred -----CCc-----------------------------hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccc
Confidence 111 7899999999999887765 58999999999997754332
Q ss_pred CCCc-ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHH
Q psy7539 219 LPGW-TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 297 (318)
Q Consensus 219 ~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el 297 (318)
.... ...... +........ ..........+++++|+|++++.++..+.. +..|+++++ ....+.+.
T Consensus 192 ~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~dva~a~~~~~~~~~~-----~~~~~l~s~--~~~~i~g~ 258 (281)
T 3m1a_A 192 GAAYFSEENPA---YAEKVGPTR---QLVQGSDGSQPGDPAKAAAAIRLALDTEKT-----PLRLALGGD--AVDFLTGH 258 (281)
T ss_dssp CCEEECCBCTT---THHHHHHHH---HHHHC-----CBCHHHHHHHHHHHHHSSSC-----CSEEEESHH--HHHHHHHH
T ss_pred cccccCCcchh---hHHHhHHHH---HHHhhccCCCCCCHHHHHHHHHHHHhCCCC-----CeEEecCch--HHHHHHHH
Confidence 1110 001111 111110000 001122344678899999999999988765 679999988 66677777
Q ss_pred HHHHHHhh
Q psy7539 298 IENGKDIA 305 (318)
Q Consensus 298 ~~~i~~~~ 305 (318)
...+.+.+
T Consensus 259 ~~~i~~~~ 266 (281)
T 3m1a_A 259 LDSVRAEL 266 (281)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76666554
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-16 Score=137.44 Aligned_cols=210 Identities=9% Similarity=0.007 Sum_probs=144.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+. + .....++.++.+|++++ +++..++
T Consensus 25 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~--------~------~~~~~~~~~~~~D~~~~------~~~~~~~ 79 (255)
T 1fmc_A 25 KEIAITFATA--GASVVVSDINAD---AANHVVDE--------I------QQLGGQAFACRCDITSE------QELSALA 79 (255)
T ss_dssp HHHHHHHHTT--TCEEEEEESCHH---HHHHHHHH--------H------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCHH---HHHHHHHH--------H------HHhCCceEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999532 11111111 1 11234788999999986 5677666
Q ss_pred c-------CccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..++...
T Consensus 80 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------ 153 (255)
T 1fmc_A 80 DFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN------ 153 (255)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC------
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC------
Confidence 5 89999999997532 2345678999999999999887521 256899999998765421
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+. ..|+.||.+.|.+++.+.. .+++++++|||.++++....
T Consensus 154 ---~~~-----------------------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~-- 199 (255)
T 1fmc_A 154 ---INM-----------------------------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-- 199 (255)
T ss_dssp ---TTC-----------------------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT--
T ss_pred ---CCC-----------------------------cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh--
Confidence 111 7899999999999988765 48999999999998753211
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeH
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITW 294 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~ 294 (318)
... ..+......+. ....+++++|+|++++.++...... ..+++|+++++ ...|+
T Consensus 200 -----~~~-~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gg--~~~s~ 254 (255)
T 1fmc_A 200 -----VIT-PEIEQKMLQHT---------PIRRLGQPQDIANAALFLCSPAASW--VSGQILTVSGG--GVQEL 254 (255)
T ss_dssp -----TCC-HHHHHHHHHTC---------SSCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT--SCCCC
T ss_pred -----ccC-hHHHHHHHhcC---------CcccCCCHHHHHHHHHHHhCCcccc--CCCcEEEECCc--eeccC
Confidence 111 12222222221 1235789999999999998764321 13789999988 66553
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.3e-16 Score=132.92 Aligned_cols=187 Identities=14% Similarity=0.062 Sum_probs=130.7
Q ss_pred ChhHHHHH-hhCCCcEEEEEEccCC-CCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH
Q psy7539 1 KVLLEKIL-RTCENVKIYILLRPKK-NKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 1 ~~l~~~Ll-~~~~~~~V~~l~R~~~-~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~ 78 (318)
++++++|+ +. |++|+++.|+.. ... ++ .....+++++.+|++++ +++..
T Consensus 19 ~~~~~~l~~~~--g~~V~~~~r~~~~~~~------~~---------------~~~~~~~~~~~~D~~d~------~~~~~ 69 (221)
T 3r6d_A 19 QXLTATLLTYT--DMHITLYGRQLKTRIP------PE---------------IIDHERVTVIEGSFQNP------GXLEQ 69 (221)
T ss_dssp HHHHHHHHHHC--CCEEEEEESSHHHHSC------HH---------------HHTSTTEEEEECCTTCH------HHHHH
T ss_pred HHHHHHHHhcC--CceEEEEecCccccch------hh---------------ccCCCceEEEECCCCCH------HHHHH
Confidence 36889999 66 999999999632 211 11 00235789999999986 68999
Q ss_pred HhcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc-ccccccCCCCCChhHHHH
Q psy7539 79 LSETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK-VLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 79 ~~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~-~~~E~~~~~p~~~~~~~~ 157 (318)
+++++|+|||+||.. |+. +.+++++|++. ++++||++||.+++.... ...+
T Consensus 70 ~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~~~~~~-------------- 121 (221)
T 3r6d_A 70 AVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFPVALEK-------------- 121 (221)
T ss_dssp HHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSCHHHHH--------------
T ss_pred HHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCCccccc--------------
Confidence 999999999999863 444 99999999985 889999999988765421 0000
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCC-chhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 158 KAELLSKNELELLKQELLQDFPN-GYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
+ ..+ ... .|+.+|...|.++... +++++++|||.+++.....
T Consensus 122 ---~--------~~~-----~~~~~y~~~K~~~e~~~~~~---~i~~~~vrpg~v~~~~~~~------------------ 164 (221)
T 3r6d_A 122 ---W--------TFD-----NLPISYVQGERQARNVLRES---NLNYTILRLTWLYNDPEXT------------------ 164 (221)
T ss_dssp ---H--------HHH-----TSCHHHHHHHHHHHHHHHHS---CSEEEEEEECEEECCTTCC------------------
T ss_pred ---c--------ccc-----ccccHHHHHHHHHHHHHHhC---CCCEEEEechhhcCCCCCc------------------
Confidence 0 000 013 8999999999998754 8999999999998752110
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHHHHHh--hhccCCCCCCCcEEEeeCC
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGVLLST--WNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~--~~~~~~~~~~~~~~ni~~~ 287 (318)
..............+++.+|+|++++.++ ..+... ..+.+.++++
T Consensus 165 ---~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~---~~~~~~i~~~ 211 (221)
T 3r6d_A 165 ---DYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPF---HRTSIGVGEP 211 (221)
T ss_dssp ---CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGG---TTEEEEEECT
T ss_pred ---ceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhh---hcceeeecCC
Confidence 00111111112234899999999999999 665531 3678888765
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-16 Score=138.87 Aligned_cols=225 Identities=16% Similarity=0.057 Sum_probs=150.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .....++.++.+|++++ +++..++
T Consensus 40 ~~la~~L~~~--G~~V~~~~r~~~---~~~~~~~~l~-------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 95 (302)
T 1w6u_A 40 KGMTTLLSSL--GAQCVIASRKMD---VLKATAEQIS-------------SQTGNKVHAIQCDVRDP------DMVQNTV 95 (302)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH-------------HHHSSCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHH-------------HhcCCceEEEEeCCCCH------HHHHHHH
Confidence 3688999998 999999999532 1111111110 11135789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||.+++...
T Consensus 96 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~---- 171 (302)
T 1w6u_A 96 SELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS---- 171 (302)
T ss_dssp HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC----
Confidence 4 46999999996422 2345678999999999998887532 245799999998764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+ ...|+.||.+.|.+.+.+.. .|++++++|||.+.++....
T Consensus 172 -----~~-----------------------------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~ 217 (302)
T 1w6u_A 172 -----GF-----------------------------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS 217 (302)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred -----CC-----------------------------cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhh
Confidence 11 16899999999999988754 58999999999997742110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHH
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDII 298 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~ 298 (318)
...........+..+ .....+++++|+|++++.++...... ..+..|++.++ ..+++++++
T Consensus 218 ------~~~~~~~~~~~~~~~---------~p~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gg--~~~~~~~~~ 278 (302)
T 1w6u_A 218 ------RLDPTGTFEKEMIGR---------IPCGRLGTVEELANLAAFLCSDYASW--INGAVIKFDGG--EEVLISGEF 278 (302)
T ss_dssp -------CCTTSHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT--HHHHHHSTT
T ss_pred ------hcccchhhHHHHHhc---------CCcCCCCCHHHHHHHHHHHcCCcccc--cCCCEEEECCC--eeeccCCcc
Confidence 111111111122221 11235789999999999998754321 13789999998 788888888
Q ss_pred HHHHHhhc
Q psy7539 299 ENGKDIAR 306 (318)
Q Consensus 299 ~~i~~~~~ 306 (318)
+.+.+..|
T Consensus 279 ~~~~~~~g 286 (302)
T 1w6u_A 279 NDLRKVTK 286 (302)
T ss_dssp GGGGGCCH
T ss_pred ccchhhcc
Confidence 77766653
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.70 E-value=7e-16 Score=131.33 Aligned_cols=186 Identities=10% Similarity=0.011 Sum_probs=125.1
Q ss_pred ChhHHHHHhhCCC-cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCEN-VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~-~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ | ++|+++.|+.+... .....+++++.+|++++ +++..+
T Consensus 37 ~~l~~~L~~~--G~~~V~~~~R~~~~~~-----------------------~~~~~~~~~~~~Dl~d~------~~~~~~ 85 (236)
T 3qvo_A 37 RHVINQLADK--QTIKQTLFARQPAKIH-----------------------KPYPTNSQIIMGDVLNH------AALKQA 85 (236)
T ss_dssp HHHHHHHTTC--TTEEEEEEESSGGGSC-----------------------SSCCTTEEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHhC--CCceEEEEEcChhhhc-----------------------ccccCCcEEEEecCCCH------HHHHHH
Confidence 3688999988 8 89999999754321 11234789999999986 689999
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcc-cccccCCCCCChhHHHHH
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKV-LEEKTYPPPVSPHNVIEK 158 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~-~~E~~~~~p~~~~~~~~~ 158 (318)
++++|+|||+|+.... ...+.+++++|++. ++++||++||.++++.... ..+....
T Consensus 86 ~~~~D~vv~~a~~~~~-----------~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~~~~~~~~~----------- 142 (236)
T 3qvo_A 86 MQGQDIVYANLTGEDL-----------DIQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPGKFVEWNNA----------- 142 (236)
T ss_dssp HTTCSEEEEECCSTTH-----------HHHHHHHHHHHHHT-TCCEEEEECCCCC-------------------------
T ss_pred hcCCCEEEEcCCCCch-----------hHHHHHHHHHHHHc-CCCEEEEEecceecCCCCcccccchhh-----------
Confidence 9999999999986321 13467899999985 8899999999888764220 0000000
Q ss_pred HhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhc
Q psy7539 159 AELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGK 238 (318)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (318)
....+...|..+|+.+.. .|++++++|||.+++......
T Consensus 143 -------------------~~~~~~~~~~~~~~~l~~---~gi~~~~vrPg~i~~~~~~~~------------------- 181 (236)
T 3qvo_A 143 -------------------VIGEPLKPFRRAADAIEA---SGLEYTILRPAWLTDEDIIDY------------------- 181 (236)
T ss_dssp ---------------------CGGGHHHHHHHHHHHT---SCSEEEEEEECEEECCSCCCC-------------------
T ss_pred -------------------cccchHHHHHHHHHHHHH---CCCCEEEEeCCcccCCCCcce-------------------
Confidence 003344455566666543 489999999999987532110
Q ss_pred CceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 239 GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
............+++++|+|++++.++..+... .++.|+++++
T Consensus 182 ---~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~---~g~~~~i~~~ 224 (236)
T 3qvo_A 182 ---ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKH---IGENIGINQP 224 (236)
T ss_dssp ---EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTT---TTEEEEEECS
T ss_pred ---EEeccCCCCCCcEECHHHHHHHHHHHHcCcccc---cCeeEEecCC
Confidence 111111112236899999999999999887632 3789999987
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=8.4e-16 Score=131.30 Aligned_cols=202 Identities=13% Similarity=0.112 Sum_probs=139.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++.+.. . ...+++++.+|++++ +++..++
T Consensus 21 ~~~a~~l~~~--G~~V~~~~r~~~------~~~~~~--------------~-~~~~~~~~~~D~~~~------~~~~~~~ 71 (244)
T 1cyd_A 21 RDTVKALHAS--GAKVVAVTRTNS------DLVSLA--------------K-ECPGIEPVCVDLGDW------DATEKAL 71 (244)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHH--------------H-HSTTCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------H-hccCCCcEEecCCCH------HHHHHHH
Confidence 3689999998 999999999531 222111 1 113567889999986 6788777
Q ss_pred c---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccccccC
Q psy7539 81 E---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 81 ~---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+ ..+||++||..++...
T Consensus 72 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 143 (244)
T 1cyd_A 72 GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-------- 143 (244)
T ss_dssp TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC--------
Confidence 6 48999999996432 2345678999999999999887653 13 5789999998765431
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCc
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
++. ..|+.||.+.|.+++.+.. .+++++++||+.++++....
T Consensus 144 -~~~-----------------------------~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~---- 189 (244)
T 1cyd_A 144 -PNL-----------------------------ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK---- 189 (244)
T ss_dssp -TTB-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH----
T ss_pred -CCc-----------------------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccc----
Confidence 011 6899999999999988764 48999999999998753210
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
......++..+..+ .....+++++|+|++++.++..+... ..+..+++.++
T Consensus 190 ---~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gG 240 (244)
T 1cyd_A 190 ---VSADPEFARKLKER---------HPLRKFAEVEDVVNSILFLLSDRSAS--TSGGGILVDAG 240 (244)
T ss_dssp ---HTCCHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGGTT--CCSSEEEESTT
T ss_pred ---cccCHHHHHHHHhc---------CCccCCCCHHHHHHHHHHHhCchhhc--ccCCEEEECCC
Confidence 00011222222221 12368999999999999999765421 24778888876
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.7e-15 Score=132.05 Aligned_cols=232 Identities=9% Similarity=0.008 Sum_probs=139.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .. .....++.++.+|++++ +++..++
T Consensus 20 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~--------~~---~~~~~~~~~~~~D~~~~------~~~~~~~ 77 (278)
T 1spx_A 20 RATAVLFARE--GAKVTITGRHAE---RLEETRQQIL--------AA---GVSEQNVNSVVADVTTD------AGQDEIL 77 (278)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH--------HT---TCCGGGEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHH--------hc---ccCCCceeEEecccCCH------HHHHHHH
Confidence 3688999998 999999999531 1111111110 00 01124788999999986 5677666
Q ss_pred c-------CccEEEEcccccC-----------cchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEecccc-ccCC
Q psy7539 81 E-------TIHIVYHIAATVR-----------FDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYC-HPKE 138 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~-----------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~-~~~~ 138 (318)
+ ++|+|||+||... ....++..+++|+.|+.++++++... .+ .+||++||..+ +...
T Consensus 78 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~ 156 (278)
T 1spx_A 78 STTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT 156 (278)
T ss_dssp HHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC
T ss_pred HHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC
Confidence 5 8999999999742 22345578999999999999988653 13 79999999765 3321
Q ss_pred cccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccc
Q psy7539 139 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPI 214 (318)
Q Consensus 139 ~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~ 214 (318)
++. ..|+.||.+.+.+.+.+.. +|++++++|||.+.++
T Consensus 157 ---------~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 198 (278)
T 1spx_A 157 ---------PDF-----------------------------PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG 198 (278)
T ss_dssp ---------TTS-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred ---------CCc-----------------------------cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCc
Confidence 011 6899999999999887653 5899999999999775
Q ss_pred cCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeH
Q psy7539 215 WKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITW 294 (318)
Q Consensus 215 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~ 294 (318)
.....................+... . ....+++++|+|++++.++..+... ...+.+|++.++ ...++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~----~-----p~~~~~~~~dvA~~v~~l~s~~~~~-~~tG~~~~vdgG--~~~~~ 266 (278)
T 1spx_A 199 FGSAMGMPEETSKKFYSTMATMKEC----V-----PAGVMGQPQDIAEVIAFLADRKTSS-YIIGHQLVVDGG--SSLIM 266 (278)
T ss_dssp C--------------HHHHHHHHHH----C-----TTSSCBCHHHHHHHHHHHHCHHHHT-TCCSCEEEESTT--GGGC-
T ss_pred cccccccCchhhhhhhHHHHHHHhc----C-----CCcCCCCHHHHHHHHHHHcCccccC-cccCcEEEECCC--ccccc
Confidence 3211000000000000001111110 0 1125889999999999988754310 013789999999 88999
Q ss_pred HHHHHHHHHhh
Q psy7539 295 YDIIENGKDIA 305 (318)
Q Consensus 295 ~el~~~i~~~~ 305 (318)
.++++.+.+..
T Consensus 267 ~~~~~~~~~~~ 277 (278)
T 1spx_A 267 GLHCQDFAKLL 277 (278)
T ss_dssp -----------
T ss_pred CcccccHHHHh
Confidence 99999887653
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.2e-15 Score=128.93 Aligned_cols=208 Identities=14% Similarity=0.057 Sum_probs=139.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+. + .....+++++.+|++++ +++..++
T Consensus 27 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~--------l------~~~~~~~~~~~~D~~~~------~~~~~~~ 81 (260)
T 3awd_A 27 LACVTALAEA--GARVIIADLDEA---MATKAVED--------L------RMEGHDVSSVVMDVTNT------ESVQNAV 81 (260)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHH--------H------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHH--------H------HhcCCceEEEEecCCCH------HHHHHHH
Confidence 3688999998 999999999532 11111111 1 11234789999999986 5666665
Q ss_pred c-------CccEEEEcccccC-c-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVR-F-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||... . ...+...+++|+.|+.++++++... .+..+||++||.++.....
T Consensus 82 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--- 158 (260)
T 3awd_A 82 RSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNR--- 158 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS---
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCC---
Confidence 4 7899999999643 1 1234578999999999999887642 2567999999987643211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
..|. ..|+.||.+.|.++..+.. +|++++++|||.++++....
T Consensus 159 ----~~~~-----------------------------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~ 205 (260)
T 3awd_A 159 ----PQQQ-----------------------------AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF 205 (260)
T ss_dssp ----SSCC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH
T ss_pred ----CCCc-----------------------------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc
Confidence 0111 6899999999999987654 58999999999998743210
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ..+...+..+. ....+++++|+|++++.++...... ..+..|++.++
T Consensus 206 ------~~~~-~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gg 256 (260)
T 3awd_A 206 ------GMEK-PELYDAWIAGT---------PMGRVGQPDEVASVVQFLASDAASL--MTGAIVNVDAG 256 (260)
T ss_dssp ------HHTC-HHHHHHHHHTC---------TTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------ccCC-hHHHHHHHhcC---------CcCCCCCHHHHHHHHHHHhCchhcc--CCCcEEEECCc
Confidence 0001 12222222221 1235889999999999988764321 24789999887
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.2e-17 Score=135.33 Aligned_cols=143 Identities=13% Similarity=0.048 Sum_probs=110.0
Q ss_pred EEEeccCCCCCCCCCHHHHHHHhc---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcCCCccEE
Q psy7539 58 IPINGDVAVPDLGISAEDRQMLSE---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFV 127 (318)
Q Consensus 58 ~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v 127 (318)
+++.+|++++ +++..+++ ++|+|||+||.... ...+...+++|+.|+.++++++.+. +..+||
T Consensus 45 ~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv 117 (207)
T 2yut_A 45 RALPADLADE------LEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAV 117 (207)
T ss_dssp EECCCCTTSH------HHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEE
T ss_pred cEEEeeCCCH------HHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEE
Confidence 7889999986 67888877 89999999997532 2345678999999999999999663 678999
Q ss_pred EEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcE
Q psy7539 128 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 203 (318)
Q Consensus 128 ~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~ 203 (318)
++||..++... .+. ..|+.||.+.|.+++.+.. .|+++
T Consensus 118 ~~sS~~~~~~~---------~~~-----------------------------~~Y~~sK~a~~~~~~~~~~~~~~~gi~v 159 (207)
T 2yut_A 118 FFGAYPRYVQV---------PGF-----------------------------AAYAAAKGALEAYLEAARKELLREGVHL 159 (207)
T ss_dssp EECCCHHHHSS---------TTB-----------------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred EEcChhhccCC---------CCc-----------------------------chHHHHHHHHHHHHHHHHHHHhhhCCEE
Confidence 99998775321 111 7899999999999988764 48999
Q ss_pred EEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 204 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 204 ~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
+++||+.++++.. . +.+.....+++++|+|++++.++.++..
T Consensus 160 ~~v~pg~v~t~~~---------------------~-------~~~~~~~~~~~~~dva~~~~~~~~~~~~ 201 (207)
T 2yut_A 160 VLVRLPAVATGLW---------------------A-------PLGGPPKGALSPEEAARKVLEGLFREPV 201 (207)
T ss_dssp EEECCCCBCSGGG---------------------G-------GGTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred EEEecCcccCCCc---------------------c-------ccCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 9999998876320 0 1122347899999999999999987654
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-15 Score=130.61 Aligned_cols=209 Identities=11% Similarity=0.044 Sum_probs=141.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++++.. .+...++.++.+|++++ +++..++
T Consensus 22 ~~ia~~l~~~--G~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~D~~~~------~~v~~~~ 73 (259)
T 4e6p_A 22 RAFAEAYVRE--GATVAIADIDIE------RARQAA--------------AEIGPAAYAVQMDVTRQ------DSIDAAI 73 (259)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHH--------------HHHCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------HHhCCCceEEEeeCCCH------HHHHHHH
Confidence 3689999998 999999998521 222111 12235788999999987 5677666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... +...+||++||..++....
T Consensus 74 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--- 150 (259)
T 4e6p_A 74 AATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA--- 150 (259)
T ss_dssp HHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT---
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC---
Confidence 5 79999999997532 2345678899999999999988642 1145899999977643210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+ ...|+.||.+.+.+.+.++. +|+++.+++||.+.++...
T Consensus 151 ------~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~- 194 (259)
T 4e6p_A 151 ------L-----------------------------VAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD- 194 (259)
T ss_dssp ------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH-
T ss_pred ------C-----------------------------ChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh-
Confidence 0 17899999999999988764 5899999999988764211
Q ss_pred CCCcccCCCchHHHHHHHhcC---ceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKG---IIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....++...... ..............+.+++|+|++++.++...... ..+++|++.++
T Consensus 195 ---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~--itG~~i~vdgG 255 (259)
T 4e6p_A 195 ---------GVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDY--IVSQTYNVDGG 255 (259)
T ss_dssp ---------HHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTT--CCSCEEEESTT
T ss_pred ---------hhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCC--CCCCEEEECcC
Confidence 001111111110 00011122334567899999999999888654431 24789999988
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.7e-15 Score=129.63 Aligned_cols=191 Identities=13% Similarity=0.096 Sum_probs=137.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... ...++.++.+|++++ +++..++
T Consensus 42 ~aia~~l~~~--G~~V~~~~r~~~~~--------------------------~~~~~~~~~~Dv~d~------~~v~~~~ 87 (260)
T 3un1_A 42 AGLVRAYRDR--NYRVVATSRSIKPS--------------------------ADPDIHTVAGDISKP------ETADRIV 87 (260)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCCCC--------------------------SSTTEEEEESCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCChhhc--------------------------ccCceEEEEccCCCH------HHHHHHH
Confidence 3688999998 99999999975432 123788999999987 5676666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++. + .+..++|++||..+.....
T Consensus 88 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~iv~isS~~~~~~~~--- 163 (260)
T 3un1_A 88 REGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLK-QGSGHIVSITTSLVDQPMV--- 163 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEEEEECCTTTTSCBT---
T ss_pred HHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCcEEEEEechhhccCCC---
Confidence 5 79999999997522 23456789999999999999873 3 3567999999976643210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
..+. ..|+.||.+.+.+.+.++. +|+++.+++||.|.++....
T Consensus 164 ----~~~~-----------------------------~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~ 210 (260)
T 3un1_A 164 ----GMPS-----------------------------ALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA 210 (260)
T ss_dssp ----TCCC-----------------------------HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG
T ss_pred ----CCcc-----------------------------HHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH
Confidence 1111 6899999999999988765 48999999999997743210
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....... .......+.+++|+|++++.+...... .+++|++.++
T Consensus 211 ------------~~~~~~~---------~~~p~~r~~~~~dva~av~~L~~~~~i----tG~~i~vdGG 254 (260)
T 3un1_A 211 ------------ETHSTLA---------GLHPVGRMGEIRDVVDAVLYLEHAGFI----TGEILHVDGG 254 (260)
T ss_dssp ------------GGHHHHH---------TTSTTSSCBCHHHHHHHHHHHHHCTTC----CSCEEEESTT
T ss_pred ------------HHHHHHh---------ccCCCCCCcCHHHHHHHHHHhcccCCC----CCcEEEECCC
Confidence 0011111 112234678899999999988433332 4889999887
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=5.3e-15 Score=126.33 Aligned_cols=202 Identities=12% Similarity=0.126 Sum_probs=138.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++.+.. . ...+++++.+|++++ +++..++
T Consensus 21 ~~~a~~l~~~--G~~V~~~~r~~~------~~~~~~--------------~-~~~~~~~~~~D~~~~------~~~~~~~ 71 (244)
T 3d3w_A 21 RGTVQALHAT--GARVVAVSRTQA------DLDSLV--------------R-ECPGIEPVCVDLGDW------EATERAL 71 (244)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHH--------------H-HSTTCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------H-HcCCCCEEEEeCCCH------HHHHHHH
Confidence 3688999988 999999999521 222211 1 112567789999986 6788777
Q ss_pred c---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccccccC
Q psy7539 81 E---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 81 ~---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
+ ++|+|||+||.... ...++..+++|+.++.++++++... .+ ..+||++||..++...
T Consensus 72 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 143 (244)
T 3d3w_A 72 GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-------- 143 (244)
T ss_dssp TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC--------
Confidence 5 58999999997532 2345678999999999999887652 13 5789999997765321
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCc
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
.+. ..|+.||.+.|.+++.+.. .+++++++|||.++++..... +
T Consensus 144 -~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~ 191 (244)
T 3d3w_A 144 -TNH-----------------------------SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT--W 191 (244)
T ss_dssp -TTB-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHH--S
T ss_pred -CCC-----------------------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhh--c
Confidence 111 7899999999999988754 489999999999987432100 0
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..+ .....+..+ .....+++++|+|++++.++...... ..++.|++.++
T Consensus 192 ----~~~-~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gG 240 (244)
T 3d3w_A 192 ----SDP-HKAKTMLNR---------IPLGKFAEVEHVVNAILFLLSDRSGM--TTGSTLPVEGG 240 (244)
T ss_dssp ----CST-THHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ----cCh-HHHHHHHhh---------CCCCCCcCHHHHHHHHHHHcCccccC--CCCCEEEECCC
Confidence 000 111112111 12247899999999999999764321 13789999887
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=2.8e-15 Score=127.82 Aligned_cols=191 Identities=14% Similarity=0.079 Sum_probs=137.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+.. ..++.++.+|++++ +++..++
T Consensus 16 ~~la~~l~~~--G~~V~~~~r~~~-----------------------------~~~~~~~~~D~~~~------~~~~~~~ 58 (242)
T 1uay_A 16 RAAALALKAR--GYRVVVLDLRRE-----------------------------GEDLIYVEGDVTRE------EDVRRAV 58 (242)
T ss_dssp HHHHHHHHHH--TCEEEEEESSCC-----------------------------SSSSEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEccCcc-----------------------------ccceEEEeCCCCCH------HHHHHHH
Confidence 3689999999 999999999643 13567899999986 5777776
Q ss_pred c------CccEEEEcccccCcc-----------hhHHHHHHHhHHHHHHHHHHHHhc-CC--------CccEEEEecccc
Q psy7539 81 E------TIHIVYHIAATVRFD-----------DYMQTYVFLNTRGTRDMLNLSKQM-IH--------LQLFVYVSTAYC 134 (318)
Q Consensus 81 ~------~~d~Vih~Aa~~~~~-----------~~~~~~~~~Nv~gt~~ll~~a~~~-~~--------~~~~v~~SS~~~ 134 (318)
+ ++|+|||+||..... ..+...+++|+.++.++++++... .. ..+||++||..+
T Consensus 59 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 138 (242)
T 1uay_A 59 ARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA 138 (242)
T ss_dssp HHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH
T ss_pred HHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhh
Confidence 6 789999999975321 156678999999999999988753 11 128999999876
Q ss_pred ccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccc
Q psy7539 135 HPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSI 210 (318)
Q Consensus 135 ~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~ 210 (318)
+... .+ ...|+.||.+.+.+.+.+.. .|++++++|||.
T Consensus 139 ~~~~---------~~-----------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~ 180 (242)
T 1uay_A 139 FEGQ---------IG-----------------------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGL 180 (242)
T ss_dssp HHCC---------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred ccCC---------CC-----------------------------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEecc
Confidence 5421 11 17899999999998877654 489999999999
Q ss_pred cccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 211 IIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 211 v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
++++.... .. ..+...+.... + ....+++++|+|++++.++..... .++.|++.++
T Consensus 181 v~t~~~~~-------~~--~~~~~~~~~~~-~-------~~~~~~~~~dva~~~~~l~~~~~~----~G~~~~v~gG 236 (242)
T 1uay_A 181 FDTPLLQG-------LP--EKAKASLAAQV-P-------FPPRLGRPEEYAALVLHILENPML----NGEVVRLDGA 236 (242)
T ss_dssp CSSHHHHT-------SC--HHHHHHHHTTC-C-------SSCSCCCHHHHHHHHHHHHHCTTC----CSCEEEESTT
T ss_pred Ccchhhhc-------cc--hhHHHHHHhhC-C-------CcccCCCHHHHHHHHHHHhcCCCC----CCcEEEEcCC
Confidence 98753211 11 11222222211 0 013478999999999999887332 4889999887
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=5e-15 Score=129.37 Aligned_cols=221 Identities=15% Similarity=0.067 Sum_probs=143.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC------CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK------NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAE 74 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~------~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~ 74 (318)
++++++|+++ |++|+++.|++... ...+.+.+... .+ .....++.++.+|++++ +
T Consensus 24 ~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~Dv~~~------~ 84 (281)
T 3s55_A 24 RSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVA-----LV------EKTGRRCISAKVDVKDR------A 84 (281)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHH-----HH------HHTTCCEEEEECCTTCH------H
T ss_pred HHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHH-----HH------HhcCCeEEEEeCCCCCH------H
Confidence 3688999998 99999999974321 11222222211 00 22245789999999986 5
Q ss_pred HHHHHhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccC
Q psy7539 75 DRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPK 137 (318)
Q Consensus 75 ~~~~~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~ 137 (318)
++..+++ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++..
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 164 (281)
T 3s55_A 85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA 164 (281)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence 6666654 79999999997531 2345678999999999999986431 24568999999876532
Q ss_pred CcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 138 EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 138 ~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
. .+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.+
T Consensus 165 ~---------~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t 206 (281)
T 3s55_A 165 N---------FA-----------------------------QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIET 206 (281)
T ss_dssp C---------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCS
T ss_pred C---------CC-----------------------------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccC
Confidence 1 11 17899999999999887765 589999999999987
Q ss_pred ccCCCCC---CcccCCCch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 214 IWKDPLP---GWTDNINGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 214 ~~~~~~~---g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+...... .+......+ ..-..... ......+..+.+++|+|++++.++...... ..+.++++.++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~--itG~~i~vdgG 275 (281)
T 3s55_A 207 PMTHNDFVFGTMRPDLEKPTLKDVESVF-------ASLHLQYAPFLKPEEVTRAVLFLVDEASSH--ITGTVLPIDAG 275 (281)
T ss_dssp TTTSSHHHHHC-------CCHHHHHHHH-------HHHCSSSCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ccccchhhhccccccccccchhHHHHHH-------HhhhccCcCCCCHHHHHHHHHHHcCCcccC--CCCCEEEECCC
Confidence 5432100 000000000 00000000 011223367899999999999998765431 24889999988
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-15 Score=133.17 Aligned_cols=227 Identities=15% Similarity=0.046 Sum_probs=151.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .. .....++.++.+|++++ +++..++
T Consensus 25 ~aia~~l~~~--G~~V~~~~r~~~---~~~~~~~~l~--------~~---~~~~~~~~~~~~Dv~~~------~~v~~~~ 82 (281)
T 3svt_A 25 KGVAAGLVAA--GASVMIVGRNPD---KLAGAVQELE--------AL---GANGGAIRYEPTDITNE------DETARAV 82 (281)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH--------TT---CCSSCEEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHH--------Hh---CCCCceEEEEeCCCCCH------HHHHHHH
Confidence 3688999998 999999998532 1111111111 00 11123789999999986 5666655
Q ss_pred c-------CccEEEEcccccC--------cchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVR--------FDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||... ....++..+++|+.|+.++++++... .+-.+||++||..++...
T Consensus 83 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 158 (281)
T 3svt_A 83 DAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH---- 158 (281)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC----
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC----
Confidence 4 6899999999721 11335678999999999999987653 133489999997765321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++....
T Consensus 159 -----~~-----------------------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 204 (281)
T 3svt_A 159 -----RW-----------------------------FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAA 204 (281)
T ss_dssp -----TT-----------------------------CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred -----CC-----------------------------ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh
Confidence 01 17899999999999987765 57999999999886642110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee-HHHH
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT-WYDI 297 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~-~~el 297 (318)
..........+... .....+.+++|+|++++.++...... ..+++|++.++ ...+ ..++
T Consensus 205 -------~~~~~~~~~~~~~~---------~p~~r~~~~~dva~~~~~l~s~~~~~--itG~~~~vdgG--~~~~~~~~~ 264 (281)
T 3svt_A 205 -------ITESAELSSDYAMC---------TPLPRQGEVEDVANMAMFLLSDAASF--VTGQVINVDGG--QMLRRGPDF 264 (281)
T ss_dssp -------HHTCHHHHHHHHHH---------CSSSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT--GGGSCCCCC
T ss_pred -------cccCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCcccCC--CCCCEEEeCCC--hhcccCCcc
Confidence 00011122222211 11235678999999999988765431 24889999888 6665 7788
Q ss_pred HHHHHHhhcc
Q psy7539 298 IENGKDIARN 307 (318)
Q Consensus 298 ~~~i~~~~~~ 307 (318)
.+.+.+.+|.
T Consensus 265 ~~~~~~~~~~ 274 (281)
T 3svt_A 265 SAMLEPVFGR 274 (281)
T ss_dssp HHHHHHHHCT
T ss_pred hhccccccCC
Confidence 8888888843
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-15 Score=129.52 Aligned_cols=205 Identities=15% Similarity=0.054 Sum_probs=136.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .....++.++.+|++++ +++..++
T Consensus 21 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~~~D~~~~------~~~~~~~ 76 (248)
T 2pnf_A 21 RAIAEKLASA--GSTVIITGTSGE---RAKAVAEEIA-------------NKYGVKAHGVEMNLLSE------ESINKAF 76 (248)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHH---HHHHHHHHHH-------------HHHCCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCChH---HHHHHHHHHH-------------hhcCCceEEEEccCCCH------HHHHHHH
Confidence 3688999998 999999999532 1111211110 11234788999999976 5777766
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..+....
T Consensus 77 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----- 151 (248)
T 2pnf_A 77 EEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN----- 151 (248)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-----
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-----
Confidence 5 79999999997532 2345678999999997776655321 256899999997553210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+. ..|+.||.+.|.+...+.. .+++++++|||.+.++...
T Consensus 152 ----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~-- 196 (248)
T 2pnf_A 152 ----VGQ-----------------------------VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA-- 196 (248)
T ss_dssp ----TTC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG--
T ss_pred ----CCC-----------------------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh--
Confidence 011 6899999999998887654 4899999999998774321
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+ . ..+...+... .....+++++|+|++++.++...... ..+++|++.++
T Consensus 197 -----~~-~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gg 246 (248)
T 2pnf_A 197 -----VL-S-EEIKQKYKEQ---------IPLGRFGSPEEVANVVLFLCSELASY--ITGEVIHVNGG 246 (248)
T ss_dssp -----GS-C-HHHHHHHHHT---------CTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hc-c-HHHHHHHHhc---------CCCCCccCHHHHHHHHHHHhCchhhc--CCCcEEEeCCC
Confidence 11 1 1111111111 11235889999999999998764321 14789999876
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.3e-15 Score=128.42 Aligned_cols=218 Identities=11% Similarity=0.070 Sum_probs=135.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+...... . .....++.++.+|++++ +++..++
T Consensus 21 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~D~~~~------~~~~~~~ 82 (264)
T 2pd6_A 21 RAVSVRLAGE--GATVAACDLDRA---AAQETVRLLGGPGSK-----E--GPPRGNHAAFQADVSEA------RAARCLL 82 (264)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHH---HHHHHHHTC-------------------CCEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCChH---HHHHHHHHHHhcCcc-----c--cccCcceEEEEecCCCH------HHHHHHH
Confidence 3688999998 999999999532 111111111000000 0 00014788999999986 5666665
Q ss_pred cC-------c-cEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCccc
Q psy7539 81 ET-------I-HIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~~-------~-d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~ 141 (318)
++ + |+|||+||.... ...+...+++|+.|+.++++++... .+ ..+||++||.++....
T Consensus 83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 159 (264)
T 2pd6_A 83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN--- 159 (264)
T ss_dssp HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC---
T ss_pred HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC---
Confidence 53 4 999999997532 2345678999999999999988753 12 4689999997654221
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.+. ..|+.||.+.|.+.+.+.. .|++++++|||.++++...
T Consensus 160 ------~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 204 (264)
T 2pd6_A 160 ------VGQ-----------------------------TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ 204 (264)
T ss_dssp ------TTB-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--
T ss_pred ------CCC-----------------------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh
Confidence 011 7899999999998877654 5899999999999875422
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHH
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYD 296 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~e 296 (318)
.. ...+...+.. ......+++++|+|++++.++..... ...+..+++.++ ..++...
T Consensus 205 ~~---------~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~v~gg--~~~~~~~ 261 (264)
T 2pd6_A 205 KV---------PQKVVDKITE---------MIPMGHLGDPEDVADVVAFLASEDSG--YITGTSVEVTGG--LFMAENL 261 (264)
T ss_dssp -----------------CTGG---------GCTTCSCBCHHHHHHHHHHHHSGGGT--TCCSCEEEESTT--C------
T ss_pred hc---------CHHHHHHHHH---------hCCCCCCCCHHHHHHHHHHHcCCccc--CCCCCEEEECCC--ceecccc
Confidence 11 0001110111 01123578999999999999876432 124789999988 5554433
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=6.8e-15 Score=127.15 Aligned_cols=211 Identities=13% Similarity=0.069 Sum_probs=141.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.++++ .....++.++.+|++++ +++..++
T Consensus 24 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~l---------------~~~~~~~~~~~~D~~~~------~~v~~~~ 77 (261)
T 2wyu_A 24 FAIAAKLKEA--GAEVALSYQAER---LRPEAEKL---------------AEALGGALLFRADVTQD------EELDALF 77 (261)
T ss_dssp HHHHHHHHHH--TCEEEEEESCGG---GHHHHHHH---------------HHHTTCCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCHH---HHHHHHHH---------------HHhcCCcEEEECCCCCH------HHHHHHH
Confidence 3688999999 999999999642 22233322 11112478899999986 5666665
Q ss_pred c-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhcC-CCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++...- ...+||++||..+....
T Consensus 78 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--- 154 (261)
T 2wyu_A 78 AGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV--- 154 (261)
T ss_dssp HHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC---
T ss_pred HHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC---
Confidence 4 78999999997532 23456789999999999999998631 12489999997664310
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
++ ...|+.||.+.+.+.+.+.. +|+++.+++||.|.++...
T Consensus 155 ------~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 199 (261)
T 2wyu_A 155 ------PK-----------------------------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAAR 199 (261)
T ss_dssp ------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGG
T ss_pred ------CC-----------------------------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhh
Confidence 01 16899999999999887765 4899999999999775321
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHH
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 295 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~ 295 (318)
.......+...+.... ....+.+++|+|++++.++...... ..+..|++.++ ...+..
T Consensus 200 -------~~~~~~~~~~~~~~~~---------p~~~~~~~~dva~~v~~l~s~~~~~--~tG~~~~vdgG--~~~~~~ 257 (261)
T 2wyu_A 200 -------SIPGFTKMYDRVAQTA---------PLRRNITQEEVGNLGLFLLSPLASG--ITGEVVYVDAG--YHIMGM 257 (261)
T ss_dssp -------GCTTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT--GGGBC-
T ss_pred -------hccccHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcChhhcC--CCCCEEEECCC--ccccCC
Confidence 1111112222222110 1124678999999999988654321 24789999888 555433
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.64 E-value=6.4e-15 Score=127.53 Aligned_cols=204 Identities=11% Similarity=0.038 Sum_probs=126.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+. + .....++.++.+|++++ +++..++
T Consensus 28 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~--------~------~~~~~~~~~~~~D~~~~------~~~~~~~ 82 (266)
T 1xq1_A 28 HAIVEEFAGF--GAVIHTCARNEY---ELNECLSK--------W------QKKGFQVTGSVCDASLR------PEREKLM 82 (266)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHH--------H------HHTTCCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHH--------H------HhcCCeeEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999999532 11111111 1 11234788999999976 5666655
Q ss_pred --------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccCCccc
Q psy7539 81 --------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 --------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~~~~~ 141 (318)
.++|+|||+||.... ...+...+++|+.|+.++++++. +. +..+||++||..++...
T Consensus 83 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~--- 158 (266)
T 1xq1_A 83 QTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSSIAGVVSA--- 158 (266)
T ss_dssp HHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEEC-----------
T ss_pred HHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEccchhccCC---
Confidence 478999999997432 23456789999999999999883 32 57899999997764321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.+ ...|+.||.+.|.+++.+.. .|++++++|||.++++...
T Consensus 159 ------~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 203 (266)
T 1xq1_A 159 ------SV-----------------------------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE 203 (266)
T ss_dssp -------------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----
T ss_pred ------CC-----------------------------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhh
Confidence 00 17899999999999987765 4899999999999885422
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .. ..+....... .....+++++|+|++++.++...... ..+..|++.++
T Consensus 204 ~~-------~~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gG 254 (266)
T 1xq1_A 204 AV-------YD-DEFKKVVISR---------KPLGRFGEPEEVSSLVAFLCMPAASY--ITGQTICVDGG 254 (266)
T ss_dssp -------------------------------------CCGGGGHHHHHHHTSGGGTT--CCSCEEECCCC
T ss_pred hh-------cC-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCccccC--ccCcEEEEcCC
Confidence 10 00 0011111110 01124789999999999988754321 14789999887
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.8e-15 Score=130.25 Aligned_cols=212 Identities=14% Similarity=0.108 Sum_probs=139.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|... ...+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 35 ~~la~~l~~~--G~~v~~~~r~~~--~~~~~~~~~l--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 90 (274)
T 1ja9_A 35 RGIAIELGRR--GASVVVNYGSSS--KAAEEVVAEL--------------KKLGAQGVAIQADISKP------SEVVALF 90 (274)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHH--------------HHTTCCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCch--HHHHHHHHHH--------------HhcCCcEEEEEecCCCH------HHHHHHH
Confidence 3689999998 999999998421 1111111111 11235788999999986 5677666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccc-cCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCH-PKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~-~~~~~~~E 143 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+ .+||++||..++ ...
T Consensus 91 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~----- 164 (274)
T 1ja9_A 91 DKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGI----- 164 (274)
T ss_dssp HHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCC-----
Confidence 5 79999999997532 1334578999999999999988763 12 689999998775 221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.|.+++.+.. .+++++++|||.+.++.....
T Consensus 165 ----~~-----------------------------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~ 211 (274)
T 1ja9_A 165 ----PN-----------------------------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDEN 211 (274)
T ss_dssp ----CS-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHH
T ss_pred ----CC-----------------------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcc
Confidence 01 16899999999999988765 489999999998876432100
Q ss_pred -----CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 -----PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 -----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+...... ........+. .+.....+++++|+|++++.++...... ..+++|++.++
T Consensus 212 ~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~dva~~i~~l~~~~~~~--~~G~~~~v~gG 272 (274)
T 1ja9_A 212 SWHYAPGGYKGM-PQEKIDEGLA---------NMNPLKRIGYPADIGRAVSALCQEESEW--INGQVIKLTGG 272 (274)
T ss_dssp GGGTSTTCCTTC-CHHHHHHHHH---------HTSTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred cccccccccccC-chHHHHHHHH---------hcCCCCCccCHHHHHHHHHHHhCccccc--ccCcEEEecCC
Confidence 0000000 0011111111 1223356899999999999998764321 13789999876
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.63 E-value=3.2e-14 Score=121.90 Aligned_cols=207 Identities=12% Similarity=0.068 Sum_probs=138.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.+ ..+.+.+.+. .....++.++.+|++++ +++..++
T Consensus 16 ~~~a~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~~~D~~~~------~~~~~~~ 71 (250)
T 2cfc_A 16 LAIATRFLAR--GDRVAALDLSAE---TLEETARTHW-------------HAYADKVLRVRADVADE------GDVNAAI 71 (250)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHS-------------TTTGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHH-------------HhcCCcEEEEEecCCCH------HHHHHHH
Confidence 3688999998 899999999532 1122221110 11134789999999986 5677666
Q ss_pred c-------CccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRF----------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~ 140 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..++...
T Consensus 72 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-- 149 (250)
T 2cfc_A 72 AATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF-- 149 (250)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC--
Confidence 5 79999999997432 1235678899999998777665431 256899999998765321
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
.+ ...|+.||.+.|.++..+.. .|++++++|||.++++..
T Consensus 150 -------~~-----------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 193 (250)
T 2cfc_A 150 -------PG-----------------------------RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMT 193 (250)
T ss_dssp -------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTT
T ss_pred -------CC-----------------------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcc
Confidence 01 17899999999999988765 489999999999987532
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .. ....+...+... .....+.+.+|+|++++.++..+... ..+..+++.++
T Consensus 194 ~~------~~-~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gG 246 (250)
T 2cfc_A 194 QW------RL-DQPELRDQVLAR---------IPQKEIGTAAQVADAVMFLAGEDATY--VNGAALVMDGA 246 (250)
T ss_dssp HH------HH-TSHHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSTTCTT--CCSCEEEESTT
T ss_pred cc------cc-CCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCchhhc--ccCCEEEECCc
Confidence 10 00 001122222221 11235789999999999988764321 24788998876
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=5.8e-15 Score=127.02 Aligned_cols=206 Identities=15% Similarity=0.126 Sum_probs=139.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. .... .+.+.+ .....+++++.+|++++ +++..++
T Consensus 21 ~~~a~~l~~~--G~~V~~~~r~~~-~~~~-~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 76 (258)
T 3afn_B 21 LATARLFARA--GAKVGLHGRKAP-ANID-ETIASM--------------RADGGDAAFFAADLATS------EACQQLV 76 (258)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCC-TTHH-HHHHHH--------------HHTTCEEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEECCCch-hhHH-HHHHHH--------------HhcCCceEEEECCCCCH------HHHHHHH
Confidence 3689999998 999999999722 1222 221111 11234789999999986 5777766
Q ss_pred c-------CccEEEEcccc-cCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC--C---ccEEEEeccccccC
Q psy7539 81 E-------TIHIVYHIAAT-VRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH--L---QLFVYVSTAYCHPK 137 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~-~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~--~---~~~v~~SS~~~~~~ 137 (318)
+ ++|+|||+||. ... ...+...+++|+.|+.++++++... .+ . .+||++||.+++..
T Consensus 77 ~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 156 (258)
T 3afn_B 77 DEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG 156 (258)
T ss_dssp HHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC
T ss_pred HHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC
Confidence 5 89999999996 321 1235568899999999998876531 01 2 68999999876431
Q ss_pred CcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 138 EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 138 ~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
. .++. ..|+.||.+.|.+++.+.. .|++++++|||.+++
T Consensus 157 ~--------~~~~-----------------------------~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t 199 (258)
T 3afn_B 157 G--------GPGA-----------------------------GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDT 199 (258)
T ss_dssp C--------CTTC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred C--------CCCc-----------------------------hHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccc
Confidence 0 0111 7899999999999987754 489999999999988
Q ss_pred ccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC-CCCCCCcEEEeeCC
Q psy7539 214 IWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS-NPGNTMRVINLTAN 287 (318)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-~~~~~~~~~ni~~~ 287 (318)
+.... . . ..+...+..+ .....+++++|+|++++.++..... . ..+++|++.++
T Consensus 200 ~~~~~-------~-~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~--~~G~~~~v~gg 254 (258)
T 3afn_B 200 AFHAD-------K-T-QDVRDRISNG---------IPMGRFGTAEEMAPAFLFFASHLASGY--ITGQVLDINGG 254 (258)
T ss_dssp GGGTT-------C-C-HHHHHHHHTT---------CTTCSCBCGGGTHHHHHHHHCHHHHTT--CCSEEEEESTT
T ss_pred ccccc-------c-C-HHHHHHHhcc---------CCCCcCCCHHHHHHHHHHHhCcchhcc--ccCCEEeECCC
Confidence 54321 1 1 1222222222 1224689999999999999876431 0 13789999887
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=6.2e-15 Score=126.29 Aligned_cols=204 Identities=14% Similarity=0.127 Sum_probs=140.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|... +..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 18 ~~ia~~l~~~--G~~V~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 73 (246)
T 3osu_A 18 RSIALQLAEE--GYNVAVNYAGSK--EKAEAVVEEI--------------KAKGVDSFAIQANVADA------DEVKAMI 73 (246)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHH--------------HHTTSCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCCH--HHHHHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHH
Confidence 3688999998 999998888532 1112222111 22235788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++ ++. +..+||++||..+....
T Consensus 74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---- 148 (246)
T 3osu_A 74 KEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSVVGAVGN---- 148 (246)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCC----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcCCC----
Confidence 5 78999999997521 2345678999999999999988 332 55799999997654321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
++ ...|+.||.+.+.+.+.++. +|+++.+++||.+.++....
T Consensus 149 -----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 194 (246)
T 3osu_A 149 -----PG-----------------------------QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA 194 (246)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC
T ss_pred -----CC-----------------------------ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc
Confidence 01 17899999999988877654 58999999999997754221
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ...+...+..+ .....+.+.+|+|++++.++...... ..+++|++.++
T Consensus 195 -------~--~~~~~~~~~~~---------~p~~r~~~~~dva~~v~~l~s~~~~~--itG~~i~vdgG 243 (246)
T 3osu_A 195 -------L--SDELKEQMLTQ---------IPLARFGQDTDIANTVAFLASDKAKY--ITGQTIHVNGG 243 (246)
T ss_dssp -------S--CHHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred -------c--CHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccccC--CCCCEEEeCCC
Confidence 1 12222233222 12335778899999999988765431 24889999887
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-14 Score=126.45 Aligned_cols=217 Identities=9% Similarity=0.053 Sum_probs=138.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. +..+.+.+.+. .....++.++.+|++++ +++..++
T Consensus 39 ~~ia~~la~~--G~~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 95 (281)
T 3v2h_A 39 LAIARTLAKA--GANIVLNGFGAP--DEIRTVTDEVA-------------GLSSGTVLHHPADMTKP------SEIADMM 95 (281)
T ss_dssp HHHHHHHHHT--TCEEEEECCCCH--HHHHHHHHHHH-------------TTCSSCEEEECCCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCCh--HHHHHHHHHHh-------------hccCCcEEEEeCCCCCH------HHHHHHH
Confidence 3688999998 999999988422 11222221111 11235789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 96 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 170 (281)
T 3v2h_A 96 AMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS----- 170 (281)
T ss_dssp HHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----
T ss_pred HHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC-----
Confidence 4 78999999997522 2345678999999999999987421 245689999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.. ...|+.||.+.+.+.+.++. +|+++.+++||.|.++.....
T Consensus 171 ----~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~ 217 (281)
T 3v2h_A 171 ----PF-----------------------------KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ 217 (281)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------
T ss_pred ----CC-----------------------------chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhh
Confidence 00 16899999999999887765 589999999999877432211
Q ss_pred CCcccCCCchHHHHHHHhc-CceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGK-GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ........... .........+.....+++++|+|++++.++...... ..+.++++.++
T Consensus 218 ~-------~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~--itG~~i~vdGG 277 (281)
T 3v2h_A 218 I-------PDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQ--ITGTHVSMDGG 277 (281)
T ss_dssp -----------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGG--CCSCEEEESTT
T ss_pred c-------chhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCC--CCCcEEEECCC
Confidence 0 00000000000 000011223445567999999999999988654421 14889999887
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=5.1e-15 Score=128.04 Aligned_cols=219 Identities=14% Similarity=0.030 Sum_probs=140.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .....++.++.+|++++ +++..++
T Consensus 21 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~l~-------------~~~~~~~~~~~~D~~~~------~~~~~~~ 76 (263)
T 3ai3_A 21 LAIAEGFAKE--GAHIVLVARQVD---RLHEAARSLK-------------EKFGVRVLEVAVDVATP------EGVDAVV 76 (263)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH-------------HHHCCCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCHH---HHHHHHHHHH-------------HhcCCceEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999532 1111111110 11134788999999986 5676666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 77 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 151 (263)
T 3ai3_A 77 ESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL----- 151 (263)
T ss_dssp HHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----
Confidence 5 79999999997532 2345678999999999998887531 256799999998775431
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+. ..|+.||.+.+.+.+.+.. +|++++++|||.++++.....
T Consensus 152 ----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 198 (263)
T 3ai3_A 152 ----WYE-----------------------------PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKT 198 (263)
T ss_dssp ----TTC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH
T ss_pred ----CCc-----------------------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhh
Confidence 011 6899999999999887654 589999999998877431100
Q ss_pred -CCcccCCCc-hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 220 -PGWTDNING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 220 -~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
..+...... ...+...+... ......+++++|+|++++.++..+... ..+..|++.++ ...+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~--------~~p~~~~~~~~dvA~~~~~l~s~~~~~--~~G~~~~vdgG--~~~s 262 (263)
T 3ai3_A 199 AKELTKDNGGDWKGYLQSVADE--------HAPIKRFASPEELANFFVFLCSERATY--SVGSAYFVDGG--MLKT 262 (263)
T ss_dssp HHHHTTTTTCCHHHHHHHHHHH--------HCTTCSCBCHHHHHHHHHHHTSTTCTT--CCSCEEEESTT--CCCC
T ss_pred hHhhhcccCCcHHHHHHHHHhc--------CCCCCCCcCHHHHHHHHHHHcCccccC--CCCcEEEECCC--cccc
Confidence 000000000 01111111110 011236899999999999988754321 24789999887 5443
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-14 Score=124.64 Aligned_cols=200 Identities=15% Similarity=0.060 Sum_probs=133.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+....+. +. .+...++.++.+|++++ +++..++
T Consensus 21 ~aia~~l~~~--G~~V~~~~r~~~~~~~---~~-----------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 72 (257)
T 3tpc_A 21 AAVTRMLAQE--GATVLGLDLKPPAGEE---PA-----------------AELGAAVRFRNADVTNE------ADATAAL 72 (257)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCC--------------------------------CEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCChHHHHH---HH-----------------HHhCCceEEEEccCCCH------HHHHHHH
Confidence 3688999998 9999999997543211 11 12234788999999986 5666666
Q ss_pred c-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc---------CCCccEEEEeccc
Q psy7539 81 E-------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM---------IHLQLFVYVSTAY 133 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~---------~~~~~~v~~SS~~ 133 (318)
+ ++|++||+||.... ...+...+++|+.|+.++++++... .+..+||++||..
T Consensus 73 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~ 152 (257)
T 3tpc_A 73 AFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIA 152 (257)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechh
Confidence 5 79999999997521 2345678999999999999988753 1235799999977
Q ss_pred cccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccc
Q psy7539 134 CHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPS 209 (318)
Q Consensus 134 ~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~ 209 (318)
++... .+ ...|+.||.+.+.+.+.++. +|+++.+++||
T Consensus 153 ~~~~~---------~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG 194 (257)
T 3tpc_A 153 AFDGQ---------IG-----------------------------QAAYAASKGGVAALTLPAARELARFGIRVVTIAPG 194 (257)
T ss_dssp HHHCC---------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred hccCC---------CC-----------------------------CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeC
Confidence 64321 01 17899999999988877654 58999999999
Q ss_pred ccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 210 IIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 210 ~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.|.++..... +......+.. .......+...+|+|++++.++..... .+.++++.++
T Consensus 195 ~v~t~~~~~~---------~~~~~~~~~~--------~~p~~~r~~~~~dva~~v~~l~s~~~i----tG~~i~vdGG 251 (257)
T 3tpc_A 195 IFDTPMMAGM---------PQDVQDALAA--------SVPFPPRLGRAEEYAALVKHICENTML----NGEVIRLDGA 251 (257)
T ss_dssp CBSCC-----------------------C--------CSSSSCSCBCHHHHHHHHHHHHHCTTC----CSCEEEESTT
T ss_pred CCCChhhccC---------CHHHHHHHHh--------cCCCCCCCCCHHHHHHHHHHHcccCCc----CCcEEEECCC
Confidence 8866432111 0001000110 001113588999999999999876333 5889999887
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-14 Score=124.85 Aligned_cols=205 Identities=12% Similarity=0.062 Sum_probs=136.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccce-EEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKV-IPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++++++|+++ |++|+++.|+.. ++.+.. .....++ .++.+|++++ +++..+
T Consensus 25 ~~la~~l~~~--G~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~~D~~~~------~~~~~~ 76 (254)
T 2wsb_A 25 LEICRAFAAS--GARLILIDREAA------ALDRAA--------------QELGAAVAARIVADVTDA------EAMTAA 76 (254)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHH--------------HHHGGGEEEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------HHhcccceeEEEEecCCH------HHHHHH
Confidence 3688999998 999999999532 222111 1112356 8899999986 566665
Q ss_pred h------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 80 S------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 80 ~------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++....
T Consensus 77 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---- 152 (254)
T 2wsb_A 77 AAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNR---- 152 (254)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS----
T ss_pred HHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCC----
Confidence 5 478999999997532 1335678899999977777765321 2578999999987653211
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
..|. ..|+.||.+.|.+++.+.. .|++++++|||.++++....
T Consensus 153 ---~~~~-----------------------------~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~- 199 (254)
T 2wsb_A 153 ---PQFA-----------------------------SSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLK- 199 (254)
T ss_dssp ---SSCB-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHH-
T ss_pred ---CCcc-----------------------------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhc-
Confidence 0111 6899999999999887765 48999999999887743210
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
......+...+... .....+++++|+|++++.++...... ..+..+++.++
T Consensus 200 ------~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gG 250 (254)
T 2wsb_A 200 ------MRERPELFETWLDM---------TPMGRCGEPSEIAAAALFLASPAASY--VTGAILAVDGG 250 (254)
T ss_dssp ------HHTCHHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------cccChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCccccc--ccCCEEEECCC
Confidence 00001122222221 11245889999999999988654321 14788999876
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.4e-14 Score=124.88 Aligned_cols=223 Identities=14% Similarity=0.071 Sum_probs=143.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC------CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK------NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAE 74 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~------~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~ 74 (318)
++++++|+++ |++|+++.|+.... ...+++.+... .+ .....++.++.+|++++ +
T Consensus 27 ~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~D~~~~------~ 87 (278)
T 3sx2_A 27 RAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVK-----LV------EDIGSRIVARQADVRDR------E 87 (278)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHH-----HH------HHHTCCEEEEECCTTCH------H
T ss_pred HHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHH-----HH------HhcCCeEEEEeCCCCCH------H
Confidence 3688999998 99999999863211 11223332211 00 22345899999999986 5
Q ss_pred HHHHHhc-------CccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcc
Q psy7539 75 DRQMLSE-------TIHIVYHIAATVRF---DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 75 ~~~~~~~-------~~d~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~ 140 (318)
++..+++ ++|++||+||.... ...++..+++|+.|+.++++++... +...+||++||..+.....
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~- 166 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG- 166 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC-
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc-
Confidence 6776665 79999999997533 2445678999999999999987542 1245899999977643211
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
.+. +. ...|+.||.+.+.+.+.++. +|+++.+++||.|.++..
T Consensus 167 -------~~~-~~-------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 213 (278)
T 3sx2_A 167 -------SAD-PG-------------------------SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI 213 (278)
T ss_dssp -------CSS-HH-------------------------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred -------cCC-CC-------------------------chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccc
Confidence 000 00 06899999999999887764 579999999999876432
Q ss_pred CCCCCcccCCCchHHHHHHHhc-CceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGK-GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .. .....+..... ............ ..+.+.+|+|++++.++...... ..+.++++.++
T Consensus 214 ~-------~~-~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~--itG~~i~vdGG 274 (278)
T 3sx2_A 214 N-------NE-FTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARY--ITGVTLPVDAG 274 (278)
T ss_dssp S-------SH-HHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred h-------hh-hHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCccccc--ccCCEEeECCC
Confidence 1 00 01111111111 110111122222 67899999999999998765431 24889999887
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.6e-14 Score=123.89 Aligned_cols=217 Identities=14% Similarity=0.029 Sum_probs=141.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC-------CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK-------NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISA 73 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~-------~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~ 73 (318)
++++++|+++ |++|+++.|..+.. ...+++++... .+ .....++.++.+|++++
T Consensus 29 ~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~Dv~~~------ 89 (280)
T 3pgx_A 29 RSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETAR-----LV------EDQGRKALTRVLDVRDD------ 89 (280)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHH-----HH------HTTTCCEEEEECCTTCH------
T ss_pred HHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHH-----HH------HhcCCeEEEEEcCCCCH------
Confidence 3688999998 99999999853211 11233332211 00 22245788999999986
Q ss_pred HHHHHHhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccc
Q psy7539 74 EDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCH 135 (318)
Q Consensus 74 ~~~~~~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~ 135 (318)
+++..+++ ++|++||+||.... ...++..+++|+.|+.++++++... +...+||++||..++
T Consensus 90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 169 (280)
T 3pgx_A 90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL 169 (280)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc
Confidence 56666654 78999999997532 2345678999999999999987532 124679999997764
Q ss_pred cCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 136 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
.... . ...|+.||.+.+.+.+.++. +|+++.+++||.|
T Consensus 170 ~~~~---------~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v 211 (280)
T 3pgx_A 170 KATP---------G-----------------------------NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSV 211 (280)
T ss_dssp SCCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred cCCC---------C-----------------------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcc
Confidence 3210 0 16899999999998887765 5899999999988
Q ss_pred ccccCCCCCCcccCCCchHHHHHHHhcCce--eeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 212 IPIWKDPLPGWTDNINGPTGLLIGAGKGII--RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 212 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.++.. .............. ..+......+.-+.+++|+|++++.++...... ..+.++++.++
T Consensus 212 ~t~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~--itG~~i~vdGG 276 (280)
T 3pgx_A 212 ETPMI-----------EPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGT--LTGTQIPVDKG 276 (280)
T ss_dssp CSTTC-----------CHHHHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTT--CSSCEEEESTT
T ss_pred cCccc-----------chhhhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccC--CCCCEEEECCC
Confidence 76421 11111111111100 000011112224899999999999988765431 24789999877
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.6e-14 Score=123.79 Aligned_cols=205 Identities=12% Similarity=0.059 Sum_probs=138.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. ...+.+.++. ....+..++.+|++++ +++..++
T Consensus 25 ~~ia~~l~~~--G~~V~~~~r~~---~~~~~~~~l~---------------~~~~~~~~~~~D~~~~------~~v~~~~ 78 (265)
T 1qsg_A 25 YGIAQAMHRE--GAELAFTYQND---KLKGRVEEFA---------------AQLGSDIVLQCDVAED------ASIDTMF 78 (265)
T ss_dssp HHHHHHHHHT--TCEEEEEESST---TTHHHHHHHH---------------HHTTCCCEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCcH---HHHHHHHHHH---------------HhcCCcEEEEccCCCH------HHHHHHH
Confidence 3688999998 99999999975 2222333221 1112347889999986 5666665
Q ss_pred c-------CccEEEEcccccCc------------chhHHHHHHHhHHHHHHHHHHHHhcC-CCccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRF------------DDYMQTYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~v~~SS~~~~~~~~~ 140 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++...- ...+||++||..++...
T Consensus 79 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-- 156 (265)
T 1qsg_A 79 AELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI-- 156 (265)
T ss_dssp HHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC--
T ss_pred HHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC--
Confidence 4 68999999997531 12345689999999999999998631 12489999997664320
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
++ ...|+.||.+.+.+.+.+.. +|+++.+++||.+.++..
T Consensus 157 -------~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 200 (265)
T 1qsg_A 157 -------PN-----------------------------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA 200 (265)
T ss_dssp -------TT-----------------------------TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTG
T ss_pred -------CC-----------------------------chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchh
Confidence 01 17899999999999987765 489999999999977432
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .......+...+.... ....+.+++|+|++++.++...... ..+..|++.++
T Consensus 201 ~-------~~~~~~~~~~~~~~~~---------p~~~~~~~~dva~~v~~l~s~~~~~--~tG~~~~vdgG 253 (265)
T 1qsg_A 201 S-------GIKDFRKMLAHCEAVT---------PIRRTVTIEDVGNSAAFLCSDLSAG--ISGEVVHVDGG 253 (265)
T ss_dssp G-------GSTTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred h-------cccccHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCchhcC--ccCCEEEECCC
Confidence 1 1111112222222110 1124779999999999998754321 24789999888
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.8e-15 Score=126.79 Aligned_cols=205 Identities=19% Similarity=0.138 Sum_probs=129.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.+... ...+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 19 ~~~a~~l~~~--G~~V~~~~~r~~--~~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 74 (247)
T 2hq1_A 19 KAIAWKLGNM--GANIVLNGSPAS--TSLDATAEEF--------------KAAGINVVVAKGDVKNP------EDVENMV 74 (247)
T ss_dssp HHHHHHHHHT--TCEEEEEECTTC--SHHHHHHHHH--------------HHTTCCEEEEESCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCcCH--HHHHHHHHHH--------------HhcCCcEEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999844322 1222222111 11235788999999986 5676665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..+....
T Consensus 75 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----- 149 (247)
T 2hq1_A 75 KTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN----- 149 (247)
T ss_dssp HHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC------------
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----
Confidence 5 79999999997532 1234568999999998888877542 256799999997542210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
++ ...|+.||.+.|.+.+.+.. .++++++++||.+.++...
T Consensus 150 ----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-- 194 (247)
T 2hq1_A 150 ----AG-----------------------------QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD-- 194 (247)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--
T ss_pred ----CC-----------------------------CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh--
Confidence 00 17899999999999888755 4899999999987553211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+ +......+..+ .....+++++|+|+++..++..+... ..++.|++.++
T Consensus 195 -----~~--~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gG 244 (247)
T 2hq1_A 195 -----VL--PDKVKEMYLNN---------IPLKRFGTPEEVANVVGFLASDDSNY--ITGQVINIDGG 244 (247)
T ss_dssp -----TS--CHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hc--chHHHHHHHhh---------CCCCCCCCHHHHHHHHHHHcCccccc--ccCcEEEeCCC
Confidence 11 11111222221 12246889999999999888764321 13789999877
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.7e-14 Score=124.33 Aligned_cols=210 Identities=10% Similarity=0.010 Sum_probs=141.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 26 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 80 (256)
T 3gaf_A 26 RAIAGTFAKA--GASVVVTDLKSE---GAEAVAAAI--------------RQAGGKAIGLECNVTDE------QHREAVI 80 (256)
T ss_dssp HHHHHHHHHH--TCEEEEEESSHH---HHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCcEEEEECCCCCH------HHHHHHH
Confidence 3689999999 999999999532 112222111 22235789999999986 5666655
Q ss_pred c-------CccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 81 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 154 (256)
T 3gaf_A 81 KAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN------ 154 (256)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC------
Confidence 4 79999999997532 2345678999999999999987431 245699999998764321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+ ...|+.||.+.+.+.+.++. +|+++..++||.+.++...
T Consensus 155 ---~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~--- 199 (256)
T 3gaf_A 155 ---VR-----------------------------MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALA--- 199 (256)
T ss_dssp ---TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH---
T ss_pred ---CC-----------------------------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhh---
Confidence 01 17899999999999887765 5899999999987553210
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeH
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITW 294 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~ 294 (318)
.... ......+.. ......+.+.+|+|++++.++...... ..++++++.++ ...++
T Consensus 200 ----~~~~-~~~~~~~~~---------~~p~~r~~~~~dva~~~~~L~s~~~~~--itG~~i~vdgG--~~~~~ 255 (256)
T 3gaf_A 200 ----TVLT-PEIERAMLK---------HTPLGRLGEAQDIANAALFLCSPAAAW--ISGQVLTVSGG--GVQEL 255 (256)
T ss_dssp ----HHCC-HHHHHHHHT---------TCTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT--SCCC-
T ss_pred ----hccC-HHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCCcccC--ccCCEEEECCC--ccccC
Confidence 0000 111222222 112345789999999999988754431 24889999988 55543
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.3e-14 Score=125.52 Aligned_cols=206 Identities=14% Similarity=0.100 Sum_probs=138.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ...+.+.+.. .....++.++.+|++++ +++..++
T Consensus 21 ~~~a~~l~~~--G~~v~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~v~~~~ 76 (264)
T 3i4f_A 21 KQVTEKLLAK--GYSVTVTYHSDT--TAMETMKETY--------------KDVEERLQFVQADVTKK------EDLHKIV 76 (264)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHT--------------GGGGGGEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCCh--HHHHHHHHHH--------------HhcCCceEEEEecCCCH------HHHHHHH
Confidence 3689999998 999999988532 2222333221 22345899999999986 5666665
Q ss_pred c-------CccEEEEcccc--cC-------cchhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAAT--VR-------FDDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~--~~-------~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~ 140 (318)
+ ++|+|||+||. .. ....+...+++|+.|+.++++++ ++. +..++|++||........
T Consensus 77 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~- 154 (264)
T 3i4f_A 77 EEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQGADSAPG- 154 (264)
T ss_dssp HHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTTGGGCCC-
T ss_pred HHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEEeechhcccCC-
Confidence 4 78999999993 11 12345678999999999999988 442 567999999975432110
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
..+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++..
T Consensus 155 ------~~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 199 (264)
T 3i4f_A 155 ------WIY-----------------------------RSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMK 199 (264)
T ss_dssp ------CTT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGG
T ss_pred ------CCC-----------------------------CchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccc
Confidence 001 17899999999998877654 589999999999977543
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .... ..... .......+.+.+|+|++++.++...... ..++++++.++
T Consensus 200 ~~~---------~~~~-~~~~~--------~~~p~~r~~~~~dva~~v~~l~s~~~~~--itG~~i~vdGG 250 (264)
T 3i4f_A 200 EAT---------IQEA-RQLKE--------HNTPIGRSGTGEDIARTISFLCEDDSDM--ITGTIIEVTGA 250 (264)
T ss_dssp SCC---------HHHH-HHC----------------CCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESCS
T ss_pred hhc---------cHHH-HHHHh--------hcCCCCCCcCHHHHHHHHHHHcCcccCC--CCCcEEEEcCc
Confidence 211 1111 11111 1112235789999999999998765431 24889999988
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.61 E-value=4.4e-14 Score=122.29 Aligned_cols=206 Identities=11% Similarity=0.050 Sum_probs=136.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .....++.++.+|++++ +++..++
T Consensus 37 ~~~a~~l~~~--G~~V~~~~r~~~---~~~~~~~~l~-------------~~~~~~~~~~~~Dl~~~------~~v~~~~ 92 (266)
T 3o38_A 37 STTARRALLE--GADVVISDYHER---RLGETRDQLA-------------DLGLGRVEAVVCDVTST------EAVDALI 92 (266)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH-------------TTCSSCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEecCCHH---HHHHHHHHHH-------------hcCCCceEEEEeCCCCH------HHHHHHH
Confidence 3688999998 999999999532 1111211111 11235899999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... ++..+||++||..++...
T Consensus 93 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 168 (266)
T 3o38_A 93 TQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ---- 168 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC----
T ss_pred HHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC----
Confidence 4 68999999997432 2345678999999999999987653 144689999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+. ..|+.||.+.+.+.+.+.. +|+++.+++||.|.......
T Consensus 169 -----~~~-----------------------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 214 (266)
T 3o38_A 169 -----HSQ-----------------------------SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEK 214 (266)
T ss_dssp -----TTC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----
T ss_pred -----CCC-----------------------------chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhc
Confidence 111 7899999999999887654 58999999999886532111
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .... ...........+.+.+|+|++++.++...... ..++++++.++
T Consensus 215 -------~~~-~~~~---------~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~--~tG~~i~vdgG 264 (266)
T 3o38_A 215 -------TSS-SELL---------DRLASDEAFGRAAEPWEVAATIAFLASDYSSY--MTGEVVSVSSQ 264 (266)
T ss_dssp -----------------------------CCTTSSCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESSC
T ss_pred -------cCc-HHHH---------HHHHhcCCcCCCCCHHHHHHHHHHHcCccccC--ccCCEEEEcCC
Confidence 000 0000 01112223456789999999999988764431 24889999876
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.61 E-value=9e-15 Score=130.31 Aligned_cols=225 Identities=9% Similarity=0.011 Sum_probs=150.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccC-------CCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPK-------KNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISA 73 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~-------~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~ 73 (318)
++++++|+++ |++|+++.|+. ...+..+.+.+.+ .....++.++.+|++++
T Consensus 41 ~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~Dv~d~------ 98 (322)
T 3qlj_A 41 RAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEI--------------TAAGGEAVADGSNVADW------ 98 (322)
T ss_dssp HHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHH--------------HHTTCEEEEECCCTTSH------
T ss_pred HHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHH--------------HhcCCcEEEEECCCCCH------
Confidence 3688999998 99999998861 1122222222211 22235788999999986
Q ss_pred HHHHHHhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcC------C---CccEEEEe
Q psy7539 74 EDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMI------H---LQLFVYVS 130 (318)
Q Consensus 74 ~~~~~~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~------~---~~~~v~~S 130 (318)
+++..+++ ++|++||+||.... ...++..+++|+.|+.++++++...- + -.+||++|
T Consensus 99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~is 178 (322)
T 3qlj_A 99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS 178 (322)
T ss_dssp HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEc
Confidence 56666654 78999999997532 23456789999999999999875420 0 14899999
Q ss_pred ccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEe
Q psy7539 131 TAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMIL 206 (318)
Q Consensus 131 S~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~il 206 (318)
|..+..... . ...|+.||.+.+.+.+.++. +|+++.++
T Consensus 179 S~~~~~~~~---------~-----------------------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v 220 (322)
T 3qlj_A 179 SGAGLQGSV---------G-----------------------------QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAI 220 (322)
T ss_dssp CHHHHHCBT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CHHHccCCC---------C-----------------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEe
Confidence 976543210 0 16899999999999887654 58999999
Q ss_pred cccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC
Q psy7539 207 RPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 286 (318)
Q Consensus 207 R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~ 286 (318)
+|| +...... .... .........+.++..+|+|.+++.++...... ..+.+|++.+
T Consensus 221 ~PG-~~t~~~~-------~~~~--------------~~~~~~~~~~~~~~pedva~~v~~L~s~~~~~--itG~~i~vdG 276 (322)
T 3qlj_A 221 APS-ARTRMTE-------TVFA--------------EMMATQDQDFDAMAPENVSPLVVWLGSAEARD--VTGKVFEVEG 276 (322)
T ss_dssp EEC-TTSCCSC-------CSCC--------------C--------CCTTCGGGTHHHHHHHTSGGGGG--CCSCEEEEET
T ss_pred cCC-CCCccch-------hhhh--------------hhhhccccccCCCCHHHHHHHHHHHhCccccC--CCCCEEEECC
Confidence 999 5432211 1110 00011223345678999999999988654421 1488999988
Q ss_pred CCCCce-----------------eHHHHHHHHHHhhcccCCC
Q psy7539 287 NKDFQI-----------------TWYDIIENGKDIARNKVPL 311 (318)
Q Consensus 287 ~~~~~~-----------------~~~el~~~i~~~~~~~~p~ 311 (318)
+ ... ++.|+++.+.+.+|.+.|.
T Consensus 277 G--~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~ 316 (322)
T 3qlj_A 277 G--KIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARPP 316 (322)
T ss_dssp T--EEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCCC
T ss_pred C--ccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCCC
Confidence 7 433 6799999999998765443
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.3e-14 Score=122.64 Aligned_cols=205 Identities=14% Similarity=0.084 Sum_probs=138.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.++. ....++.++.+|++++ +++..++
T Consensus 37 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~l~---------------~~~~~~~~~~~Dl~~~------~~v~~~~ 90 (285)
T 2p91_A 37 YGIAKSFHRE--GAQLAFTYATPK---LEKRVREIA---------------KGFGSDLVVKCDVSLD------EDIKNLK 90 (285)
T ss_dssp HHHHHHHHHT--TCEEEEEESSGG---GHHHHHHHH---------------HHTTCCCEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHc--CCEEEEEeCCHH---HHHHHHHHH---------------HhcCCeEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999642 222333221 1112477899999986 5666665
Q ss_pred c-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhcC--CCccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQMI--HLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~~v~~SS~~~~~~~~~ 140 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++...- +..+||++||..+....
T Consensus 91 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-- 168 (285)
T 2p91_A 91 KFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV-- 168 (285)
T ss_dssp HHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC--
T ss_pred HHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC--
Confidence 4 78999999997532 13356789999999999999998641 22689999997664320
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
++ ...|+.||.+.+.+.+.+.. .|+++.+++||.|.++..
T Consensus 169 -------~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 212 (285)
T 2p91_A 169 -------PH-----------------------------YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAA 212 (285)
T ss_dssp -------TT-----------------------------TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC
T ss_pred -------CC-----------------------------ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchh
Confidence 01 17899999999999887654 489999999999977532
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ......+...+.... ....+.+++|+|++++.++...... ..+..|++.++
T Consensus 213 ~~-------~~~~~~~~~~~~~~~---------p~~~~~~~~dva~~~~~l~s~~~~~--~tG~~~~vdgg 265 (285)
T 2p91_A 213 YS-------ITGFHLLMEHTTKVN---------PFGKPITIEDVGDTAVFLCSDWARA--ITGEVVHVDNG 265 (285)
T ss_dssp ---------CTTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred hc-------ccchHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCCcccC--CCCCEEEECCC
Confidence 21 111112222221110 0124678999999999998654321 24788999877
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-14 Score=124.62 Aligned_cols=212 Identities=11% Similarity=0.037 Sum_probs=140.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+.+.++. .....++.++.+|++++ +++..++
T Consensus 28 ~~~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 83 (265)
T 1h5q_A 28 LAFTRAVAAA--GANVAVIYRSAAD--AVEVTEKVG--------------KEFGVKTKAYQCDVSNT------DIVTKTI 83 (265)
T ss_dssp HHHHHHHHHT--TEEEEEEESSCTT--HHHHHHHHH--------------HHHTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCeEEEEeCcchh--hHHHHHHHH--------------HhcCCeeEEEEeeCCCH------HHHHHHH
Confidence 3689999998 9999999996432 222222210 11235788999999986 5666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||.... ...+...+++|+.|+.++++++... +...+||++||..++.......
T Consensus 84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~ 163 (265)
T 1h5q_A 84 QQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL 163 (265)
T ss_dssp HHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred HHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc
Confidence 4 48999999997532 2345568999999999999987642 1247899999976643211000
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
....|. ..|+.||.+.|.+++.+.. +|++++++|||.+.++...
T Consensus 164 --~~~~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~- 211 (265)
T 1h5q_A 164 --NGSLTQ-----------------------------VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA- 211 (265)
T ss_dssp --TEECSC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-
T ss_pred --cccccc-----------------------------cccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccc-
Confidence 000111 7899999999999988765 4899999999999775321
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . .......... .....+++++|+|++++.++...... ..+..|++.++
T Consensus 212 ------~~-~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gG 261 (265)
T 1h5q_A 212 ------HM-D-KKIRDHQASN---------IPLNRFAQPEEMTGQAILLLSDHATY--MTGGEYFIDGG 261 (265)
T ss_dssp ------GS-C-HHHHHHHHHT---------CTTSSCBCGGGGHHHHHHHHSGGGTT--CCSCEEEECTT
T ss_pred ------cc-c-hhHHHHHHhc---------CcccCCCCHHHHHHHHHhhccCchhc--CcCcEEEecCC
Confidence 11 1 1111111111 01134789999999999998764321 14789999887
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.1e-14 Score=122.83 Aligned_cols=207 Identities=12% Similarity=-0.006 Sum_probs=136.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ...+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 21 ~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~~l--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 76 (261)
T 1gee_A 21 KSMAIRFATE--KAKVVVNYRSKE--DEANSVLEEI--------------KKVGGEAIAVKGDVTVE------SDVINLV 76 (261)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHH--------------HHTTCEEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCCh--HHHHHHHHHH--------------HhcCCceEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999999321 1111111111 11234788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+ ..+||++||..+...
T Consensus 77 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~----- 151 (261)
T 1gee_A 77 QSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP----- 151 (261)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-----
Confidence 5 78999999997532 2345678999999999988876542 13 579999999765432
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
..+. ..|+.||.+.+.+.+.+.. .+++++++|||.++++...
T Consensus 152 ----~~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~- 197 (261)
T 1gee_A 152 ----WPLF-----------------------------VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA- 197 (261)
T ss_dssp ----CTTC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH-
T ss_pred ----CCCc-----------------------------cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh-
Confidence 0111 7899999999988877654 4899999999998774311
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...........+... .....+++++|+|++++.++...... ..+..+++.++
T Consensus 198 ------~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gg 249 (261)
T 1gee_A 198 ------EKFADPEQRADVESM---------IPMGYIGEPEEIAAVAAWLASSEASY--VTGITLFADGG 249 (261)
T ss_dssp ------HHHHSHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------hcccChhHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccccC--CCCcEEEEcCC
Confidence 000001111111111 11235889999999999988754321 14789999887
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4e-14 Score=122.29 Aligned_cols=195 Identities=13% Similarity=0.076 Sum_probs=134.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++.+.. .....++.++.+|++++ +++..++
T Consensus 21 ~~ia~~l~~~--G~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~D~~~~------~~v~~~~ 72 (260)
T 1nff_A 21 ASHVRAMVAE--GAKVVFGDILDE------EGKAMA--------------AELADAARYVHLDVTQP------AQWKAAV 72 (260)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHH--------------HHTGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------HHhhcCceEEEecCCCH------HHHHHHH
Confidence 3688999998 999999999531 122110 11123578899999986 5777766
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++ ++. +..+||++||..++...
T Consensus 73 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---- 147 (260)
T 1nff_A 73 DTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLAGT---- 147 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEeehhhcCCC----
Confidence 5 89999999997532 2345678999999997666554 442 56799999998765321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
++. ..|+.||.+.+.+.+.+.. +|++++++|||.++++...
T Consensus 148 -----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~- 192 (260)
T 1nff_A 148 -----VAC-----------------------------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD- 192 (260)
T ss_dssp -----TTB-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-
T ss_pred -----CCc-----------------------------hhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-
Confidence 011 6899999999999887654 5899999999999875321
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .+ . ... ......+.+.+|+|++++.++...... ..+..|++.++
T Consensus 193 ~--------~~--------~-~~~-----~~~~~~~~~~~dvA~~v~~l~s~~~~~--~~G~~~~v~gG 237 (260)
T 1nff_A 193 W--------VP--------E-DIF-----QTALGRAAEPVEVSNLVVYLASDESSY--STGAEFVVDGG 237 (260)
T ss_dssp T--------SC--------T-TCS-----CCSSSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred c--------ch--------h-hHH-----hCccCCCCCHHHHHHHHHHHhCccccC--CcCCEEEECCC
Confidence 0 00 0 000 011235789999999999988764321 24789999887
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.61 E-value=8.3e-15 Score=121.48 Aligned_cols=171 Identities=9% Similarity=0.071 Sum_probs=125.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+ + |++|+++.|+.. ++.+|++++ ++++.++
T Consensus 17 ~~~~~~l~-~--g~~V~~~~r~~~----------------------------------~~~~D~~~~------~~~~~~~ 53 (202)
T 3d7l_A 17 SAVKERLE-K--KAEVITAGRHSG----------------------------------DVTVDITNI------DSIKKMY 53 (202)
T ss_dssp HHHHHHHT-T--TSEEEEEESSSS----------------------------------SEECCTTCH------HHHHHHH
T ss_pred HHHHHHHH-C--CCeEEEEecCcc----------------------------------ceeeecCCH------HHHHHHH
Confidence 36889998 8 899999999521 368899876 5777776
Q ss_pred cC---ccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCCC
Q psy7539 81 ET---IHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPPP 149 (318)
Q Consensus 81 ~~---~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~p 149 (318)
++ +|+|||+||.... ...+...+++|+.|+.++++++.+. ....+||++||.+++... .+
T Consensus 54 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~ 124 (202)
T 3d7l_A 54 EQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI---------VQ 124 (202)
T ss_dssp HHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC---------TT
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC---------Cc
Confidence 64 8999999996421 1334567899999999999999863 112689999997664321 11
Q ss_pred CChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 150 VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
. ..|+.+|.+.|.+++.+.. .|++++++||+.++++..
T Consensus 125 ~-----------------------------~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~---------- 165 (202)
T 3d7l_A 125 G-----------------------------ASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD---------- 165 (202)
T ss_dssp C-----------------------------HHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH----------
T ss_pred c-----------------------------HHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh----------
Confidence 1 6899999999999998875 389999999998876321
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEe
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 284 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni 284 (318)
. . ......+++++++|+|++++.++.... .+++||+
T Consensus 166 ----~----~---------~~~~~~~~~~~~~dva~~~~~~~~~~~-----~G~~~~v 201 (202)
T 3d7l_A 166 ----K----L---------EPFFEGFLPVPAAKVARAFEKSVFGAQ-----TGESYQV 201 (202)
T ss_dssp ----H----H---------GGGSTTCCCBCHHHHHHHHHHHHHSCC-----CSCEEEE
T ss_pred ----h----h---------hhhccccCCCCHHHHHHHHHHhhhccc-----cCceEec
Confidence 0 0 111234678999999999998884433 3778887
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-14 Score=125.34 Aligned_cols=201 Identities=16% Similarity=0.114 Sum_probs=115.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 23 ~~~a~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 77 (253)
T 3qiv_A 23 QAYAEALARE--GAAVVVADINAE---AAEAVAKQI--------------VADGGTAISVAVDVSDP------ESAKAMA 77 (253)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HHTTCEEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCHH---HHHHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHH
Confidence 3689999998 999999999532 112221111 12235788999999986 5666665
Q ss_pred c-------CccEEEEcccccC----------cchhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCc
Q psy7539 81 E-------TIHIVYHIAATVR----------FDDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~----------~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~ 139 (318)
+ ++|+|||+||... ....+...+++|+.|+.++.+++ .+. +..+||++||..++..
T Consensus 78 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~-- 154 (253)
T 3qiv_A 78 DRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQSSTAAWLY-- 154 (253)
T ss_dssp HHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECC--------
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCccccCC--
Confidence 5 7999999999731 12345678999999966666554 442 5578999999776421
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
. ..|+.||.+.+.+.+.+.. .|+++.+++||.+.++.
T Consensus 155 ----------~-----------------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 195 (253)
T 3qiv_A 155 ----------S-----------------------------NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEA 195 (253)
T ss_dssp --------------------------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------
T ss_pred ----------C-----------------------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccc
Confidence 0 7899999999999887765 47999999999887743
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... .+..+...+..+ .....+.+++|+|++++.++...... ..+++|++.++
T Consensus 196 ~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~~--~tG~~~~vdgG 248 (253)
T 3qiv_A 196 NRTT--------TPKEMVDDIVKG---------LPLSRMGTPDDLVGMCLFLLSDEASW--ITGQIFNVDGG 248 (253)
T ss_dssp -----------------------------------------CCHHHHHHHHHHSGGGTT--CCSCEEEC---
T ss_pred hhhc--------CcHHHHHHHhcc---------CCCCCCCCHHHHHHHHHHHcCccccC--CCCCEEEECCC
Confidence 2210 111111111111 12234567899999999988765431 24889999988
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-14 Score=122.35 Aligned_cols=203 Identities=12% Similarity=0.103 Sum_probs=132.7
Q ss_pred ChhHHHHHhhCCCcEEEEE-EccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEE-EeccCCCCCCCCCHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYIL-LRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIP-INGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~gDl~~~~~gl~~~~~~~ 78 (318)
++++++|+++ |++|+++ .|+.+ ..+.+.+.+ .....++.+ +.+|++++ +++..
T Consensus 15 ~~~a~~l~~~--G~~v~~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~~D~~~~------~~~~~ 69 (245)
T 2ph3_A 15 RAIALRLAED--GFALAIHYGQNRE---KAEEVAEEA--------------RRRGSPLVAVLGANLLEA------EAATA 69 (245)
T ss_dssp HHHHHHHHTT--TCEEEEEESSCHH---HHHHHHHHH--------------HHTTCSCEEEEECCTTSH------HHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCCHH---HHHHHHHHH--------------HhcCCceEEEEeccCCCH------HHHHH
Confidence 3688999998 9999998 66421 111111111 111235666 89999976 56665
Q ss_pred Hhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHH----HHHhcCCCccEEEEeccccccCCcc
Q psy7539 79 LSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLN----LSKQMIHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 79 ~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~----~a~~~~~~~~~v~~SS~~~~~~~~~ 140 (318)
+++ ++|+|||+||.... ...+...+++|+.|+.++++ .+++. +..+||++||..+....
T Consensus 70 ~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~-- 146 (245)
T 2ph3_A 70 LVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNITSVVGILGN-- 146 (245)
T ss_dssp HHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCC--
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEEEEEeChhhccCC--
Confidence 543 79999999997532 23456789999999555554 45443 67899999997653221
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
.+. ..|+.||.+.+.+.+.+.. .|++++++|||.+.++..
T Consensus 147 -------~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 190 (245)
T 2ph3_A 147 -------PGQ-----------------------------ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMT 190 (245)
T ss_dssp -------SSB-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred -------CCC-----------------------------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcch
Confidence 001 6899999999988887755 489999999998876432
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .. +..+...+.... ....+++++|+|++++.++..+... ..++.|++.++
T Consensus 191 ~-------~~--~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gg 241 (245)
T 2ph3_A 191 E-------RL--PQEVKEAYLKQI---------PAGRFGRPEEVAEAVAFLVSEKAGY--ITGQTLCVDGG 241 (245)
T ss_dssp H-------TS--CHHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred h-------hc--CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccc--ccCCEEEECCC
Confidence 1 11 111222222211 1235889999999999998764321 13789999877
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.60 E-value=1.9e-14 Score=122.84 Aligned_cols=205 Identities=14% Similarity=0.092 Sum_probs=135.9
Q ss_pred ChhHHHHHhhCCCcEEEEE-EccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYIL-LRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++++++|+++ |++|+++ .|+.. ..+.+.+.+ .....++.++.+|++++ +++..+
T Consensus 15 ~~la~~l~~~--G~~v~~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~ 69 (244)
T 1edo_A 15 KAIALSLGKA--GCKVLVNYARSAK---AAEEVSKQI--------------EAYGGQAITFGGDVSKE------ADVEAM 69 (244)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCHH---HHHHHHHHH--------------HHHTCEEEEEECCTTSH------HHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCCHH---HHHHHHHHH--------------HhcCCcEEEEeCCCCCH------HHHHHH
Confidence 3689999998 9999885 56421 111221111 11234788999999986 567766
Q ss_pred hc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 80 SE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
++ ++|+|||+||.... ...++..+++|+.|+.++++++.+. .+..+||++||..+....
T Consensus 70 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 145 (244)
T 1edo_A 70 MKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN---- 145 (244)
T ss_dssp HHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----
T ss_pred HHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC----
Confidence 65 78999999997532 2345678999999999999888652 256799999997653221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+ ...|+.||.+.+.+.+.+.. .|++++++|||.+.++....
T Consensus 146 -----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 191 (244)
T 1edo_A 146 -----IG-----------------------------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK 191 (244)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred -----CC-----------------------------CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh
Confidence 01 16899999999988877654 48999999999887643211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. . ..+....... .....+++.+|+|++++.++..+... ...++.|++.++
T Consensus 192 -------~-~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~-~~~G~~~~v~gG 241 (244)
T 1edo_A 192 -------L-G-EDMEKKILGT---------IPLGRTGQPENVAGLVEFLALSPAAS-YITGQAFTIDGG 241 (244)
T ss_dssp -------T-C-HHHHHHHHTS---------CTTCSCBCHHHHHHHHHHHHHCSGGG-GCCSCEEEESTT
T ss_pred -------c-C-hHHHHHHhhc---------CCCCCCCCHHHHHHHHHHHhCCCccC-CcCCCEEEeCCC
Confidence 1 1 1111222111 11235889999999999988432210 013788999876
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-14 Score=124.71 Aligned_cols=200 Identities=13% Similarity=0.074 Sum_probs=135.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+ +. .+...++.++.+|++++ +++..++
T Consensus 26 ~~~a~~l~~~--G~~V~~~~r~~~~--~~~-~~-----------------~~~~~~~~~~~~D~~~~------~~v~~~~ 77 (265)
T 2o23_A 26 LATAERLVGQ--GASAVLLDLPNSG--GEA-QA-----------------KKLGNNCVFAPADVTSE------KDVQTAL 77 (265)
T ss_dssp HHHHHHHHHT--TCEEEEEECTTSS--HHH-HH-----------------HHHCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCcHh--HHH-HH-----------------HHhCCceEEEEcCCCCH------HHHHHHH
Confidence 3688999998 9999999997432 221 11 11134788999999986 5677666
Q ss_pred c-------CccEEEEcccccCc-------------chhHHHHHHHhHHHHHHHHHHHHhc---C------CCccEEEEec
Q psy7539 81 E-------TIHIVYHIAATVRF-------------DDYMQTYVFLNTRGTRDMLNLSKQM---I------HLQLFVYVST 131 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------------~~~~~~~~~~Nv~gt~~ll~~a~~~---~------~~~~~v~~SS 131 (318)
+ ++|+|||+||.... ...+...+++|+.++.++++++... . +..+||++||
T Consensus 78 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS 157 (265)
T 2o23_A 78 ALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS 157 (265)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred HHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCC
Confidence 5 89999999997522 2335678999999999999988753 1 3568999999
Q ss_pred cccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEec
Q psy7539 132 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILR 207 (318)
Q Consensus 132 ~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR 207 (318)
.+++... .+ ...|+.||.+.+.+.+.+.. .|+++++++
T Consensus 158 ~~~~~~~---------~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~ 199 (265)
T 2o23_A 158 VAAFEGQ---------VG-----------------------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIA 199 (265)
T ss_dssp THHHHCC---------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred hhhcCCC---------CC-----------------------------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEE
Confidence 8764321 01 16899999999988877654 489999999
Q ss_pred ccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 208 PSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 208 ~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
||.+.++..... +......+... .+ ....+++.+|+|++++.++..... .++.+++.++
T Consensus 200 Pg~v~t~~~~~~---------~~~~~~~~~~~----~~----~~~~~~~~~dva~~~~~l~~~~~~----~G~~i~vdgG 258 (265)
T 2o23_A 200 PGLFGTPLLTSL---------PEKVCNFLASQ----VP----FPSRLGDPAEYAHLVQAIIENPFL----NGEVIRLDGA 258 (265)
T ss_dssp ECCBCCC-------------------CHHHHT----CS----SSCSCBCHHHHHHHHHHHHHCTTC----CSCEEEESTT
T ss_pred eccccCcccccc---------CHHHHHHHHHc----CC----CcCCCCCHHHHHHHHHHHhhcCcc----CceEEEECCC
Confidence 998866421110 00000000110 00 113478999999999999865443 4789999877
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.3e-14 Score=122.49 Aligned_cols=207 Identities=11% Similarity=0.028 Sum_probs=136.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... +.+. ... .+ .++.+|++++ +++..++
T Consensus 20 ~~ia~~l~~~--G~~V~~~~r~~~~----~~~~-----------------~~~-~~-~~~~~D~~~~------~~~~~~~ 68 (256)
T 2d1y_A 20 RAIAQAFARE--GALVALCDLRPEG----KEVA-----------------EAI-GG-AFFQVDLEDE------RERVRFV 68 (256)
T ss_dssp HHHHHHHHHT--TCEEEEEESSTTH----HHHH-----------------HHH-TC-EEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCChhH----HHHH-----------------HHh-hC-CEEEeeCCCH------HHHHHHH
Confidence 3688999998 9999999996432 1111 111 14 7889999986 5666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 69 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----- 143 (256)
T 2d1y_A 69 EEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE----- 143 (256)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----
Confidence 4 78999999997532 1345678999999999999887542 256799999997664321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
++. ..|+.||.+.+.+.+.+.. .|+++.+++||.+.++..
T Consensus 144 ----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--- 187 (256)
T 2d1y_A 144 ----QEN-----------------------------AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV--- 187 (256)
T ss_dssp ----TTB-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---
T ss_pred ----CCC-----------------------------hhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh---
Confidence 011 6899999999999887764 489999999997754210
Q ss_pred CCcccCCCchHHHHHHHh-cCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 220 PGWTDNINGPTGLLIGAG-KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
..++.... ................+++++|+|++++.++...... ..+..|++.++ ...+
T Consensus 188 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~--~~G~~~~v~gG--~~~~ 248 (256)
T 2d1y_A 188 ----------LEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASF--ITGAILPVDGG--MTAS 248 (256)
T ss_dssp ----------HHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT--GGGB
T ss_pred ----------hhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC--CCCCEEEECCC--cccc
Confidence 00000000 0000000111222346899999999999988765321 24789999988 5444
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-14 Score=124.68 Aligned_cols=201 Identities=12% Similarity=0.067 Sum_probs=134.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++++.. .....++.++.+|+++. +.+..++
T Consensus 28 ~~~a~~l~~~--G~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 79 (249)
T 3f9i_A 28 SAIARLLHKL--GSKVIISGSNEE------KLKSLG--------------NALKDNYTIEVCNLANK------EECSNLI 79 (249)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHH--------------HHHCSSEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCHH------HHHHHH--------------HHhccCccEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999522 222211 22235788999999986 5677776
Q ss_pred c---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCC
Q psy7539 81 E---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 81 ~---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..++...
T Consensus 80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 150 (249)
T 3f9i_A 80 SKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN--------- 150 (249)
T ss_dssp HTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC---------
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC---------
Confidence 6 68999999997532 2345678999999999998877432 245689999997765321
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcc
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWT 223 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~ 223 (318)
.+ ...|+.||.+.+.+.+.+.. +|+++.+++||.|.+....
T Consensus 151 ~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~------ 195 (249)
T 3f9i_A 151 PG-----------------------------QANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTD------ 195 (249)
T ss_dssp SC-----------------------------SHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC-----------
T ss_pred CC-----------------------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccc------
Confidence 01 17899999999988877654 5899999999988664321
Q ss_pred cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 224 DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+ . ......+.. ......+.+++|+|++++.++...... ..+++|++.++
T Consensus 196 -~~-~-~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~s~~~~~--~tG~~~~vdgG 245 (249)
T 3f9i_A 196 -KL-N-EKQREAIVQ---------KIPLGTYGIPEDVAYAVAFLASNNASY--ITGQTLHVNGG 245 (249)
T ss_dssp --C-C-HHHHHHHHH---------HCTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -cc-C-HHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCCccCC--ccCcEEEECCC
Confidence 11 1 111111111 112346889999999999998765431 24889999887
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.9e-14 Score=123.08 Aligned_cols=210 Identities=17% Similarity=0.115 Sum_probs=133.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++++.. .+...++.++.+|+++. +++..++
T Consensus 23 ~~~a~~l~~~--G~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 74 (261)
T 3n74_A 23 EGMAKRFAKG--GAKVVIVDRDKA------GAERVA--------------GEIGDAALAVAADISKE------ADVDAAV 74 (261)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHH--------------HHHCTTEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCHH------HHHHHH--------------HHhCCceEEEEecCCCH------HHHHHHH
Confidence 3689999998 999999999532 222211 22235789999999986 5666655
Q ss_pred c-------CccEEEEcccccC--------cchhHHHHHHHhHHHHHHHHHHHHhcC-------CCccEEEEeccccccCC
Q psy7539 81 E-------TIHIVYHIAATVR--------FDDYMQTYVFLNTRGTRDMLNLSKQMI-------HLQLFVYVSTAYCHPKE 138 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~~-------~~~~~v~~SS~~~~~~~ 138 (318)
+ ++|+|||+||... ....++..+++|+.|+.++++++...- ...+||++||..++...
T Consensus 75 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 154 (261)
T 3n74_A 75 EAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR 154 (261)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC
T ss_pred HHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC
Confidence 4 7899999999753 123456689999999999888875420 13359999997664321
Q ss_pred cccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccc
Q psy7539 139 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPI 214 (318)
Q Consensus 139 ~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~ 214 (318)
| ....|+.||.+.+.+.+.+.. +++++.+++||.+.++
T Consensus 155 ----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 196 (261)
T 3n74_A 155 ----------P----------------------------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETP 196 (261)
T ss_dssp ----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----
T ss_pred ----------C----------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCh
Confidence 0 016799999999999887765 5899999999988664
Q ss_pred cCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeH
Q psy7539 215 WKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITW 294 (318)
Q Consensus 215 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~ 294 (318)
..... .+.. .. ..............+++++|+|++++.++...... ..+.++++.++ ..++.
T Consensus 197 ~~~~~-------~~~~------~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~--itG~~i~vdgG--~~~~~ 258 (261)
T 3n74_A 197 LLTTF-------MGED------SE-EIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASM--ITGVALDVDGG--RSIGG 258 (261)
T ss_dssp ----------------------------------CTTSSCCCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT--TTC--
T ss_pred hhhhh-------cccC------cH-HHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccC--cCCcEEEecCC--cccCC
Confidence 32111 0000 00 00001112223346899999999999988654421 24889999988 55543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-13 Score=119.05 Aligned_cols=206 Identities=12% Similarity=0.064 Sum_probs=136.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. .+...++ .....++.++.+|++++ +++..++
T Consensus 18 ~~ia~~l~~~--G~~V~~~~r~~~----~~~~~~l---------------~~~~~~~~~~~~D~~~~------~~v~~~~ 70 (255)
T 2q2v_A 18 LGIAQVLARA--GANIVLNGFGDP----APALAEI---------------ARHGVKAVHHPADLSDV------AQIEALF 70 (255)
T ss_dssp HHHHHHHHHT--TCEEEEECSSCC----HHHHHHH---------------HTTSCCEEEECCCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCch----HHHHHHH---------------HhcCCceEEEeCCCCCH------HHHHHHH
Confidence 3688999998 999999999654 1111211 11134688899999986 5777776
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++.+++ ++ .+..+||++||..++....
T Consensus 71 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~--- 146 (255)
T 2q2v_A 71 ALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA-RNWGRIINIASVHGLVGST--- 146 (255)
T ss_dssp HHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEEEEECCGGGTSCCT---
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCcEEEEEcCchhccCCC---
Confidence 6 89999999997432 2345678999999877766655 44 3568999999987653210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+ ...|+.||.+.+.+.+.+.. .|+++++++||.+.++...
T Consensus 147 ------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~- 190 (255)
T 2q2v_A 147 ------G-----------------------------KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ- 190 (255)
T ss_dssp ------T-----------------------------BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH-
T ss_pred ------C-----------------------------chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh-
Confidence 0 16899999999999887765 4799999999988663210
Q ss_pred CCCcccCCCchHHHH---HHHhcCc---eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLL---IGAGKGI---IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ....... ...+.........+++++|+|++++.++...... ..++.|++.++
T Consensus 191 ------------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~--~tG~~~~vdgG 251 (255)
T 2q2v_A 191 ------------KQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQ--VRGAAWNVDGG 251 (255)
T ss_dssp ------------HHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred ------------hhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCC--CCCCEEEECCC
Confidence 000 0000000 0000011122346899999999999988764421 14789999877
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-14 Score=126.09 Aligned_cols=226 Identities=9% Similarity=0.005 Sum_probs=143.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCC------HHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKN------SRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAE 74 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~------~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~ 74 (318)
++++++|+++ |++|+++.|+..... ..+++++... .+ .....++.++.+|++++ +
T Consensus 24 ~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~D~~~~------~ 84 (287)
T 3pxx_A 24 RSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGL-----EV------EKTGRKAYTAEVDVRDR------A 84 (287)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHH-----HH------HHTTSCEEEEECCTTCH------H
T ss_pred HHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHH-----HH------HhcCCceEEEEccCCCH------H
Confidence 3688999998 999999998632211 1222222211 00 22245889999999986 5
Q ss_pred HHHHHhc-------CccEEEEcccccCc-----chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCc--
Q psy7539 75 DRQMLSE-------TIHIVYHIAATVRF-----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEK-- 139 (318)
Q Consensus 75 ~~~~~~~-------~~d~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~-- 139 (318)
++..+++ ++|++||+||.... ...++..+++|+.|+.++++++... .+..++|++||..++....
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 164 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQP 164 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccc
Confidence 6666554 79999999998532 2446679999999999999999864 1234899999976643211
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
+..+.. + .... ..|+.||.+.+.+.+.++. +|+++.+++||.|.++.
T Consensus 165 ~~~~~~---~--------------------~~~~------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 215 (287)
T 3pxx_A 165 PGAGGP---Q--------------------GPGG------AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDM 215 (287)
T ss_dssp C--------C--------------------HHHH------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTT
T ss_pred cccccc---C--------------------CCcc------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 111100 0 0000 6899999999999887765 48999999999987643
Q ss_pred CCCCCCcccCCCchHHHHHHHhcC---c-----eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKG---I-----IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .......... . ..........+..+.+++|+|++++.++...... ..+.++++.++
T Consensus 216 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~--itG~~i~vdGG 282 (287)
T 3pxx_A 216 LNS-----------APMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRY--VTGLQFKVDAG 282 (287)
T ss_dssp TSS-----------HHHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ccc-----------cchhhhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcC--CCCceEeECch
Confidence 211 0000000000 0 0000011122267899999999999988654421 24889999888
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-14 Score=123.92 Aligned_cols=204 Identities=11% Similarity=0.029 Sum_probs=139.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 19 ~~~a~~l~~~--G~~v~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 73 (247)
T 3lyl_A 19 FEVAHALASK--GATVVGTATSQA---SAEKFENSM--------------KEKGFKARGLVLNISDI------ESIQNFF 73 (247)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHH---HHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCceEEEEecCCCH------HHHHHHH
Confidence 3688999998 999999999532 112222111 12235789999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..+....
T Consensus 74 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 148 (247)
T 3lyl_A 74 AEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN----- 148 (247)
T ss_dssp HHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----
Confidence 4 57999999997532 2345678999999999999887542 244689999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
+. ...|+.||.+.+.+.+.+.. +|+++.+++||.+.++...
T Consensus 149 ----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-- 193 (247)
T 3lyl_A 149 ----PG-----------------------------QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTD-- 193 (247)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTT--
T ss_pred ----CC-----------------------------cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccch--
Confidence 00 17899999988888877654 5899999999988664321
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+ . ........ .......+.+++|+|++++.++...... ..+++|++.++
T Consensus 194 -----~~-~-~~~~~~~~---------~~~~~~~~~~~~dva~~i~~l~s~~~~~--~tG~~i~vdgG 243 (247)
T 3lyl_A 194 -----KL-T-DEQKSFIA---------TKIPSGQIGEPKDIAAAVAFLASEEAKY--ITGQTLHVNGG 243 (247)
T ss_dssp -----TS-C-HHHHHHHH---------TTSTTCCCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hc-c-HHHHHHHh---------hcCCCCCCcCHHHHHHHHHHHhCCCcCC--ccCCEEEECCC
Confidence 11 1 11111111 1223346889999999999988765431 24889999887
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=4.1e-14 Score=122.18 Aligned_cols=207 Identities=15% Similarity=0.077 Sum_probs=137.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+. + .....++.++.+|++++ +++..++
T Consensus 23 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~--------~------~~~~~~~~~~~~D~~~~------~~~~~~~ 77 (260)
T 2ae2_A 23 YGIVEELASL--GASVYTCSRNQK---ELNDCLTQ--------W------RSKGFKVEASVCDLSSR------SERQELM 77 (260)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHH--------H------HHTTCEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHH--------H------HhcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999532 11111111 0 11134788999999986 5666665
Q ss_pred --------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 --------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 --------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 78 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 153 (260)
T 2ae2_A 78 NTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV---- 153 (260)
T ss_dssp HHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----
Confidence 479999999997432 2345678999999999999988421 256799999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
++ ...|+.||.+.|.+.+.+.. +|+++++++||.+.++....
T Consensus 154 -----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 199 (260)
T 2ae2_A 154 -----PY-----------------------------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM 199 (260)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH
T ss_pred -----CC-----------------------------cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh
Confidence 01 16899999999999988765 48999999999886532100
Q ss_pred CCCcccCCCchH--HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPT--GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....+. ..+..+... .....+++++|+|++++.++...... ..+.++++.++
T Consensus 200 ------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~v~~l~s~~~~~--~tG~~~~vdgG 253 (260)
T 2ae2_A 200 ------TIQDPEQKENLNKLIDR---------CALRRMGEPKELAAMVAFLCFPAASY--VTGQIIYVDGG 253 (260)
T ss_dssp ------HTTSHHHHHHHHHHHHT---------STTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------hccChhhHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCccccC--CCCCEEEECCC
Confidence 000110 111111111 12235889999999999888654321 24789999887
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.1e-14 Score=121.73 Aligned_cols=209 Identities=10% Similarity=0.070 Sum_probs=137.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++.+.. .....++.++.+|++++ +++..++
T Consensus 26 ~~ia~~l~~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~D~~d~------~~v~~~~ 77 (263)
T 3ak4_A 26 AAIARALDKA--GATVAIADLDV------MAAQAVV--------------AGLENGGFAVEVDVTKR------ASVDAAM 77 (263)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HTCTTCCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHH--------------HHHhcCCeEEEEeCCCH------HHHHHHH
Confidence 3688999998 99999999953 1222211 11122678899999986 5677666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+ ..+||++||..+....
T Consensus 78 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 153 (263)
T 3ak4_A 78 QKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA---- 153 (263)
T ss_dssp HHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC----
Confidence 5 79999999997432 1345678999999999999887642 13 5799999997664321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
++. ..|+.||.+.+.+.+.+.. .|++++++|||.+.++....
T Consensus 154 -----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 199 (263)
T 3ak4_A 154 -----PLL-----------------------------AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQER 199 (263)
T ss_dssp -----TTC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHH
T ss_pred -----CCc-----------------------------hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhh
Confidence 011 6899999999998887754 48999999999886632100
Q ss_pred CCCc---ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGW---TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...+ ..+. ........+.. ......+++++|+|++++.++...... ..+.+|++.++
T Consensus 200 ~~~~~~~~~~~-~~~~~~~~~~~---------~~p~~~~~~~~dvA~~v~~l~s~~~~~--~tG~~~~vdgG 259 (263)
T 3ak4_A 200 EIIWEAELRGM-TPEAVRAEYVS---------LTPLGRIEEPEDVADVVVFLASDAARF--MTGQGINVTGG 259 (263)
T ss_dssp HHHHHHHHHTS-CHHHHHHHHHH---------TCTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESSS
T ss_pred hcccccccccc-CcHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCccccC--CCCCEEEECcC
Confidence 0000 0000 00011111111 112235899999999999998765321 24789999887
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-13 Score=120.06 Aligned_cols=201 Identities=15% Similarity=0.098 Sum_probs=140.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+.. .....++.++.+|++++ +++..++
T Consensus 25 ~aia~~l~~~--G~~V~~~~r~~~~--~~~~~------------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 76 (271)
T 3tzq_B 25 LETSRVLARA--GARVVLADLPETD--LAGAA------------------ASVGRGAVHHVVDLTNE------VSVRALI 76 (271)
T ss_dssp HHHHHHHHHT--TCEEEEEECTTSC--HHHHH------------------HHHCTTCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCHHH--HHHHH------------------HHhCCCeEEEECCCCCH------HHHHHHH
Confidence 3688999998 9999999997432 22211 11235788999999986 5677666
Q ss_pred c-------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~ 140 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++ ++ .+..+||++||..++...
T Consensus 77 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~iv~isS~~~~~~~-- 153 (271)
T 3tzq_B 77 DFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLIS-AGGGAIVNISSATAHAAY-- 153 (271)
T ss_dssp HHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCEEEEEECCGGGTSBC--
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCEEEEECCHHHcCCC--
Confidence 5 79999999997522 1335678999999999999988 44 356799999997764321
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++..
T Consensus 154 -------~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~ 197 (271)
T 3tzq_B 154 -------DM-----------------------------STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRL 197 (271)
T ss_dssp -------SS-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred -------CC-----------------------------ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccc
Confidence 11 17899999999999887765 589999999999977532
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .. +......+... ....-+...+|+|++++.++...... ..+.++++.++
T Consensus 198 ~~------~~--~~~~~~~~~~~---------~~~~r~~~p~dvA~~v~~L~s~~~~~--itG~~i~vdGG 249 (271)
T 3tzq_B 198 EV------GL--PQPIVDIFATH---------HLAGRIGEPHEIAELVCFLASDRAAF--ITGQVIAADSG 249 (271)
T ss_dssp C-----------CHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred cc------cC--CHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccCC--cCCCEEEECCC
Confidence 10 11 12222222221 11234678999999999988765431 24889999887
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-13 Score=119.59 Aligned_cols=206 Identities=13% Similarity=0.025 Sum_probs=139.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .....++.++.+|++++ +++..++
T Consensus 24 ~aia~~l~~~--G~~V~~~~r~~~---~~~~~~~~l~-------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 79 (262)
T 3pk0_A 24 RGIATVFARA--GANVAVAGRSTA---DIDACVADLD-------------QLGSGKVIGVQTDVSDR------AQCDALA 79 (262)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH-------------TTSSSCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHH-------------hhCCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999532 1111111111 11125789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..++|++||..+....
T Consensus 80 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----- 154 (262)
T 3pk0_A 80 GRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG----- 154 (262)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC-----
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC-----
Confidence 4 79999999997521 2345678999999999998887653 245799999997653110
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.++ ...|+.||.+.+.+.+.++. +|+++.+++||.+.++....
T Consensus 155 ---~~~-----------------------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~- 201 (262)
T 3pk0_A 155 ---YPG-----------------------------WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE- 201 (262)
T ss_dssp ---CTT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT-
T ss_pred ---CCC-----------------------------ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc-
Confidence 001 17899999999999988765 58999999999887642110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....+...+.... ...-+...+|+|+++..++...... ..+.++++.++
T Consensus 202 --------~~~~~~~~~~~~~---------p~~r~~~p~dva~~v~~L~s~~~~~--itG~~i~vdGG 250 (262)
T 3pk0_A 202 --------NGEEYIASMARSI---------PAGALGTPEDIGHLAAFLATKEAGY--ITGQAIAVDGG 250 (262)
T ss_dssp --------TCHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred --------cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccC--CcCCEEEECCC
Confidence 0112222232221 1224778999999999988765421 24889999888
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=3e-14 Score=123.56 Aligned_cols=214 Identities=13% Similarity=0.056 Sum_probs=143.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.. ....++.++.+|++++ +++..++
T Consensus 30 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~---------------~~~~~~~~~~~Dv~~~------~~v~~~~ 83 (271)
T 3ek2_A 30 YGIAKACKRE--GAELAFTYVGDR---FKDRITEFA---------------AEFGSELVFPCDVADD------AQIDALF 83 (271)
T ss_dssp HHHHHHHHHT--TCEEEEEESSGG---GHHHHHHHH---------------HHTTCCCEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHc--CCCEEEEecchh---hHHHHHHHH---------------HHcCCcEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999999632 233333321 1123588999999986 5666665
Q ss_pred c-------CccEEEEcccccCc------------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRF------------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~ 140 (318)
+ ++|++||+||.... ...+...+++|+.|+.++++++... ....++|++||..+....
T Consensus 84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-- 161 (271)
T 3ek2_A 84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI-- 161 (271)
T ss_dssp HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC--
T ss_pred HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC--
Confidence 4 68999999997532 2335578999999999999999763 112489999997764321
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
.+ ...|+.||.+.+.+.+.+.. .|+++.+++||.|.....
T Consensus 162 -------~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 205 (271)
T 3ek2_A 162 -------PN-----------------------------YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAA 205 (271)
T ss_dssp -------TT-----------------------------TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----
T ss_pred -------CC-----------------------------ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhh
Confidence 01 17899999999999887765 589999999998866432
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHH
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYD 296 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~e 296 (318)
. ...........+... .....+...+|+|++++.++...... ..+.++++.++ ...++.+
T Consensus 206 ~-------~~~~~~~~~~~~~~~---------~~~~~~~~pedva~~i~~l~s~~~~~--~tG~~i~vdgG--~~~~~~~ 265 (271)
T 3ek2_A 206 S-------GIKSFGKILDFVESN---------SPLKRNVTIEQVGNAGAFLLSDLASG--VTAEVMHVDSG--FNAVVGG 265 (271)
T ss_dssp C-------CCHHHHHHHHHHHHH---------STTSSCCCHHHHHHHHHHHHSGGGTT--CCSEEEEESTT--GGGBCCC
T ss_pred h-------cccchHHHHHHHHhc---------CCcCCCCCHHHHHHHHHHHcCcccCC--eeeeEEEECCC--eeeehhh
Confidence 1 111111222222221 11234678999999999998764321 24889999998 6666655
Q ss_pred HH
Q psy7539 297 II 298 (318)
Q Consensus 297 l~ 298 (318)
+.
T Consensus 266 ~~ 267 (271)
T 3ek2_A 266 MA 267 (271)
T ss_dssp C-
T ss_pred hh
Confidence 53
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=3.7e-14 Score=121.91 Aligned_cols=203 Identities=13% Similarity=0.089 Sum_probs=134.5
Q ss_pred ChhHHHHHhhCCCcE-EEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVK-IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~-V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++++++|+++ |++ |+++.|+... +.+.++.+ .....+++++.+|++++. +++..+
T Consensus 19 ~~~a~~l~~~--G~~~v~~~~r~~~~----~~~~~l~~-------------~~~~~~~~~~~~D~~~~~-----~~~~~~ 74 (254)
T 1sby_A 19 LDTSRELVKR--NLKNFVILDRVENP----TALAELKA-------------INPKVNITFHTYDVTVPV-----AESKKL 74 (254)
T ss_dssp HHHHHHHHHT--CCSEEEEEESSCCH----HHHHHHHH-------------HCTTSEEEEEECCTTSCH-----HHHHHH
T ss_pred HHHHHHHHHC--CCcEEEEEecCchH----HHHHHHHH-------------hCCCceEEEEEEecCCCh-----HHHHHH
Confidence 3688999998 885 9999996431 22222210 001247889999999751 244444
Q ss_pred hc-------CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcC---C---CccEEEEeccccccCCcccccccC
Q psy7539 80 SE-------TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMI---H---LQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---~---~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
++ ++|+|||+||... ...++..+++|+.|+.++++++...- + ..+||++||..++...
T Consensus 75 ~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 145 (254)
T 1sby_A 75 LKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-------- 145 (254)
T ss_dssp HHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC--------
T ss_pred HHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC--------
Confidence 33 7999999999754 34566899999999999999886421 1 3469999998775321
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCc
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
.+ ...|+.||.+.|.+...+.. .|+++++++||.+.++.......|
T Consensus 146 -~~-----------------------------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~ 195 (254)
T 1sby_A 146 -HQ-----------------------------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSW 195 (254)
T ss_dssp -TT-----------------------------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCG
T ss_pred -CC-----------------------------chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchh
Confidence 00 16899999999999887654 489999999998876432111111
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... . ..+..... ...+.+++|+|++++.++.... .+..|++.++
T Consensus 196 ~~~--~--~~~~~~~~------------~~~~~~~~dvA~~i~~~~~~~~-----~G~~~~v~gG 239 (254)
T 1sby_A 196 LDV--E--PRVAELLL------------SHPTQTSEQCGQNFVKAIEANK-----NGAIWKLDLG 239 (254)
T ss_dssp GGS--C--TTHHHHHT------------TSCCEEHHHHHHHHHHHHHHCC-----TTCEEEEETT
T ss_pred hhh--h--HHHHHHHh------------cCCCCCHHHHHHHHHHHHHcCC-----CCCEEEEeCC
Confidence 000 0 00111111 1234489999999999987543 3789999887
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-14 Score=125.27 Aligned_cols=210 Identities=13% Similarity=0.037 Sum_probs=138.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+. + .....++.++.+|++++ +++..++
T Consensus 28 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~--------l------~~~~~~~~~~~~D~~~~------~~~~~~~ 82 (260)
T 2zat_A 28 LAIARRLAQD--GAHVVVSSRKQE---NVDRTVAT--------L------QGEGLSVTGTVCHVGKA------EDRERLV 82 (260)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHH--------H------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHH--------H------HhcCCceEEEEccCCCH------HHHHHHH
Confidence 3688999998 999999999532 11111111 1 11134688899999976 5666655
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 83 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 158 (260)
T 2zat_A 83 AMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF---- 158 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC----
Confidence 4 79999999996421 1335678999999999988887521 356799999998775421
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+. ..|+.||.+.+.+.+.+.. +|+++.+++||.+.++...
T Consensus 159 -----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~- 203 (260)
T 2zat_A 159 -----PNL-----------------------------GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ- 203 (260)
T ss_dssp -----TTB-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH-
T ss_pred -----CCc-----------------------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch-
Confidence 011 6899999999999988755 4899999999988653210
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
...........+.. ......+.+++|+|+++..++...... ..+++|++.++ ...+
T Consensus 204 ------~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~v~~l~s~~~~~--~tG~~~~vdgG--~~~s 259 (260)
T 2zat_A 204 ------VLWMDKARKEYMKE---------SLRIRRLGNPEDCAGIVSFLCSEDASY--ITGETVVVGGG--TASR 259 (260)
T ss_dssp ------HHHSSHHHHHHHHH---------HHTCSSCBCGGGGHHHHHHHTSGGGTT--CCSCEEEESTT--CCCC
T ss_pred ------hcccChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCcccCC--ccCCEEEECCC--cccc
Confidence 00000000001111 011235889999999999998765421 13789999988 5554
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.8e-13 Score=119.10 Aligned_cols=208 Identities=8% Similarity=0.017 Sum_probs=136.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEc-cCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLR-PKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R-~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++++++|+++ |++|+++.| +.. ..+.+.+.+. .....++.++.+|++++.- ..+++..+
T Consensus 25 ~~ia~~l~~~--G~~V~~~~r~~~~---~~~~~~~~~~-------------~~~~~~~~~~~~Dl~~~~~--~~~~~~~~ 84 (276)
T 1mxh_A 25 HSIAVRLHQQ--GFRVVVHYRHSEG---AAQRLVAELN-------------AARAGSAVLCKGDLSLSSS--LLDCCEDI 84 (276)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCHH---HHHHHHHHHH-------------HHSTTCEEEEECCCSSSTT--HHHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCChH---HHHHHHHHHH-------------HhcCCceEEEeccCCCccc--cHHHHHHH
Confidence 3688999998 999999998 421 1111111110 1113478899999997610 00244444
Q ss_pred hc-------CccEEEEcccccCcc------------------hhHHHHHHHhHHHHHHHHHHHHhc--CCC------ccE
Q psy7539 80 SE-------TIHIVYHIAATVRFD------------------DYMQTYVFLNTRGTRDMLNLSKQM--IHL------QLF 126 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~~------------------~~~~~~~~~Nv~gt~~ll~~a~~~--~~~------~~~ 126 (318)
++ ++|+|||+||..... ..++..+++|+.|+.++++++... .+. .+|
T Consensus 85 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~i 164 (276)
T 1mxh_A 85 IDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV 164 (276)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence 43 789999999974221 445678999999999999998863 123 689
Q ss_pred EEEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCc
Q psy7539 127 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 202 (318)
Q Consensus 127 v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~ 202 (318)
|++||..++... .+ ...|+.||.+.+.+.+.+.. +|++
T Consensus 165 v~isS~~~~~~~---------~~-----------------------------~~~Y~asK~a~~~l~~~la~e~~~~gi~ 206 (276)
T 1mxh_A 165 VNLCDAMTDLPL---------PG-----------------------------FCVYTMAKHALGGLTRAAALELAPRHIR 206 (276)
T ss_dssp EEECCGGGGSCC---------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECchhhcCCC---------CC-----------------------------CeehHHHHHHHHHHHHHHHHHHhhcCeE
Confidence 999998765321 01 16899999999999887754 4899
Q ss_pred EEEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEE
Q psy7539 203 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 282 (318)
Q Consensus 203 ~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ 282 (318)
+++++||.+.++ . .+ . ......+.... ...+++.+++|+|++++.++...... ..+.+|
T Consensus 207 v~~v~PG~v~t~-~--------~~-~-~~~~~~~~~~~--------p~~r~~~~~~dva~~v~~l~s~~~~~--~tG~~~ 265 (276)
T 1mxh_A 207 VNAVAPGLSLLP-P--------AM-P-QETQEEYRRKV--------PLGQSEASAAQIADAIAFLVSKDAGY--ITGTTL 265 (276)
T ss_dssp EEEEEESSBSCC-S--------SS-C-HHHHHHHHTTC--------TTTSCCBCHHHHHHHHHHHHSGGGTT--CCSCEE
T ss_pred EEEEecCcccCC-c--------cC-C-HHHHHHHHhcC--------CCCCCCCCHHHHHHHHHHHhCccccC--ccCcEE
Confidence 999999999775 1 11 1 12222222210 11233889999999999998754321 247889
Q ss_pred EeeCC
Q psy7539 283 NLTAN 287 (318)
Q Consensus 283 ni~~~ 287 (318)
++.++
T Consensus 266 ~vdgG 270 (276)
T 1mxh_A 266 KVDGG 270 (276)
T ss_dssp EESTT
T ss_pred EECCc
Confidence 99877
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5.7e-14 Score=120.39 Aligned_cols=204 Identities=11% Similarity=0.030 Sum_probs=134.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .. ..+++++.+|++++ +++..++
T Consensus 20 ~~~a~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~-~~~~~~~~~D~~~~------~~~~~~~ 73 (251)
T 1zk4_A 20 LAIATKFVEE--GAKVMITGRHSD---VGEKAAKSV--------------GT-PDQIQFFQHDSSDE------DGWTKLF 73 (251)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------CC-TTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHh--------------hc-cCceEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999999532 111111111 11 14789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCC-ccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHL-QLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~-~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++.+++... .+. .+||++||..++...
T Consensus 74 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---- 149 (251)
T 1zk4_A 74 DATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD---- 149 (251)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC----
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC----
Confidence 4 58999999997421 2345678999999887766654321 245 799999998765421
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEecccccccccC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G~~~ 216 (318)
++. ..|+.||.+.|.+...+.. .+++++++|||.++++..
T Consensus 150 -----~~~-----------------------------~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~ 195 (251)
T 1zk4_A 150 -----PSL-----------------------------GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLV 195 (251)
T ss_dssp -----TTC-----------------------------HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHH
T ss_pred -----CCC-----------------------------ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhh
Confidence 111 7899999999998876542 479999999999877532
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ... ........ .......+++++|+|++++.++...... ..+..|++.++
T Consensus 196 ~~-------~~~--~~~~~~~~--------~~~~~~~~~~~~dva~~~~~l~~~~~~~--~~G~~~~v~gG 247 (251)
T 1zk4_A 196 DD-------LPG--AEEAMSQR--------TKTPMGHIGEPNDIAYICVYLASNESKF--ATGSEFVVDGG 247 (251)
T ss_dssp HT-------STT--HHHHHTST--------TTCTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred hh-------cCc--hhhhHHHh--------hcCCCCCCcCHHHHHHHHHHHcCccccc--ccCcEEEECCC
Confidence 11 111 11111011 1111235899999999999998764321 14789999887
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.9e-14 Score=126.21 Aligned_cols=222 Identities=12% Similarity=0.134 Sum_probs=135.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|++.+|+....+ .+++++..+ .+ .....++.++.+|++++ +++..++
T Consensus 19 ~aia~~L~~~--G~~V~~~~r~~~~r~-~~~~~~l~~-----~~------~~~~~~~~~~~~Dvtd~------~~v~~~~ 78 (324)
T 3u9l_A 19 RLTAEALAGA--GHRVYASMRDIVGRN-ASNVEAIAG-----FA------RDNDVDLRTLELDVQSQ------VSVDRAI 78 (324)
T ss_dssp HHHHHHHHHT--TCEEEEEESCTTTTT-HHHHHHHHH-----HH------HHHTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEecCcccccC-HHHHHHHHH-----HH------HhcCCcEEEEEeecCCH------HHHHHHH
Confidence 3688999998 999999999643222 223322211 00 12235789999999986 5777666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++ ++. +..++|++||..+....
T Consensus 79 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~iV~isS~~~~~~~---- 153 (324)
T 3u9l_A 79 DQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLLIWISSSSSAGGT---- 153 (324)
T ss_dssp HHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEecchhccCC----
Confidence 5 89999999996421 2345678999999999999988 442 56799999997765321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.| ....|+.||.+.|.+.+.+.. .|+++++++||.+.+.....
T Consensus 154 -----~~----------------------------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~ 200 (324)
T 3u9l_A 154 -----PP----------------------------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHF 200 (324)
T ss_dssp -----CS----------------------------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-------
T ss_pred -----CC----------------------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhh
Confidence 00 016799999999999988765 58999999999987543211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecC-----CCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCD-----YSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 286 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~ 286 (318)
... ...........+..+.....+.. .....+..+++|+|++++.++..+... ....+.++.
T Consensus 201 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~---~~~~~~~gp 267 (324)
T 3u9l_A 201 AHS---GVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGK---RPFRVHVDP 267 (324)
T ss_dssp --C---BCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTC---CCSEEEECT
T ss_pred ccc---CCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCC---CCeEEEeCC
Confidence 000 00000111111111000000000 000113368899999999999877431 244666654
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.58 E-value=5.5e-14 Score=123.41 Aligned_cols=209 Identities=15% Similarity=0.056 Sum_probs=136.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++++.. .....+++++.+|++++ +++..++
T Consensus 30 ~~~a~~L~~~--G~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~Dl~d~------~~v~~~~ 81 (291)
T 3rd5_A 30 AVTARELARR--GATVIMAVRDTR------KGEAAA--------------RTMAGQVEVRELDLQDL------SSVRRFA 81 (291)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHH--------------TTSSSEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH------HHHHHH--------------HHhcCCeeEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999532 222221 22245899999999986 6788877
Q ss_pred c---CccEEEEcccccCc-----chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccc-cCCCCCC
Q psy7539 81 E---TIHIVYHIAATVRF-----DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEK-TYPPPVS 151 (318)
Q Consensus 81 ~---~~d~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~-~~~~p~~ 151 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... ..++||++||..++.......+. ....+..
T Consensus 82 ~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~isS~~~~~~~~~~~~~~~~~~~~~ 160 (291)
T 3rd5_A 82 DGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVSSMAHWPGRINLEDLNWRSRRYS 160 (291)
T ss_dssp HTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEECCGGGTTCCCCSSCTTCSSSCCC
T ss_pred HhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEeechhhccCCCCcccccccccCCC
Confidence 6 67999999997532 2334578999999999999999975 56799999998765432111110 0001111
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cC--CcEEEecccccccccCCCCCCcccC
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AG--MPCMILRPSIIIPIWKDPLPGWTDN 225 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~--~~~~ilR~~~v~G~~~~~~~g~~~~ 225 (318)
+. ..|+.||.+.+.+.+.+.. .| +++..++||.|..+.....
T Consensus 161 ~~--------------------------~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~------ 208 (291)
T 3rd5_A 161 PW--------------------------LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS------ 208 (291)
T ss_dssp HH--------------------------HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------
T ss_pred Cc--------------------------chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc------
Confidence 11 6899999999999887765 35 8999999998855321110
Q ss_pred CCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC
Q psy7539 226 INGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 286 (318)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~ 286 (318)
+..+..... .....+-..+.+|+|.+++.++..+.. .+..|++.+
T Consensus 209 ---~~~~~~~~~---------~~~~~~~~~~~~~~A~~~~~l~~~~~~----~G~~~~vdg 253 (291)
T 3rd5_A 209 ---GRKLGDALM---------SAATRVVATDADFGARQTLYAASQDLP----GDSFVGPRF 253 (291)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHSCCC----TTCEEEETT
T ss_pred ---chHHHHHHH---------HHHHHHHhCCHHHHHHHHHHHHcCCCC----CCceeCCcc
Confidence 000000000 111223445799999999999887543 477888754
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.6e-13 Score=117.97 Aligned_cols=200 Identities=12% Similarity=-0.007 Sum_probs=133.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++.+.. .+...++.++.+|++++ +++..++
T Consensus 19 ~~ia~~l~~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 70 (254)
T 1hdc_A 19 AEAARQAVAA--GARVVLADVLD------EEGAATA--------------RELGDAARYQHLDVTIE------EDWQRVV 70 (254)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HTTGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHH--------------HHhCCceeEEEecCCCH------HHHHHHH
Confidence 3688999998 99999999952 2222221 11134688899999986 5676666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHH----HHHhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLN----LSKQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~----~a~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+..+.+ .+++. +..+||++||..++...
T Consensus 71 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---- 145 (254)
T 1hdc_A 71 AYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGL---- 145 (254)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhccCC----
Confidence 5 79999999997532 23456789999999885554 44443 56899999998765321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
++ ...|+.||.+.+.+.+.+.. .|++++++|||.+.++...
T Consensus 146 -----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~- 190 (254)
T 1hdc_A 146 -----AL-----------------------------TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA- 190 (254)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-
T ss_pred -----CC-----------------------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccc-
Confidence 01 17899999999998887654 5899999999988663210
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcc-hHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFL-PVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.........+. .......+. +.+|+|++++.++...... ..+..+++.++
T Consensus 191 ----------------~~~~~~~~~~~-~~~p~~~~~~~~~dvA~~v~~l~s~~~~~--~tG~~~~vdgG 241 (254)
T 1hdc_A 191 ----------------ETGIRQGEGNY-PNTPMGRVGNEPGEIAGAVVKLLSDTSSY--VTGAELAVDGG 241 (254)
T ss_dssp ----------------HHTCCCSTTSC-TTSTTSSCB-CHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ----------------ccchhHHHHHH-hcCCCCCCCCCHHHHHHHHHHHhCchhcC--CCCCEEEECCC
Confidence 00000000000 001112367 9999999999988765321 24788998877
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.5e-14 Score=124.85 Aligned_cols=207 Identities=12% Similarity=0.037 Sum_probs=139.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.... ..+.+.+.. .....++.++.+|++++ +++..++
T Consensus 63 ~aia~~la~~--G~~V~~~~~~~~~~-~~~~~~~~~--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 119 (294)
T 3r3s_A 63 RAAAIAYARE--GADVAINYLPAEEE-DAQQVKALI--------------EECGRKAVLLPGDLSDE------SFARSLV 119 (294)
T ss_dssp HHHHHHHHHT--TCEEEEECCGGGHH-HHHHHHHHH--------------HHTTCCEEECCCCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCcchh-HHHHHHHHH--------------HHcCCcEEEEEecCCCH------HHHHHHH
Confidence 3688999998 99999988853211 122222211 22235788999999986 5666554
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcCCC--ccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQMIHL--QLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~--~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... -. .+||++||..++....
T Consensus 120 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~~g~Iv~isS~~~~~~~~---- 194 (294)
T 3r3s_A 120 HKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPL-LPKGASIITTSSIQAYQPSP---- 194 (294)
T ss_dssp HHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-CCTTCEEEEECCGGGTSCCT----
T ss_pred HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH-hhcCCEEEEECChhhccCCC----
Confidence 3 78999999997421 2345678999999999999999864 23 3899999987754310
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
. ...|+.||.+.+.+.+.++. +|+++.+++||.|.++.....
T Consensus 195 -----~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~ 240 (294)
T 3r3s_A 195 -----H-----------------------------LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG 240 (294)
T ss_dssp -----T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTT
T ss_pred -----C-----------------------------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccccc
Confidence 0 16899999999999887765 489999999998876431000
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ... . ..........+...+|+|++++.++...... ..+.++++.++
T Consensus 241 -----~~~~--~~~----~-----~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~--itG~~i~vdGG 290 (294)
T 3r3s_A 241 -----GQTQ--DKI----P-----QFGQQTPMKRAGQPAELAPVYVYLASQESSY--VTAEVHGVCGG 290 (294)
T ss_dssp -----TSCG--GGS----T-----TTTTTSTTSSCBCGGGGHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----CCCH--HHH----H-----HHHhcCCCCCCcCHHHHHHHHHHHhCccccC--CCCCEEEECCC
Confidence 0000 000 0 0011122345678899999999988765431 24889999887
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-13 Score=119.76 Aligned_cols=204 Identities=12% Similarity=0.055 Sum_probs=136.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... +.+.+.+ .....++.++.+|++++ +++..++
T Consensus 48 ~~la~~L~~~--G~~V~~~~r~~~~~---~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 102 (279)
T 3ctm_A 48 WAVAEAYAQA--GADVAIWYNSHPAD---EKAEHLQ--------------KTYGVHSKAYKCNISDP------KSVEETI 102 (279)
T ss_dssp HHHHHHHHHH--TCEEEEEESSSCCH---HHHHHHH--------------HHHCSCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHHH---HHHHHHH--------------HhcCCcceEEEeecCCH------HHHHHHH
Confidence 3689999999 99999999975432 2222111 11234788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc------c---hhHHHHHHHhHHH----HHHHHHHHHhcCCCccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRF------D---DYMQTYVFLNTRG----TRDMLNLSKQMIHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~------~---~~~~~~~~~Nv~g----t~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~ 140 (318)
+ .+|+|||+||.... . ..+...+++|+.| +..+++.+++. +..+||++||..++...
T Consensus 103 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~-- 179 (279)
T 3ctm_A 103 SQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIITSSISGKIVN-- 179 (279)
T ss_dssp HHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCCTTSCC---
T ss_pred HHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEECchHhccCC--
Confidence 4 48999999997533 2 2245688999999 56777777764 67899999997754320
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
...+. ..|+.||.+.|.+++.+.. .+ ++.+++||.+.++..
T Consensus 180 -----~~~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~ 224 (279)
T 3ctm_A 180 -----IPQLQ-----------------------------APYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDIT 224 (279)
T ss_dssp -------CCH-----------------------------HHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTT
T ss_pred -----CCCCc-----------------------------ccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccc
Confidence 00110 6899999999999988765 46 899999998865422
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. . .. ......+... . ....+++++|+|++++.++...... ..+.++++.++
T Consensus 225 ~-------~-~~-~~~~~~~~~~-------~--p~~~~~~~~dvA~~~~~l~s~~~~~--~tG~~i~vdgG 275 (279)
T 3ctm_A 225 D-------F-AS-KDMKAKWWQL-------T--PLGREGLTQELVGGYLYLASNASTF--TTGSDVVIDGG 275 (279)
T ss_dssp S-------S-CC-HHHHHHHHHH-------S--TTCSCBCGGGTHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred c-------c-cC-hHHHHHHHHh-------C--CccCCcCHHHHHHHHHHHhCccccC--ccCCEEEECCC
Confidence 1 1 11 1121111110 0 1124789999999999998764321 24789999887
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-13 Score=118.64 Aligned_cols=212 Identities=11% Similarity=0.066 Sum_probs=137.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+...... +.+.+.+ .....++.++.+|++++ +++..++
T Consensus 16 ~~ia~~l~~~--G~~V~~~~r~~~~~~~-~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 72 (258)
T 3a28_C 16 RGISEKLAAD--GFDIAVADLPQQEEQA-AETIKLI--------------EAADQKAVFVGLDVTDK------ANFDSAI 72 (258)
T ss_dssp HHHHHHHHHH--TCEEEEEECGGGHHHH-HHHHHHH--------------HTTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCcchHHH-HHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHH
Confidence 3688999999 9999999996432001 1111111 11234788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCC-ccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHL-QLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~-~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+. .+||++||..++...
T Consensus 73 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 148 (258)
T 3a28_C 73 DEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF---- 148 (258)
T ss_dssp HHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC----
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC----
Confidence 4 79999999997532 2345678999999999999887652 144 799999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
++ ...|+.||.+.+.+.+.+.. .|+++.+++||.+..+....
T Consensus 149 -----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 194 (258)
T 3a28_C 149 -----PI-----------------------------LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ 194 (258)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH
T ss_pred -----CC-----------------------------chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh
Confidence 01 16899999999998887654 58999999999775421000
Q ss_pred CCCcccCC---Cch--HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNI---NGP--TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+.... .++ ......+.. ......+.+.+|+|++++.++...... ..+..+++.++
T Consensus 195 ---~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~l~s~~~~~--~tG~~i~vdGG 254 (258)
T 3a28_C 195 ---IDAELSKINGKPIGENFKEYSS---------SIALGRPSVPEDVAGLVSFLASENSNY--VTGQVMLVDGG 254 (258)
T ss_dssp ---HHHHHHHHHCCCTTHHHHHHHT---------TCTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESSS
T ss_pred ---hhhhhccccCCchHHHHHHHHh---------cCCCCCccCHHHHHHHHHHHhCcccCC--CCCCEEEECCC
Confidence 00000 000 011111111 011124789999999999998765321 24788998877
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.4e-13 Score=117.69 Aligned_cols=206 Identities=9% Similarity=0.012 Sum_probs=140.5
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+.. ..+.+.+..+ .....++.++.+|++++ +++..+++
T Consensus 24 ~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~~~D~~~~------~~v~~~~~ 79 (266)
T 3oig_A 24 GIARSLHEA--GARLIFTYAGER---LEKSVHELAG-------------TLDRNDSIILPCDVTND------AEIETCFA 79 (266)
T ss_dssp HHHHHHHHT--TCEEEEEESSGG---GHHHHHHHHH-------------TSSSCCCEEEECCCSSS------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEecCchH---HHHHHHHHHH-------------hcCCCCceEEeCCCCCH------HHHHHHHH
Confidence 688999998 999999998632 2233333221 11123789999999987 56666554
Q ss_pred -------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhcC-CCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.+|++||+||.... ...+...+++|+.|+.++++++...- .-.+||++||..+....
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---- 155 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM---- 155 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC----
T ss_pred HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC----
Confidence 68999999997531 12345688999999999999998641 22489999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.||.+.+.+.+.+.. +|+++.+++||.|.......
T Consensus 156 ------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 201 (266)
T 3oig_A 156 ------P----------------------------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKG 201 (266)
T ss_dssp ------T----------------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTT
T ss_pred ------C----------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc
Confidence 1 016899999999999887765 58999999999886643221
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..........+.... ....+.+.+|+|++++.++...... ..+.++++.++
T Consensus 202 -------~~~~~~~~~~~~~~~---------~~~~~~~p~dva~~v~~l~s~~~~~--~tG~~i~vdGG 252 (266)
T 3oig_A 202 -------ISDFNSILKDIEERA---------PLRRTTTPEEVGDTAAFLFSDMSRG--ITGENLHVDSG 252 (266)
T ss_dssp -------CTTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -------ccchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCchhc--CcCCEEEECCC
Confidence 111122222222211 1124678999999999998765431 24889999887
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=6.8e-14 Score=121.70 Aligned_cols=205 Identities=11% Similarity=0.075 Sum_probs=137.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|.. ...+...++ .....++.++.+|+++. +++..+.
T Consensus 45 ~aia~~la~~--G~~V~~~~r~~---~~~~~~~~~---------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 98 (273)
T 3uf0_A 45 RAIAHGYARA--GAHVLAWGRTD---GVKEVADEI---------------ADGGGSAEAVVADLADL------EGAANVA 98 (273)
T ss_dssp HHHHHHHHHT--TCEEEEEESST---HHHHHHHHH---------------HTTTCEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCHH---HHHHHHHHH---------------HhcCCcEEEEEecCCCH------HHHHHHH
Confidence 3688999998 99999998742 122222211 22235789999999986 4555543
Q ss_pred c------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 81 E------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 99 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~------ 172 (273)
T 3uf0_A 99 EELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG------ 172 (273)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------
T ss_pred HHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC------
Confidence 3 79999999997532 2345678999999999999987431 255789999997765321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++....
T Consensus 173 ---~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-- 218 (273)
T 3uf0_A 173 ---RN-----------------------------VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAA-- 218 (273)
T ss_dssp ---SS-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH--
T ss_pred ---CC-----------------------------ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhh--
Confidence 01 17899999999999887764 58999999999886642110
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..........+... .....+..++|+|++++.++...... ..++++++.++
T Consensus 219 -----~~~~~~~~~~~~~~---------~p~~r~~~pedva~~v~~L~s~~a~~--itG~~i~vdGG 269 (273)
T 3uf0_A 219 -----LRADDERAAEITAR---------IPAGRWATPEDMVGPAVFLASDAASY--VHGQVLAVDGG 269 (273)
T ss_dssp -----HHTSHHHHHHHHHH---------STTSSCBCGGGGHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----cccCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCchhcC--CcCCEEEECcC
Confidence 00011112222211 11235778999999999988764431 24889999887
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=4.2e-14 Score=123.26 Aligned_cols=206 Identities=9% Similarity=0.019 Sum_probs=136.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 36 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 90 (277)
T 2rhc_B 36 LEIARRLGKE--GLRVFVCARGEE---GLRTTLKEL--------------REAGVEADGRTCDVRSV------PEIEALV 90 (277)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCceEEEECCCCCH------HHHHHHH
Confidence 3688999988 999999999532 111111111 11134688999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-----CCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-----IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 91 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--- 167 (277)
T 2rhc_B 91 AAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV--- 167 (277)
T ss_dssp HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC---
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC---
Confidence 4 68999999997432 1335678999999999999987652 135799999997664321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.+ ...|+.||.+.+.+.+.+.. .|+++++++||.+.++...
T Consensus 168 ------~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 212 (277)
T 2rhc_B 168 ------VH-----------------------------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA 212 (277)
T ss_dssp ------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH
T ss_pred ------CC-----------------------------CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh
Confidence 01 16899999999999887754 4799999999988653210
Q ss_pred CCCCcccCCCc---h------HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNING---P------TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... . ......+.. ......+++++|+|++++.++..+... ..+.+|++.++
T Consensus 213 -------~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~~~dvA~~v~~l~s~~~~~--~tG~~~~vdGG 273 (277)
T 2rhc_B 213 -------SVREHYSDIWEVSTEEAFDRITA---------RVPIGRYVQPSEVAEMVAYLIGPGAAA--VTAQALNVCGG 273 (277)
T ss_dssp -------HHHHHHHHHHTCCHHHHHHHHHH---------HSTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -------hhhhhcccccccchHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCchhcC--CCCcEEEECCC
Confidence 0000 0 001111111 111235899999999999988765321 24789999877
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=6.8e-14 Score=122.83 Aligned_cols=206 Identities=9% Similarity=-0.002 Sum_probs=140.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+.+.+.. .....++.++.+|++++ +++..++
T Consensus 61 ~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~~~--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 116 (291)
T 3ijr_A 61 RAVSIAFAKE--GANIAIAYLDEEG--DANETKQYV--------------EKEGVKCVLLPGDLSDE------QHCKDIV 116 (291)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHH--------------HTTTCCEEEEESCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCchH--HHHHHHHHH--------------HhcCCcEEEEECCCCCH------HHHHHHH
Confidence 3688999998 9999999996421 122222221 22235789999999986 5666655
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... ....+||++||..++....
T Consensus 117 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----- 191 (291)
T 3ijr_A 117 QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE----- 191 (291)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----
T ss_pred HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----
Confidence 4 78999999997421 2345678999999999999999863 1234899999977653210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
. ...|+.||.+.+.+.+.++. +|+++.+++||.|.++...
T Consensus 192 ----~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~--- 235 (291)
T 3ijr_A 192 ----T-----------------------------LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIP--- 235 (291)
T ss_dssp ----T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHH---
T ss_pred ----C-----------------------------ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccc---
Confidence 0 16899999999999887765 4899999999988663210
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ......+ ........+.+.+|+|++++.++...... ..+.++++.++
T Consensus 236 ----~~~~-~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L~s~~~~~--itG~~i~vdGG 286 (291)
T 3ijr_A 236 ----SSFD-EKKVSQF---------GSNVPMQRPGQPYELAPAYVYLASSDSSY--VTGQMIHVNGG 286 (291)
T ss_dssp ----HHSC-HHHHHHT---------TTTSTTSSCBCGGGTHHHHHHHHSGGGTT--CCSCEEEESSS
T ss_pred ----ccCC-HHHHHHH---------HccCCCCCCcCHHHHHHHHHHHhCCccCC--CcCCEEEECCC
Confidence 0000 1111111 12223346788999999999988765431 24889999887
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.9e-13 Score=117.26 Aligned_cols=202 Identities=11% Similarity=0.066 Sum_probs=128.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... . ..+.++.+|++++ +++..++
T Consensus 21 ~~ia~~l~~~--G~~V~~~~r~~~~~------------------------~---~~~~~~~~D~~d~------~~~~~~~ 65 (250)
T 2fwm_X 21 YATALAFVEA--GAKVTGFDQAFTQE------------------------Q---YPFATEVMDVADA------AQVAQVC 65 (250)
T ss_dssp HHHHHHHHHT--TCEEEEEESCCCSS------------------------C---CSSEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCchhhh------------------------c---CCceEEEcCCCCH------HHHHHHH
Confidence 3688999998 99999999964321 1 1277889999986 5677666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++. +. +..+||++||..++...
T Consensus 66 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~---- 140 (250)
T 2fwm_X 66 QRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVASDAAHTPR---- 140 (250)
T ss_dssp HHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCCCC----
Confidence 5 78999999997432 23456789999999999999883 32 56799999998764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
++ ...|+.||.+.+.+.+.+.. .|+++++++||.+.++....
T Consensus 141 -----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 186 (250)
T 2fwm_X 141 -----IG-----------------------------MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRT 186 (250)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred -----CC-----------------------------CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccc
Confidence 11 17899999999999887754 48999999999987753211
Q ss_pred CCCcccCCCchHHHHH-HHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLI-GAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ........ .+.. .... .........+.+.+|+|++++.++...... ..+..+++.++
T Consensus 187 ~-------~~~~~~~~~~~~~-~~~~-~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~--~tG~~i~vdGG 245 (250)
T 2fwm_X 187 L-------WVSDDAEEQRIRG-FGEQ-FKLGIPLGKIARPQEIANTILFLASDLASH--ITLQDIVVDGG 245 (250)
T ss_dssp --------------------------------------CHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred c-------ccChhHHHHHHhh-hhhc-ccccCCCCCCcCHHHHHHHHHHHhCccccC--CCCCEEEECCC
Confidence 0 00000000 0000 0000 000011124789999999999988765321 24788998877
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-13 Score=117.45 Aligned_cols=182 Identities=13% Similarity=0.080 Sum_probs=128.5
Q ss_pred ChhHHHHHhhCCCc-------EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCH
Q psy7539 1 KVLLEKILRTCENV-------KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISA 73 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~-------~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~ 73 (318)
++++++|+++ |+ +|+++.|+.. ..+.+.+.+ .....++.++.+|++++
T Consensus 16 ~~la~~l~~~--G~~~~~~~~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------ 70 (244)
T 2bd0_A 16 RAIALEFARA--ARHHPDFEPVLVLSSRTAA---DLEKISLEC--------------RAEGALTDTITADISDM------ 70 (244)
T ss_dssp HHHHHHHHHH--TTTCTTCCEEEEEEESCHH---HHHHHHHHH--------------HTTTCEEEEEECCTTSH------
T ss_pred HHHHHHHHHh--cCcccccceEEEEEeCCHH---HHHHHHHHH--------------HccCCeeeEEEecCCCH------
Confidence 3688999998 88 9999999531 112222111 11134788999999986
Q ss_pred HHHHHHhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEecccccc
Q psy7539 74 EDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHP 136 (318)
Q Consensus 74 ~~~~~~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~ 136 (318)
+++..+++ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..++.
T Consensus 71 ~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 150 (244)
T 2bd0_A 71 ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK 150 (244)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC
Confidence 56666654 69999999997532 2345678999999999999987531 2567999999987754
Q ss_pred CCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc
Q psy7539 137 KEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII 212 (318)
Q Consensus 137 ~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~ 212 (318)
.. .+. ..|+.||.+.|.+++.+.. .|++++++|||.++
T Consensus 151 ~~---------~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 192 (244)
T 2bd0_A 151 AF---------RHS-----------------------------SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVY 192 (244)
T ss_dssp CC---------TTC-----------------------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred CC---------CCC-----------------------------chhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCcc
Confidence 21 111 7899999999999866543 58999999999998
Q ss_pred cccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 213 PIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 213 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
++..... .. . . ...+++++|+|++++.++..+.
T Consensus 193 t~~~~~~-------~~------------------~-~-~~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 193 TPMWGKV-------DD------------------E-M-QALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp STTTCCC-------CS------------------T-T-GGGSBCHHHHHHHHHHHHTSCT
T ss_pred chhhhhc-------cc------------------c-c-cccCCCHHHHHHHHHHHHhCCc
Confidence 7532110 00 0 0 2368999999999999997644
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-13 Score=119.71 Aligned_cols=205 Identities=12% Similarity=0.057 Sum_probs=137.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ...+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 43 ~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~v~~~~ 98 (271)
T 4iin_A 43 AEIAKTLASM--GLKVWINYRSNA--EVADALKNEL--------------EEKGYKAAVIKFDAASE------SDFIEAI 98 (271)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCCH--HHHHHHHHHH--------------HhcCCceEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999999532 1222222211 22235789999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..++|++||..+....
T Consensus 99 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 173 (271)
T 4iin_A 99 QTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN----- 173 (271)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----
T ss_pred HHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC-----
Confidence 4 79999999997532 1345678999999999988877532 245789999997654221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.+.. .++++.+++||.+..+.....
T Consensus 174 ----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 220 (271)
T 4iin_A 174 ----MG-----------------------------QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL 220 (271)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----
T ss_pred ----CC-----------------------------chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh
Confidence 01 17899999999999887764 589999999998855321110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ... ............+.+.+|+|++++.++...... ..++++++.++
T Consensus 221 -------~--~~~---------~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~--itG~~i~vdGG 268 (271)
T 4iin_A 221 -------K--DEL---------KADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSY--ITGETLKVNGG 268 (271)
T ss_dssp -------------------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -------c--HHH---------HHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCC--CcCCEEEeCCC
Confidence 0 000 001111223346889999999999998765431 24889999887
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.56 E-value=7.9e-14 Score=121.17 Aligned_cols=207 Identities=13% Similarity=0.070 Sum_probs=132.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.+.. .+..+.+.+.+ .....++.++.+|+++. +++..++
T Consensus 40 ~a~a~~l~~~--G~~V~~~~~~~--~~~~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~v~~~~ 95 (272)
T 4e3z_A 40 AAVCRLAARQ--GWRVGVNYAAN--REAADAVVAAI--------------TESGGEAVAIPGDVGNA------ADIAAMF 95 (272)
T ss_dssp HHHHHHHHHT--TCEEEEEESSC--HHHHHHHHHHH--------------HHTTCEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCC--hhHHHHHHHHH--------------HhcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999998 99987774432 11122222111 22245789999999986 5666655
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc------CCCccEEEEeccccccCCc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM------IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~------~~~~~~v~~SS~~~~~~~~ 139 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..+.....
T Consensus 96 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 175 (272)
T 4e3z_A 96 SAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA 175 (272)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT
T ss_pred HHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC
Confidence 4 78999999997532 2345678999999999999888653 1245799999976643210
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
.. ...|+.||.+.+.+.+.+.. .|+++.+++||.|.++.
T Consensus 176 --------~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 218 (272)
T 4e3z_A 176 --------TQ-----------------------------YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL 218 (272)
T ss_dssp --------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred --------CC-----------------------------cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCc
Confidence 00 15799999999998877765 48999999999887643
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ......... ........+.+++|+|++++.++...... ..+++|++.++
T Consensus 219 ~~~~--------~~~~~~~~~---------~~~~~~~~~~~~edvA~~i~~l~s~~~~~--~tG~~i~vdgG 271 (272)
T 4e3z_A 219 HASG--------GLPDRAREM---------APSVPMQRAGMPEEVADAILYLLSPSASY--VTGSILNVSGG 271 (272)
T ss_dssp --------------------------------CCTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred cccc--------CChHHHHHH---------hhcCCcCCCcCHHHHHHHHHHHhCCcccc--ccCCEEeecCC
Confidence 2110 000011111 11122334678999999999998765431 24789999876
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.56 E-value=6.6e-14 Score=120.01 Aligned_cols=201 Identities=10% Similarity=0.040 Sum_probs=137.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+. .....+..++.+|++++ +++..++
T Consensus 23 ~a~a~~l~~~--G~~V~~~~r~~~---~~~~~~-----------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 74 (248)
T 3op4_A 23 KAIAELLAER--GAKVIGTATSES---GAQAIS-----------------DYLGDNGKGMALNVTNP------ESIEAVL 74 (248)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHH---HHHHHH-----------------HHHGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHH-----------------HHhcccceEEEEeCCCH------HHHHHHH
Confidence 3688999998 999999998532 112221 11234578899999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 75 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----- 149 (248)
T 3op4_A 75 KAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN----- 149 (248)
T ss_dssp HHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----
Confidence 5 79999999997532 2345678999999999999987541 245689999997654321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.+..+...
T Consensus 150 ----~~-----------------------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~-- 194 (248)
T 3op4_A 150 ----AG-----------------------------QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK-- 194 (248)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTT--
T ss_pred ----CC-----------------------------ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhh--
Confidence 01 17899999999888877654 5899999999988553221
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . .......... .....+.+.+|+|++++.++...... ..++++++.++
T Consensus 195 -----~~-~-~~~~~~~~~~---------~p~~r~~~p~dva~~v~~L~s~~~~~--itG~~i~vdgG 244 (248)
T 3op4_A 195 -----AL-N-DEQRTATLAQ---------VPAGRLGDPREIASAVAFLASPEAAY--ITGETLHVNGG 244 (248)
T ss_dssp -----TS-C-HHHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hc-C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCCccCC--ccCcEEEECCC
Confidence 11 1 1111111111 12235789999999999888754431 24889999887
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.2e-13 Score=118.72 Aligned_cols=207 Identities=9% Similarity=0.073 Sum_probs=137.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++.+.. .+...++.++.+|++++ +++..++
T Consensus 41 ~aia~~l~~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 92 (277)
T 4dqx_A 41 RATAELFAKN--GAYVVVADVNE------DAAVRVA--------------NEIGSKAFGVRVDVSSA------KDAESMV 92 (277)
T ss_dssp HHHHHHHHHT--TCEEEEEESSH------HHHHHHH--------------HHHCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHH--------------HHhCCceEEEEecCCCH------HHHHHHH
Confidence 3688999998 99999999852 1222211 12235788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 93 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 167 (277)
T 4dqx_A 93 EKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI----- 167 (277)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC-----
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC-----
Confidence 4 78999999997422 2345678899999999988887532 244699999997765321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++.....
T Consensus 168 ----~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 214 (277)
T 4dqx_A 168 ----AD-----------------------------RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKI 214 (277)
T ss_dssp ----TT-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred ----CC-----------------------------ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhh
Confidence 00 17899999999999887764 589999999998754210000
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
......+......+. .......+.+++|+|++++.++...... ..+.++++.++
T Consensus 215 ---~~~~~~~~~~~~~~~---------~~~~~~r~~~pedvA~~v~~L~s~~~~~--itG~~i~vdGG 268 (277)
T 4dqx_A 215 ---FAEAKDPAKLRSDFN---------ARAVMDRMGTAEEIAEAMLFLASDRSRF--ATGSILTVDGG 268 (277)
T ss_dssp ---HHTCSCHHHHHHHHH---------TTSTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESSS
T ss_pred ---cccccchhHHHHHHH---------hcCcccCCcCHHHHHHHHHHHhCCccCC--CcCCEEEECCc
Confidence 000000111111111 1222345788999999999988765431 24889999988
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.2e-13 Score=118.38 Aligned_cols=210 Identities=11% Similarity=0.051 Sum_probs=135.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++.+..+ .+ .....++.++.+|++++ +++..++
T Consensus 35 ~aia~~l~~~--G~~V~~~~r~~~------~~~~~~~-----~~------~~~~~~~~~~~~D~~~~------~~~~~~~ 89 (273)
T 1ae1_A 35 YAIVEELAGL--GARVYTCSRNEK------ELDECLE-----IW------REKGLNVEGSVCDLLSR------TERDKLM 89 (273)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHHH-----HH------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HH------HhcCCceEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999999531 2221110 00 11234788999999986 5666655
Q ss_pred --------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 --------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 --------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---- 165 (273)
T 1ae1_A 90 QTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL---- 165 (273)
T ss_dssp HHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC----
Confidence 478999999997532 2345678899999999999988421 245799999998775421
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
++ ...|+.||.+.+.+.+.+.. .|+++++++||.+.++....
T Consensus 166 -----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 211 (273)
T 1ae1_A 166 -----PS-----------------------------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVET 211 (273)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred -----CC-----------------------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhh
Confidence 01 17899999999999887754 48999999999997753221
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ...........+... . ....+.+.+|+|++++.++...... ..+.++++.++
T Consensus 212 ~~~---~~~~~~~~~~~~~~~-------~--p~~r~~~p~dvA~~v~~l~s~~~~~--~tG~~i~vdGG 266 (273)
T 1ae1_A 212 AIK---KNPHQKEEIDNFIVK-------T--PMGRAGKPQEVSALIAFLCFPAASY--ITGQIIWADGG 266 (273)
T ss_dssp ----------CHHHHHHHHHH-------S--TTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred hhh---cccCcHHHHHHHHhc-------C--CCCCCcCHHHHHHHHHHHhCccccC--cCCCEEEECCC
Confidence 000 000001111111111 0 1124789999999999988654321 24789999877
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.56 E-value=2e-13 Score=117.74 Aligned_cols=216 Identities=15% Similarity=0.065 Sum_probs=134.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcch-hccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESA-IFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .. ...++.++.+|++++ +++..+
T Consensus 21 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~~~~D~~~~------~~v~~~ 76 (260)
T 2z1n_A 21 FASALELARN--GARLLLFSRNRE---KLEAAASRIA-------------SLVSGAQVDIVAGDIREP------GDIDRL 76 (260)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH-------------HHSTTCCEEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHH-------------hcCCCCeEEEEEccCCCH------HHHHHH
Confidence 3688999998 999999999531 1111111100 00 012788999999986 577766
Q ss_pred hc------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 80 SE------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 80 ~~------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
++ ++|+|||+||.... ...++..+++|+.|+.++.+++... .+..+||++||..++...
T Consensus 77 ~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 151 (260)
T 2z1n_A 77 FEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW----- 151 (260)
T ss_dssp HHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----
T ss_pred HHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC-----
Confidence 65 59999999996422 2345678999999997776665421 256899999998765321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.+.. .|+++++++||.+.++.....
T Consensus 152 ----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 198 (260)
T 2z1n_A 152 ----QD-----------------------------LALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSL 198 (260)
T ss_dssp ----TT-----------------------------BHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--
T ss_pred ----CC-----------------------------CchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhh
Confidence 00 16899999999998877654 489999999999987542200
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .............. ..+ ........+.+.+|+|++++.++...... ..+..+++.++
T Consensus 199 ~~---~~~~~~~~~~~~~~---~~~-~~~~p~~r~~~~~dva~~v~~l~s~~~~~--~tG~~i~vdGG 257 (260)
T 2z1n_A 199 AE---ERARRSGITVEEAL---KSM-ASRIPMGRVGKPEELASVVAFLASEKASF--ITGAVIPVDGG 257 (260)
T ss_dssp ----------------------------CCTTSSCCCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred hh---hhhcccCCcHHHHH---HHH-HhcCCCCCccCHHHHHHHHHHHhCccccC--CCCCEEEeCCC
Confidence 00 00000000000000 000 01111234789999999999998764321 24788988876
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-13 Score=118.83 Aligned_cols=206 Identities=12% Similarity=0.034 Sum_probs=138.3
Q ss_pred ChhHHHHHhhCCCcEEEEE-EccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYIL-LRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l-~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++++++|+++ |++|+++ .|+.. ..+.+.+.+ .....++.++.+|++++ +++..+
T Consensus 18 ~aia~~l~~~--G~~vv~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~ 72 (258)
T 3oid_A 18 KAAAIRLAEN--GYNIVINYARSKK---AALETAEEI--------------EKLGVKVLVVKANVGQP------AKIKEM 72 (258)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCHH---HHHHHHHHH--------------HTTTCCEEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCCHH---HHHHHHHHH--------------HhcCCcEEEEEcCCCCH------HHHHHH
Confidence 3688999998 9998886 56421 112222111 12235789999999986 566665
Q ss_pred hc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 80 SE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
++ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 73 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---- 148 (258)
T 3oid_A 73 FQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL---- 148 (258)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC----
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC----
Confidence 54 67999999996321 2335568999999999999887432 245699999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.+.++...
T Consensus 149 -----~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~- 193 (258)
T 3oid_A 149 -----EN-----------------------------YTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALK- 193 (258)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGG-
T ss_pred -----CC-----------------------------cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhh-
Confidence 11 17899999999999987765 4899999999988664321
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
............... .....+.+++|+|++++.++...... ..+.++++.++
T Consensus 194 ------~~~~~~~~~~~~~~~---------~p~~r~~~~~dva~~v~~L~s~~~~~--itG~~i~vdGG 245 (258)
T 3oid_A 194 ------HFPNREDLLEDARQN---------TPAGRMVEIKDMVDTVEFLVSSKADM--IRGQTIIVDGG 245 (258)
T ss_dssp ------GCTTHHHHHHHHHHH---------CTTSSCBCHHHHHHHHHHHTSSTTTT--CCSCEEEESTT
T ss_pred ------hcccCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccCC--ccCCEEEECCC
Confidence 111112222222221 11235789999999999988764421 24889999888
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.1e-13 Score=121.22 Aligned_cols=221 Identities=12% Similarity=0.034 Sum_probs=141.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCC------HHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKN------SRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAE 74 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~------~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~ 74 (318)
+++++.|+++ |++|+++.|...... ..+++.+... .+ .....++.++.+|++++ +
T Consensus 60 ~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~Dv~d~------~ 120 (317)
T 3oec_A 60 RTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVR-----LV------EEQGRRIIARQADVRDL------A 120 (317)
T ss_dssp HHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHH-----HH------HHTTCCEEEEECCTTCH------H
T ss_pred HHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHH-----HH------HhcCCeEEEEECCCCCH------H
Confidence 3688999998 999999988633211 1233332211 01 22245789999999986 5
Q ss_pred HHHHHhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEecccccc
Q psy7539 75 DRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHP 136 (318)
Q Consensus 75 ~~~~~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~ 136 (318)
++..+++ ++|++||+||.... ...++..+++|+.|+.++++++... +...+||++||..++.
T Consensus 121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~ 200 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR 200 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence 6666654 78999999997532 2345678999999999999887542 1235799999977643
Q ss_pred CCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc
Q psy7539 137 KEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII 212 (318)
Q Consensus 137 ~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~ 212 (318)
... . ...|+.||.+.+.+.+.++. +|+++.+++||.|.
T Consensus 201 ~~~---------~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 242 (317)
T 3oec_A 201 GAP---------G-----------------------------QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVN 242 (317)
T ss_dssp CCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred CCC---------C-----------------------------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccc
Confidence 210 0 16899999999999887765 58999999999886
Q ss_pred cccCCCCC---CcccCCCch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 213 PIWKDPLP---GWTDNINGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 213 G~~~~~~~---g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
++...... .+...+..+ ......... .....+..|++++|+|++++.++...... ..+.++++.++
T Consensus 243 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~p~~~~~pedvA~av~fL~s~~a~~--itG~~i~vdGG 312 (317)
T 3oec_A 243 TEMALNEKLLKMFLPHLENPTREDAAELFS-------QLTLLPIPWVEPEDVSNAVAWLASDEARY--IHGAAIPVDGG 312 (317)
T ss_dssp SHHHHCHHHHHHHCTTCSSCCHHHHHHHHT-------TTCSSSSSSBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred CccccchhhhhhhhhhccccchhHHHHHHh-------hhccCCCCCCCHHHHHHHHHHHcCCcccC--CCCCEEEECcc
Confidence 64211000 000000000 000001000 11122267899999999999988654431 24889999887
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=3.4e-13 Score=117.67 Aligned_cols=203 Identities=13% Similarity=0.066 Sum_probs=139.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+. ..+.++++. ....++.++.+|++++ +++..+++
T Consensus 43 ~ia~~l~~~--G~~V~~~~r~~----~~~~~~~l~---------------~~~~~~~~~~~Dl~~~------~~v~~~~~ 95 (280)
T 3nrc_A 43 GIAKAMHRE--GAELAFTYVGQ----FKDRVEKLC---------------AEFNPAAVLPCDVISD------QEIKDLFV 95 (280)
T ss_dssp HHHHHHHHT--TCEEEEEECTT----CHHHHHHHH---------------GGGCCSEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHc--CCEEEEeeCch----HHHHHHHHH---------------HhcCCceEEEeecCCH------HHHHHHHH
Confidence 688999998 99999999975 223333331 1224688999999986 56666554
Q ss_pred -------CccEEEEcccccCc------------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcc
Q psy7539 82 -------TIHIVYHIAATVRF------------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~ 140 (318)
++|+|||+||.... ...+...+++|+.++.++++++... .+..+||++||..+....
T Consensus 96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-- 173 (280)
T 3nrc_A 96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM-- 173 (280)
T ss_dssp HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC--
T ss_pred HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC--
Confidence 57999999997532 2334568999999999999988753 134689999997764321
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
.+ ...|+.||.+.+.+.+.+.. +|+++.+++||.|.....
T Consensus 174 -------~~-----------------------------~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 217 (280)
T 3nrc_A 174 -------PS-----------------------------YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAA 217 (280)
T ss_dssp -------TT-----------------------------THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGG
T ss_pred -------CC-----------------------------chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhh
Confidence 01 17899999999999887654 589999999998876432
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ............... .....+...+|+|++++.++...... ..+.++++.++
T Consensus 218 ~-------~~~~~~~~~~~~~~~---------~p~~~~~~pedvA~~v~~l~s~~~~~--~tG~~i~vdgG 270 (280)
T 3nrc_A 218 S-------GISNFKKMLDYNAMV---------SPLKKNVDIMEVGNTVAFLCSDMATG--ITGEVVHVDAG 270 (280)
T ss_dssp G-------GCTTHHHHHHHHHHH---------STTCSCCCHHHHHHHHHHTTSGGGTT--CCSCEEEESTT
T ss_pred h-------cCcchHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCcccCC--cCCcEEEECCC
Confidence 1 111112222222211 01234678999999999998765421 24889999887
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.6e-13 Score=120.12 Aligned_cols=204 Identities=12% Similarity=0.083 Sum_probs=134.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 58 ~~la~~L~~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~Dl~d~------~~v~~~~ 112 (285)
T 2c07_A 58 REIAKMLAKS--VSHVICISRTQK---SCDSVVDEI--------------KSFGYESSGYAGDVSKK------EEISEVI 112 (285)
T ss_dssp HHHHHHHTTT--SSEEEEEESSHH---HHHHHHHHH--------------HTTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHc--CCEEEEEcCCHH---HHHHHHHHH--------------HhcCCceeEEECCCCCH------HHHHHHH
Confidence 3688899988 899999877421 111111111 11234788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..++...
T Consensus 113 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----- 187 (285)
T 2c07_A 113 NKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN----- 187 (285)
T ss_dssp HHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----
T ss_pred HHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----
Confidence 3 68999999997532 2345678999999988887776531 256799999997654321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.|.+.+.+.. .|++++++|||.+.++...
T Consensus 188 ----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-- 232 (285)
T 2c07_A 188 ----VG-----------------------------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD-- 232 (285)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------
T ss_pred ----CC-----------------------------CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchh--
Confidence 01 16899999999988887654 4899999999988764321
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . ..+........ ....+++++|+|++++.++...... ..+..|++.++
T Consensus 233 -----~~-~-~~~~~~~~~~~---------~~~~~~~~~dvA~~~~~l~~~~~~~--~~G~~i~v~gG 282 (285)
T 2c07_A 233 -----KI-S-EQIKKNIISNI---------PAGRMGTPEEVANLACFLSSDKSGY--INGRVFVIDGG 282 (285)
T ss_dssp ------C-C-HHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hc-C-HHHHHHHHhhC---------CCCCCCCHHHHHHHHHHHhCCCcCC--CCCCEEEeCCC
Confidence 11 1 11222222110 1124899999999999988764421 14788999876
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=5.9e-14 Score=119.98 Aligned_cols=192 Identities=11% Similarity=0.074 Sum_probs=126.5
Q ss_pred ChhHHHHHhhCCC--cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH
Q psy7539 1 KVLLEKILRTCEN--VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~--~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~ 78 (318)
++++++|+++ | ++|+++.|+.... +.+. .....++.++.+|++++ +++..
T Consensus 17 ~~la~~l~~~--g~~~~V~~~~r~~~~~---~~l~-----------------~~~~~~~~~~~~D~~~~------~~~~~ 68 (250)
T 1yo6_A 17 LGLVQQLVKD--KNIRHIIATARDVEKA---TELK-----------------SIKDSRVHVLPLTVTCD------KSLDT 68 (250)
T ss_dssp HHHHHHHHTC--TTCCEEEEEESSGGGC---HHHH-----------------TCCCTTEEEEECCTTCH------HHHHH
T ss_pred HHHHHHHHhc--CCCcEEEEEecCHHHH---HHHH-----------------hccCCceEEEEeecCCH------HHHHH
Confidence 3688999988 7 8999999964332 1111 11134789999999986 56666
Q ss_pred Hhc---------CccEEEEcccccC-c-------chhHHHHHHHhHHHHHHHHHHHHhc---C------C-----CccEE
Q psy7539 79 LSE---------TIHIVYHIAATVR-F-------DDYMQTYVFLNTRGTRDMLNLSKQM---I------H-----LQLFV 127 (318)
Q Consensus 79 ~~~---------~~d~Vih~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~------~-----~~~~v 127 (318)
+++ ++|+|||+||... . ...+...+++|+.|+.++++++... . + ..+||
T Consensus 69 ~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv 148 (250)
T 1yo6_A 69 FVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVI 148 (250)
T ss_dssp HHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEE
T ss_pred HHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEE
Confidence 665 8999999999754 1 2345678999999999999887642 1 2 57899
Q ss_pred EEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcE
Q psy7539 128 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 203 (318)
Q Consensus 128 ~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~ 203 (318)
++||..++.... .+..+..+. ..|+.||.+.+.+++.+.. .|+++
T Consensus 149 ~isS~~~~~~~~--~~~~~~~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v 197 (250)
T 1yo6_A 149 TISSGLGSITDN--TSGSAQFPV-----------------------------LAYRMSKAAINMFGRTLAVDLKDDNVLV 197 (250)
T ss_dssp EECCGGGCSTTC--CSTTSSSCB-----------------------------HHHHHHHHHHHHHHHHHHHHTGGGTCEE
T ss_pred EeccCccccCCc--ccccccCCc-----------------------------cHHHHHHHHHHHHHHHHHHHhccCCeEE
Confidence 999977654311 011111111 6899999999999988765 38999
Q ss_pred EEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEE
Q psy7539 204 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVIN 283 (318)
Q Consensus 204 ~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~n 283 (318)
.+++||.+.++. .. ...+++.+|+|+.++.++...... ..+..+.
T Consensus 198 ~~v~Pg~v~t~~-----------~~----------------------~~~~~~~~~~a~~~~~~~~~~~~~--~~G~~~~ 242 (250)
T 1yo6_A 198 VNFCPGWVQTNL-----------GG----------------------KNAALTVEQSTAELISSFNKLDNS--HNGRFFM 242 (250)
T ss_dssp EEEECCCC----------------------------------------------HHHHHHHHHHHTTCCGG--GTTCEEE
T ss_pred EEEcCCceecCC-----------CC----------------------CCCCCCHHHHHHHHHHHHhccccc--CCCeEEE
Confidence 999999774421 00 014678999999999999765421 1255555
Q ss_pred eeC
Q psy7539 284 LTA 286 (318)
Q Consensus 284 i~~ 286 (318)
+.+
T Consensus 243 ~~g 245 (250)
T 1yo6_A 243 RNL 245 (250)
T ss_dssp TTE
T ss_pred ECC
Confidence 543
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.6e-13 Score=117.54 Aligned_cols=207 Identities=10% Similarity=0.048 Sum_probs=137.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .....++.++.+|++++ +++..++
T Consensus 34 ~aia~~l~~~--G~~V~~~~r~~~---~~~~~~~~l~-------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 89 (266)
T 4egf_A 34 ADIARAFAAA--GARLVLSGRDVS---ELDAARRALG-------------EQFGTDVHTVAIDLAEP------DAPAELA 89 (266)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH-------------HHHCCCEEEEECCTTST------THHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHH-------------HhcCCcEEEEEecCCCH------HHHHHHH
Confidence 3688999998 999999999522 1111111110 11245799999999987 3566555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... +...+||++||..++...
T Consensus 90 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 165 (266)
T 4egf_A 90 RRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL---- 165 (266)
T ss_dssp HHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC----
Confidence 4 79999999997532 2335678999999999999887542 123589999998765321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.. ...|+.||.+.+.+.+.++. +|+++..++||.|..+...
T Consensus 166 -----~~-----------------------------~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~- 210 (266)
T 4egf_A 166 -----PD-----------------------------HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQ- 210 (266)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHH-
T ss_pred -----CC-----------------------------ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhh-
Confidence 00 17899999999998887765 5899999999988653211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...........+... .....+...+|+|++++.++...... ..+.++++.++
T Consensus 211 ------~~~~~~~~~~~~~~~---------~p~~r~~~p~dva~~v~~L~s~~~~~--itG~~i~vdGG 262 (266)
T 4egf_A 211 ------RVWGDEAKSAPMIAR---------IPLGRFAVPHEVSDAVVWLASDAASM--INGVDIPVDGG 262 (266)
T ss_dssp ------HHTCSHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------hhccChHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchhcC--ccCcEEEECCC
Confidence 000111112222221 12235678999999999988764431 24889999887
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.55 E-value=1e-13 Score=119.65 Aligned_cols=195 Identities=12% Similarity=0.062 Sum_probs=131.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+.+. ..++.++.+|++++ +++..++
T Consensus 41 ~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~--------------------~~~~~~~~~Dv~~~------~~v~~~~ 90 (260)
T 3gem_A 41 LHCALRLLEH--GHRVIISYRTEHA--SVTELR--------------------QAGAVALYGDFSCE------TGIMAFI 90 (260)
T ss_dssp HHHHHHHHHT--TCCEEEEESSCCH--HHHHHH--------------------HHTCEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCChHH--HHHHHH--------------------hcCCeEEECCCCCH------HHHHHHH
Confidence 3688999998 9999999996532 111111 12478899999986 5666655
Q ss_pred c-------CccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..++...
T Consensus 91 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------ 164 (260)
T 3gem_A 91 DLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS------ 164 (260)
T ss_dssp HHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC------
T ss_pred HHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC------
Confidence 4 68999999997422 1234568999999999999887542 245689999997764321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
.+ ...|+.||.+.+.+.+.++. .++++.+++||.+.++...
T Consensus 165 ---~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~---- 208 (260)
T 3gem_A 165 ---SK-----------------------------HIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKD---- 208 (260)
T ss_dssp ---SS-----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------
T ss_pred ---CC-----------------------------cHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCC----
Confidence 01 17899999999999988765 3699999999988653211
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.......... .....-+..++|+|++++.++..... .+.++++.++
T Consensus 209 -------~~~~~~~~~~---------~~p~~r~~~~edva~~v~~L~~~~~i----tG~~i~vdGG 254 (260)
T 3gem_A 209 -------DAAYRANALA---------KSALGIEPGAEVIYQSLRYLLDSTYV----TGTTLTVNGG 254 (260)
T ss_dssp ---------------------------CCSCCCCCTHHHHHHHHHHHHCSSC----CSCEEEESTT
T ss_pred -------CHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhhCCCC----CCCEEEECCC
Confidence 0001111111 11112355689999999999854433 4889999888
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.2e-13 Score=116.33 Aligned_cols=207 Identities=11% Similarity=0.011 Sum_probs=137.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 20 ~aia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 74 (257)
T 3imf_A 20 KGMATRFAKE--GARVVITGRTKE---KLEEAKLEI--------------EQFPGQILTVQMDVRNT------DDIQKMI 74 (257)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------CCSTTCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHH
Confidence 3688999998 999999999532 122222111 22235789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... ....+||++||..+....
T Consensus 75 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 150 (257)
T 3imf_A 75 EQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG---- 150 (257)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC----
Confidence 4 78999999996421 2345678999999999999988321 245789999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecccccccccCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G~~~~ 217 (318)
.. ...|+.||.+.+.+.+.++. +|+++.+++||.|.++...
T Consensus 151 -----~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~ 196 (257)
T 3imf_A 151 -----PG-----------------------------VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGA 196 (257)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC
T ss_pred -----CC-----------------------------cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcch
Confidence 00 16899999999988876653 4899999999988764321
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ......+...... ......+...+|+|++++.++...... ..+.++++.++
T Consensus 197 ~~------~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~~--itG~~i~vdGG 249 (257)
T 3imf_A 197 DK------LWISEEMAKRTIQ---------SVPLGRLGTPEEIAGLAYYLCSDEAAY--INGTCMTMDGG 249 (257)
T ss_dssp -------------CCSHHHHT---------TSTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred hh------cccCHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCchhcC--ccCCEEEECCC
Confidence 10 0000000011111 112235789999999999988765431 24889999888
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-13 Score=121.73 Aligned_cols=203 Identities=16% Similarity=0.097 Sum_probs=122.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++..|+.. ..+.+.+.+. . .....++.++.+|++++ +++..++
T Consensus 22 ~~la~~l~~~--G~~Vv~~~r~~~---~~~~~~~~l~--------~----~~~~~~~~~~~~Dl~~~------~~v~~~~ 78 (319)
T 3ioy_A 22 IGLVRQLLNQ--GCKVAIADIRQD---SIDKALATLE--------A----EGSGPEVMGVQLDVASR------EGFKMAA 78 (319)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH--------H----HTCGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHHH--------h----cCCCCeEEEEECCCCCH------HHHHHHH
Confidence 3689999998 999999999632 1122221111 0 11123789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcC---------CCccEEEEeccccccC
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMI---------HLQLFVYVSTAYCHPK 137 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---------~~~~~v~~SS~~~~~~ 137 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++...- +..+||++||..+...
T Consensus 79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~ 158 (319)
T 3ioy_A 79 DEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA 158 (319)
T ss_dssp HHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC
T ss_pred HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC
Confidence 4 67999999997421 23456789999999999999886531 2346999999876542
Q ss_pred CcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHh----hhcCCcEEEeccccccc
Q psy7539 138 EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEY----MEAGMPCMILRPSIIIP 213 (318)
Q Consensus 138 ~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~----~~~~~~~~ilR~~~v~G 213 (318)
. | ....|+.||.+.+.+.+.+ ...|+.+++++||.|.+
T Consensus 159 ~----------~----------------------------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T 200 (319)
T 3ioy_A 159 A----------G----------------------------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKS 200 (319)
T ss_dssp C----------S----------------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-
T ss_pred C----------C----------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEcc
Confidence 1 0 0168999999666555544 33689999999999876
Q ss_pred ccCCCCCCcccCCCchHHHHHHHhcCceeeEecC-CCcccCcchHHHHHHHHHHHhhhc
Q psy7539 214 IWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCD-YSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
+...... ..+ ..+.............. .......++++|+|++++.+++++
T Consensus 201 ~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~ 252 (319)
T 3ioy_A 201 YIYASDD------IRP-DALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKAN 252 (319)
T ss_dssp -----------------------------------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred Ccccccc------cCc-hhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence 4322110 000 00000000000000001 111122389999999999999874
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=5e-13 Score=115.94 Aligned_cols=203 Identities=12% Similarity=0.088 Sum_probs=136.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|... ...+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 42 ~aia~~la~~--G~~V~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~D~~d~------~~v~~~~ 97 (269)
T 4dmm_A 42 RAIALELAAA--GAKVAVNYASSA--GAADEVVAAI--------------AAAGGEAFAVKADVSQE------SEVEALF 97 (269)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHH--------------HHTTCCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCCh--HHHHHHHHHH--------------HhcCCcEEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999988432 1122222111 22235788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 98 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 172 (269)
T 4dmm_A 98 AAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN----- 172 (269)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----
Confidence 4 78999999997532 2345678999999999999887431 245689999997654321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.. ...|+.||.+.+.+.+.++. +|+++.+++||.|.++..
T Consensus 173 ----~~-----------------------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~--- 216 (269)
T 4dmm_A 173 ----PG-----------------------------QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMT--- 216 (269)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCS---
T ss_pred ----CC-----------------------------chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccc---
Confidence 00 17899999998888877654 589999999998865321
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ........ ......+...+|+|++++.++..+... ...++++++.++
T Consensus 217 --------~~-~~~~~~~~---------~~p~~r~~~~~dvA~~v~~l~s~~~~~-~itG~~i~vdGG 265 (269)
T 4dmm_A 217 --------SE-LAAEKLLE---------VIPLGRYGEAAEVAGVVRFLAADPAAA-YITGQVINIDGG 265 (269)
T ss_dssp --------CH-HHHHHHGG---------GCTTSSCBCHHHHHHHHHHHHHCGGGG-GCCSCEEEESTT
T ss_pred --------cc-ccHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCCcccC-CCcCCEEEECCC
Confidence 11 00111111 111235788999999999998763210 014889999887
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.2e-13 Score=117.60 Aligned_cols=215 Identities=11% Similarity=0.034 Sum_probs=135.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+.+.+.+. .....++.++.+|++++ +++..++
T Consensus 18 ~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~-------------~~~~~~~~~~~~D~~~~------~~v~~~~ 74 (260)
T 1x1t_A 18 LGIATALAAQ--GADIVLNGFGDAA--EIEKVRAGLA-------------AQHGVKVLYDGADLSKG------EAVRGLV 74 (260)
T ss_dssp HHHHHHHHHT--TCEEEEECCSCHH--HHHHHHHHHH-------------HHHTSCEEEECCCTTSH------HHHHHHH
T ss_pred HHHHHHHHHc--CCEEEEEeCCcch--HHHHHHHHHH-------------hccCCcEEEEECCCCCH------HHHHHHH
Confidence 3688999998 9999999986321 0122211110 11134788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 75 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 149 (260)
T 1x1t_A 75 DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS----- 149 (260)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-----
Confidence 4 79999999997431 2345678999999999998887531 256799999998764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.+.. .|+++++++||.+.++.....
T Consensus 150 ----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 196 (260)
T 1x1t_A 150 ----AN-----------------------------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ 196 (260)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred ----CC-----------------------------CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh
Confidence 01 17899999999999887654 489999999998876432110
Q ss_pred CC-cccCCCc--hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PG-WTDNING--PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. +... .+ .......+. ........+.+.+|+|++++.++...... ..+.+|++.++
T Consensus 197 ~~~~~~~-~~~~~~~~~~~~~--------~~~~p~~~~~~p~dva~~~~~l~s~~~~~--~tG~~~~vdgG 256 (260)
T 1x1t_A 197 ISALAEK-NGVDQETAARELL--------SEKQPSLQFVTPEQLGGTAVFLASDAAAQ--ITGTTVSVDGG 256 (260)
T ss_dssp -------------------CH--------HHHCTTCCCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred hhhhccc-cCCchHHHHHHHh--------hccCCCCCCcCHHHHHHHHHHHhChhhcC--CCCCEEEECCC
Confidence 00 0000 00 000000000 00011235889999999999988754321 24789998876
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=8.1e-13 Score=115.61 Aligned_cols=220 Identities=11% Similarity=0.049 Sum_probs=140.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC----------CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCC
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK----------NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLG 70 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~----------~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~g 70 (318)
++++++|+++ |++|+++.|+.+.. ...+++.+... .+ .....++.++.+|++++
T Consensus 25 ~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~Dv~~~--- 88 (286)
T 3uve_A 25 RSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETAD-----LV------KGHNRRIVTAEVDVRDY--- 88 (286)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHH-----HH------HTTTCCEEEEECCTTCH---
T ss_pred HHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHH-----HH------hhcCCceEEEEcCCCCH---
Confidence 3688999998 99999999863211 11233333211 00 22245789999999986
Q ss_pred CCHHHHHHHhc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEec
Q psy7539 71 ISAEDRQMLSE-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVST 131 (318)
Q Consensus 71 l~~~~~~~~~~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS 131 (318)
+++..+++ ++|++||+||.... ...++..+++|+.|+.++++++... +...+||++||
T Consensus 89 ---~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS 165 (286)
T 3uve_A 89 ---DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS 165 (286)
T ss_dssp ---HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred ---HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence 56666654 79999999997422 1345678999999999999987642 12358999999
Q ss_pred cccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEec
Q psy7539 132 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILR 207 (318)
Q Consensus 132 ~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR 207 (318)
..+.... | ....|+.||.+.+.+.+.++. +|+++.+++
T Consensus 166 ~~~~~~~----------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~ 207 (286)
T 3uve_A 166 VGGLKAY----------P----------------------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVH 207 (286)
T ss_dssp GGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred hhhccCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEe
Confidence 7765321 0 016899999999998887654 589999999
Q ss_pred ccccccccCCCCCC---cccCC--CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEE
Q psy7539 208 PSIIIPIWKDPLPG---WTDNI--NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 282 (318)
Q Consensus 208 ~~~v~G~~~~~~~g---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ 282 (318)
||.|..+....... +.... ..+... ..... .....+..+.+.+|+|++++.++...... ..+.++
T Consensus 208 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~p~r~~~p~dvA~~v~fL~s~~a~~--itG~~i 277 (286)
T 3uve_A 208 PTHVKTPMLHNEGTFKMFRPDLENPGPDDM-APICQ-------MFHTLPIPWVEPIDISNAVLFFASDEARY--ITGVTL 277 (286)
T ss_dssp ESSBSSTTTSSHHHHHHHCTTSSSCCHHHH-HHHHH-------TTCSSSCSCBCHHHHHHHHHHHHSGGGTT--CCSCEE
T ss_pred cCcccCCcccccchhhhccccccccchhhH-HHHHH-------hhhccCCCcCCHHHHHHHHHHHcCccccC--CcCCEE
Confidence 99886643211000 00000 000000 00000 00111256889999999999988755431 248899
Q ss_pred EeeCC
Q psy7539 283 NLTAN 287 (318)
Q Consensus 283 ni~~~ 287 (318)
++.++
T Consensus 278 ~vdGG 282 (286)
T 3uve_A 278 PIDAG 282 (286)
T ss_dssp EESTT
T ss_pred eECCc
Confidence 99887
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-13 Score=120.32 Aligned_cols=208 Identities=11% Similarity=0.021 Sum_probs=136.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++.+.. .....++.++.+|++++ +++..++
T Consensus 43 ~aia~~la~~--G~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 94 (277)
T 3gvc_A 43 LAVARRLADE--GCHVLCADIDGD------AADAAA--------------TKIGCGAAACRVDVSDE------QQIIAMV 94 (277)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHH------HHHHHH--------------HHHCSSCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHH--------------HHcCCcceEEEecCCCH------HHHHHHH
Confidence 3688999998 999999998522 222111 12235788999999986 5666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 95 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~----- 169 (277)
T 3gvc_A 95 DACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV----- 169 (277)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----
Confidence 4 78999999997532 2345678999999999999887542 244689999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++.....
T Consensus 170 ----~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~ 216 (277)
T 3gvc_A 170 ----GG-----------------------------TGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTA 216 (277)
T ss_dssp ----TT-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred ----CC-----------------------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHh
Confidence 00 17899999999998887654 589999999998866321100
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ...+ . .......... ......+.+.+|+|++++.++...... ..+.++++.++
T Consensus 217 ~~---~~~~--~----~~~~~~~~~~--~~~~~r~~~pedvA~~v~~L~s~~a~~--itG~~i~vdGG 271 (277)
T 3gvc_A 217 MA---MFDG--A----LGAGGARSMI--ARLQGRMAAPEEMAGIVVFLLSDDASM--ITGTTQIADGG 271 (277)
T ss_dssp HT---CC------------CCHHHHH--HHHHSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred hh---cchh--h----HHHHhhhhhh--hccccCCCCHHHHHHHHHHHcCCccCC--ccCcEEEECCc
Confidence 00 0000 0 0000000000 011235788999999999998765431 24889999887
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.7e-13 Score=117.33 Aligned_cols=205 Identities=13% Similarity=0.146 Sum_probs=134.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|... +..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 18 ~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 73 (246)
T 2uvd_A 18 RAIAIDLAKQ--GANVVVNYAGNE--QKANEVVDEI--------------KKLGSDAIAVRADVANA------EDVTNMV 73 (246)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCCH--HHHHHHHHHH--------------HhcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999988 999999998321 1111111111 11234788999999986 5676665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++.+++... .+..+||++||..+....
T Consensus 74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 148 (246)
T 2uvd_A 74 KQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN----- 148 (246)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-----
Confidence 5 79999999997532 2345678999999977776665421 256799999997654221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
++ ...|+.||.+.+.+.+.+.. +|+++++++||.+.++....
T Consensus 149 ----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~- 194 (246)
T 2uvd_A 149 ----PG-----------------------------QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV- 194 (246)
T ss_dssp ----TT-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC-
T ss_pred ----CC-----------------------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh-
Confidence 00 16899999999988776654 58999999999987643211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .....+.... ....+++.+|+|++++.++...... ..+..+++.++
T Consensus 195 ------~~~--~~~~~~~~~~---------p~~~~~~~~dvA~~~~~l~s~~~~~--~tG~~~~vdgG 243 (246)
T 2uvd_A 195 ------LDE--NIKAEMLKLI---------PAAQFGEAQDIANAVTFFASDQSKY--ITGQTLNVDGG 243 (246)
T ss_dssp ------CCT--THHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------cCH--HHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhcC--CCCCEEEECcC
Confidence 110 1111111110 1124889999999999988654321 24788988876
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2e-13 Score=118.11 Aligned_cols=195 Identities=12% Similarity=0.051 Sum_probs=134.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..++.++.+|++++ +++..++
T Consensus 22 ~~ia~~l~~~--G~~V~~~~r~~~~----------------------------~~~~~~~~~Dl~~~------~~v~~~~ 65 (264)
T 2dtx_A 22 RAIAERFVDE--GSKVIDLSIHDPG----------------------------EAKYDHIECDVTNP------DQVKASI 65 (264)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCCC----------------------------SCSSEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEecCccc----------------------------CCceEEEEecCCCH------HHHHHHH
Confidence 3688999998 9999999996432 13678899999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 66 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 140 (264)
T 2dtx_A 66 DHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT----- 140 (264)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC-----
Confidence 4 79999999997532 2345678999999999988887642 245799999998765321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-c--CCcEEEecccccccccCCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-A--GMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~--~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+. ..|+.||.+.+.+.+.+.. . .+++++++||.+.++...
T Consensus 141 ----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~--- 184 (264)
T 2dtx_A 141 ----KNA-----------------------------SAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVR--- 184 (264)
T ss_dssp ----TTB-----------------------------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHH---
T ss_pred ----CCc-----------------------------hhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchh---
Confidence 011 7899999999999988765 2 289999999977542100
Q ss_pred CcccCCC-----chH----HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNIN-----GPT----GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ... .....+.. ......+++++|+|++++.++...... ..+.++++.++
T Consensus 185 ----~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~~~~~p~dvA~~v~~l~s~~~~~--~tG~~i~vdGG 245 (264)
T 2dtx_A 185 ----KAAELEVGSDPMRIEKKISEWGH---------EHPMQRIGKPQEVASAVAFLASREASF--ITGTCLYVDGG 245 (264)
T ss_dssp ----HHHHHHHCSCHHHHHHHHHHHHH---------HSTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ----hhhhcccccCchhhHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCchhcC--CCCcEEEECCC
Confidence 000 000 11111111 011235899999999999998764321 24788998877
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.6e-14 Score=122.54 Aligned_cols=204 Identities=11% Similarity=0.057 Sum_probs=137.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 42 ~aia~~la~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 96 (270)
T 3ftp_A 42 RAIALELARR--GAMVIGTATTEA---GAEGIGAAF--------------KQAGLEGRGAVLNVNDA------TAVDALV 96 (270)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHH---HHHHHHHHH--------------HHHTCCCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCcEEEEEEeCCCH------HHHHHHH
Confidence 3688999998 999999999532 112222111 12234788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 97 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 171 (270)
T 3ftp_A 97 ESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN----- 171 (270)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----
Confidence 4 78999999997532 2345678999999999999987531 134689999997664321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|..+...
T Consensus 172 ----~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-- 216 (270)
T 3ftp_A 172 ----PG-----------------------------QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK-- 216 (270)
T ss_dssp ----TT-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH--
T ss_pred ----CC-----------------------------chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh--
Confidence 00 17899999999988877654 5899999999987553211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. +......+.. ......+.+.+|+|++++.++...... ..+.++++.++
T Consensus 217 -----~~--~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~~--itG~~i~vdGG 266 (270)
T 3ftp_A 217 -----GL--PQEQQTALKT---------QIPLGRLGSPEDIAHAVAFLASPQAGY--ITGTTLHVNGG 266 (270)
T ss_dssp -----HS--CHHHHHHHHT---------TCTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hc--CHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCCCcCC--ccCcEEEECCC
Confidence 01 0111111111 112345789999999999988654321 24889999887
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-13 Score=119.55 Aligned_cols=213 Identities=11% Similarity=0.079 Sum_probs=138.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 25 ~aia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 79 (264)
T 3ucx_A 25 TTLARRCAEQ--GADLVLAARTVE---RLEDVAKQV--------------TDTGRRALSVGTDITDD------AQVAHLV 79 (264)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEeCCHH---HHHHHHHHH--------------HhcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999522 111221111 22235789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+-.+||++||..+....
T Consensus 80 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 154 (264)
T 3ucx_A 80 DETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQ----- 154 (264)
T ss_dssp HHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCC-----
T ss_pred HHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCC-----
Confidence 4 78999999987421 1345678999999999999887542 112589999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++.....
T Consensus 155 ----~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 201 (264)
T 3ucx_A 155 ----AK-----------------------------YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSY 201 (264)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHH
T ss_pred ----Cc-----------------------------cHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHH
Confidence 01 16899999999998887765 589999999998866321100
Q ss_pred CCcc-c-CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWT-D-NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... . .-.....+...+. .......+.+.+|+|++++.++...... ..+.++++.++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~p~dvA~~v~~L~s~~~~~--itG~~i~vdGG 260 (264)
T 3ucx_A 202 FEHQAGKYGTSVEDIYNAAA---------AGSDLKRLPTEDEVASAILFMASDLASG--ITGQALDVNCG 260 (264)
T ss_dssp HHHHHHHTTCCHHHHHHHHH---------TTSSSSSCCBHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred HHhhhhhcCCCHHHHHHHHh---------ccCCcccCCCHHHHHHHHHHHcCccccC--CCCCEEEECCC
Confidence 0000 0 0000011111111 2223346889999999999988764431 24889999887
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.4e-13 Score=117.93 Aligned_cols=206 Identities=8% Similarity=-0.002 Sum_probs=136.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+.+.... .....++.++.+|++++ +++..++
T Consensus 39 ~~~a~~l~~~--G~~v~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~v~~~~ 94 (269)
T 3gk3_A 39 AAISRRLHDA--GMAVAVSHSERND--HVSTWLMHE--------------RDAGRDFKAYAVDVADF------ESCERCA 94 (269)
T ss_dssp HHHHHHHHTT--TCEEEEEECSCHH--HHHHHHHHH--------------HTTTCCCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCchH--HHHHHHHHH--------------HhcCCceEEEEecCCCH------HHHHHHH
Confidence 3688999988 9999998864321 111111110 12235799999999986 5666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..+....
T Consensus 95 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 169 (269)
T 3gk3_A 95 EKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA----- 169 (269)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----
T ss_pred HHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC-----
Confidence 4 79999999997532 2345678999999999999887531 245689999997654321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.+.. .|+++.+++||.|........
T Consensus 170 ----~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 216 (269)
T 3gk3_A 170 ----FG-----------------------------QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV 216 (269)
T ss_dssp ----TT-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-
T ss_pred ----CC-----------------------------cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh
Confidence 00 17899999999988877655 589999999998865432111
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ... .. ...........+.+.+|+|++++.++...... ..+.++++.++
T Consensus 217 ~---------~~~----~~----~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~--itG~~i~vdgG 265 (269)
T 3gk3_A 217 P---------QDV----LE----AKILPQIPVGRLGRPDEVAALIAFLCSDDAGF--VTGADLAINGG 265 (269)
T ss_dssp -----------------------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTT--CCSCEEEESTT
T ss_pred c---------hhH----HH----HHhhhcCCcCCccCHHHHHHHHHHHhCCCcCC--eeCcEEEECCC
Confidence 0 000 00 00111122345778999999999988765421 24889999988
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.1e-13 Score=117.96 Aligned_cols=212 Identities=13% Similarity=0.019 Sum_probs=141.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 22 ~aia~~la~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 76 (280)
T 3tox_A 22 RAAALLFARE--GAKVVVTARNGN---ALAELTDEI--------------AGGGGEAAALAGDVGDE------ALHEALV 76 (280)
T ss_dssp HHHHHHHHHT--TCEEEECCSCHH---HHHHHHHHH--------------TTTTCCEEECCCCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHH--------------HhcCCcEEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999998532 112222111 22235789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..++|++||..++...
T Consensus 77 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 152 (280)
T 3tox_A 77 ELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG---- 152 (280)
T ss_dssp HHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC----
Confidence 4 79999999996421 1345678999999999999987542 244699999997764210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
..+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++....
T Consensus 153 ----~~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~ 199 (280)
T 3tox_A 153 ----FAG-----------------------------VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFA 199 (280)
T ss_dssp ----CTT-----------------------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGG
T ss_pred ----CCC-----------------------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhh
Confidence 001 17899999999999887765 58999999999987643211
Q ss_pred CCCcccCCCc-hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 219 LPGWTDNING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 219 ~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
.... .......+.. ......+...+|+|++++.++...... ..+.++++.++ ..++
T Consensus 200 ------~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~a~~--itG~~i~vdGG--~~~~ 256 (280)
T 3tox_A 200 ------NLPGAAPETRGFVEG---------LHALKRIARPEEIAEAALYLASDGASF--VTGAALLADGG--ASVT 256 (280)
T ss_dssp ------GSTTCCTHHHHHHHT---------TSTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT--GGGC
T ss_pred ------hccccCHHHHHHHhc---------cCccCCCcCHHHHHHHHHHHhCccccC--CcCcEEEECCC--cccc
Confidence 0100 0111111111 112235789999999999998765431 24889999988 5544
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-13 Score=118.48 Aligned_cols=205 Identities=12% Similarity=0.061 Sum_probs=138.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... +.+.+.+. .....++.++.+|++++ +++..++
T Consensus 55 ~aia~~la~~--G~~V~~~~r~~~~~---~~~~~~l~-------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 110 (293)
T 3rih_A 55 RGIATVFARA--GANVAVAARSPREL---SSVTAELG-------------ELGAGNVIGVRLDVSDP------GSCADAA 110 (293)
T ss_dssp HHHHHHHHHT--TCEEEEEESSGGGG---HHHHHHHT-------------TSSSSCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHHHH---HHHHHHHH-------------hhCCCcEEEEEEeCCCH------HHHHHHH
Confidence 3688999998 99999999964322 11211111 11125789999999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++. + .+..+||++||..+....
T Consensus 111 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~~~g~iV~isS~~~~~~~---- 185 (293)
T 3rih_A 111 RTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA-SGRGRVILTSSITGPVTG---- 185 (293)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH-HSSCEEEEECCSBTTTBB----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCEEEEEeChhhccCC----
Confidence 3 68999999997522 23456789999999999999874 3 256799999997653110
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
..+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++...
T Consensus 186 ----~~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~- 231 (293)
T 3rih_A 186 ----YPG-----------------------------WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV- 231 (293)
T ss_dssp ----CTT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH-
T ss_pred ----CCC-----------------------------CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh-
Confidence 000 17899999999999887654 5899999999988764211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . ..+...+.... ...-+...+|+|++++.++...... ..+.++++.++
T Consensus 232 ------~~-~-~~~~~~~~~~~---------p~~r~~~p~dvA~~v~fL~s~~a~~--itG~~i~vdGG 281 (293)
T 3rih_A 232 ------DM-G-EEYISGMARSI---------PMGMLGSPVDIGHLAAFLATDEAGY--ITGQAIVVDGG 281 (293)
T ss_dssp ------HT-C-HHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------hc-c-HHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCccccC--CCCCEEEECCC
Confidence 00 1 12222222221 1123567899999999988654431 24889999887
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=4e-13 Score=116.89 Aligned_cols=205 Identities=12% Similarity=0.012 Sum_probs=137.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.++. ....++.++.+|++++ +++..++
T Consensus 22 ~~~a~~l~~~--G~~V~~~~r~~~---~~~~~~~l~---------------~~~~~~~~~~~D~~~~------~~v~~~~ 75 (275)
T 2pd4_A 22 YGIAQSCFNQ--GATLAFTYLNES---LEKRVRPIA---------------QELNSPYVYELDVSKE------EHFKSLY 75 (275)
T ss_dssp HHHHHHHHTT--TCEEEEEESSTT---THHHHHHHH---------------HHTTCCCEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH---------------HhcCCcEEEEcCCCCH------HHHHHHH
Confidence 3688999988 999999999753 222333221 1112478899999986 5666655
Q ss_pred c-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhcC-CCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++...- ...+||++||..+....
T Consensus 76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--- 152 (275)
T 2pd4_A 76 NSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM--- 152 (275)
T ss_dssp HHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---
T ss_pred HHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC---
Confidence 4 68999999997532 13356789999999999999998631 12589999997653210
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.+ ...|+.||.+.+.+.+.+.. +|+++.+++||.|.++...
T Consensus 153 ------~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 197 (275)
T 2pd4_A 153 ------AH-----------------------------YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASS 197 (275)
T ss_dssp ------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred ------CC-----------------------------chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhh
Confidence 01 16799999999999887765 4899999999988764321
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.......+...+.... ...-+.+.+|+|++++.++...... ..+..+++.++
T Consensus 198 -------~~~~~~~~~~~~~~~~---------p~~~~~~p~dva~~~~~l~s~~~~~--~tG~~~~vdgg 249 (275)
T 2pd4_A 198 -------GIADFRMILKWNEINA---------PLRKNVSLEEVGNAGMYLLSSLSSG--VSGEVHFVDAG 249 (275)
T ss_dssp -------GSTTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -------hccccHHHHHHHHhcC---------CcCCCCCHHHHHHHHHHHhCccccC--CCCCEEEECCC
Confidence 1111112222221110 0123678999999999998654321 24778888877
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.6e-13 Score=118.23 Aligned_cols=197 Identities=14% Similarity=0.104 Sum_probs=135.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. + +. .....++.++.+|++++ +++..++
T Consensus 23 ~aia~~l~~~--G~~V~~~~r~~~-----~-~~-----------------~~~~~~~~~~~~D~~~~------~~v~~~~ 71 (257)
T 3tl3_A 23 LATTKRLLDA--GAQVVVLDIRGE-----D-VV-----------------ADLGDRARFAAADVTDE------AAVASAL 71 (257)
T ss_dssp HHHHHHHHHH--TCEEEEEESSCH-----H-HH-----------------HHTCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCchH-----H-HH-----------------HhcCCceEEEECCCCCH------HHHHHHH
Confidence 3689999999 999999999321 1 11 22235789999999986 5666666
Q ss_pred c------CccEEEEcccccC-----------cchhHHHHHHHhHHHHHHHHHHHHhc-----------CCCccEEEEecc
Q psy7539 81 E------TIHIVYHIAATVR-----------FDDYMQTYVFLNTRGTRDMLNLSKQM-----------IHLQLFVYVSTA 132 (318)
Q Consensus 81 ~------~~d~Vih~Aa~~~-----------~~~~~~~~~~~Nv~gt~~ll~~a~~~-----------~~~~~~v~~SS~ 132 (318)
+ ++|++||+||... ....++..+++|+.|+.++++++... .+..++|++||.
T Consensus 72 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~ 151 (257)
T 3tl3_A 72 DLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASV 151 (257)
T ss_dssp HHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCC
T ss_pred HHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcch
Confidence 5 8999999999742 12345678999999999999988753 123479999997
Q ss_pred ccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecc
Q psy7539 133 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRP 208 (318)
Q Consensus 133 ~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~ 208 (318)
.++.... . ...|+.||.+.+.+.+.++. +|+++.+++|
T Consensus 152 ~~~~~~~--------------------------------~------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~P 193 (257)
T 3tl3_A 152 AAFDGQI--------------------------------G------QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAP 193 (257)
T ss_dssp C--CCHH--------------------------------H------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred hhcCCCC--------------------------------C------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEe
Confidence 7643210 0 06899999999988877654 5899999999
Q ss_pred cccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 209 SIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 209 ~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
|.|..+... .. +........... .....+.+.+|+|++++.++..... .+.++++.++
T Consensus 194 G~v~T~~~~-------~~--~~~~~~~~~~~~--------~~~~r~~~p~dva~~v~~l~s~~~i----tG~~i~vdGG 251 (257)
T 3tl3_A 194 GLFDTPLLA-------SL--PEEARASLGKQV--------PHPSRLGNPDEYGALAVHIIENPML----NGEVIRLDGA 251 (257)
T ss_dssp CSBCCTTC------------CHHHHHHHHHTS--------SSSCSCBCHHHHHHHHHHHHHCTTC----CSCEEEESTT
T ss_pred cCccChhhh-------hc--cHHHHHHHHhcC--------CCCCCccCHHHHHHHHHHHhcCCCC----CCCEEEECCC
Confidence 988653211 11 111222222211 1113578999999999999976443 5889999887
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=7.6e-13 Score=113.79 Aligned_cols=205 Identities=12% Similarity=0.041 Sum_probs=137.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|.... ...+.+... .....++.++.+|+++. +++..++
T Consensus 27 ~~ia~~l~~~--G~~v~~~~~~~~~-~~~~~~~~~---------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 82 (256)
T 3ezl_A 27 TSICQRLHKD--GFRVVAGCGPNSP-RRVKWLEDQ---------------KALGFDFYASEGNVGDW------DSTKQAF 82 (256)
T ss_dssp HHHHHHHHHT--TEEEEEEECTTCS-SHHHHHHHH---------------HHTTCCCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCCHH-HHHHHHHHH---------------HhcCCeeEEEecCCCCH------HHHHHHH
Confidence 3688999998 9999988854332 222222222 22235789999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 83 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 157 (256)
T 3ezl_A 83 DKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ----- 157 (256)
T ss_dssp HHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC-----
T ss_pred HHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC-----
Confidence 4 78999999997532 2345679999999988887766321 255789999997664321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.+.. +|+++.+++||.+.++...
T Consensus 158 ----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-- 202 (256)
T 3ezl_A 158 ----FG-----------------------------QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK-- 202 (256)
T ss_dssp ----SC-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--
T ss_pred ----CC-----------------------------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccc--
Confidence 11 17899999999988877654 5899999999988653211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . ......+... .....+.+.+|+|++++.++...... ..+.++++.++
T Consensus 203 -----~~-~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~~--~tG~~i~vdgG 252 (256)
T 3ezl_A 203 -----AI-R-PDVLEKIVAT---------IPVRRLGSPDEIGSIVAWLASEESGF--STGADFSLNGG 252 (256)
T ss_dssp -----TS-C-HHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----cc-C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCCcccC--CcCcEEEECCC
Confidence 11 1 1222222221 11235778999999999988654321 24889999887
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=6e-13 Score=116.91 Aligned_cols=205 Identities=9% Similarity=0.024 Sum_probs=138.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|++..|+. ...+.+.+. .....++.++.+|++++ +++..++
T Consensus 47 ~aia~~la~~--G~~V~~~~r~~---~~~~~~~~~---------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 100 (293)
T 3grk_A 47 WGIAKAAREA--GAELAFTYQGD---ALKKRVEPL---------------AEELGAFVAGHCDVADA------ASIDAVF 100 (293)
T ss_dssp HHHHHHHHHT--TCEEEEEECSH---HHHHHHHHH---------------HHHHTCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCH---HHHHHHHHH---------------HHhcCCceEEECCCCCH------HHHHHHH
Confidence 3688999998 99999998852 222333322 11124688999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|++||+||.... ...+...+++|+.|+.++++++... ....+||++||..+....
T Consensus 101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~--- 177 (293)
T 3grk_A 101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM--- 177 (293)
T ss_dssp HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC---
T ss_pred HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC---
Confidence 4 78999999997531 2345678999999999999998763 123589999997764321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.. ...|+.||.+.+.+.+.++. +|+++.+++||.|.+....
T Consensus 178 ------~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 222 (293)
T 3grk_A 178 ------PN-----------------------------YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAAS 222 (293)
T ss_dssp ------TT-----------------------------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----
T ss_pred ------Cc-----------------------------hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhh
Confidence 00 17899999999999887765 5899999999988664321
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
............... ....-+...+|+|++++.++...... ..+.++++.++
T Consensus 223 -------~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~~~--itG~~i~vdGG 274 (293)
T 3grk_A 223 -------GIGDFRYILKWNEYN---------APLRRTVTIDEVGDVGLYFLSDLSRS--VTGEVHHADSG 274 (293)
T ss_dssp ---------CCHHHHHHHHHHH---------STTSSCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -------cccchHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCccccC--CcceEEEECCC
Confidence 111111222222211 01124678999999999988764431 25889999887
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=7.2e-13 Score=116.55 Aligned_cols=204 Identities=9% Similarity=0.026 Sum_probs=139.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+.. ..+.+.+.. ....++.++.+|++++ +++..+++
T Consensus 47 ~ia~~la~~--G~~V~~~~r~~~---~~~~~~~~~---------------~~~~~~~~~~~Dv~d~------~~v~~~~~ 100 (296)
T 3k31_A 47 GIAKAVCAQ--GAEVALTYLSET---FKKRVDPLA---------------ESLGVKLTVPCDVSDA------ESVDNMFK 100 (296)
T ss_dssp HHHHHHHHT--TCEEEEEESSGG---GHHHHHHHH---------------HHHTCCEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEeCChH---HHHHHHHHH---------------HhcCCeEEEEcCCCCH------HHHHHHHH
Confidence 688999998 999999999642 223333221 1123568899999986 56666654
Q ss_pred -------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
++|++||+||.... ...+...+++|+.|+.++++++... ....+||++||..+....
T Consensus 101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~---- 176 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV---- 176 (296)
T ss_dssp HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC----
T ss_pred HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC----
Confidence 68999999997532 1345678999999999999999863 123489999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.. ...|+.||.+.+.+.+.++. +|+++.+++||.|.+....
T Consensus 177 -----~~-----------------------------~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~- 221 (296)
T 3k31_A 177 -----PH-----------------------------YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASS- 221 (296)
T ss_dssp -----TT-----------------------------TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCC-
T ss_pred -----CC-----------------------------chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhh-
Confidence 00 17899999999999887765 5899999999988764321
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
................ ...-+...+|+|++++.++...... ..+.++++.++
T Consensus 222 ------~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~fL~s~~a~~--itG~~i~vdGG 273 (296)
T 3k31_A 222 ------GISDFHYILTWNKYNS---------PLRRNTTLDDVGGAALYLLSDLGRG--TTGETVHVDCG 273 (296)
T ss_dssp ------SCHHHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------cccchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCccCC--ccCCEEEECCC
Confidence 1111111222221110 1124677899999999998764431 24889999887
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.54 E-value=3e-13 Score=119.29 Aligned_cols=197 Identities=10% Similarity=0.022 Sum_probs=125.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.+ ..+.+.+.+ .....++.++.+|+++. +++..++
T Consensus 45 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 99 (301)
T 3tjr_A 45 LATATEFARR--GARLVLSDVDQP---ALEQAVNGL--------------RGQGFDAHGVVCDVRHL------DEMVRLA 99 (301)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHH--------------HhcCCceEEEEccCCCH------HHHHHHH
Confidence 3688999998 999999999532 111111111 12235789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... +...+||++||..++....
T Consensus 100 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--- 176 (301)
T 3tjr_A 100 DEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA--- 176 (301)
T ss_dssp HHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT---
T ss_pred HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC---
Confidence 4 78999999997522 2345678999999999999987532 1246899999977653210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
. ...|+.||.+.+.+.+.+.. .|+++++++||.|..+..
T Consensus 177 ------~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~-- 219 (301)
T 3tjr_A 177 ------G-----------------------------LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLV-- 219 (301)
T ss_dssp ------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHH--
T ss_pred ------C-----------------------------chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccc--
Confidence 0 17899999999988877654 589999999997754211
Q ss_pred CCCcccCCCchHHHHHH---HhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 219 LPGWTDNINGPTGLLIG---AGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
........ ..........+.......+++++|+|++++.++.++
T Consensus 220 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 220 ---------SNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp ---------HHHHHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred ---------cccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence 00000000 000000111123344567899999999999999874
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.53 E-value=9.3e-14 Score=120.36 Aligned_cols=201 Identities=9% Similarity=0.051 Sum_probs=132.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+. +++++.. .....++.++.+|++++ +++..++
T Consensus 41 ~aia~~la~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 92 (266)
T 3grp_A 41 EAIARCFHAQ--GAIVGLHGTRE------DKLKEIA--------------ADLGKDVFVFSANLSDR------KSIKQLA 92 (266)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HHHCSSEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHH--------------HHhCCceEEEEeecCCH------HHHHHHH
Confidence 3688999998 99999998852 2222221 12235789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++.+++... .+..+||++||..+.....
T Consensus 93 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~---- 168 (266)
T 3grp_A 93 EVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNP---- 168 (266)
T ss_dssp HHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCC----
Confidence 4 79999999997532 2345678999999977666655321 2557999999976543210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
+ ...|+.||.+.+.+.+.++. +|+++.+++||.+.++...
T Consensus 169 -----~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~-- 212 (266)
T 3grp_A 169 -----G-----------------------------QTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTD-- 212 (266)
T ss_dssp -----C-----------------------------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH--
T ss_pred -----C-----------------------------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhh--
Confidence 0 07899999999988877655 5899999999988653211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . ......+... .....+.+.+|+|++++.++...... ..+.++++.++
T Consensus 213 -----~~-~-~~~~~~~~~~---------~p~~r~~~~edvA~~v~~L~s~~~~~--itG~~i~vdGG 262 (266)
T 3grp_A 213 -----KL-N-EKQKEAIMAM---------IPMKRMGIGEEIAFATVYLASDEAAY--LTGQTLHINGG 262 (266)
T ss_dssp -----TC-C-HHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----cc-C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccccC--ccCCEEEECCC
Confidence 11 1 1122222221 12345778999999999988765431 24889999887
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-13 Score=120.59 Aligned_cols=206 Identities=15% Similarity=0.061 Sum_probs=128.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. +..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 43 ~aia~~la~~--G~~V~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 98 (280)
T 4da9_A 43 LGIARALAAS--GFDIAITGIGDA--EGVAPVIAEL--------------SGLGARVIFLRADLADL------SSHQATV 98 (280)
T ss_dssp HHHHHHHHHT--TCEEEEEESCCH--HHHHHHHHHH--------------HHTTCCEEEEECCTTSG------GGHHHHH
T ss_pred HHHHHHHHHC--CCeEEEEeCCCH--HHHHHHHHHH--------------HhcCCcEEEEEecCCCH------HHHHHHH
Confidence 3688999998 999999987422 1111111111 22235789999999987 4666555
Q ss_pred c-------CccEEEEcccccC---------cchhHHHHHHHhHHHHHHHHHHHHhc---CC---CccEEEEeccccccCC
Q psy7539 81 E-------TIHIVYHIAATVR---------FDDYMQTYVFLNTRGTRDMLNLSKQM---IH---LQLFVYVSTAYCHPKE 138 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~---~~~~v~~SS~~~~~~~ 138 (318)
+ ++|++||+||... ....++..+++|+.|+.++++++... .+ ..+||++||..+....
T Consensus 99 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 178 (280)
T 4da9_A 99 DAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS 178 (280)
T ss_dssp HHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------
T ss_pred HHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC
Confidence 4 7899999999731 12345678889999999988887643 11 4589999997764321
Q ss_pred cccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccc
Q psy7539 139 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPI 214 (318)
Q Consensus 139 ~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~ 214 (318)
.. ...|+.||.+.+.+.+.++. +|+++.+++||.|.++
T Consensus 179 ---------~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 220 (280)
T 4da9_A 179 ---------PE-----------------------------RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSD 220 (280)
T ss_dssp ----------C-----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred ---------CC-----------------------------ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCC
Confidence 00 16899999999999887764 5799999999988664
Q ss_pred cCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 215 WKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 215 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..... .. ........ .......+...+|+|++++.++...... ..+.++++.++
T Consensus 221 ~~~~~-------~~--~~~~~~~~--------~~~p~~r~~~pedvA~~v~~L~s~~~~~--itG~~i~vdGG 274 (280)
T 4da9_A 221 MTAAV-------SG--KYDGLIES--------GLVPMRRWGEPEDIGNIVAGLAGGQFGF--ATGSVIQADGG 274 (280)
T ss_dssp --------------------------------------CCBCHHHHHHHHHHHHTSTTGG--GTTCEEEESTT
T ss_pred chhhc-------ch--hHHHHHhh--------cCCCcCCcCCHHHHHHHHHHHhCccccC--CCCCEEEECCC
Confidence 32111 00 00000000 0112235778999999999988654321 14889999887
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2.2e-13 Score=117.31 Aligned_cols=210 Identities=12% Similarity=0.117 Sum_probs=140.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++++.. .....++.++.+|++++ +++..++
T Consensus 22 ~a~a~~l~~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 73 (255)
T 4eso_A 22 LATVRRLVEG--GAEVLLTGRNE------SNIARIR--------------EEFGPRVHALRSDIADL------NEIAVLG 73 (255)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HHHGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHH--------------HHhCCcceEEEccCCCH------HHHHHHH
Confidence 3688999998 99999999952 1222211 12235789999999986 4666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... ....+||++||..++...
T Consensus 74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------- 146 (255)
T 4eso_A 74 AAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH------- 146 (255)
T ss_dssp HHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC-------
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-------
Confidence 3 78999999997532 2345678999999999999999863 122489999997764321
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
++ ...|+.||.+.+.+.+.++. +|+++..++||.+.++.....
T Consensus 147 --~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-- 193 (255)
T 4eso_A 147 --PG-----------------------------MSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVA-- 193 (255)
T ss_dssp --TT-----------------------------BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCT--
T ss_pred --CC-----------------------------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccc--
Confidence 01 17899999999998887765 589999999999876432110
Q ss_pred cccCCCch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeH
Q psy7539 222 WTDNINGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITW 294 (318)
Q Consensus 222 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~ 294 (318)
..... ...+...... ......+.+.+|+|++++.++.. .. ...+.++++.++ ...++
T Consensus 194 ---~~~~~~~~~~~~~~~~--------~~p~~r~~~pedvA~~v~~L~s~-~~--~itG~~i~vdGG--~~~~l 251 (255)
T 4eso_A 194 ---GITEAERAEFKTLGDN--------ITPMKRNGTADEVARAVLFLAFE-AT--FTTGAKLAVDGG--LGQKL 251 (255)
T ss_dssp ---TSCHHHHHHHHHHHHH--------HSTTSSCBCHHHHHHHHHHHHHT-CT--TCCSCEEEESTT--TTTTB
T ss_pred ---cCChhhHHHHHHHHhc--------cCCCCCCcCHHHHHHHHHHHcCc-Cc--CccCCEEEECCC--ccccC
Confidence 11111 1111111110 01123467899999999988765 22 125889999988 54443
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=3.9e-13 Score=115.67 Aligned_cols=212 Identities=9% Similarity=0.014 Sum_probs=134.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 16 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~v~~~~ 70 (256)
T 1geg_A 16 KAIALRLVKD--GFAVAIADYNDA---TAKAVASEI--------------NQAGGHAVAVKVDVSDR------DQVFAAV 70 (256)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HHTTCCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCcEEEEEecCCCH------HHHHHHH
Confidence 3688999998 999999999532 111111111 11134688999999986 5677666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+ ..+||++||..+....
T Consensus 71 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 146 (256)
T 1geg_A 71 EQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN---- 146 (256)
T ss_dssp HHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC----
Confidence 5 79999999996422 2345678999999999888877542 13 5799999997654321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+. ...|+.||.+.+.+.+.+.. +|+++++++||.+.++....
T Consensus 147 -----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 192 (256)
T 1geg_A 147 -----PE-----------------------------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE 192 (256)
T ss_dssp -----TT-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH
T ss_pred -----CC-----------------------------chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhh
Confidence 00 16899999999998887654 58999999999886532100
Q ss_pred CCC-ccc--CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPG-WTD--NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... +.. +. ........+.. ......+.+.+|+|++++.++...... ..+..+++.++
T Consensus 193 ~~~~~~~~~~~-~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~l~s~~~~~--~tG~~i~vdGG 252 (256)
T 1geg_A 193 IDRQVSEAAGK-PLGYGTAEFAK---------RITLGRLSEPEDVAACVSYLASPDSDY--MTGQSLLIDGG 252 (256)
T ss_dssp HHHHHHHHHTC-CTTHHHHHHHT---------TCTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESSS
T ss_pred hhhhccccccC-ChHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCccccC--CCCCEEEeCCC
Confidence 000 000 00 00000011111 011234789999999999988765321 24788988877
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=3e-13 Score=116.22 Aligned_cols=204 Identities=9% Similarity=0.013 Sum_probs=132.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++.+.. .+...++.++.+|++++ +++..++
T Consensus 20 ~~ia~~l~~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~v~~~~ 71 (253)
T 1hxh_A 20 LEVVKLLLGE--GAKVAFSDINE------AAGQQLA--------------AELGERSMFVRHDVSSE------ADWTLVM 71 (253)
T ss_dssp HHHHHHHHHT--TCEEEEECSCH------HHHHHHH--------------HHHCTTEEEECCCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHH--------------HHcCCceEEEEccCCCH------HHHHHHH
Confidence 3688999998 99999998852 1222111 11134788999999986 5666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+..+.+++ ++. + .+||++||..++...
T Consensus 72 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~~---- 145 (253)
T 1hxh_A 72 AAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSIINMASVSSWLPI---- 145 (253)
T ss_dssp HHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEEEEEcchhhcCCC----
Confidence 4 57999999997532 2345678999998877766654 332 4 799999998765321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----c--CCcEEEecccccccccC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A--GMPCMILRPSIIIPIWK 216 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~--~~~~~ilR~~~v~G~~~ 216 (318)
.+ ...|+.||.+.+.+.+.+.. + |++++++|||.++++..
T Consensus 146 -----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~ 191 (253)
T 1hxh_A 146 -----EQ-----------------------------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM 191 (253)
T ss_dssp -----TT-----------------------------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHH
T ss_pred -----CC-----------------------------CccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchh
Confidence 01 16899999999999887764 3 89999999999877431
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... .... ......... .......+.+.+|+|++++.++...... ..+..+++.++
T Consensus 192 ~~~~--~~~~------~~~~~~~~~-----~~~p~~~~~~~~dvA~~~~~l~s~~~~~--~tG~~~~vdgG 247 (253)
T 1hxh_A 192 QASL--PKGV------SKEMVLHDP-----KLNRAGRAYMPERIAQLVLFLASDESSV--MSGSELHADNS 247 (253)
T ss_dssp HHHS--CTTC------CHHHHBCBT-----TTBTTCCEECHHHHHHHHHHHHSGGGTT--CCSCEEEESSS
T ss_pred hhcc--chhh------hHHHHhhhh-----ccCccCCCCCHHHHHHHHHHHcCccccC--CCCcEEEECCC
Confidence 1000 0000 000001000 0111234789999999999998765321 24788988876
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.53 E-value=6.1e-14 Score=121.52 Aligned_cols=199 Identities=11% Similarity=0.058 Sum_probs=133.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.... .....+.+|+++. +....++
T Consensus 42 ~aia~~la~~--G~~V~~~~r~~~~~----------------------------~~~~~~~~Dv~~~------~~~~~~~ 85 (266)
T 3uxy_A 42 GAVVTALRAA--GARVAVADRAVAGI----------------------------AADLHLPGDLREA------AYADGLP 85 (266)
T ss_dssp HHHHHHHHHT--TCEEEECSSCCTTS----------------------------CCSEECCCCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHHH----------------------------HhhhccCcCCCCH------HHHHHHH
Confidence 3688999998 99999999864322 1223457899875 4555444
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++ ++. +..+||++||..++...
T Consensus 86 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~---- 160 (266)
T 3uxy_A 86 GAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNVASCWGLRPG---- 160 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTBCC----
T ss_pred HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCCCC----
Confidence 3 79999999998532 2345678999999999999988 332 56799999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++....
T Consensus 161 -----~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 206 (266)
T 3uxy_A 161 -----PG-----------------------------HALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRT 206 (266)
T ss_dssp -----TT-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHH
T ss_pred -----CC-----------------------------ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhh
Confidence 01 16899999999999887765 58999999999886532100
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. +......+......+. .......+.+++|+|++++.++...... ..+.++++.++
T Consensus 207 ~--~~~~~~~~~~~~~~~~---------~~~p~~r~~~pedvA~~v~~L~s~~~~~--itG~~i~vdGG 262 (266)
T 3uxy_A 207 G--FAKRGFDPDRAVAELG---------RTVPLGRIAEPEDIADVVLFLASDAARY--LCGSLVEVNGG 262 (266)
T ss_dssp H--HHHTTCCHHHHHHHHH---------TTSTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred h--hhcccccchHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCchhcC--CcCCEEEECcC
Confidence 0 0000001111111121 1223346789999999999988765431 24889999887
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=6.4e-13 Score=114.91 Aligned_cols=190 Identities=11% Similarity=0.122 Sum_probs=131.1
Q ss_pred ChhHHHHHhhCCC---cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHH
Q psy7539 1 KVLLEKILRTCEN---VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQ 77 (318)
Q Consensus 1 ~~l~~~Ll~~~~~---~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~ 77 (318)
++|+++|+++ | ++|+++.|+..... .+.++ .....++.++.+|++++ +++.
T Consensus 35 ~~la~~L~~~--G~~~~~V~~~~r~~~~~~---~~~~l---------------~~~~~~~~~~~~Dl~~~------~~v~ 88 (267)
T 1sny_A 35 LGLVKALLNL--PQPPQHLFTTCRNREQAK---ELEDL---------------AKNHSNIHILEIDLRNF------DAYD 88 (267)
T ss_dssp HHHHHHHHTS--SSCCSEEEEEESCTTSCH---HHHHH---------------HHHCTTEEEEECCTTCG------GGHH
T ss_pred HHHHHHHHhc--CCCCcEEEEEecChhhhH---HHHHh---------------hccCCceEEEEecCCCh------HHHH
Confidence 3688999988 7 89999999765432 22221 11134789999999987 4666
Q ss_pred HHhc---------CccEEEEcccccC--------cchhHHHHHHHhHHHHHHHHHHHHhcC---------C-----CccE
Q psy7539 78 MLSE---------TIHIVYHIAATVR--------FDDYMQTYVFLNTRGTRDMLNLSKQMI---------H-----LQLF 126 (318)
Q Consensus 78 ~~~~---------~~d~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~~---------~-----~~~~ 126 (318)
.+++ ++|+|||+||... ....+...+++|+.|+.++++++...- + ..+|
T Consensus 89 ~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (267)
T 1sny_A 89 KLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAI 168 (267)
T ss_dssp HHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEE
T ss_pred HHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceE
Confidence 6655 7999999999754 123455689999999999999886430 1 4689
Q ss_pred EEEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCc
Q psy7539 127 VYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMP 202 (318)
Q Consensus 127 v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~ 202 (318)
|++||..++.... ...+. ..|+.||.+.|.++..+.. ++++
T Consensus 169 v~isS~~~~~~~~------~~~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~ 213 (267)
T 1sny_A 169 INMSSILGSIQGN------TDGGM-----------------------------YAYRTSKSALNAATKSLSVDLYPQRIM 213 (267)
T ss_dssp EEECCGGGCSTTC------CSCCC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEEecccccccCC------CCCCc-----------------------------hHHHHHHHHHHHHHHHHHHHhhcCCcE
Confidence 9999987654311 00111 6899999999999987654 4899
Q ss_pred EEEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEE
Q psy7539 203 CMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 282 (318)
Q Consensus 203 ~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ 282 (318)
++++|||.|.... .. ...+...+++|+.++.++...... ..+..|
T Consensus 214 v~~v~Pg~v~t~~-----------~~----------------------~~~~~~~~~~a~~~~~~~~~~~~~--~~G~~~ 258 (267)
T 1sny_A 214 CVSLHPGWVKTDM-----------GG----------------------SSAPLDVPTSTGQIVQTISKLGEK--QNGGFV 258 (267)
T ss_dssp EEEECCCSBCSTT-----------TC----------------------TTCSBCHHHHHHHHHHHHHHCCGG--GTTCEE
T ss_pred EEEeCCcceecCC-----------CC----------------------CCCCCCHHHHHHHHHHHHHhcCcC--CCCcEE
Confidence 9999999774321 11 013467899999999998764321 125555
Q ss_pred EeeC
Q psy7539 283 NLTA 286 (318)
Q Consensus 283 ni~~ 286 (318)
++.+
T Consensus 259 ~~~g 262 (267)
T 1sny_A 259 NYDG 262 (267)
T ss_dssp CTTS
T ss_pred ccCC
Confidence 5443
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=5.6e-13 Score=115.42 Aligned_cols=213 Identities=12% Similarity=0.030 Sum_probs=134.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. . .....++.++.+|++++ +++..++
T Consensus 27 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~--------~----~~~~~~~~~~~~D~~~~------~~v~~~~ 83 (267)
T 1iy8_A 27 RATAVRLAAE--GAKLSLVDVSSE---GLEASKAAVL--------E----TAPDAEVLTTVADVSDE------AQVEAYV 83 (267)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH--------H----HCTTCCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHH--------h----hcCCceEEEEEccCCCH------HHHHHHH
Confidence 3688999998 999999999532 1111111110 0 00134788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|+|||+||.... ...++..+++|+.|+..+.+++ ++. +..+||++||..+....
T Consensus 84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~--- 159 (267)
T 1iy8_A 84 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIRGI--- 159 (267)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSBC---
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhccCC---
Confidence 4 68999999997532 1345678999999988766554 442 56799999997764321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.+ ...|+.||.+.+.+.+.+.. +|+++.+++||.+.++...
T Consensus 160 ------~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 204 (267)
T 1iy8_A 160 ------GN-----------------------------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVE 204 (267)
T ss_dssp ------SS-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHH
T ss_pred ------CC-----------------------------CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchh
Confidence 00 16899999999998877654 5899999999988653210
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ...-.........+... .....+.+.+|+|++++.++...... ..+..+++.++
T Consensus 205 ~~~~-~~~~~~~~~~~~~~~~~---------~p~~r~~~~~dvA~~v~~l~s~~~~~--~tG~~i~vdGG 262 (267)
T 1iy8_A 205 NSMK-QLDPENPRKAAEEFIQV---------NPSKRYGEAPEIAAVVAFLLSDDASY--VNATVVPIDGG 262 (267)
T ss_dssp HHHH-HHCTTCHHHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred cccc-ccChhhhhhHHHHHhcc---------CCCCCCcCHHHHHHHHHHHcCccccC--CCCCEEEECCC
Confidence 0000 00000000000011111 11234789999999999998765321 24788999877
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2e-13 Score=118.36 Aligned_cols=212 Identities=11% Similarity=-0.015 Sum_probs=127.8
Q ss_pred ChhHHHHHh-hCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILR-TCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~-~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++++++|++ . |++|+++.|+.. ..+.+.+.+ .....+++++.+|+++. +++..+
T Consensus 18 ~~~a~~L~~~~--g~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~Dl~~~------~~~~~~ 72 (276)
T 1wma_A 18 LAIVRDLCRLF--SGDVVLTARDVT---RGQAAVQQL--------------QAEGLSPRFHQLDIDDL------QSIRAL 72 (276)
T ss_dssp HHHHHHHHHHS--SSEEEEEESSHH---HHHHHHHHH--------------HHTTCCCEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHhc--CCeEEEEeCChH---HHHHHHHHH--------------HhcCCeeEEEECCCCCH------HHHHHH
Confidence 368899999 7 899999999532 111111110 11134788999999986 567766
Q ss_pred hc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcC-CCccEEEEeccccccCC-c--c-
Q psy7539 80 SE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTAYCHPKE-K--V- 140 (318)
Q Consensus 80 ~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~v~~SS~~~~~~~-~--~- 140 (318)
++ ++|+|||+||.... ...+...+++|+.|+.++++++...- ...+||++||..++... . +
T Consensus 73 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~ 152 (276)
T 1wma_A 73 RDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPE 152 (276)
T ss_dssp HHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHH
T ss_pred HHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChh
Confidence 65 79999999997522 24456789999999999999998641 12489999997664210 0 0
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--------cCCcEEEecccccc
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--------AGMPCMILRPSIII 212 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--------~~~~~~ilR~~~v~ 212 (318)
..+.....+.+..........+.....+...+... .+...|+.||.+.|.+++.+.. .++++++++||.|.
T Consensus 153 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~ 231 (276)
T 1wma_A 153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEG-WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR 231 (276)
T ss_dssp HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTT-CCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred HHhhccccccchhhhhhhhhhhhhhhcccccccCC-CccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccc
Confidence 00000001111111100000000000000000000 0127899999999998877654 27999999999774
Q ss_pred cccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc
Q psy7539 213 PIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF 271 (318)
Q Consensus 213 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~ 271 (318)
+.. ... ..+.+.+|+|++++.++..+
T Consensus 232 t~~-----------~~~----------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 232 TDM-----------AGP----------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp STT-----------TCT----------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred cCc-----------CCc----------------------cccCChhHhhhhHhhhhcCc
Confidence 421 000 24689999999999998754
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.1e-13 Score=118.12 Aligned_cols=212 Identities=15% Similarity=0.023 Sum_probs=137.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 42 ~aia~~la~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 96 (283)
T 3v8b_A 42 RATALALAAD--GVTVGALGRTRT---EVEEVADEI--------------VGAGGQAIALEADVSDE------LQMRNAV 96 (283)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHH---HHHHHHHHH--------------TTTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHH
Confidence 3688999998 999999999532 112222111 22235788999999986 5666655
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++ ++. +..+||++||..+.....
T Consensus 97 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~-- 173 (283)
T 3v8b_A 97 RDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTRTFT-- 173 (283)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTBCC--
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcChhhccCCC--
Confidence 4 79999999997422 1345678999999999999988 332 557999999976643100
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.++ ...|+.||.+.+.+.+.++. +|+++.+++||.|..+...
T Consensus 174 -----~~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 219 (283)
T 3v8b_A 174 -----TPG-----------------------------ATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISD 219 (283)
T ss_dssp -----STT-----------------------------CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTC
T ss_pred -----CCC-----------------------------chHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccc
Confidence 001 17899999999999988765 5799999999988664322
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcc--cCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTC--ADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ...... . . ............ ..+...+|+|++++.++...... ..+.++++.++
T Consensus 220 ~~~------~~~~~~---~-~-~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~--itG~~i~vdGG 278 (283)
T 3v8b_A 220 NTK------LRHEEE---T-A-IPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARH--VTGSPVWIDGG 278 (283)
T ss_dssp CTT------BCCHHH---H-S-CCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred ccc------cccchh---h-h-hhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccC--CcCCEEEECcC
Confidence 110 000000 0 0 000000011111 34678899999999988765431 24888999877
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.1e-13 Score=120.00 Aligned_cols=221 Identities=12% Similarity=0.032 Sum_probs=142.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhcc---ceEEEeccCCCCCCCCCHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFE---KVIPINGDVAVPDLGISAEDRQ 77 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~gDl~~~~~gl~~~~~~ 77 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ ..... ++.++.+|++++ +++.
T Consensus 40 ~aia~~L~~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~~~~Dv~d~------~~v~ 94 (297)
T 1xhl_A 40 RSAAVIFAKE--GAQVTITGRNED---RLEETKQQI--------------LKAGVPAEKINAVVADVTEA------SGQD 94 (297)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HHTTCCGGGEEEEECCTTSH------HHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCCCceEEEEecCCCCH------HHHH
Confidence 3688999998 999999999532 111111111 11112 788999999986 5666
Q ss_pred HHhc-------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCC
Q psy7539 78 MLSE-------TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKE 138 (318)
Q Consensus 78 ~~~~-------~~d~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~ 138 (318)
.+++ ++|+|||+||.... ...++..+++|+.|+.++++++... .+ .+||++||..++...
T Consensus 95 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~ 173 (297)
T 1xhl_A 95 DIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA 173 (297)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC
T ss_pred HHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC
Confidence 6654 78999999996421 1335678999999999999887652 23 699999997764321
Q ss_pred cccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccc
Q psy7539 139 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPI 214 (318)
Q Consensus 139 ~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~ 214 (318)
.++. ..|+.||.+.+.+.+.+.. +|+++++++||.+.++
T Consensus 174 --------~~~~-----------------------------~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~ 216 (297)
T 1xhl_A 174 --------HSGY-----------------------------PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG 216 (297)
T ss_dssp --------CTTS-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred --------CCCc-----------------------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCc
Confidence 0111 6899999999998887653 5899999999988664
Q ss_pred cCCCCCCcccCCCch-----HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc-cCCCCCCCcEEEeeCCC
Q psy7539 215 WKDPLPGWTDNINGP-----TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF-LSNPGNTMRVINLTANK 288 (318)
Q Consensus 215 ~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~-~~~~~~~~~~~ni~~~~ 288 (318)
..... ..... ......+... .....+...+|+|++++.++... ... ..+..+++.++
T Consensus 217 ~~~~~-----~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~l~s~~~~~~--itG~~i~vdGG- 279 (297)
T 1xhl_A 217 FMGAM-----GLPETASDKLYSFIGSRKEC---------IPVGHCGKPEEIANIIVFLADRNLSSY--IIGQSIVADGG- 279 (297)
T ss_dssp HHHHT-----TCCHHHHHHHHHHHHHCTTT---------CTTSSCBCHHHHHHHHHHHHCHHHHTT--CCSCEEEESTT-
T ss_pred ccccc-----ccccccccchHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCCcccCC--ccCcEEEECCC-
Confidence 21100 00000 0111111110 11235889999999999998765 221 14789999888
Q ss_pred CCceeHHHHHHHHH
Q psy7539 289 DFQITWYDIIENGK 302 (318)
Q Consensus 289 ~~~~~~~el~~~i~ 302 (318)
....+.+....+.
T Consensus 280 -~~~~~~~~~~~~~ 292 (297)
T 1xhl_A 280 -STLVMGMQTHDLM 292 (297)
T ss_dssp -GGGCCGGGGSCHH
T ss_pred -ccccccccccchh
Confidence 6665555444333
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=5e-13 Score=115.75 Aligned_cols=203 Identities=13% Similarity=0.026 Sum_probs=136.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.+... ....+.+.++ .....++.++.+|++++ +++..++
T Consensus 40 ~~la~~l~~~--G~~v~i~~~r~~-~~~~~~~~~l---------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 95 (267)
T 4iiu_A 40 RAIARQLAAD--GFNIGVHYHRDA-AGAQETLNAI---------------VANGGNGRLLSFDVANR------EQCREVL 95 (267)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH-HHHHHHHHHH---------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCch-HHHHHHHHHH---------------HhcCCceEEEEecCCCH------HHHHHHH
Confidence 3688999998 999877766421 1111111111 22235789999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH-----hcCCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK-----QMIHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-----~~~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++. + .+..+||++||..+....
T Consensus 96 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~g~iv~isS~~~~~~~--- 171 (267)
T 4iiu_A 96 EHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA-RQGGRIITLSSVSGVMGN--- 171 (267)
T ss_dssp HHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSCEEEEEECCHHHHHCC---
T ss_pred HHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCcEEEEEcchHhccCC---
Confidence 4 79999999997532 23456789999999999999874 3 356799999997654321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.+ ...|+.||.+.+.+.+.+.. .|+++.+++||.|.++...
T Consensus 172 ------~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 216 (267)
T 4iiu_A 172 ------RG-----------------------------QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIE 216 (267)
T ss_dssp ------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC
T ss_pred ------CC-----------------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccc
Confidence 01 17899999988887776654 5899999999988664321
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ........... ....+...+|+|++++.++...... ..++++++.++
T Consensus 217 -------~~---~~~~~~~~~~~---------p~~~~~~~edva~~~~~L~s~~~~~--itG~~i~vdGG 265 (267)
T 4iiu_A 217 -------ME---ESALKEAMSMI---------PMKRMGQAEEVAGLASYLMSDIAGY--VTRQVISINGG 265 (267)
T ss_dssp -------CC---HHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -------cc---HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCCcccC--ccCCEEEeCCC
Confidence 11 12222222211 1235778999999999988764421 24889999876
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=6.3e-14 Score=121.41 Aligned_cols=219 Identities=11% Similarity=0.060 Sum_probs=137.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+.. .....++.++.+|++++ +++..++
T Consensus 21 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~l~~------------~~~~~~~~~~~~D~~~~------~~v~~~~ 77 (267)
T 2gdz_A 21 RAFAEALLLK--GAKVALVDWNLE---AGVQCKAALHE------------QFEPQKTLFIQCDVADQ------QQLRDTF 77 (267)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHTT------------TSCGGGEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHHHh------------hcCCCceEEEecCCCCH------HHHHHHH
Confidence 3688999998 999999999532 11111111110 00124688999999986 5666655
Q ss_pred c-------CccEEEEcccccCcchhHHHHHHHhHHHHHHHH----HHHHhcC--CCccEEEEeccccccCCcccccccCC
Q psy7539 81 E-------TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDML----NLSKQMI--HLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll----~~a~~~~--~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
+ ++|+|||+||... ...++..+++|+.|+..+. +.+++.+ ...+||++||.+++...
T Consensus 78 ~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 147 (267)
T 2gdz_A 78 RKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV--------- 147 (267)
T ss_dssp HHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---------
T ss_pred HHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC---------
Confidence 4 5799999999754 3456678899988665544 4444421 15789999998775421
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhh------hcCCcEEEecccccccccCCCCCC
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYM------EAGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~------~~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
.+ ...|+.||.+.+.+.+.+. ..|+++++++||.+.++...
T Consensus 148 ~~-----------------------------~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~---- 194 (267)
T 2gdz_A 148 AQ-----------------------------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE---- 194 (267)
T ss_dssp TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHH----
T ss_pred CC-----------------------------CchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhh----
Confidence 01 1689999999999887631 26899999999988653211
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHH
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 297 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el 297 (318)
..... ........ ....+ ..+.....+++++|+|++++.++..... .+.+|++.++ ...++.|+
T Consensus 195 ---~~~~~-~~~~~~~~-~~~~~-~~~~~~~~~~~~~dvA~~v~~l~s~~~~----~G~~~~v~gg--~~~~~~~~ 258 (267)
T 2gdz_A 195 ---SIEKE-ENMGQYIE-YKDHI-KDMIKYYGILDPPLIANGLITLIEDDAL----NGAIMKITTS--KGIHFQDY 258 (267)
T ss_dssp ---GGGCH-HHHGGGGG-GHHHH-HHHHHHHCCBCHHHHHHHHHHHHHCTTC----SSCEEEEETT--TEEEECCC
T ss_pred ---ccccc-cccchhhh-HHHHH-HHHhccccCCCHHHHHHHHHHHhcCcCC----CCcEEEecCC--CcccccCc
Confidence 00000 00000000 00000 0001123578999999999999876543 4889999998 77776553
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.9e-13 Score=118.05 Aligned_cols=213 Identities=11% Similarity=0.032 Sum_probs=138.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 38 ~aia~~la~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 92 (279)
T 3sju_A 38 LAVARTLAAR--GIAVYGCARDAK---NVSAAVDGL--------------RAAGHDVDGSSCDVTST------DEVHAAV 92 (279)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HTTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCcEEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999999522 111111111 12235789999999986 5666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh---c--CCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ---M--IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~---~--~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++.. + .+..+||++||..+....
T Consensus 93 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~--- 169 (279)
T 3sju_A 93 AAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV--- 169 (279)
T ss_dssp HHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC---
T ss_pred HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC---
Confidence 4 68999999997532 234567889999999999998764 1 245689999997764321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.. ...|+.||.+.+.+.+.++. +|+++.+++||.|.++...
T Consensus 170 ------~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 214 (279)
T 3sju_A 170 ------MY-----------------------------AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAE 214 (279)
T ss_dssp ------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHH
T ss_pred ------CC-----------------------------ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHH
Confidence 00 16899999999988877654 5899999999988653211
Q ss_pred CCC-CcccCCC-chHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLP-GWTDNIN-GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~-g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .+..... ........+.. ......+..++|+|++++.++...... ..+.++++.++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~a~~--itG~~i~vdGG 275 (279)
T 3sju_A 215 RVREGYARHWGVTEQEVHERFNA---------KIPLGRYSTPEEVAGLVGYLVTDAAAS--ITAQALNVCGG 275 (279)
T ss_dssp HHHHSCCSSSCCCHHHHHHHHHT---------TCTTSSCBCHHHHHHHHHHHTSSGGGG--CCSCEEEESTT
T ss_pred HHHhhhhhcccCChHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCccccC--cCCcEEEECCC
Confidence 000 0000000 01112222221 112345788999999999988754321 24889999887
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.9e-13 Score=116.98 Aligned_cols=206 Identities=13% Similarity=0.079 Sum_probs=135.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++.+. . ...++.++.+|++++ +++..+.
T Consensus 20 ~~ia~~l~~~--G~~V~~~~r~~~------~~~~~---------------~-~~~~~~~~~~D~~~~------~~~~~~~ 69 (246)
T 2ag5_A 20 QAAALAFARE--GAKVIATDINES------KLQEL---------------E-KYPGIQTRVLDVTKK------KQIDQFA 69 (246)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHGGG---------------G-GSTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH------HHHHH---------------H-hccCceEEEeeCCCH------HHHHHHH
Confidence 3688999998 999999998521 12111 1 113688999999986 4565554
Q ss_pred ---cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCC
Q psy7539 81 ---ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 81 ---~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
.++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++... +
T Consensus 70 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------~ 141 (246)
T 2ag5_A 70 NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG--------V 141 (246)
T ss_dssp HHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC--------C
T ss_pred HHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC--------C
Confidence 478999999997532 2345678999999999999887531 256799999997664321 0
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcc
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWT 223 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~ 223 (318)
.+. ..|+.||.+.|.+.+.+.. +|++++++|||.++++..... .
T Consensus 142 ~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~ 189 (246)
T 2ag5_A 142 VNR-----------------------------CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQER---I 189 (246)
T ss_dssp TTB-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHH---H
T ss_pred CCC-----------------------------ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhh---h
Confidence 011 6899999999999888764 489999999998877421100 0
Q ss_pred cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 224 DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..-..+......+.... ....+.+.+|+|++++.++...... ..++.+++.++
T Consensus 190 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~v~~l~s~~~~~--~tG~~i~vdgG 242 (246)
T 2ag5_A 190 QARGNPEEARNDFLKRQ---------KTGRFATAEEIAMLCVYLASDESAY--VTGNPVIIDGG 242 (246)
T ss_dssp HHSSSHHHHHHHHHHTC---------TTSSCEEHHHHHHHHHHHHSGGGTT--CCSCEEEECTT
T ss_pred hcccCcHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCccccC--CCCCEEEECCC
Confidence 00000111112222110 1124789999999999988654321 24788998876
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.52 E-value=9.9e-13 Score=115.83 Aligned_cols=221 Identities=14% Similarity=0.076 Sum_probs=140.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC------CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK------NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAE 74 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~------~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~ 74 (318)
++++++|+++ |++|+++.|++... ...+++.+... .+ .....++.++.+|++++ +
T Consensus 42 ~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~Dv~~~------~ 102 (299)
T 3t7c_A 42 RSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVR-----QV------EALGRRIIASQVDVRDF------D 102 (299)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHH-----HH------HHTTCCEEEEECCTTCH------H
T ss_pred HHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHH-----HH------HhcCCceEEEECCCCCH------H
Confidence 3688999998 99999999863211 11233332211 01 22245789999999986 5
Q ss_pred HHHHHhc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccc
Q psy7539 75 DRQMLSE-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCH 135 (318)
Q Consensus 75 ~~~~~~~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~ 135 (318)
++..+++ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+.
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~ 182 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL 182 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence 6666554 79999999997432 1345678999999999999987542 234689999997764
Q ss_pred cCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 136 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
.... . ...|+.||.+.+.+.+.++. .|+++.+++||.|
T Consensus 183 ~~~~---------~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v 224 (299)
T 3t7c_A 183 RGAE---------N-----------------------------IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSV 224 (299)
T ss_dssp SCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCB
T ss_pred cCCC---------C-----------------------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCc
Confidence 3210 0 16899999999998887765 4899999999988
Q ss_pred ccccCCCCCC---cccCCCch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 212 IPIWKDPLPG---WTDNINGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 212 ~G~~~~~~~g---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.++....... +......+ ......... .... .+..+...+|+|++++.++...... ..+.++++.++
T Consensus 225 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~p~r~~~pedvA~~v~fL~s~~a~~--itG~~i~vdGG 295 (299)
T 3t7c_A 225 ATPMLLNEPTYRMFRPDLENPTVEDFQVASR------QMHV-LPIPYVEPADISNAILFLVSDDARY--ITGVSLPVDGG 295 (299)
T ss_dssp SSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH------HHSS-SSCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred cCccccccchhhhhhhhhccchhhHHHHHhh------hhcc-cCcCCCCHHHHHHHHHHHhCccccc--CcCCEEeeCCC
Confidence 7643211000 00000000 000000000 0000 1145789999999999998765431 24889999887
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.1e-13 Score=115.23 Aligned_cols=205 Identities=9% Similarity=0.042 Sum_probs=132.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|... +..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 22 ~aia~~la~~--G~~V~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 77 (259)
T 3edm_A 22 RACAIRFAQE--GANVVLTYNGAA--EGAATAVAEI--------------EKLGRSALAIKADLTNA------AEVEAAI 77 (259)
T ss_dssp HHHHHHHHHT--TCEEEEEECSSC--HHHHHHHHHH--------------HTTTSCCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCCH--HHHHHHHHHH--------------HhcCCceEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999998866432 1122221111 22235788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcCCC--ccEEEEeccccc-cCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQMIHL--QLFVYVSTAYCH-PKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~--~~~v~~SS~~~~-~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... -. .++|++||..++ ...
T Consensus 78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~-~~~~g~iv~isS~~~~~~~~---- 152 (259)
T 3edm_A 78 SAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPK-MAKGGAIVTFSSQAGRDGGG---- 152 (259)
T ss_dssp HHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEEEECCHHHHHCCS----
T ss_pred HHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCEEEEEcCHHhccCCC----
Confidence 4 78999999986411 1334678999999999999999863 22 389999997664 210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.. ...|+.||.+.+.+.+.++. .++++..+.||.|..+....
T Consensus 153 -----~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~- 197 (259)
T 3edm_A 153 -----PG-----------------------------ALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDT- 197 (259)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC------
T ss_pred -----CC-----------------------------cHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccc-
Confidence 00 16899999999999988765 24899999999885532111
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .... ...........+.+++|+|++++.++...... ..+.+|++.++
T Consensus 198 ------~~~-~~~~---------~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~--itG~~i~vdGg 247 (259)
T 3edm_A 198 ------FTK-PEVR---------ERVAGATSLKREGSSEDVAGLVAFLASDDAAY--VTGACYDINGG 247 (259)
T ss_dssp ---------------------------------CCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESBC
T ss_pred ------ccC-hHHH---------HHHHhcCCCCCCcCHHHHHHHHHHHcCccccC--ccCCEEEECCC
Confidence 000 0000 00111122345778999999999988765431 24889999888
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=9.5e-13 Score=112.81 Aligned_cols=203 Identities=12% Similarity=0.083 Sum_probs=131.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. . ++.+.+ .....++.++.+|++++ +++..++
T Consensus 21 ~~ia~~l~~~--G~~V~~~~r~~~-~----~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 73 (249)
T 2ew8_A 21 RAIAERFAVE--GADIAIADLVPA-P----EAEAAI--------------RNLGRRVLTVKCDVSQP------GDVEAFG 73 (249)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCC-H----HHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCch-h----HHHHHH--------------HhcCCcEEEEEeecCCH------HHHHHHH
Confidence 3688999998 999999999641 1 111110 11234788999999986 5666654
Q ss_pred -------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 -------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.++|+|||+||.... ...++..+++|+.|+.++++++ ++. +..+||++||..++...
T Consensus 74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---- 148 (249)
T 2ew8_A 74 KQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYWLKI---- 148 (249)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSCC----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhccCC----
Confidence 379999999997532 2345678999999988888774 442 56799999998765421
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
++ ...|+.||.+.+.+.+.+.. .|+++++++||.+.++....
T Consensus 149 -----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 194 (249)
T 2ew8_A 149 -----EA-----------------------------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA 194 (249)
T ss_dssp -----SS-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------
T ss_pred -----CC-----------------------------chhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh
Confidence 01 16899999999999887754 48999999999886643110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..... . ........ .....+.+.+|+|++++.++...... ..+.++++.++
T Consensus 195 ------~~~~~--~-~~~~~~~~-------~~~~~~~~p~dva~~~~~l~s~~~~~--~tG~~~~vdGG 245 (249)
T 2ew8_A 195 ------SALSA--M-FDVLPNML-------QAIPRLQVPLDLTGAAAFLASDDASF--ITGQTLAVDGG 245 (249)
T ss_dssp --------------------CTT-------SSSCSCCCTHHHHHHHHHHTSGGGTT--CCSCEEEESSS
T ss_pred ------ccccc--h-hhHHHHhh-------CccCCCCCHHHHHHHHHHHcCcccCC--CCCcEEEECCC
Confidence 00000 0 00000000 11234789999999999998754321 24788998876
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=8.7e-14 Score=119.70 Aligned_cols=220 Identities=9% Similarity=-0.106 Sum_probs=130.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... .. . +.+|++++ +++..++
T Consensus 15 ~~~a~~l~~~--G~~V~~~~r~~~~~------------------------~~-----~-~~~Dl~~~------~~v~~~~ 56 (257)
T 1fjh_A 15 AATRKVLEAA--GHQIVGIDIRDAEV------------------------IA-----D-LSTAEGRK------QAIADVL 56 (257)
T ss_dssp HHHHHHHHHT--TCEEEEEESSSSSE------------------------EC-----C-TTSHHHHH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCchhh------------------------cc-----c-cccCCCCH------HHHHHHH
Confidence 3688999988 99999999964321 11 1 56788765 5677776
Q ss_pred c----CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCc--ccccccCCCCCC
Q psy7539 81 E----TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVS 151 (318)
Q Consensus 81 ~----~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~ 151 (318)
+ ++|+|||+||......+++..+++|+.|+.++++++... .+..+||++||..++.... +..+..... .+
T Consensus 57 ~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~-~~ 135 (257)
T 1fjh_A 57 AKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA-GE 135 (257)
T ss_dssp TTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHH-TC
T ss_pred HHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcc-cc
Confidence 5 459999999986534557789999999999999988632 2457999999987763211 000000000 00
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccCCC
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNIN 227 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~~ 227 (318)
.... . ...+...+.+ ....|+.||.+.+.+.+.+.. +|+++++++||.+.++.... ..
T Consensus 136 ~~~~---~-----~~~~~~~~~~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~~ 197 (257)
T 1fjh_A 136 EAKA---R-----AIVEHAGEQG---GNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQA-------GL 197 (257)
T ss_dssp HHHH---H-----HHHHTCCTTH---HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------
T ss_pred hhhh---h-----hhhhcccCCC---CccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchh-------hc
Confidence 0000 0 0000000000 016899999999999987654 58999999999886643211 00
Q ss_pred chHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 228 GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
........... + ......+.+++|+|++++.++..+... ..+..|++.++
T Consensus 198 -~~~~~~~~~~~----~---~~~~~~~~~~~dvA~~~~~l~~~~~~~--~tG~~~~vdgG 247 (257)
T 1fjh_A 198 -QDPRYGESIAK----F---VPPMGRRAEPSEMASVIAFLMSPAASY--VHGAQIVIDGG 247 (257)
T ss_dssp ----------------C---CCSTTSCCCTHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred -cchhHHHHHHh----c---ccccCCCCCHHHHHHHHHHHhCchhcC--CcCCEEEECCC
Confidence 00000000000 0 111124789999999999998765321 24788888877
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.3e-13 Score=118.58 Aligned_cols=205 Identities=14% Similarity=0.054 Sum_probs=138.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... +.+.+.+ .....++.++.+|++++ +++..++
T Consensus 46 ~aia~~la~~--G~~V~~~~r~~~~~---~~~~~~~--------------~~~~~~~~~~~~Dl~d~------~~v~~~~ 100 (276)
T 3r1i_A 46 KKVALAYAEA--GAQVAVAARHSDAL---QVVADEI--------------AGVGGKALPIRCDVTQP------DQVRGML 100 (276)
T ss_dssp HHHHHHHHHT--TCEEEEEESSGGGG---HHHHHHH--------------HHTTCCCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHHH---HHHHHHH--------------HhcCCeEEEEEcCCCCH------HHHHHHH
Confidence 3688999998 99999999964322 2222111 22235788999999986 5677666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... +...++|++||..+.....
T Consensus 101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~--- 177 (276)
T 3r1i_A 101 DQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI--- 177 (276)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC---
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC---
Confidence 5 79999999997532 2345568899999999999887642 1135799999977643210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+.+. ..|+.||.+.+.+.+.++. +|+++.+++||.|..+....
T Consensus 178 ----~~~~-----------------------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~ 224 (276)
T 3r1i_A 178 ----PQQV-----------------------------SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP 224 (276)
T ss_dssp ----SSCC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG
T ss_pred ----CCCc-----------------------------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc
Confidence 0111 6899999999999887765 58999999999886533211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ......+... ....-+...+|+|++++.++...... ..+.++++.++
T Consensus 225 -------~---~~~~~~~~~~---------~p~~r~~~pedvA~~v~fL~s~~~~~--itG~~i~vdGG 272 (276)
T 3r1i_A 225 -------L---ADYHALWEPK---------IPLGRMGRPEELTGLYLYLASAASSY--MTGSDIVIDGG 272 (276)
T ss_dssp -------G---GGGHHHHGGG---------STTSSCBCGGGSHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -------c---hHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCccccC--ccCcEEEECcC
Confidence 0 0111111111 11234778899999999988764431 24889999887
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.7e-13 Score=117.59 Aligned_cols=203 Identities=12% Similarity=0.103 Sum_probs=135.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... ...+.++.+|++++ +++..++
T Consensus 28 ~aia~~l~~~--G~~V~~~~r~~~~~---------------------------~~~~~~~~~Dv~~~------~~v~~~~ 72 (269)
T 3vtz_A 28 LAVVDALVRY--GAKVVSVSLDEKSD---------------------------VNVSDHFKIDVTNE------EEVKEAV 72 (269)
T ss_dssp HHHHHHHHHT--TCEEEEEESCC--C---------------------------TTSSEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCchhc---------------------------cCceeEEEecCCCH------HHHHHHH
Confidence 3688999998 99999999964322 12567889999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 73 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 147 (269)
T 3vtz_A 73 EKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT----- 147 (269)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----
Confidence 4 78999999997532 1335568899999999999886542 245699999998775421
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.. ...|+.||.+.+.+.+.++. .++++.+++||.|.++......
T Consensus 148 ----~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~ 194 (269)
T 3vtz_A 148 ----KN-----------------------------AAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAA 194 (269)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHH
T ss_pred ----CC-----------------------------ChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhh
Confidence 01 17899999999999988766 3789999999988653210000
Q ss_pred Ccc--cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWT--DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ............+.. ......+.+++|+|++++.++...... ..+.++++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~~--itG~~i~vdGG 252 (269)
T 3vtz_A 195 KMEVGEDENAVERKIEEWGR---------QHPMGRIGRPEEVAEVVAFLASDRSSF--ITGACLTVDGG 252 (269)
T ss_dssp HHHHCCSTTHHHHHHHHHHH---------HSTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred hccccccchhhHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCCccCC--CcCcEEEECCC
Confidence 000 000000011111111 112345789999999999988765431 24889999988
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.51 E-value=8.6e-14 Score=120.92 Aligned_cols=206 Identities=9% Similarity=-0.002 Sum_probs=136.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 40 ~aia~~la~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 94 (271)
T 4ibo_A 40 RAMAEGLAVA--GARILINGTDPS---RVAQTVQEF--------------RNVGHDAEAVAFDVTSE------SEIIEAF 94 (271)
T ss_dssp HHHHHHHHHT--TCEEEECCSCHH---HHHHHHHHH--------------HHTTCCEEECCCCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCceEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999988521 111111111 22235789999999986 5676666
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 95 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~----- 169 (271)
T 4ibo_A 95 ARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR----- 169 (271)
T ss_dssp HHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----
T ss_pred HHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC-----
Confidence 5 78999999997521 2345678999999999998876542 244689999997654321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.++. +|+++..++||.|.++...
T Consensus 170 ----~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-- 214 (271)
T 4ibo_A 170 ----AT-----------------------------VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ-- 214 (271)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH--
T ss_pred ----CC-----------------------------chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh--
Confidence 01 17899999999999887754 5899999999988653211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.......+...+... .....+...+|+|++++.++...... ..++++++.++
T Consensus 215 -----~~~~~~~~~~~~~~~---------~p~~r~~~pedva~~v~~L~s~~~~~--itG~~i~vdGG 266 (271)
T 4ibo_A 215 -----ALIDNPEFDAWVKAR---------TPAKRWGKPQELVGTAVFLSASASDY--VNGQIIYVDGG 266 (271)
T ss_dssp -----HHHHCHHHHHHHHHH---------STTCSCBCGGGGHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hcccCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccccC--CCCcEEEECCC
Confidence 000001111111111 11234677899999999888754431 24889999888
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.4e-13 Score=112.66 Aligned_cols=175 Identities=15% Similarity=0.056 Sum_probs=116.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++.+.. . ...++.++.+|++++ +++..++
T Consensus 19 ~~~a~~l~~~--G~~V~~~~r~~~------~~~~~~--------------~-~~~~~~~~~~D~~~~------~~~~~~~ 69 (234)
T 2ehd_A 19 EATARLLHAK--GYRVGLMARDEK------RLQALA--------------A-ELEGALPLPGDVREE------GDWARAV 69 (234)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHH--------------H-HSTTCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH------HHHHHH--------------H-HhhhceEEEecCCCH------HHHHHHH
Confidence 3688999988 999999999521 222111 1 112688999999986 5666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++.+ ++ .+..+||++||..++...
T Consensus 70 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~---- 144 (234)
T 2ehd_A 70 AAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLR-RGGGTIVNVGSLAGKNPF---- 144 (234)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-TTCEEEEEECCTTTTSCC----
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCcEEEEECCchhcCCC----
Confidence 4 78999999997432 2345678999999997665544 44 357899999998764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+. ..|+.||.+.+.+.+.+.. .|++++++|||.+.....
T Consensus 145 -----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-- 188 (234)
T 2ehd_A 145 -----KGG-----------------------------AAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFA-- 188 (234)
T ss_dssp -----TTC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------
T ss_pred -----CCC-----------------------------chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcc--
Confidence 111 7899999999988776653 589999999997744211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
.. .... ..+++.+|+|++++.++..+.
T Consensus 189 ---------~~----------~~~~--------~~~~~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 189 ---------GN----------TPGQ--------AWKLKPEDVAQAVLFALEMPG 215 (234)
T ss_dssp ------------------------------------CCHHHHHHHHHHHHHSCC
T ss_pred ---------cc----------cccc--------cCCCCHHHHHHHHHHHhCCCc
Confidence 00 0000 115799999999999987654
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-12 Score=113.45 Aligned_cols=207 Identities=12% Similarity=0.047 Sum_probs=134.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ . .....++.++.+|++++ +++..++
T Consensus 35 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~l--------~-----~~~~~~~~~~~~Dl~~~------~~v~~~~ 90 (267)
T 1vl8_A 35 FGIAQGLAEA--GCSVVVASRNLE---EASEAAQKL--------T-----EKYGVETMAFRCDVSNY------EEVKKLL 90 (267)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------H-----HHHCCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------H-----HhcCCeEEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999532 111111110 0 01134688899999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccc-cccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAY-CHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~-~~~~~~~~~ 142 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||.. +....
T Consensus 91 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---- 166 (267)
T 1vl8_A 91 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM---- 166 (267)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS----
T ss_pred HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCC----
Confidence 4 78999999997532 1345678899999999998877431 2567999999976 32110
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+. ..|+.||.+.+.+.+.+.. +|+++++++||.+.++...
T Consensus 167 -----~~~-----------------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~- 211 (267)
T 1vl8_A 167 -----PNI-----------------------------SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE- 211 (267)
T ss_dssp -----SSC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH-
T ss_pred -----CCC-----------------------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc-
Confidence 011 6899999999999887654 5899999999988553210
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...........+.... ....+++.+|+|++++.++...... ..+..+++.++
T Consensus 212 ------~~~~~~~~~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s~~~~~--itG~~i~vdGG 263 (267)
T 1vl8_A 212 ------AVFSDPEKLDYMLKRI---------PLGRTGVPEDLKGVAVFLASEEAKY--VTGQIIFVDGG 263 (267)
T ss_dssp ------HHHTCHHHHHHHHHTC---------TTSSCBCGGGGHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------ccccChHHHHHHHhhC---------CCCCCcCHHHHHHHHHHHcCccccC--CcCCeEEECCC
Confidence 0000011111111110 1124788999999999988764321 24788888776
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=5.4e-13 Score=116.39 Aligned_cols=211 Identities=13% Similarity=0.089 Sum_probs=136.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+.. . .....++.++.+|++++ +++..++
T Consensus 20 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~~--------~---~~~~~~~~~~~~Dv~~~------~~v~~~~ 77 (280)
T 1xkq_A 20 RTTAILFAQE--GANVTITGRSSE---RLEETRQIILK--------S---GVSEKQVNSVVADVTTE------DGQDQII 77 (280)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHHT--------T---TCCGGGEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHHH--------c---CCCCcceEEEEecCCCH------HHHHHHH
Confidence 3688999998 999999999532 11111111110 0 00012788999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCc
Q psy7539 81 E-------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~ 139 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+ .+||++||..++...
T Consensus 78 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~- 155 (280)
T 1xkq_A 78 NSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA- 155 (280)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC-
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC-
Confidence 4 68999999996422 1235678999999999999988642 13 799999997764321
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
.++. ..|+.||.+.+.+.+.+.. +|+++.+++||.+.++.
T Consensus 156 -------~~~~-----------------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (280)
T 1xkq_A 156 -------QPDF-----------------------------LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 199 (280)
T ss_dssp -------CCSS-----------------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred -------CCcc-----------------------------cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence 0111 6899999999999887753 58999999999987643
Q ss_pred CCCCCCcccCCCch-----HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc-cCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGP-----TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF-LSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~-~~~~~~~~~~~ni~~~ 287 (318)
.... ..... ..+...+... .....+.+.+|+|++++.++... ... ..+..+++.++
T Consensus 200 ~~~~-----~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~pedvA~~v~~l~s~~~~~~--~tG~~i~vdgG 261 (280)
T 1xkq_A 200 TNAM-----GMPDQASQKFYNFMASHKEC---------IPIGAAGKPEHIANIILFLADRNLSFY--ILGQSIVADGG 261 (280)
T ss_dssp HHHT-----TCCHHHHHHHHHHHHHCTTT---------CTTSSCBCHHHHHHHHHHHHCHHHHTT--CCSCEEEESTT
T ss_pred cccc-----ccccccccchHHHHHHHHcC---------CCCCCCCCHHHHHHHHHHhcCcccccC--ccCCeEEECCC
Confidence 1100 00000 0111111111 11235889999999999988764 221 14789999887
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.51 E-value=4.8e-13 Score=114.31 Aligned_cols=199 Identities=11% Similarity=0.055 Sum_probs=135.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ .+.+|++..|..... ..++.++.+|++++ +++..++
T Consensus 18 ~~~a~~l~~~-~g~~v~~~~~~~~~~---------------------------~~~~~~~~~Dv~~~------~~v~~~~ 63 (244)
T 4e4y_A 18 KAVVELLLQN-KNHTVINIDIQQSFS---------------------------AENLKFIKADLTKQ------QDITNVL 63 (244)
T ss_dssp HHHHHHHTTS-TTEEEEEEESSCCCC---------------------------CTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHhc-CCcEEEEeccccccc---------------------------cccceEEecCcCCH------HHHHHHH
Confidence 3678899883 378999888864321 24678999999986 5677666
Q ss_pred c-----CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcCCC--ccEEEEeccccccCCcccccccC
Q psy7539 81 E-----TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHL--QLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 81 ~-----~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~--~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... -. .++|++||..++....
T Consensus 64 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~-~~~~g~iv~~sS~~~~~~~~------- 135 (244)
T 4e4y_A 64 DIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENN-LKVGASIVFNGSDQCFIAKP------- 135 (244)
T ss_dssp HHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGG-EEEEEEEEEECCGGGTCCCT-------
T ss_pred HHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH-hccCcEEEEECCHHHccCCC-------
Confidence 5 78999999997421 2345678999999999999998763 22 3899999977653210
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCc
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
+ ...|+.||.+.+.+.+.+.. +|+++.+++||.|.++..
T Consensus 136 --~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~------ 178 (244)
T 4e4y_A 136 --N-----------------------------SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLY------ 178 (244)
T ss_dssp --T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHH------
T ss_pred --C-----------------------------CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhh------
Confidence 0 16899999999999887764 589999999998855311
Q ss_pred ccCCCchHHHHHHHhc--Cc----eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 TDNINGPTGLLIGAGK--GI----IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..+...... +. .............+.+.+|+|++++.++...... ..++++++.++
T Consensus 179 -------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~--itG~~i~vdGG 240 (244)
T 4e4y_A 179 -------RNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKF--MTGGLIPIDGG 240 (244)
T ss_dssp -------HHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -------HHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCcccc--ccCCeEeECCC
Confidence 011000000 00 0000011222345889999999999998765431 24789999877
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-12 Score=114.32 Aligned_cols=219 Identities=10% Similarity=0.010 Sum_probs=139.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC-------CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK-------NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISA 73 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~-------~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~ 73 (318)
++++++|+++ |++|+++.|..... ...+++.+... .+ .....++.++.+|+++.
T Consensus 25 ~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~D~~~~------ 85 (277)
T 3tsc_A 25 RAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVR-----LV------EAANRRIVAAVVDTRDF------ 85 (277)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHH-----HH------HHTTCCEEEEECCTTCH------
T ss_pred HHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHH-----HH------HhcCCeEEEEECCCCCH------
Confidence 3688999998 99999999853211 11233332211 00 22245789999999986
Q ss_pred HHHHHHhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccc
Q psy7539 74 EDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCH 135 (318)
Q Consensus 74 ~~~~~~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~ 135 (318)
+++..+++ ++|++||+||.... ...++..+++|+.|+.++++++... +...+||++||..++
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 165 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM 165 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence 56666554 68999999997532 2345678999999999999886532 124589999997764
Q ss_pred cCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 136 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
.... . ...|+.||.+.+.+.+.++. +|+++..++||.|
T Consensus 166 ~~~~---------~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v 207 (277)
T 3tsc_A 166 KMQP---------F-----------------------------MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPV 207 (277)
T ss_dssp SCCS---------S-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred CCCC---------C-----------------------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCC
Confidence 3210 0 16899999999999887765 5899999999988
Q ss_pred ccccCCCCCCcccCCCchHHHHHHHhcCcee-eEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 212 IPIWKDPLPGWTDNINGPTGLLIGAGKGIIR-TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 212 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..+.... ................ ... ....+.-+.+.+|+|++++.++...... ..+.++++.++
T Consensus 208 ~T~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~p~r~~~pedvA~~v~~L~s~~~~~--itG~~i~vdGG 273 (277)
T 3tsc_A 208 NTPMGSG--------DMVTAVGQAMETNPQLSHVL-TPFLPDWVAEPEDIADTVCWLASDESRK--VTAAQIPVDQG 273 (277)
T ss_dssp SSGGGSH--------HHHHHHHHHHHTCGGGTTTT-CCSSSCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred cCCcccc--------hhhhhhhhcccccHHHHHHh-hhccCCCCCCHHHHHHHHHHHhCccccC--CcCCEEeeCCC
Confidence 6532110 0000111111111000 000 1111224889999999999998765431 24889999887
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.2e-12 Score=112.45 Aligned_cols=209 Identities=11% Similarity=0.075 Sum_probs=135.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++..++.|++..|+.. ++++.. .....++.++.+|++++ +++..++
T Consensus 16 ~aia~~l~~~g~~~~v~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 69 (254)
T 3kzv_A 16 KSIVDVLFSLDKDTVVYGVARSEA------PLKKLK--------------EKYGDRFFYVVGDITED------SVLKQLV 69 (254)
T ss_dssp HHHHHHHHHHCSSCEEEEEESCHH------HHHHHH--------------HHHGGGEEEEESCTTSH------HHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEecCCHH------HHHHHH--------------HHhCCceEEEECCCCCH------HHHHHHH
Confidence 368899998833578998888521 222211 12235789999999986 5666665
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++ ++. + .++|++||..+....
T Consensus 70 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~-g~iv~isS~~~~~~~--- 144 (254)
T 3kzv_A 70 NAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-N-GNVVFVSSDACNMYF--- 144 (254)
T ss_dssp HHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCSCCCCSS---
T ss_pred HHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CeEEEEcCchhccCC---
Confidence 4 78999999997422 1345678999999999999988 332 3 689999997764321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccccccCCCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.++. .++++..++||.+..+.....
T Consensus 145 ------~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~ 189 (254)
T 3kzv_A 145 ------SS-----------------------------WGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNI 189 (254)
T ss_dssp ------CC-----------------------------SHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCC
T ss_pred ------CC-----------------------------cchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHh
Confidence 01 17899999999999988876 589999999999977543322
Q ss_pred CCccc-CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc-CCCCCCCcEEEeeCC
Q psy7539 220 PGWTD-NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL-SNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~-~~~~~~~~~~ni~~~ 287 (318)
..... .... ......+... .....+.+.+|+|++++.++.... .. ..++.+++.++
T Consensus 190 ~~~~~~~~~~-~~~~~~~~~~---------~~~~r~~~p~dva~~v~~L~s~~~~~~--itG~~i~vdg~ 247 (254)
T 3kzv_A 190 RENVGPSSMS-AEQLKMFRGL---------KENNQLLDSSVPATVYAKLALHGIPDG--VNGQYLSYNDP 247 (254)
T ss_dssp CCCCCTTTSC-HHHHHHHHHH---------HTTC----CHHHHHHHHHHHHHCCCGG--GTTCEEETTCG
T ss_pred hcccCccccC-HHHHHHHHHH---------HhcCCcCCcccHHHHHHHHHhhcccCC--CCccEEEecCc
Confidence 11000 0001 1122222111 012347789999999999887652 10 14788888776
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.2e-13 Score=120.33 Aligned_cols=208 Identities=15% Similarity=0.112 Sum_probs=137.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+...++ . .....++.++.+|++++ +++..++
T Consensus 41 ~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~-~-------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 96 (277)
T 4fc7_A 41 FRIAEIFMRH--GCHTVIASRSLPR--VLTAARKL-A-------------GATGRRCLPLSMDVRAP------PAVMAAV 96 (277)
T ss_dssp HHHHHHHHTT--TCEEEEEESCHHH--HHHHHHHH-H-------------HHHSSCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHH-H-------------HhcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999988 9999999995321 11111111 0 11235789999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 97 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 171 (277)
T 4fc7_A 97 DQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ----- 171 (277)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC-----
T ss_pred HHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----
Confidence 4 78999999996421 2345678999999999999987531 134689999997664321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
. ....|+.||.+.+.+.+.++. +|+++.+++||.|.+....
T Consensus 172 ----~-----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~-- 216 (277)
T 4fc7_A 172 ----A-----------------------------LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGL-- 216 (277)
T ss_dssp ----T-----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHH--
T ss_pred ----C-----------------------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhh--
Confidence 0 016899999999998887765 5899999999988653110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
................ ....-+...+|+|++++.++...... ..+.++++.++
T Consensus 217 ----~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~fL~s~~~~~--itG~~i~vdGG 269 (277)
T 4fc7_A 217 ----RRLGGPQASLSTKVTA---------SPLQRLGNKTEIAHSVLYLASPLASY--VTGAVLVADGG 269 (277)
T ss_dssp ----HHHSCCHHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ----hhccCCHHHHHHHhcc---------CCCCCCcCHHHHHHHHHHHcCCccCC--cCCCEEEECCC
Confidence 0000111222222221 11234778999999999988754421 24889999887
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=9.6e-13 Score=114.97 Aligned_cols=217 Identities=15% Similarity=0.047 Sum_probs=138.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+.+.+.+ .....++.++.+|+++. +++..++
T Consensus 43 ~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 98 (283)
T 1g0o_A 43 REMAMELGRR--GCKVIVNYANSTE--SAEEVVAAI--------------KKNGSDAACVKANVGVV------EDIVRMF 98 (283)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCchH--HHHHHHHHH--------------HHhCCCeEEEEcCCCCH------HHHHHHH
Confidence 3688999998 9999999996321 111111111 11234788999999976 4555544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 99 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------- 171 (283)
T 1g0o_A 99 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA------- 171 (283)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS-------
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC-------
Confidence 3 78999999997532 2345678999999999999998863 245699999997664321
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC-C
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL-P 220 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~-~ 220 (318)
+.+. ..|+.||.+.+.+.+.+.. +|+++.+++||.+.++..... .
T Consensus 172 -~~~~-----------------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~ 221 (283)
T 1g0o_A 172 -VPKH-----------------------------AVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCR 221 (283)
T ss_dssp -CSSC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGG
T ss_pred -CCCC-----------------------------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhh
Confidence 0001 6899999999999887754 589999999998876421100 0
Q ss_pred CcccCC-CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNI-NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+.... .........+.... ......+.+.+|+|++++.++...... ..+.++++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-------~~p~~r~~~p~dvA~~v~~l~s~~~~~--itG~~i~vdgG 280 (283)
T 1g0o_A 222 EYIPNGENLSNEEVDEYAAVQ-------WSPLRRVGLPIDIARVVCFLASNDGGW--VTGKVIGIDGG 280 (283)
T ss_dssp GGSTTCTTCCHHHHHHHHHHH-------SCTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred hccccccccCHHHHHHHHhhc-------CCCCCCCcCHHHHHHHHHHHhCccccC--cCCCEEEeCCC
Confidence 000000 00011111111100 001224789999999999998765421 24788888876
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.49 E-value=6.8e-13 Score=113.96 Aligned_cols=203 Identities=12% Similarity=0.019 Sum_probs=132.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccC--CCCCCCCCHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV--AVPDLGISAEDRQM 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl--~~~~~gl~~~~~~~ 78 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .....++.++.+|+ ++. +++..
T Consensus 26 ~aia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~~~D~~~~~~------~~~~~ 81 (252)
T 3f1l_A 26 REAAMTYARY--GATVILLGRNEE---KLRQVASHIN-------------EETGRQPQWFILDLLTCTS------ENCQQ 81 (252)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH-------------HHHSCCCEEEECCTTTCCH------HHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHH-------------hhcCCCceEEEEecccCCH------HHHHH
Confidence 3688999998 999999999532 1112211111 11223788999999 554 55655
Q ss_pred Hhc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcc
Q psy7539 79 LSE-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 79 ~~~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~ 140 (318)
+++ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-- 159 (252)
T 3f1l_A 82 LAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR-- 159 (252)
T ss_dssp HHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC--
T ss_pred HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC--
Confidence 554 78999999997421 1335678999999999999988421 255799999997764321
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~ 217 (318)
.. ...|+.||.+.+.+.+.++. ..+++..+.||.+..+
T Consensus 160 -------~~-----------------------------~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~--- 200 (252)
T 3f1l_A 160 -------AN-----------------------------WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA--- 200 (252)
T ss_dssp -------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH---
T ss_pred -------CC-----------------------------CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc---
Confidence 00 16899999999999988776 2388888998866321
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHH
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 295 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~ 295 (318)
+...... ......+...+|+|.+++.++...... ..+..+++.++ ...++.
T Consensus 201 --------------~~~~~~~---------~~~~~~~~~p~dva~~~~~L~s~~~~~--itG~~i~vdgG--~~~~~~ 251 (252)
T 3f1l_A 201 --------------MRASAFP---------TEDPQKLKTPADIMPLYLWLMGDDSRR--KTGMTFDAQPG--RKPGIS 251 (252)
T ss_dssp --------------HHHHHCT---------TCCGGGSBCTGGGHHHHHHHHSGGGTT--CCSCEEESSCC--------
T ss_pred --------------hhhhhCC---------ccchhccCCHHHHHHHHHHHcCccccC--CCCCEEEeCCC--cCCCCC
Confidence 1111111 111234678899999999988765431 24889999988 555543
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=4.6e-13 Score=118.08 Aligned_cols=212 Identities=12% Similarity=0.036 Sum_probs=136.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .... ......++.++.+|++++ +++..++
T Consensus 32 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~l--------~~~~-~~~~~~~~~~~~~D~~~~------~~v~~~~ 91 (303)
T 1yxm_A 32 KAIVKELLEL--GSNVVIASRKLE---RLKSAADEL--------QANL-PPTKQARVIPIQCNIRNE------EEVNNLV 91 (303)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------HHTS-CTTCCCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------Hhhc-cccCCccEEEEecCCCCH------HHHHHHH
Confidence 3688999998 999999999532 111111111 0000 001235789999999986 5676665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||....+.
T Consensus 92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------ 165 (303)
T 1yxm_A 92 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF------ 165 (303)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCC------
Confidence 4 59999999996421 2335568999999999999997652 13468999999762211
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
+. ...|+.+|.+.+.+...+.. .|++++++|||.++|+....
T Consensus 166 ----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~- 211 (303)
T 1yxm_A 166 ----PL-----------------------------AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVE- 211 (303)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGT-
T ss_pred ----Cc-----------------------------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhh-
Confidence 00 16899999999988887665 48999999999998863110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..... .......... ......+++++|+|++++.++...... ..+..+++.++
T Consensus 212 -----~~~~~---~~~~~~~~~~-----~~p~~~~~~~~dvA~~i~~l~~~~~~~--~~G~~~~v~gG 264 (303)
T 1yxm_A 212 -----NYGSW---GQSFFEGSFQ-----KIPAKRIGVPEEVSSVVCFLLSPAASF--ITGQSVDVDGG 264 (303)
T ss_dssp -----TSGGG---GGGGGTTGGG-----GSTTSSCBCTHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hcccc---chHHHHHHHh-----cCcccCCCCHHHHHHHHHHHhCccccc--CCCcEEEECCC
Confidence 00000 0000010000 011134789999999999998654321 24789999888
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.49 E-value=6e-13 Score=114.93 Aligned_cols=184 Identities=10% Similarity=0.047 Sum_probs=122.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 43 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~v~~~~ 97 (262)
T 3rkr_A 43 AAIARKLGSL--GARVVLTARDVE---KLRAVEREI--------------VAAGGEAESHACDLSHS------DAIAAFA 97 (262)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HHTTCEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHH--------------HHhCCceeEEEecCCCH------HHHHHHH
Confidence 3688999998 999999999532 111111111 12235789999999986 5666555
Q ss_pred c-------CccEEEEcccccC--------cchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVR--------FDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|+|||+||... ....+...+++|+.|+.++++++... .+..+||++||..++...
T Consensus 98 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 173 (262)
T 3rkr_A 98 TGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV---- 173 (262)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC----
T ss_pred HHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC----
Confidence 4 5899999999721 12345678999999999999886531 256799999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+ ...|+.||.+.+.+.+.+.. .|+++.+++||.|......
T Consensus 174 -----~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~- 218 (262)
T 3rkr_A 174 -----AD-----------------------------GAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV- 218 (262)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred -----CC-----------------------------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc-
Confidence 01 17899999999998877664 5899999999977442110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
.. . .......++..+|+|++++.++.....
T Consensus 219 ------~~----------~---------~~~~~~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 219 ------GL----------S---------AKKSALGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp -----------------------------------CCCHHHHHHHHHHHHTCCTT
T ss_pred ------cc----------c---------cccccccCCCHHHHHHHHHHHhcCccc
Confidence 00 0 011223467899999999998876543
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-12 Score=112.48 Aligned_cols=188 Identities=13% Similarity=0.100 Sum_probs=128.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. ++++ .....++.++.+|+++. +++..++
T Consensus 30 ~aia~~l~~~--G~~V~~~~r~~------~~~~-----------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 78 (266)
T 3p19_A 30 EAIARRFSEE--GHPLLLLARRV------ERLK-----------------ALNLPNTLCAQVDVTDK------YTFDTAI 78 (266)
T ss_dssp HHHHHHHHHT--TCCEEEEESCH------HHHH-----------------TTCCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHH-----------------HhhcCCceEEEecCCCH------HHHHHHH
Confidence 3688999998 99999999952 1222 11224788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 79 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----- 153 (266)
T 3p19_A 79 TRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF----- 153 (266)
T ss_dssp HHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----
T ss_pred HHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC-----
Confidence 4 78999999997522 2345678999999999977766421 256799999998765321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++...
T Consensus 154 ----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~-- 198 (266)
T 3p19_A 154 ----PD-----------------------------HAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLS-- 198 (266)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGG--
T ss_pred ----CC-----------------------------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhh--
Confidence 00 16899999999988877655 5899999999998764321
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
.... ........... . ....+++++|+|++++.++..+..
T Consensus 199 -----~~~~-~~~~~~~~~~~---~-----~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 199 -----HTTS-QQIKDGYDAWR---V-----DMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp -----GCSC-HHHHHHHHHHH---H-----HTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred -----cccc-hhhhHHHHhhc---c-----cccCCCCHHHHHHHHHHHHcCCCC
Confidence 1111 11111111100 0 122478999999999999988654
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.1e-12 Score=109.56 Aligned_cols=185 Identities=17% Similarity=0.149 Sum_probs=127.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.. ++++... .+. .....++.++.+|++++ +++..++
T Consensus 16 ~~ia~~l~~~--G~~V~~~~r~~~------~~~~~~~-----~~~-----~~~~~~~~~~~~D~~~~------~~v~~~~ 71 (235)
T 3l77_A 16 EAIARALARD--GYALALGARSVD------RLEKIAH-----ELM-----QEQGVEVFYHHLDVSKA------ESVEEFS 71 (235)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHHH-----HHH-----HHHCCCEEEEECCTTCH------HHHHHHC
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHHHH-----HHH-----hhcCCeEEEEEeccCCH------HHHHHHH
Confidence 3688999998 999999999532 2221110 000 12245889999999987 5777766
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|++||+||.... ...+...+++|+.|+.++++++... .+..++|++||.......
T Consensus 72 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~------ 145 (235)
T 3l77_A 72 KKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI------ 145 (235)
T ss_dssp C-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC------
T ss_pred HHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC------
Confidence 5 78999999997532 2345678999999999999988642 123567777775543210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccccccCCCCCCc
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
| ....|+.||.+.+.+.+.+.. .++++.+++||.+-.......
T Consensus 146 ----~----------------------------~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~--- 190 (235)
T 3l77_A 146 ----P----------------------------YGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK--- 190 (235)
T ss_dssp ----T----------------------------TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC---
T ss_pred ----C----------------------------CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc---
Confidence 0 016899999999999988743 689999999997744221100
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
. .......++..+|+|++++.++..+..
T Consensus 191 ----~-------------------~~~~~~~~~~p~dva~~v~~l~~~~~~ 218 (235)
T 3l77_A 191 ----P-------------------GKPKEKGYLKPDEIAEAVRCLLKLPKD 218 (235)
T ss_dssp ----S-------------------CCCGGGTCBCHHHHHHHHHHHHTSCTT
T ss_pred ----C-------------------CcccccCCCCHHHHHHHHHHHHcCCCC
Confidence 0 011122578899999999999987664
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=2.4e-12 Score=110.29 Aligned_cols=200 Identities=13% Similarity=0.094 Sum_probs=130.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++.+.. .+...++.++.+|++++ +++..++
T Consensus 14 ~aia~~l~~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 65 (248)
T 3asu_A 14 ECITRRFIQQ--GHKVIATGRRQ------ERLQELK--------------DELGDNLYIAQLDVRNR------AAIEEML 65 (248)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HHHCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHH--------------HHhcCceEEEEcCCCCH------HHHHHHH
Confidence 3688999998 99999999952 1222211 11224788999999986 5777776
Q ss_pred c-------CccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||... + ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 66 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---- 141 (248)
T 3asu_A 66 ASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY---- 141 (248)
T ss_dssp HTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----
T ss_pred HHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC----
Confidence 5 6899999999642 1 1345678999999999988887621 255799999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc-ccCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP-IWKD 217 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G-~~~~ 217 (318)
.+ ...|+.||.+.+.+.+.+.. .|+++.+++||.+.| +...
T Consensus 142 -----~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~ 187 (248)
T 3asu_A 142 -----AG-----------------------------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN 187 (248)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----
T ss_pred -----CC-----------------------------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchh
Confidence 01 16899999999999887654 589999999998874 2110
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ...+..... . ... ....++..+|+|++++.++..... ..+..+.+...
T Consensus 188 ~------~~~~~~~~~----~----~~~----~~~~~~~p~dvA~~v~~l~s~~~~---~~g~~i~v~~~ 236 (248)
T 3asu_A 188 V------RFKGDDGKA----E----KTY----QNTVALTPEDVSEAVWWVSTLPAH---VNINTLEMMPV 236 (248)
T ss_dssp -----------------------------------CCBCHHHHHHHHHHHHHSCTT---CCCCEEEECCT
T ss_pred h------cccCchHHH----H----HHH----hccCCCCHHHHHHHHHHHhcCCcc---ceeeEEEEccc
Confidence 0 000000000 0 000 011236899999999999876433 23666666544
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=5.1e-13 Score=113.53 Aligned_cols=187 Identities=12% Similarity=0.125 Sum_probs=127.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... . ....++.+|++++ +++..++
T Consensus 17 ~~~a~~l~~~--G~~V~~~~r~~~~~------------------------~---~~~~~~~~D~~~~------~~~~~~~ 61 (236)
T 1ooe_A 17 SAILEFFKKN--GYTVLNIDLSANDQ------------------------A---DSNILVDGNKNWT------EQEQSIL 61 (236)
T ss_dssp HHHHHHHHHT--TEEEEEEESSCCTT------------------------S---SEEEECCTTSCHH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEecCcccc------------------------c---cccEEEeCCCCCH------HHHHHHH
Confidence 3688999998 99999999975432 1 2356788999876 4565554
Q ss_pred c---------CccEEEEcccccC-----c---chhHHHHHHHhHHHHHHHHHHHHhcC-CCccEEEEeccccccCCcccc
Q psy7539 81 E---------TIHIVYHIAATVR-----F---DDYMQTYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~---------~~d~Vih~Aa~~~-----~---~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||... . ...++..+++|+.|+.++++++...- ...+||++||..++...
T Consensus 62 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---- 137 (236)
T 1ooe_A 62 EQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT---- 137 (236)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----
T ss_pred HHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC----
Confidence 3 7999999999642 1 13345689999999999999987631 12489999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-c-----CCcEEEecccccccccC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-A-----GMPCMILRPSIIIPIWK 216 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~-----~~~~~ilR~~~v~G~~~ 216 (318)
.+. ..|+.||.+.+.+.+.+.. . |+++++++||.+.++.
T Consensus 138 -----~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~- 182 (236)
T 1ooe_A 138 -----PSM-----------------------------IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM- 182 (236)
T ss_dssp -----TTB-----------------------------HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-
T ss_pred -----CCc-----------------------------HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc-
Confidence 011 6899999999999988765 2 5899999999775421
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....... .....+++.+|+|++++.++..+... ...+..+++.++
T Consensus 183 ----------------~~~~~~~---------~~~~~~~~~~dvA~~i~~~l~s~~~~-~~~G~~~~v~gg 227 (236)
T 1ooe_A 183 ----------------NRKWMPN---------ADHSSWTPLSFISEHLLKWTTETSSR-PSSGALLKITTE 227 (236)
T ss_dssp ----------------HHHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGGGC-CCTTCEEEEEEE
T ss_pred ----------------hhhcCCC---------ccccccCCHHHHHHHHHHHHcCCCcc-cccccEEEEecC
Confidence 0111000 11234577899999998666333221 124778888765
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=2.5e-13 Score=117.96 Aligned_cols=181 Identities=15% Similarity=0.066 Sum_probs=124.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 45 ~~la~~L~~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~Dl~~~------~~v~~~~ 99 (272)
T 1yb1_A 45 RLTAYEFAKL--KSKLVLWDINKH---GLEETAAKC--------------KGLGAKVHTFVVDCSNR------EDIYSSA 99 (272)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEEcCHH---HHHHHHHHH--------------HhcCCeEEEEEeeCCCH------HHHHHHH
Confidence 3688999998 999999999532 111111111 11234789999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++... .+..+||++||..++....
T Consensus 100 ~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---- 175 (272)
T 1yb1_A 100 KKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP---- 175 (272)
T ss_dssp HHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH----
T ss_pred HHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC----
Confidence 4 78999999997532 1234568999999988877766431 3568999999987653210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-------cCCcEEEecccccccccC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-------AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~~~ilR~~~v~G~~~ 216 (318)
. ...|+.||.+.|.+++.+.. .|++++++|||.+.++..
T Consensus 176 ----------------------------~------~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~ 221 (272)
T 1yb1_A 176 ----------------------------F------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI 221 (272)
T ss_dssp ----------------------------H------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST
T ss_pred ----------------------------C------chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcc
Confidence 0 06899999999999887654 279999999998865321
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
. . . . .....+++.+|+|++++.++..+.
T Consensus 222 ~-------~--~-----------~--------~~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 222 K-------N--P-----------S--------TSLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp T-------C--T-----------H--------HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred c-------c--c-----------c--------ccccCCCCHHHHHHHHHHHHHcCC
Confidence 0 0 0 0 012357899999999999997754
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=5e-13 Score=116.46 Aligned_cols=194 Identities=13% Similarity=0.108 Sum_probs=124.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. . .....++.++.+|++++ +++..++
T Consensus 46 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~--------~----~~~~~~~~~~~~Dl~~~------~~v~~~~ 102 (279)
T 1xg5_A 46 AAVARALVQQ--GLKVVGCARTVG---NIEELAAECK--------S----AGYPGTLIPYRCDLSNE------EDILSMF 102 (279)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH--------H----TTCSSEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECChH---HHHHHHHHHH--------h----cCCCceEEEEEecCCCH------HHHHHHH
Confidence 3688999998 999999999532 1111211110 0 01124688999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHH----HHHHHHHHHhcCCC--ccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRG----TRDMLNLSKQMIHL--QLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~g----t~~ll~~a~~~~~~--~~~v~~SS~~~~~~~~~ 140 (318)
+ ++|+|||+||.... ...+...+++|+.| +..+++++++. +. .+||++||..++...
T Consensus 103 ~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~g~iv~isS~~~~~~~-- 179 (279)
T 1xg5_A 103 SAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDDGHIININSMSGHRVL-- 179 (279)
T ss_dssp HHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCSCEEEEECCGGGTSCC--
T ss_pred HHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCceEEEEcChhhcccC--
Confidence 4 79999999997422 23456789999999 77777777774 54 799999998765310
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEecccccccc
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPI 214 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G~ 214 (318)
|... ...|+.||.+.+.+.+.+.. .++++++++||.+.++
T Consensus 180 --------~~~~--------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 225 (279)
T 1xg5_A 180 --------PLSV--------------------------THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ 225 (279)
T ss_dssp --------SCGG--------------------------GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred --------CCCC--------------------------CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccch
Confidence 1100 06899999999988776543 3799999999988553
Q ss_pred cCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 215 WKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 215 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
.... ............ .....+++++|+|++++.++..+.
T Consensus 226 ~~~~------~~~~~~~~~~~~------------~~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 226 FAFK------LHDKDPEKAAAT------------YEQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp HHHH------HTTTCHHHHHHH------------HC---CBCHHHHHHHHHHHHHSCT
T ss_pred hhhh------hcccChhHHhhh------------cccccCCCHHHHHHHHHHHhcCCc
Confidence 2100 000000000000 011247899999999999987643
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-12 Score=113.55 Aligned_cols=200 Identities=14% Similarity=0.080 Sum_probs=136.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++.+.. .+...++.++.+|++++ +++..++
T Consensus 20 ~aia~~l~~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~v~~~~ 71 (263)
T 2a4k_A 20 RAALDLFARE--GASLVAVDREE------RLLAEAV--------------AALEAEAIAVVADVSDP------KAVEAVF 71 (263)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HTCCSSEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHH--------------HHhcCceEEEEcCCCCH------HHHHHHH
Confidence 3688999998 99999999952 2222221 11124788999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcC-CCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ .+|+|||+||.... ...++..+++|+.|+.++++++...- ...+||++||..++ ...
T Consensus 72 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~------ 144 (263)
T 2a4k_A 72 AEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF------ 144 (263)
T ss_dssp HHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH------
T ss_pred HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC------
Confidence 4 57999999997532 13345689999999999999987631 13589999998765 200
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
. ...|+.||.+.+.+.+.... .|+++++++||.+.++...
T Consensus 145 --------------------------~------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---- 188 (263)
T 2a4k_A 145 --------------------------G------LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA---- 188 (263)
T ss_dssp --------------------------H------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT----
T ss_pred --------------------------C------cHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhh----
Confidence 0 06899999988888877654 5899999999998775321
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . ......+.... ....+.+.+|+|++++.++...... ..+..+++.++
T Consensus 189 ---~~-~-~~~~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s~~~~~--~tG~~i~vdgG 238 (263)
T 2a4k_A 189 ---GL-P-PWAWEQEVGAS---------PLGRAGRPEEVAQAALFLLSEESAY--ITGQALYVDGG 238 (263)
T ss_dssp ---TS-C-HHHHHHHHHTS---------TTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ---hc-C-HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccC--CcCCEEEECCC
Confidence 11 1 11112222110 1124789999999999998764321 24788999887
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-12 Score=112.82 Aligned_cols=191 Identities=7% Similarity=-0.033 Sum_probs=120.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... +.+.+.+ .....++.++.+|++++ +++..++
T Consensus 21 ~aia~~l~~~--G~~V~~~~r~~~~~---~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 75 (252)
T 3h7a_A 21 AEIAKKFAAE--GFTVFAGRRNGEKL---APLVAEI--------------EAAGGRIVARSLDARNE------DEVTAFL 75 (252)
T ss_dssp HHHHHHHHHT--TCEEEEEESSGGGG---HHHHHHH--------------HHTTCEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHHH---HHHHHHH--------------HhcCCeEEEEECcCCCH------HHHHHHH
Confidence 3688999998 99999999964322 1121111 12235789999999986 5677666
Q ss_pred c------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 81 E------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+.....
T Consensus 76 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 150 (252)
T 3h7a_A 76 NAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGS----- 150 (252)
T ss_dssp HHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCT-----
T ss_pred HHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCC-----
Confidence 5 68999999997432 2345678999999999988877431 2446899999976643210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcE-EEecccccccccCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC-MILRPSIIIPIWKDPL 219 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~-~ilR~~~v~G~~~~~~ 219 (318)
. ...|+.||.+.+.+.+.+.. .|+++ .++.||.|..+...
T Consensus 151 ----~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~-- 195 (252)
T 3h7a_A 151 ----G-----------------------------FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVR-- 195 (252)
T ss_dssp ----T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------
T ss_pred ----C-----------------------------CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhh--
Confidence 0 17899999999998887765 57888 89999977442211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
... ..... . ........ +...+|+|++++.++..+..
T Consensus 196 -----~~~------~~~~~----~-~~~~~~~~-~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 196 -----ERR------EQMFG----K-DALANPDL-LMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp -----------------------------------CCHHHHHHHHHHHHHCCGG
T ss_pred -----ccc------hhhhh----h-hhhcCCcc-CCCHHHHHHHHHHHHhCchh
Confidence 000 00000 0 01111123 89999999999999986553
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.48 E-value=4.1e-13 Score=117.18 Aligned_cols=200 Identities=11% Similarity=0.047 Sum_probs=135.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++++.. .+...++.++.+|+++. +++..++
T Consensus 44 ~aia~~l~~~--G~~Vi~~~r~~~------~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~v~~~~ 95 (281)
T 3ppi_A 44 EATVRRLHAD--GLGVVIADLAAE------KGKALA--------------DELGNRAEFVSTNVTSE------DSVLAAI 95 (281)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHH--------------HHHCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCChH------HHHHHH--------------HHhCCceEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999522 222211 22235789999999986 5666665
Q ss_pred c------CccEEEEc-ccccCc------------chhHHHHHHHhHHHHHHHHHHHHhc---------CCCccEEEEecc
Q psy7539 81 E------TIHIVYHI-AATVRF------------DDYMQTYVFLNTRGTRDMLNLSKQM---------IHLQLFVYVSTA 132 (318)
Q Consensus 81 ~------~~d~Vih~-Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~---------~~~~~~v~~SS~ 132 (318)
+ ++|++||+ |+.... ...+...+++|+.|+.++++++... .+..+||++||.
T Consensus 96 ~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~ 175 (281)
T 3ppi_A 96 EAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI 175 (281)
T ss_dssp HHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG
T ss_pred HHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc
Confidence 4 68999999 443211 1235678999999999999987632 123489999998
Q ss_pred ccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecc
Q psy7539 133 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRP 208 (318)
Q Consensus 133 ~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~ 208 (318)
.++.... . ...|+.||.+.+.+.+.+.. .|+++.+++|
T Consensus 176 ~~~~~~~---------~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P 217 (281)
T 3ppi_A 176 AGYEGQI---------G-----------------------------QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAP 217 (281)
T ss_dssp GGTSCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred cccCCCC---------C-----------------------------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEec
Confidence 7653210 1 17899999999988877655 5899999999
Q ss_pred cccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 209 SIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 209 ~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
|.|...... .. . ......+.... .....+.+.+|+|++++.++..... .+.++++.++
T Consensus 218 G~v~T~~~~-------~~-~-~~~~~~~~~~~--------~~~~~~~~pedvA~~v~~l~s~~~~----tG~~i~vdGG 275 (281)
T 3ppi_A 218 GTMKTPIME-------SV-G-EEALAKFAANI--------PFPKRLGTPDEFADAAAFLLTNGYI----NGEVMRLDGA 275 (281)
T ss_dssp CSBCCHHHH-------TT-C-HHHHHHHHHTC--------CSSSSCBCHHHHHHHHHHHHHCSSC----CSCEEEESTT
T ss_pred CcCCchhhh-------cc-c-HHHHHHHHhcC--------CCCCCCCCHHHHHHHHHHHHcCCCc----CCcEEEECCC
Confidence 988543211 11 1 12222222221 1114688999999999999976443 5889999887
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=5.2e-13 Score=114.32 Aligned_cols=202 Identities=14% Similarity=0.080 Sum_probs=135.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++++.. .....++.++.+|++++ +++..++
T Consensus 20 ~a~a~~l~~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 71 (247)
T 3rwb_A 20 KAIAARLAAD--GATVIVSDINA------EGAKAAA--------------ASIGKKARAIAADISDP------GSVKALF 71 (247)
T ss_dssp HHHHHHHHHT--TCEEEEECSCH------HHHHHHH--------------HHHCTTEEECCCCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHH--------------HHhCCceEEEEcCCCCH------HHHHHHH
Confidence 3688999998 99999998852 1222211 12235788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLS----KQMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++ ++.+...++|++||..+....
T Consensus 72 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 147 (247)
T 3rwb_A 72 AEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT---- 147 (247)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC----
T ss_pred HHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC----
Confidence 5 79999999997532 2345678999999999998884 332225799999997654321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+. ...|+.||.+.+.+.+.++. +|+++.+++||.|..+....
T Consensus 148 -----~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 193 (247)
T 3rwb_A 148 -----PN-----------------------------MAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKA 193 (247)
T ss_dssp -----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred -----CC-----------------------------chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccc
Confidence 00 17899999999988877654 58999999999886532111
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+ ......+.... .....+...+|+|+++..++...... ..++++++.++
T Consensus 194 ~~------~~~~~~~~~~~-----------~~~~r~~~pedva~~v~~L~s~~~~~--itG~~i~vdGG 243 (247)
T 3rwb_A 194 SP------HNEAFGFVEML-----------QAMKGKGQPEHIADVVSFLASDDARW--ITGQTLNVDAG 243 (247)
T ss_dssp SG------GGGGHHHHHHH-----------SSSCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred cC------hhHHHHHHhcc-----------cccCCCcCHHHHHHHHHHHhCccccC--CCCCEEEECCC
Confidence 00 00000011100 01224578899999999988765431 24889999877
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.7e-13 Score=113.90 Aligned_cols=184 Identities=9% Similarity=0.024 Sum_probs=129.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|+..... -..+.+|+++. +++..++
T Consensus 36 ~~la~~l~~~--G~~V~~~~r~~~~~~-----------------------------~~~~~~d~~d~------~~v~~~~ 78 (251)
T 3orf_A 36 AEVVKFFKSK--SWNTISIDFRENPNA-----------------------------DHSFTIKDSGE------EEIKSVI 78 (251)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCCTTS-----------------------------SEEEECSCSSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCccccc-----------------------------ccceEEEeCCH------HHHHHHH
Confidence 3688999998 999999999754321 12467787765 5666655
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcC-CCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|+|||+||.... ...+...+++|+.|+.++++++...- .-.+||++||..++...
T Consensus 79 ~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------ 152 (251)
T 3orf_A 79 EKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT------ 152 (251)
T ss_dssp HHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------
T ss_pred HHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC------
Confidence 4 57999999996321 23355689999999999999988631 12389999997765321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEecccccccccCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G~~~~~ 218 (318)
.+ ...|+.||.+.+.+.+.++. +++++.+++||.|.++.
T Consensus 153 ---~~-----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~--- 197 (251)
T 3orf_A 153 ---SG-----------------------------MIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT--- 197 (251)
T ss_dssp ---TT-----------------------------BHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH---
T ss_pred ---CC-----------------------------CchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc---
Confidence 00 17899999999999987655 36899999999774421
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhh-ccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN-FLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~-~~~~~~~~~~~~ni~~~ 287 (318)
..... .......+++.+|+|++++.++.. ... ...+..+++.++
T Consensus 198 --------------~~~~~---------~~~~~~~~~~~~dva~~i~~l~~~~~~~--~~tG~~i~v~~g 242 (251)
T 3orf_A 198 --------------NRKYM---------SDANFDDWTPLSEVAEKLFEWSTNSDSR--PTNGSLVKFETK 242 (251)
T ss_dssp --------------HHHHC---------TTSCGGGSBCHHHHHHHHHHHHHCGGGC--CCTTCEEEEEEE
T ss_pred --------------hhhhc---------ccccccccCCHHHHHHHHHHHhcCcccc--CCcceEEEEecC
Confidence 11111 112344678999999999999987 332 124889999876
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-12 Score=111.27 Aligned_cols=193 Identities=10% Similarity=0.060 Sum_probs=130.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... ..+..+.+|++++ +++..++
T Consensus 29 ~~ia~~l~~~--G~~V~~~~r~~~~~----------------------------~~~~~~~~D~~~~------~~~~~~~ 72 (247)
T 1uzm_A 29 LAIAQRLAAD--GHKVAVTHRGSGAP----------------------------KGLFGVEVDVTDS------DAVDRAF 72 (247)
T ss_dssp HHHHHHHHHT--TCEEEEEESSSCCC----------------------------TTSEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCChHHH----------------------------HHhcCeeccCCCH------HHHHHHH
Confidence 3688999988 99999999965432 1222478999876 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 73 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 147 (247)
T 1uzm_A 73 TAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI----- 147 (247)
T ss_dssp HHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC-----
Confidence 4 68999999997532 2345678999999999999887531 256799999997653210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.+.. +|+++.+++||.+.++...
T Consensus 148 ----~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-- 192 (247)
T 1uzm_A 148 ----GN-----------------------------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-- 192 (247)
T ss_dssp -----C-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--
T ss_pred ----CC-----------------------------ChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh--
Confidence 00 16899999999988877654 5899999999987543210
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+ . ......+... . ....+.+.+|+|++++.++...... ..+.++++.++
T Consensus 193 -----~~-~-~~~~~~~~~~----~-----p~~~~~~~~dvA~~~~~l~s~~~~~--~~G~~i~vdgG 242 (247)
T 1uzm_A 193 -----AL-D-ERIQQGALQF----I-----PAKRVGTPAEVAGVVSFLASEDASY--ISGAVIPVDGG 242 (247)
T ss_dssp -----HS-C-HHHHHHHGGG----C-----TTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hc-C-HHHHHHHHhc----C-----CCCCCcCHHHHHHHHHHHcCccccC--CcCCEEEECCC
Confidence 00 0 1111111110 0 1134789999999999988754321 24789999887
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.47 E-value=4.5e-12 Score=109.95 Aligned_cols=215 Identities=14% Similarity=0.056 Sum_probs=137.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ...+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 32 ~aia~~l~~~--G~~V~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 87 (270)
T 3is3_A 32 AAVAVHLGRL--GAKVVVNYANST--KDAEKVVSEI--------------KALGSDAIAIKADIRQV------PEIVKLF 87 (270)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHH--------------HHTTCCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCCH--HHHHHHHHHH--------------HhcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999877532 1122222111 22245789999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... ..-.++|++||..+....
T Consensus 88 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------- 160 (270)
T 3is3_A 88 DQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS------- 160 (270)
T ss_dssp HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC-------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC-------
Confidence 4 78999999997532 2345678999999999999998864 122389999996632110
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC-
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP- 220 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~- 220 (318)
.++ ...|+.||.+.+.+.+.+.. +|+++..++||.+.++......
T Consensus 161 -~~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~ 210 (270)
T 3is3_A 161 -VPK-----------------------------HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSH 210 (270)
T ss_dssp -CTT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGG
T ss_pred -CCC-----------------------------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhh
Confidence 001 17899999999999887765 5899999999988664211000
Q ss_pred CcccC--CCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDN--INGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+... ............. ......+...+|+|++++.++...... ..+.++++.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~L~s~~~~~--itG~~i~vdGG 268 (270)
T 3is3_A 211 HYIPNGTSYTAEQRQQMAAH---------ASPLHRNGWPQDVANVVGFLVSKEGEW--VNGKVLTLDGG 268 (270)
T ss_dssp GGSTTGGGSCHHHHHHHHHH---------HSTTCSCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred hccccccccchHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCCccCC--ccCcEEEeCCC
Confidence 00000 0111111111111 112234678999999999998755431 24889999876
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-12 Score=113.60 Aligned_cols=205 Identities=10% Similarity=0.060 Sum_probs=133.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .. ..++.++.+|++++ +++..++
T Consensus 43 ~aia~~L~~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~-~~~~~~~~~Dv~d~------~~v~~~~ 96 (276)
T 2b4q_A 43 QMIAQGLLEA--GARVFICARDAE---ACADTATRL--------------SA-YGDCQAIPADLSSE------AGARRLA 96 (276)
T ss_dssp HHHHHHHHHT--TCEEEEECSCHH---HHHHHHHHH--------------TT-SSCEEECCCCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------Hh-cCceEEEEeeCCCH------HHHHHHH
Confidence 3688999998 999999998532 111111111 11 12788899999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCC----ccEEEEeccccccCCc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHL----QLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~----~~~v~~SS~~~~~~~~ 139 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+. .+||++||..++...
T Consensus 97 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~- 175 (276)
T 2b4q_A 97 QALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM- 175 (276)
T ss_dssp HHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC-
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC-
Confidence 4 78999999996422 2345678999999998888776421 133 799999998765321
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCC-chhHHHHHHHHHHHHhhh----cCCcEEEecccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPN-GYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPI 214 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~ 214 (318)
|. .. .|+.||.+.+.+.+.+.. .|+++.+++||.+.++
T Consensus 176 ---------~~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~ 218 (276)
T 2b4q_A 176 ---------GE----------------------------QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSR 218 (276)
T ss_dssp ---------CC----------------------------SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCST
T ss_pred ---------CC----------------------------CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCc
Confidence 00 04 899999999999887764 5899999999988553
Q ss_pred cCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 215 WKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 215 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .. .......+... .......+.+.+|+|++++.++...... ..+.++++.++
T Consensus 219 ~~~-------~~--~~~~~~~~~~~-------~~~p~~r~~~p~dvA~~v~~l~s~~~~~--~tG~~i~vdGG 273 (276)
T 2b4q_A 219 MTR-------HI--ANDPQALEADS-------ASIPMGRWGRPEEMAALAISLAGTAGAY--MTGNVIPIDGG 273 (276)
T ss_dssp TTH-------HH--HHCHHHHHHHH-------HTSTTSSCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred chh-------hc--chhHHHHHHhh-------cCCCCCCcCCHHHHHHHHHHHhCccccC--CCCCEEEeCCC
Confidence 210 00 00011111110 0001234789999999999998765321 24788988876
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.47 E-value=6.1e-12 Score=109.19 Aligned_cols=205 Identities=8% Similarity=-0.011 Sum_probs=137.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ...+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 45 ~aia~~la~~--G~~V~~~~~~~~--~~~~~~~~~l--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 100 (271)
T 3v2g_A 45 AAIAKRLALE--GAAVALTYVNAA--ERAQAVVSEI--------------EQAGGRAVAIRADNRDA------EAIEQAI 100 (271)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCCH--HHHHHHHHHH--------------HhcCCcEEEEECCCCCH------HHHHHHH
Confidence 3688999998 999998877431 1112222111 22245788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... ....++|++||..+....
T Consensus 101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~------- 173 (271)
T 3v2g_A 101 RETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP------- 173 (271)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC-------
T ss_pred HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC-------
Confidence 5 78999999997532 2345678999999999999998763 234689999996542210
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
.++ ...|+.||.+.+.+.+.++. +|+++.+++||.|.++......
T Consensus 174 -~~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~- 222 (271)
T 3v2g_A 174 -WPG-----------------------------ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG- 222 (271)
T ss_dssp -STT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC-
T ss_pred -CCC-----------------------------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc-
Confidence 001 17899999999999887765 5899999999998765322110
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ........ .....+...+|+|++++.++...... ..+.++++.++
T Consensus 223 ------~---~~~~~~~~---------~~~~r~~~pedvA~~v~fL~s~~~~~--itG~~i~vdGG 268 (271)
T 3v2g_A 223 ------D---HAEAQRER---------IATGSYGEPQDIAGLVAWLAGPQGKF--VTGASLTIDGG 268 (271)
T ss_dssp ------S---SHHHHHHT---------CTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------h---hHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCcccCC--ccCCEEEeCcC
Confidence 0 01111111 01124678999999999888654321 24889999876
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.47 E-value=5.9e-13 Score=115.31 Aligned_cols=219 Identities=11% Similarity=0.048 Sum_probs=136.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... ..+...++ .. ......+.++.+|++++ +.+..++
T Consensus 24 ~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~l---------~~----~~~~~~~~~~~~D~~~~------~~~~~~~ 80 (267)
T 3t4x_A 24 KAIATSLVAE--GANVLINGRREEN--VNETIKEI---------RA----QYPDAILQPVVADLGTE------QGCQDVI 80 (267)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHHH--HHHHHHHH---------HH----HCTTCEEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHH---------Hh----hCCCceEEEEecCCCCH------HHHHHHH
Confidence 3688999998 9999999995321 11111111 00 11124678899999986 5666666
Q ss_pred c---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCC
Q psy7539 81 E---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 81 ~---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
+ ++|++||+||.... ...++..+++|+.|+..+.+++... .+..++|++||..++...
T Consensus 81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 151 (267)
T 3t4x_A 81 EKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS--------- 151 (267)
T ss_dssp HHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC---------
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC---------
Confidence 5 79999999997532 2345568999999977776665431 255699999997765321
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC-c
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG-W 222 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g-~ 222 (318)
.+ ...|+.||.+.+.+.+.++. +|+++..++||.+..+....... .
T Consensus 152 ~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~ 202 (267)
T 3t4x_A 152 QE-----------------------------MAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSL 202 (267)
T ss_dssp TT-----------------------------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHS
T ss_pred Cc-----------------------------chHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhc
Confidence 01 17899999999999988765 47899999999775431100000 0
Q ss_pred c-cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 T-DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .....+........... ........+.+.+|+|++++.++...... ..+.++++.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~pedvA~~v~fL~s~~~~~--itG~~i~vdGG 261 (267)
T 3t4x_A 203 YPNEQLTIEEAEKRFMKEN-----RPTSIIQRLIRPEEIAHLVTFLSSPLSSA--INGSALRIDGG 261 (267)
T ss_dssp STTSCCCHHHHHHHHHHHH-----CTTCSSCSCBCTHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred CcccCCCHHHHHHHHhhcc-----CCcccccCccCHHHHHHHHHHHcCccccC--ccCCeEEECCC
Confidence 0 00000011111111100 01112346889999999999988754431 24889999988
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.8e-12 Score=112.57 Aligned_cols=188 Identities=12% Similarity=0.066 Sum_probs=122.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++++.. .+...++.++.+|++++ +++..++
T Consensus 42 ~aia~~la~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 93 (272)
T 4dyv_A 42 RAVAVALAGA--GYGVALAGRRL------DALQETA--------------AEIGDDALCVPTDVTDP------DSVRALF 93 (272)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HHHTSCCEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHH--------------HHhCCCeEEEEecCCCH------HHHHHHH
Confidence 3688999998 99999999952 2222221 12235788999999986 5677666
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CC--CccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IH--LQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~--~~~~v~~SS~~~~~~~~~ 140 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+ ..+||++||..+....
T Consensus 94 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-- 171 (272)
T 4dyv_A 94 TATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR-- 171 (272)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC--
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC--
Confidence 5 79999999997422 1335678999999988888876542 12 3589999997764321
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|..+..
T Consensus 172 -------~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 215 (272)
T 4dyv_A 172 -------PY-----------------------------SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMA 215 (272)
T ss_dssp -------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----
T ss_pred -------CC-----------------------------chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhh
Confidence 01 17899999999999887654 589999999998855321
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
.. +. .+..... .......+..++|+|++++.++..+..
T Consensus 216 ~~-------~~----------~~~~~~~--~~~~~~~~~~pedvA~~v~fL~s~~~~ 253 (272)
T 4dyv_A 216 QK-------MK----------AGVPQAD--LSIKVEPVMDVAHVASAVVYMASLPLD 253 (272)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHSCTT
T ss_pred hh-------hc----------ccchhhh--hcccccCCCCHHHHHHHHHHHhCCCCc
Confidence 10 00 0000000 011223478999999999999987664
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-12 Score=114.81 Aligned_cols=206 Identities=13% Similarity=0.082 Sum_probs=133.8
Q ss_pred ChhHHHHHhhCCCc---EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHH
Q psy7539 1 KVLLEKILRTCENV---KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQ 77 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~---~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~ 77 (318)
++++++|+++ |. +|++..|+.. ..+.+.+.+. . .....++.++.+|++++ +++.
T Consensus 47 ~aia~~l~~~--G~~~~~V~~~~r~~~---~~~~~~~~l~--------~----~~~~~~~~~~~~Dv~d~------~~v~ 103 (287)
T 3rku_A 47 KATALEYLEA--SNGDMKLILAARRLE---KLEELKKTID--------Q----EFPNAKVHVAQLDITQA------EKIK 103 (287)
T ss_dssp HHHHHHHHHH--HTTCSEEEEEESCHH---HHHHHHHHHH--------H----HCTTCEEEEEECCTTCG------GGHH
T ss_pred HHHHHHHHHc--CCCCceEEEEECCHH---HHHHHHHHHH--------h----hCCCCeEEEEECCCCCH------HHHH
Confidence 3678899988 65 9999998532 1122221111 0 01134788999999987 5677
Q ss_pred HHhc-------CccEEEEcccccC--------cchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCc
Q psy7539 78 MLSE-------TIHIVYHIAATVR--------FDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 78 ~~~~-------~~d~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~ 139 (318)
.+++ ++|++||+||... ..+.++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 104 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~- 182 (287)
T 3rku_A 104 PFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY- 182 (287)
T ss_dssp HHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-
T ss_pred HHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC-
Confidence 7665 5899999999643 12345678999999999999988421 255799999997764321
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
.. ...|+.||.+.+.+.+.++. +|+++.+++||.|..+.
T Consensus 183 --------~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 225 (287)
T 3rku_A 183 --------PT-----------------------------GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF 225 (287)
T ss_dssp --------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred --------CC-----------------------------CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence 00 17899999999999887765 58999999999885531
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ....+............ ..+..+|+|++++.++...... ..++++++.++
T Consensus 226 ~~------~~~~~~~~~~~~~~~~~------------~p~~pedvA~~v~~l~s~~~~~--i~g~~i~v~~g 277 (287)
T 3rku_A 226 SL------VRYRGNEEQAKNVYKDT------------TPLMADDVADLIVYATSRKQNT--VIADTLIFPTN 277 (287)
T ss_dssp HH------HHTTTCHHHHHHHHTTS------------CCEEHHHHHHHHHHHHTSCTTE--EEEEEEEEETT
T ss_pred cc------ccccCcHHHHHHhhccc------------CCCCHHHHHHHHHHHhCCCCCe--EecceEEeeCC
Confidence 00 00001111111111111 1237899999999998765431 12667888776
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.9e-12 Score=112.21 Aligned_cols=206 Identities=13% Similarity=0.059 Sum_probs=134.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..++.. ...+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 41 ~aia~~la~~--G~~Vv~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~Dl~~~------~~v~~~~ 96 (267)
T 3u5t_A 41 AAIAARLASD--GFTVVINYAGKA--AAAEEVAGKI--------------EAAGGKALTAQADVSDP------AAVRRLF 96 (267)
T ss_dssp HHHHHHHHHH--TCEEEEEESSCS--HHHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCCH--HHHHHHHHHH--------------HhcCCeEEEEEcCCCCH------HHHHHHH
Confidence 3688999999 999988766432 2222222211 22235788999999986 5666665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... ....++|++||..+....
T Consensus 97 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------- 169 (267)
T 3u5t_A 97 ATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH------- 169 (267)
T ss_dssp HHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC-------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC-------
Confidence 4 78999999997522 1335678899999999999988753 122489999997653321
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
+. ...|+.||.+.+.+.+.++. +|+++..++||.|..+....
T Consensus 170 --~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--- 215 (267)
T 3u5t_A 170 --PS-----------------------------YGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE--- 215 (267)
T ss_dssp --TT-----------------------------CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---------
T ss_pred --CC-----------------------------chHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc---
Confidence 00 16899999999999988765 48999999999885532110
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ........+. .......+...+|+|++++.++...... ..+.++++.++
T Consensus 216 ---~--~~~~~~~~~~---------~~~p~~r~~~pedvA~~v~~L~s~~~~~--itG~~i~vdGG 265 (267)
T 3u5t_A 216 ---G--KSDEVRDRFA---------KLAPLERLGTPQDIAGAVAFLAGPDGAW--VNGQVLRANGG 265 (267)
T ss_dssp ----------CHHHHH---------TSSTTCSCBCHHHHHHHHHHHHSTTTTT--CCSEEEEESSS
T ss_pred ---c--CCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCccccC--ccCCEEEeCCC
Confidence 0 0001111111 1112335788999999999988654321 24788888776
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.46 E-value=7.7e-13 Score=113.71 Aligned_cols=193 Identities=12% Similarity=0.087 Sum_probs=131.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... .++.++.+|++++ +++..++
T Consensus 35 ~aia~~l~~~--G~~V~~~~r~~~~~----------------------------~~~~~~~~Dl~d~------~~v~~~~ 78 (253)
T 2nm0_A 35 LAIARAFADA--GDKVAITYRSGEPP----------------------------EGFLAVKCDITDT------EQVEQAY 78 (253)
T ss_dssp HHHHHHHHHT--TCEEEEEESSSCCC----------------------------TTSEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCChHhh----------------------------ccceEEEecCCCH------HHHHHHH
Confidence 3688999998 99999999964321 2377899999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+.....
T Consensus 79 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---- 154 (253)
T 2nm0_A 79 KEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSA---- 154 (253)
T ss_dssp HHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHH----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC----
Confidence 4 47999999997532 2345678999999999999877542 2457999999976543200
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
. ...|+.||.+.+.+.+.+.. .|+++.+++||.+..+...
T Consensus 155 ----------------------------~------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~-- 198 (253)
T 2nm0_A 155 ----------------------------G------QANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK-- 198 (253)
T ss_dssp ----------------------------H------HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------
T ss_pred ----------------------------C------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchh--
Confidence 0 06899999999998887654 5799999999987543211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . ......+... .....+++.+|+|++++.++..+... ..+..+.+.++
T Consensus 199 -----~~-~-~~~~~~~~~~---------~p~~~~~~p~dvA~~i~~l~s~~~~~--~tG~~i~vdGG 248 (253)
T 2nm0_A 199 -----VL-T-DEQRANIVSQ---------VPLGRYARPEEIAATVRFLASDDASY--ITGAVIPVDGG 248 (253)
T ss_dssp ------------CHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hc-C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccccC--CcCcEEEECCc
Confidence 00 0 0001111111 01124789999999999988765421 24788888877
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.5e-12 Score=110.81 Aligned_cols=203 Identities=10% Similarity=0.120 Sum_probs=131.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH--
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM-- 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~-- 78 (318)
++++++|+++ |++|+++.|+... +. ... .+.++.+|+++..+ .+.++.
T Consensus 16 ~~~a~~l~~~--G~~V~~~~r~~~~------~~-----------------~~~--~~~~~~~D~~~~~~---~~~~~~~~ 65 (239)
T 2ekp_A 16 RAIAEALVAR--GYRVAIASRNPEE------AA-----------------QSL--GAVPLPTDLEKDDP---KGLVKRAL 65 (239)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCHH------HH-----------------HHH--TCEEEECCTTTSCH---HHHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH------HH-----------------Hhh--CcEEEecCCchHHH---HHHHHHHH
Confidence 3688999998 9999999996421 11 111 26788999987311 011122
Q ss_pred -HhcCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCC
Q psy7539 79 -LSETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 79 -~~~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
.+.++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++.... .
T Consensus 66 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------~ 138 (239)
T 2ekp_A 66 EALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG-------P 138 (239)
T ss_dssp HHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-------T
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC-------C
Confidence 22479999999997421 2345678999999999998887421 2568999999987654310 0
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcc
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWT 223 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~ 223 (318)
.+. ..|+.||.+.+.+.+.+.. .|++++++|||.+.++...
T Consensus 139 ~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------ 183 (239)
T 2ekp_A 139 VPI-----------------------------PAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL------ 183 (239)
T ss_dssp SCC-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH------
T ss_pred CCC-----------------------------ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh------
Confidence 111 7899999999998887765 4899999999988663211
Q ss_pred cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 224 DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.......+...+... .....+.+.+|+|++++.++...... ..+..+++.++
T Consensus 184 -~~~~~~~~~~~~~~~---------~p~~~~~~~~dvA~~~~~l~s~~~~~--~tG~~~~vdgG 235 (239)
T 2ekp_A 184 -PLRQNPELYEPITAR---------IPMGRWARPEEIARVAAVLCGDEAEY--LTGQAVAVDGG 235 (239)
T ss_dssp -HHHTCHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred -ccccCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCchhcC--CCCCEEEECCC
Confidence 000001111111111 01224789999999999988754321 24788888776
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.6e-12 Score=112.77 Aligned_cols=213 Identities=11% Similarity=0.034 Sum_probs=136.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++.+. .....++.++.+|++++ +++..++
T Consensus 23 ~~ia~~l~~~--G~~V~~~~r~~~------~~~~~---------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 73 (270)
T 1yde_A 23 AGIVRAFVNS--GARVVICDKDES------GGRAL---------------EQELPGAVFILCDVTQE------DDVKTLV 73 (270)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHH---------------HHHCTTEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH------HHHHH---------------HHHhcCCeEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999998532 22211 01113578899999986 5666665
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 74 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----- 148 (270)
T 1yde_A 74 SETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ----- 148 (270)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC-----
Confidence 4 78999999997431 1235678999999999999988641 124799999997553210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.. ...|+.||.+.+.+.+.+.. +|+++.+++||.++++.....
T Consensus 149 ----~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~ 195 (270)
T 1yde_A 149 ----AQ-----------------------------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL 195 (270)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHH
T ss_pred ----CC-----------------------------CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhh
Confidence 00 16899999999999887754 589999999998877421100
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHH
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 297 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el 297 (318)
. .........+...... . ....+...+|+|++++.++....- ..+.++++.++ ....+...
T Consensus 196 ~---~~~~~~~~~~~~~~~~-------~--p~~r~~~p~dva~~v~~L~s~~~~---itG~~i~vdGG--~~~~~~~~ 256 (270)
T 1yde_A 196 A---ALMPDPRASIREGMLA-------Q--PLGRMGQPAEVGAAAVFLASEANF---CTGIELLVTGG--AELGYGCK 256 (270)
T ss_dssp H---TTSSSHHHHHHHHHHT-------S--TTSSCBCHHHHHHHHHHHHHHCTT---CCSCEEEESTT--TTSCC---
T ss_pred h---hcccchHHHHHHHhhc-------C--CCCCCcCHHHHHHHHHHHcccCCC---cCCCEEEECCC--eecccCcC
Confidence 0 0000111111111110 0 112367899999999988865211 24789999888 55554443
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-12 Score=113.63 Aligned_cols=207 Identities=14% Similarity=0.031 Sum_probs=135.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+..... +...++ .....++.++.+|++++ +++..++
T Consensus 47 ~aia~~la~~--G~~V~~~~r~~~~~~--~~~~~~---------------~~~~~~~~~~~~Dv~~~------~~~~~~~ 101 (275)
T 4imr_A 47 AAIAEGLAGA--GAHVILHGVKPGSTA--AVQQRI---------------IASGGTAQELAGDLSEA------GAGTDLI 101 (275)
T ss_dssp HHHHHHHHHT--TCEEEEEESSTTTTH--HHHHHH---------------HHTTCCEEEEECCTTST------THHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCHHHHH--HHHHHH---------------HhcCCeEEEEEecCCCH------HHHHHHH
Confidence 3688999998 999999999754332 111111 12235789999999987 3555555
Q ss_pred c------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 81 E------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~------ 175 (275)
T 4imr_A 102 ERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK------ 175 (275)
T ss_dssp HHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------
T ss_pred HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC------
Confidence 4 78999999997421 2345678999999999999987431 245689999997764321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|..+...
T Consensus 176 ---~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--- 220 (275)
T 4imr_A 176 ---SV-----------------------------VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNA--- 220 (275)
T ss_dssp ---TT-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH---
T ss_pred ---CC-----------------------------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccc---
Confidence 00 05699999999999887765 4899999999977542110
Q ss_pred CcccCCCc-hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ............ ....-+...+|+|++++.++...... ..+.++++.++
T Consensus 221 ----~~~~~~~~~~~~~~~~~--------~p~~r~~~pedvA~~v~fL~s~~a~~--itG~~i~vdGG 274 (275)
T 4imr_A 221 ----DRRAQDPEGWDEYVRTL--------NWMGRAGRPEEMVGAALFLASEACSF--MTGETIFLTGG 274 (275)
T ss_dssp ----HHHHHCHHHHHHHHHHH--------STTCSCBCGGGGHHHHHHHHSGGGTT--CCSCEEEESSC
T ss_pred ----cccccChHHHHHHHhhc--------CccCCCcCHHHHHHHHHHHcCcccCC--CCCCEEEeCCC
Confidence 0000 001111111100 01123567889999999988765431 24788988765
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.46 E-value=5.8e-12 Score=108.08 Aligned_cols=207 Identities=12% Similarity=0.086 Sum_probs=135.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.++... ...+...++ .....++.++.+|+++. +.+..++
T Consensus 21 ~~~a~~l~~~--G~~v~~~~~~~~~-~~~~~~~~~---------------~~~~~~~~~~~~D~~~~------~~~~~~~ 76 (255)
T 3icc_A 21 RAIAKRLAND--GALVAIHYGNRKE-EAEETVYEI---------------QSNGGSAFSIGANLESL------HGVEALY 76 (255)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCSH-HHHHHHHHH---------------HHTTCEEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCeEEEEeCCchH-HHHHHHHHH---------------HhcCCceEEEecCcCCH------HHHHHHH
Confidence 3688999998 9999887554321 111111111 22235788999999876 4555544
Q ss_pred c-------------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCc
Q psy7539 81 E-------------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 ~-------------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~ 139 (318)
+ .+|++||+||.... ...++..+++|+.|+.++++++... .+..++|++||..+....
T Consensus 77 ~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~- 155 (255)
T 3icc_A 77 SSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL- 155 (255)
T ss_dssp HHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC-
T ss_pred HHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC-
Confidence 3 29999999997422 1334568899999999999999853 123489999997764321
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
| ....|+.||.+.+.+.+.+.. +|+++..++||.+..+.
T Consensus 156 ---------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 198 (255)
T 3icc_A 156 ---------P----------------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDM 198 (255)
T ss_dssp ---------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSS
T ss_pred ---------C----------------------------CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccc
Confidence 0 016899999999998887765 58999999999886643
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ............. ......+.+++|+|++++.++...... ..++++++.++
T Consensus 199 ~~~-------~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~s~~~~~--~tG~~i~vdgG 252 (255)
T 3icc_A 199 NAE-------LLSDPMMKQYATT---------ISAFNRLGEVEDIADTAAFLASPDSRW--VTGQLIDVSGG 252 (255)
T ss_dssp STT-------TTTSHHHHHHHHH---------TSTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESSS
T ss_pred hhh-------hcccHHHHHhhhc---------cCCcCCCCCHHHHHHHHHHHhCcccCC--ccCCEEEecCC
Confidence 221 1111111111111 112245778999999999888654321 24889999887
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=9e-12 Score=111.12 Aligned_cols=210 Identities=9% Similarity=0.006 Sum_probs=134.8
Q ss_pred ChhHHHHHhhCCCcEEEEEE-ccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCC----------
Q psy7539 1 KVLLEKILRTCENVKIYILL-RPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL---------- 69 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~-R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~---------- 69 (318)
+++++.|+++ |++|+++. |+.. ..+.+.+.+ . .....++.++.+|++++.-
T Consensus 60 ~aia~~La~~--G~~Vv~~~~r~~~---~~~~~~~~l--------~-----~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 121 (328)
T 2qhx_A 60 RSIAEGLHAE--GYAVCLHYHRSAA---EANALSATL--------N-----ARRPNSAITVQADLSNVATAPVSGADGSA 121 (328)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCHH---HHHHHHHHH--------H-----HHSTTCEEEEECCCSSSCBCC-------C
T ss_pred HHHHHHHHHC--CCEEEEEcCCCHH---HHHHHHHHH--------H-----hhcCCeEEEEEeeCCCchhcccccccccc
Confidence 3688999998 99999999 7421 111111111 0 0113478899999998730
Q ss_pred -CCCHHHHHHHhc-------CccEEEEcccccCc---------------------chhHHHHHHHhHHHHHHHHHHHHhc
Q psy7539 70 -GISAEDRQMLSE-------TIHIVYHIAATVRF---------------------DDYMQTYVFLNTRGTRDMLNLSKQM 120 (318)
Q Consensus 70 -gl~~~~~~~~~~-------~~d~Vih~Aa~~~~---------------------~~~~~~~~~~Nv~gt~~ll~~a~~~ 120 (318)
.-+..++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 201 (328)
T 2qhx_A 122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 201 (328)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000004555443 78999999997421 2334568999999999999887632
Q ss_pred ---CC------CccEEEEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHH
Q psy7539 121 ---IH------LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEG 191 (318)
Q Consensus 121 ---~~------~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 191 (318)
.+ ..+||++||..++... .+ ...|+.||.+.+.
T Consensus 202 m~~~~~~~~~~~g~IV~isS~~~~~~~---------~~-----------------------------~~~Y~asKaal~~ 243 (328)
T 2qhx_A 202 VAGTPAKHRGTNYSIINMVDAMTNQPL---------LG-----------------------------YTIYTMAKGALEG 243 (328)
T ss_dssp HHHSCGGGSCSCEEEEEECCTTTTSCC---------TT-----------------------------CHHHHHHHHHHHH
T ss_pred HHhcCCcCCCCCcEEEEECchhhccCC---------CC-----------------------------cHHHHHHHHHHHH
Confidence 13 5789999997764321 01 1689999999999
Q ss_pred HHHHhhh----cCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHH
Q psy7539 192 VVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLS 267 (318)
Q Consensus 192 ~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~ 267 (318)
+.+.+.. .|+.+.+++||.|.++. . .. + .....+.... + - ..-+...+|+|++++.+
T Consensus 244 l~~~la~el~~~gIrvn~v~PG~v~T~~-~-------~~--~-~~~~~~~~~~----p---~-~~r~~~pedvA~~v~~l 304 (328)
T 2qhx_A 244 LTRSAALELAPLQIRVNGVGPGLSVLVD-D-------MP--P-AVWEGHRSKV----P---L-YQRDSSAAEVSDVVIFL 304 (328)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESSBSCCC-C-------SC--H-HHHHHHHTTC----T---T-TTSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCcEEEEEecCcccCCc-c-------cc--H-HHHHHHHhhC----C---C-CCCCCCHHHHHHHHHHH
Confidence 9887755 48999999999886543 1 11 1 1222222110 0 0 00367899999999999
Q ss_pred hhhccCCCCCCCcEEEeeCC
Q psy7539 268 TWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 268 ~~~~~~~~~~~~~~~ni~~~ 287 (318)
+...... ..+.++++.++
T Consensus 305 ~s~~~~~--itG~~i~vdGG 322 (328)
T 2qhx_A 305 CSSKAKY--ITGTCVKVDGG 322 (328)
T ss_dssp HSGGGTT--CCSCEEEESTT
T ss_pred hCccccC--ccCcEEEECCC
Confidence 8654321 24788998877
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-12 Score=110.19 Aligned_cols=180 Identities=14% Similarity=0.115 Sum_probs=123.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++.+.. .....++.++.+|++++ +++..++
T Consensus 15 ~~~a~~l~~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~v~~~~ 66 (230)
T 3guy_A 15 AELAKLYDAE--GKATYLTGRSE------SKLSTVT--------------NCLSNNVGYRARDLASH------QEVEQLF 66 (230)
T ss_dssp HHHHHHHHHT--TCCEEEEESCH------HHHHHHH--------------HTCSSCCCEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHH--------------HHHhhccCeEeecCCCH------HHHHHHH
Confidence 3688999998 99999999952 2222221 22245788999999986 6788777
Q ss_pred cCc----cEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccccCC
Q psy7539 81 ETI----HIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 81 ~~~----d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
+.+ |+|||+||.... ...++..+++|+.|+.++++++... .+..++|++||..++...
T Consensus 67 ~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~--------- 137 (230)
T 3guy_A 67 EQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK--------- 137 (230)
T ss_dssp HSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC---------
T ss_pred HHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC---------
Confidence 654 899999997421 2345678999999999999988653 112389999997765321
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcc
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWT 223 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~ 223 (318)
.+ ...|+.||.+.+.+.+.+.. +|+++..++||.+..+...
T Consensus 138 ~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~------ 182 (230)
T 3guy_A 138 AQ-----------------------------ESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE------ 182 (230)
T ss_dssp TT-----------------------------CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC------------
T ss_pred CC-----------------------------CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH------
Confidence 01 17899999999999888765 4899999999977442110
Q ss_pred cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 224 DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
... .......+.+.+|+|++++.++..+.
T Consensus 183 -----------~~~---------~~~~~~~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 183 -----------TSG---------KSLDTSSFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp ------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred -----------hcC---------CCCCcccCCCHHHHHHHHHHHHhCcC
Confidence 000 00123467899999999999887654
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.5e-13 Score=115.74 Aligned_cols=207 Identities=10% Similarity=0.045 Sum_probs=131.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|.....+..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 25 ~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 82 (262)
T 3ksu_A 25 ALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDEL--------------EDQGAKVALYQSDLSNE------EEVAKLF 82 (262)
T ss_dssp HHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHH--------------HTTTCEEEEEECCCCSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHH--------------HhcCCcEEEEECCCCCH------HHHHHHH
Confidence 3688999988 999999988533222222222211 12235789999999986 5676665
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ ++|++||+||.... ...++..+++|+.|+..+++++... .+..++|++||..+....
T Consensus 83 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~------- 155 (262)
T 3ksu_A 83 DFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT------- 155 (262)
T ss_dssp HHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHH-------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCC-------
Confidence 4 78999999997422 2345678999999999999999863 123589999997654320
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
.....|+.||.+.+.+.+.++. +|+++..++||.|..+...
T Consensus 156 -------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~---- 200 (262)
T 3ksu_A 156 -------------------------------GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFY---- 200 (262)
T ss_dssp -------------------------------CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHH----
T ss_pred -------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc----
Confidence 0117899999999999888765 4899999999977442110
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..... .. ............+...+|+|++++.++.. .. ...+..+++.++
T Consensus 201 ---~~~~~-~~---------~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~--~itG~~i~vdGg 250 (262)
T 3ksu_A 201 ---GQETK-ES---------TAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GW--WINGQTIFANGG 250 (262)
T ss_dssp ---TCC----------------------CCCCSCCGGGTHHHHHHHHTT-TT--TCCSCEEEESTT
T ss_pred ---ccCch-HH---------HHHHHhcCcccCCCCHHHHHHHHHHHcCC-CC--CccCCEEEECCC
Confidence 00000 00 00011112223567889999999998875 32 125889999887
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.7e-12 Score=111.23 Aligned_cols=195 Identities=8% Similarity=-0.032 Sum_probs=127.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +.+. .. .++.++ +|+.+. .+.+...+
T Consensus 33 ~~~a~~l~~~--G~~V~~~~r~~------~~~~------------------~~-~~~~~~-~D~~~~-----~~~~~~~~ 79 (249)
T 1o5i_A 33 RAVADVLSQE--GAEVTICARNE------ELLK------------------RS-GHRYVV-CDLRKD-----LDLLFEKV 79 (249)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHH------------------HT-CSEEEE-CCTTTC-----HHHHHHHS
T ss_pred HHHHHHHHHC--CCEEEEEcCCH------HHHH------------------hh-CCeEEE-eeHHHH-----HHHHHHHh
Confidence 3688999988 99999999953 1111 11 256677 999211 12233333
Q ss_pred cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHH----HHhcCCCccEEEEeccccccCCcccccccCCCC
Q psy7539 81 ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNL----SKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPP 149 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~----a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p 149 (318)
.++|+|||+||.... ...++..+++|+.|+.++.++ +++. +..+||++||..++... .+
T Consensus 80 ~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---------~~ 149 (249)
T 1o5i_A 80 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVISPI---------EN 149 (249)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC---------TT
T ss_pred cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcchHhcCCC---------CC
Confidence 389999999997432 234567889999997766544 4443 56899999998775421 01
Q ss_pred CChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccC
Q psy7539 150 VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDN 225 (318)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~ 225 (318)
...|+.||.+.+.+.+.+.. +|+++++++||.+.++... .
T Consensus 150 -----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------~ 193 (249)
T 1o5i_A 150 -----------------------------LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK-------E 193 (249)
T ss_dssp -----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH-------H
T ss_pred -----------------------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccc-------c
Confidence 16899999999988877654 5899999999988764210 0
Q ss_pred CCchHHHHH-HHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 226 INGPTGLLI-GAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 226 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ..... .+... .....+++++|+|++++.++...... ..+.+|++.++
T Consensus 194 ~~--~~~~~~~~~~~---------~p~~~~~~~~dvA~~i~~l~s~~~~~--~tG~~~~vdgG 243 (249)
T 1o5i_A 194 LL--SEEKKKQVESQ---------IPMRRMAKPEEIASVVAFLCSEKASY--LTGQTIVVDGG 243 (249)
T ss_dssp HS--CHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred cc--hhhHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCccccC--CCCCEEEECCC
Confidence 00 01111 11111 11235889999999999988754321 24789999877
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.45 E-value=8.9e-13 Score=114.09 Aligned_cols=207 Identities=12% Similarity=-0.005 Sum_probs=137.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+.... ..+.+.++. .....++.++.+|++++ +++..+++
T Consensus 37 ~~a~~l~~~--G~~v~~~~~~~~~~-~~~~~~~l~--------------~~~~~~~~~~~~Dl~~~------~~v~~~~~ 93 (267)
T 3gdg_A 37 EAARGCAEM--GAAVAITYASRAQG-AEENVKELE--------------KTYGIKAKAYKCQVDSY------ESCEKLVK 93 (267)
T ss_dssp HHHHHHHHT--SCEEEECBSSSSSH-HHHHHHHHH--------------HHHCCCEECCBCCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCeEEEEeCCcchh-HHHHHHHHH--------------HhcCCceeEEecCCCCH------HHHHHHHH
Confidence 688999998 99999998865432 122222221 12245889999999986 56666554
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
++|+|||+||.... ...+...+++|+.|+.++++++... .+..++|++||..+.....
T Consensus 94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 168 (267)
T 3gdg_A 94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF----- 168 (267)
T ss_dssp HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS-----
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC-----
Confidence 67999999997532 2345678999999999999987321 2456999999976643210
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
+.+. ..|+.||.+.+.+.+.+.. ..+.+..+.||.+-.....
T Consensus 169 --~~~~-----------------------------~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~---- 213 (267)
T 3gdg_A 169 --PQEQ-----------------------------TSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD---- 213 (267)
T ss_dssp --SSCC-----------------------------HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG----
T ss_pred --CCCC-----------------------------CcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh----
Confidence 0111 6899999999999988776 2378889999977442210
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. +......+.. ......+.+.+|+|++++.++...... ..+.++++.++
T Consensus 214 ---~~--~~~~~~~~~~---------~~~~~r~~~~~dva~~~~~l~s~~~~~--itG~~i~vdgG 263 (267)
T 3gdg_A 214 ---FV--PKETQQLWHS---------MIPMGRDGLAKELKGAYVYFASDASTY--TTGADLLIDGG 263 (267)
T ss_dssp ---GS--CHHHHHHHHT---------TSTTSSCEETHHHHHHHHHHHSTTCTT--CCSCEEEESTT
T ss_pred ---hC--CHHHHHHHHh---------cCCCCCCcCHHHHHhHhheeecCcccc--ccCCEEEECCc
Confidence 11 1122222222 122346778999999999988654321 24889999887
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.2e-12 Score=120.91 Aligned_cols=206 Identities=14% Similarity=0.129 Sum_probs=138.9
Q ss_pred hhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++.|+++ |+ +|+++.|+.......+.+.+.+ .....++.++.+|++++ +.+..++
T Consensus 241 ~la~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l--------------~~~g~~v~~~~~Dv~d~------~~v~~~~ 298 (486)
T 2fr1_A 241 QIARWLARR--GAPHLLLVSRSGPDADGAGELVAEL--------------EALGARTTVAACDVTDR------ESVRELL 298 (486)
T ss_dssp HHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHH--------------HHTTCEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHc--CCCEEEEEcCCCCCcHHHHHHHHHH--------------HhcCCEEEEEEeCCCCH------HHHHHHH
Confidence 688999998 88 6999999754332222222111 12235789999999987 6788877
Q ss_pred cCc------cEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCC
Q psy7539 81 ETI------HIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 81 ~~~------d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
+++ |+|||+||.... .......+++|+.|+.+|.+++... +..+||++||..+.....
T Consensus 299 ~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~SS~a~~~g~~-------- 369 (486)
T 2fr1_A 299 GGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAP-------- 369 (486)
T ss_dssp HTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCT--------
T ss_pred HHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEEcChHhcCCCC--------
Confidence 654 999999997532 2335568889999999999999985 789999999965532210
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCC
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNIN 227 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~ 227 (318)
....|+.+|...+.+.......|+++++++||.+.+.. +.
T Consensus 370 ------------------------------g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~g----------m~ 409 (486)
T 2fr1_A 370 ------------------------------GLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSG----------MA 409 (486)
T ss_dssp ------------------------------TCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---------------
T ss_pred ------------------------------CCHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCc----------cc
Confidence 01789999999999887665579999999999775421 00
Q ss_pred chHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHH
Q psy7539 228 GPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGK 302 (318)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~ 302 (318)
. ... . .. -......+++.+|+++++..++..... .+.+. .+.|..+...+.
T Consensus 410 ~-~~~-----~---~~---~~~~g~~~i~~e~~a~~l~~~l~~~~~-------~~~v~-----~~d~~~~~~~~~ 460 (486)
T 2fr1_A 410 E-GPV-----A---DR---FRRHGVIEMPPETACRALQNALDRAEV-------CPIVI-----DVRWDRFLLAYT 460 (486)
T ss_dssp -------------------CTTTTEECBCHHHHHHHHHHHHHTTCS-------SCEEC-----EECHHHHHHHHT
T ss_pred c-hhH-----H---HH---HHhcCCCCCCHHHHHHHHHHHHhCCCC-------eEEEE-----eCCHHHHhhhhc
Confidence 0 000 0 00 011234678999999999999986542 22332 356777765443
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-11 Score=107.36 Aligned_cols=217 Identities=9% Similarity=-0.041 Sum_probs=136.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.. ..+.+.+.+. . .....++.++.+|++++ +++..++
T Consensus 22 ~aia~~l~~~--G~~V~~~~r~~~---~~~~~~~~l~--------~----~~~~~~~~~~~~Dv~~~------~~v~~~~ 78 (265)
T 3lf2_A 22 LATVELLLEA--GAAVAFCARDGE---RLRAAESALR--------Q----RFPGARLFASVCDVLDA------LQVRAFA 78 (265)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH--------H----HSTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHHH--------H----hcCCceEEEEeCCCCCH------HHHHHHH
Confidence 3688999998 999999999532 1111111110 0 01123588999999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+.....
T Consensus 79 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---- 154 (265)
T 3lf2_A 79 EACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEP---- 154 (265)
T ss_dssp HHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCT----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCC----
Confidence 3 68999999997422 2345678999999999999988542 2345799999977643210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
. ...|+.||.+.+.+.+.++. +|+++..++||.|.++.....
T Consensus 155 -----~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 200 (265)
T 3lf2_A 155 -----H-----------------------------MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRR 200 (265)
T ss_dssp -----T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred -----C-----------------------------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhh
Confidence 0 17899999999998887765 589999999998865321100
Q ss_pred CCc-ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGW-TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .........+....... .......+...+|+|++++.++...... ..+.++++.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~-------~~~p~~r~~~pedvA~~v~fL~s~~~~~--itG~~i~vdGG 260 (265)
T 3lf2_A 201 FEAREERELDWAQWTAQLARN-------KQIPLGRLGKPIEAARAILFLASPLSAY--TTGSHIDVSGG 260 (265)
T ss_dssp HTC------CHHHHHHHHHHH-------TTCTTCSCBCHHHHHHHHHHHHSGGGTT--CCSEEEEESSS
T ss_pred hhhhhhhccCHHHHHHHHhhc-------cCCCcCCCcCHHHHHHHHHHHhCchhcC--cCCCEEEECCC
Confidence 000 00000011111111110 0011234778999999999988754431 24889999877
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.44 E-value=5.1e-12 Score=110.28 Aligned_cols=192 Identities=12% Similarity=0.058 Sum_probs=124.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. ......+.++.+|++++ +++..++
T Consensus 47 ~aia~~la~~--G~~V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 102 (281)
T 4dry_A 47 RGIAQALSAE--GYSVVITGRRPD---VLDAAAGEIG-------------GRTGNIVRAVVCDVGDP------DQVAALF 102 (281)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH-------------HHHSSCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHHH-------------hcCCCeEEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999532 1111111110 11123468999999986 5666655
Q ss_pred c-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CC--CccEEEEeccccccCCcc
Q psy7539 81 E-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IH--LQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~--~~~~v~~SS~~~~~~~~~ 140 (318)
+ ++|++||+||.... .+.++..+++|+.|+.++.+++... .+ ..+||++||..+....
T Consensus 103 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-- 180 (281)
T 4dry_A 103 AAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR-- 180 (281)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC--
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC--
Confidence 4 67999999997422 2345678999999988888776542 11 3589999997764321
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
.+ ...|+.||.+.+.+.+.++. +|+++.+++||.|..+..
T Consensus 181 -------~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 224 (281)
T 4dry_A 181 -------PN-----------------------------SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMT 224 (281)
T ss_dssp -------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC---
T ss_pred -------CC-----------------------------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh
Confidence 11 17899999999998887664 589999999998754321
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
... .... . ..........++..+|+|++++.++..+..
T Consensus 225 ~~~-----------------~~~~-~-~~~~~~~~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 225 ARM-----------------STGV-L-QANGEVAAEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp ---------------------CEE-E-CTTSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred hhh-----------------cchh-h-hhhhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence 100 0000 0 000011123478899999999999987664
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-12 Score=108.06 Aligned_cols=183 Identities=9% Similarity=-0.027 Sum_probs=127.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|+++.|+ .. +|++++ +++..+++
T Consensus 21 ~~a~~l~~~--G~~V~~~~r~----------------------------~~---------~D~~~~------~~v~~~~~ 55 (223)
T 3uce_A 21 ELAKQLESE--HTIVHVASRQ----------------------------TG---------LDISDE------KSVYHYFE 55 (223)
T ss_dssp HHHHHHCST--TEEEEEESGG----------------------------GT---------CCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEecCC----------------------------cc---------cCCCCH------HHHHHHHH
Confidence 577888877 8888888773 11 788776 56666664
Q ss_pred ---CccEEEEcccccC--------cchhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCCC
Q psy7539 82 ---TIHIVYHIAATVR--------FDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPPP 149 (318)
Q Consensus 82 ---~~d~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~p 149 (318)
++|++||+||... ....++..+++|+.|+.++++++... ..-.++|++||..++... .+
T Consensus 56 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------~~ 126 (223)
T 3uce_A 56 TIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV---------AN 126 (223)
T ss_dssp HHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC---------TT
T ss_pred HhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC---------CC
Confidence 7899999999751 12345678999999999999999863 112389999997765421 01
Q ss_pred CChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccccccCCCCCCcccCCC
Q psy7539 150 VSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIIIPIWKDPLPGWTDNIN 227 (318)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~ 227 (318)
...|+.||.+.+.+.+.+.. ..+++..++||.+.++.... ..
T Consensus 127 -----------------------------~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~-------~~ 170 (223)
T 3uce_A 127 -----------------------------TYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKG-------MN 170 (223)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTT-------SC
T ss_pred -----------------------------chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhh-------cc
Confidence 17899999999999988876 34899999999887643221 11
Q ss_pred ch--HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 228 GP--TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 228 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ..+....... .....+.+++|+|++++.++..... .++++++.++
T Consensus 171 ~~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~~~~l~~~~~~----tG~~i~vdgG 219 (223)
T 3uce_A 171 ADDRDAMYQRTQSH---------LPVGKVGEASDIAMAYLFAIQNSYM----TGTVIDVDGG 219 (223)
T ss_dssp HHHHHHHHHHHHHH---------STTCSCBCHHHHHHHHHHHHHCTTC----CSCEEEESTT
T ss_pred hhhHHHHHHHHhhc---------CCCCCccCHHHHHHHHHHHccCCCC----CCcEEEecCC
Confidence 11 1111212111 1123578899999999999875443 4889999887
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-11 Score=108.26 Aligned_cols=208 Identities=10% Similarity=0.033 Sum_probs=134.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ...+.+.+.+. .....++.++.+|++++. ...+++..++
T Consensus 37 ~aia~~L~~~--G~~V~~~~r~~~--~~~~~~~~~l~-------------~~~~~~~~~~~~Dv~~~~--~~~~~v~~~~ 97 (288)
T 2x9g_A 37 RAIAVKLHQT--GYRVVIHYHNSA--EAAVSLADELN-------------KERSNTAVVCQADLTNSN--VLPASCEEII 97 (288)
T ss_dssp HHHHHHHHHH--TCEEEEEESSCH--HHHHHHHHHHH-------------HHSTTCEEEEECCCSCST--THHHHHHHHH
T ss_pred HHHHHHHHHC--CCeEEEEeCCch--HHHHHHHHHHH-------------hhcCCceEEEEeecCCcc--CCHHHHHHHH
Confidence 3688999999 999999999641 11122221110 012347889999999821 0014566555
Q ss_pred c-------CccEEEEcccccCc---------c--------hhHHHHHHHhHHHHHHHHHHHHhcC---C------CccEE
Q psy7539 81 E-------TIHIVYHIAATVRF---------D--------DYMQTYVFLNTRGTRDMLNLSKQMI---H------LQLFV 127 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~---------~--------~~~~~~~~~Nv~gt~~ll~~a~~~~---~------~~~~v 127 (318)
+ ++|+|||+||.... . ..+...+++|+.|+..+++++...- + ..+||
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv 177 (288)
T 2x9g_A 98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV 177 (288)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence 4 78999999997421 1 2244688999999999998876531 1 45899
Q ss_pred EEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcE
Q psy7539 128 YVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPC 203 (318)
Q Consensus 128 ~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~ 203 (318)
++||..++... .+ ...|+.||.+.+.+.+.+.. +|+++
T Consensus 178 ~isS~~~~~~~---------~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~v 219 (288)
T 2x9g_A 178 NLCDAMVDQPC---------MA-----------------------------FSLYNMGKHALVGLTQSAALELAPYGIRV 219 (288)
T ss_dssp EECCTTTTSCC---------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEecccccCCC---------CC-----------------------------CchHHHHHHHHHHHHHHHHHHhhccCeEE
Confidence 99997764321 01 16899999999988877654 48999
Q ss_pred EEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCc-chHHHHHHHHHHHhhhccCCCCCCCcEE
Q psy7539 204 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADF-LPVDVLVNGVLLSTWNFLSNPGNTMRVI 282 (318)
Q Consensus 204 ~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~Dva~~~~~~~~~~~~~~~~~~~~~ 282 (318)
.+++||.+.++. . . .+ .....+.... + ..-+ ...+|+|++++.++...... ..+..+
T Consensus 220 n~v~PG~v~t~~-~-~--------~~-~~~~~~~~~~-------p--~~r~~~~pedvA~~v~~l~s~~~~~--itG~~i 277 (288)
T 2x9g_A 220 NGVAPGVSLLPV-A-M--------GE-EEKDKWRRKV-------P--LGRREASAEQIADAVIFLVSGSAQY--ITGSII 277 (288)
T ss_dssp EEEEESSCSCCT-T-S--------CH-HHHHHHHHTC-------T--TTSSCCCHHHHHHHHHHHHSGGGTT--CCSCEE
T ss_pred EEEEeccccCcc-c-c--------Ch-HHHHHHHhhC-------C--CCCCCCCHHHHHHHHHHHhCccccC--ccCCEE
Confidence 999999887643 1 0 11 1111221110 0 1124 78999999999998754321 247888
Q ss_pred EeeCC
Q psy7539 283 NLTAN 287 (318)
Q Consensus 283 ni~~~ 287 (318)
++.++
T Consensus 278 ~vdGG 282 (288)
T 2x9g_A 278 KVDGG 282 (288)
T ss_dssp EESTT
T ss_pred EECcc
Confidence 88776
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.4e-12 Score=111.60 Aligned_cols=199 Identities=14% Similarity=0.081 Sum_probs=133.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC-----CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK-----NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAED 75 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~-----~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~ 75 (318)
++++++|+++ |++|+++.|+.... ...+...+. .....++.++.+|++++ ++
T Consensus 23 ~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~Dv~~~------~~ 79 (285)
T 3sc4_A 23 LAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEI---------------EEAGGQALPIVGDIRDG------DA 79 (285)
T ss_dssp HHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHH---------------HHHTSEEEEEECCTTSH------HH
T ss_pred HHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHH---------------HhcCCcEEEEECCCCCH------HH
Confidence 3688999988 99999999986432 121111111 22345789999999986 56
Q ss_pred HHHHhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCC
Q psy7539 76 RQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKE 138 (318)
Q Consensus 76 ~~~~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~ 138 (318)
+..+++ ++|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 80 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~ 159 (285)
T 3sc4_A 80 VAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK 159 (285)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC
Confidence 666654 79999999997522 2345678899999999999988753 134589999997653210
Q ss_pred cccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccc
Q psy7539 139 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPI 214 (318)
Q Consensus 139 ~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~ 214 (318)
. . ....|+.||.+.+.+.+.++. +|+++..++||.++.
T Consensus 160 ~--------~-----------------------------~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~- 201 (285)
T 3sc4_A 160 W--------L-----------------------------RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVA- 201 (285)
T ss_dssp G--------S-----------------------------CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBC-
T ss_pred C--------C-----------------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccc-
Confidence 0 0 016899999999998887754 589999999983211
Q ss_pred cCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC
Q psy7539 215 WKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 286 (318)
Q Consensus 215 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~ 286 (318)
..+........ .....+...+|+|++++.++..... ..++.+.+.+
T Consensus 202 ---------------t~~~~~~~~~~--------~~~~r~~~pedvA~~~~~l~s~~~~---~tG~~i~~dg 247 (285)
T 3sc4_A 202 ---------------TAAVQNLLGGD--------EAMARSRKPEVYADAAYVVLNKPSS---YTGNTLLCED 247 (285)
T ss_dssp ---------------CHHHHHHHTSC--------CCCTTCBCTHHHHHHHHHHHTSCTT---CCSCEEEHHH
T ss_pred ---------------cHHHHhhcccc--------ccccCCCCHHHHHHHHHHHhCCccc---ccceEEEEcC
Confidence 01112222111 1123467889999999999876542 1366665544
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.6e-11 Score=104.83 Aligned_cols=198 Identities=15% Similarity=0.031 Sum_probs=133.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++.+.. ... .+.++.+|++++ +++..++
T Consensus 19 ~~ia~~l~~~--G~~V~~~~r~~------~~~~~~~--------------~~~--~~~~~~~D~~~~------~~~~~~~ 68 (245)
T 1uls_A 19 RATLELFAKE--GARLVACDIEE------GPLREAA--------------EAV--GAHPVVMDVADP------ASVERGF 68 (245)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HTT--TCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHHH--------------HHc--CCEEEEecCCCH------HHHHHHH
Confidence 3688999988 99999999952 2222221 111 377899999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||...++.
T Consensus 69 ~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------ 142 (245)
T 1uls_A 69 AEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN------ 142 (245)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCC------
Confidence 4 58999999997432 2345678999999999998887642 24579999999763221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.. ...|+.||...+.+.+.... .|+++++++||.+..+...
T Consensus 143 ----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-- 187 (245)
T 1uls_A 143 ----LG-----------------------------QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA-- 187 (245)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS--
T ss_pred ----CC-----------------------------chhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchh--
Confidence 00 16899999999988877654 5899999999988553211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. . ......+.... + ...+.+.+|+|++++.++...... ..+..+++.++
T Consensus 188 -----~~-~-~~~~~~~~~~~----p-----~~~~~~~~dvA~~v~~l~s~~~~~--~tG~~~~vdgG 237 (245)
T 1uls_A 188 -----KV-P-EKVREKAIAAT----P-----LGRAGKPLEVAYAALFLLSDESSF--ITGQVLFVDGG 237 (245)
T ss_dssp -----SS-C-HHHHHHHHHTC----T-----TCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hc-C-HHHHHHHHhhC----C-----CCCCcCHHHHHHHHHHHhCchhcC--CcCCEEEECCC
Confidence 11 1 11112222110 0 123789999999999988764321 24788888876
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.43 E-value=1.6e-12 Score=113.63 Aligned_cols=184 Identities=10% Similarity=0.018 Sum_probs=123.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .....++.++.+|++++ +++..++
T Consensus 42 ~~la~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~~~Dl~d~------~~v~~~~ 97 (286)
T 1xu9_A 42 REMAYHLAKM--GAHVVVTARSKE---TLQKVVSHCL-------------ELGAASAHYIAGTMEDM------TFAEQFV 97 (286)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH-------------HHTCSEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHHH-------------HhCCCceEEEeCCCCCH------HHHHHHH
Confidence 3688999988 999999999532 1111111110 11123688999999986 4566555
Q ss_pred c-------CccEEEEc-ccccCc------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHI-AATVRF------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~-Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|+|||+ ||.... .......+++|+.|+.++++++... .+..+||++||..++...
T Consensus 98 ~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------ 171 (286)
T 1xu9_A 98 AQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY------ 171 (286)
T ss_dssp HHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC------
T ss_pred HHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC------
Confidence 4 79999999 565321 2334578999999999999887642 123689999997764321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEecccccccccCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G~~~~~ 218 (318)
++. ..|+.||.+.+.+...+.. .++++++++||.+..+
T Consensus 172 ---~~~-----------------------------~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~---- 215 (286)
T 1xu9_A 172 ---PMV-----------------------------AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---- 215 (286)
T ss_dssp ---TTC-----------------------------HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH----
T ss_pred ---CCc-----------------------------cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh----
Confidence 111 7899999999988876543 3789999999966331
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
+......+ .....+++.+|+|+.++.++..+.
T Consensus 216 -------------~~~~~~~~---------~~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 216 -------------TAMKAVSG---------IVHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp -------------HHHHHSCG---------GGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred -------------hHHHhccc---------cccCCCCCHHHHHHHHHHHHhcCC
Confidence 11111111 122457899999999999987754
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.5e-12 Score=120.10 Aligned_cols=207 Identities=14% Similarity=0.106 Sum_probs=139.9
Q ss_pred hhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++|+++ |+ +|+++.|+.......+.+.+.+ .....++.++.+|++++ +.+..++
T Consensus 274 ~lA~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l--------------~~~g~~v~~~~~Dvtd~------~~v~~~~ 331 (511)
T 2z5l_A 274 RLARRLAAE--GAERLVLTSRRGPEAPGAAELAEEL--------------RGHGCEVVHAACDVAER------DALAALV 331 (511)
T ss_dssp HHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHH--------------HTTTCEEEEEECCSSCH------HHHHHHH
T ss_pred HHHHHHHhC--CCcEEEEEecCCcccHHHHHHHHHH--------------HhcCCEEEEEEeCCCCH------HHHHHHH
Confidence 678899887 88 7999999754322222222111 22235789999999987 6788887
Q ss_pred cC--ccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCC
Q psy7539 81 ET--IHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVS 151 (318)
Q Consensus 81 ~~--~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~ 151 (318)
++ +|+|||+||..... ..+...+++|+.|+.+|.+++....+..+||++||..+..... .
T Consensus 332 ~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~---------g-- 400 (511)
T 2z5l_A 332 TAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA---------G-- 400 (511)
T ss_dssp HHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT---------T--
T ss_pred hcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC---------C--
Confidence 64 99999999975322 3455688999999999999987643678999999975532110 0
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTG 231 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~ 231 (318)
...|+.+|...|.+.......|+++++++||.+-+. ++....
T Consensus 401 ---------------------------~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~t----------gm~~~~- 442 (511)
T 2z5l_A 401 ---------------------------QGAYAAANAALDALAERRRAAGLPATSVAWGLWGGG----------GMAAGA- 442 (511)
T ss_dssp ---------------------------BHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCST----------TCCCCH-
T ss_pred ---------------------------CHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCC----------cccccc-
Confidence 168999999999999876557999999999966221 111110
Q ss_pred HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHH
Q psy7539 232 LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGK 302 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~ 302 (318)
....+. .....+++.+|+++++..++..+.. .+.+. .+.|..+...+.
T Consensus 443 ~~~~~~-----------~~g~~~l~~e~~a~~l~~al~~~~~-------~v~v~-----~~d~~~~~~~~~ 490 (511)
T 2z5l_A 443 GEESLS-----------RRGLRAMDPDAAVDALLGAMGRNDV-------CVTVV-----DVDWERFAPATN 490 (511)
T ss_dssp HHHHHH-----------HHTBCCBCHHHHHHHHHHHHHHTCS-------EEEEC-----CBCHHHHHHHHH
T ss_pred cHHHHH-----------hcCCCCCCHHHHHHHHHHHHhCCCC-------EEEEE-----eCCHHHHHhhhc
Confidence 001111 1123578999999999999987542 33333 356777766554
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.9e-12 Score=110.33 Aligned_cols=186 Identities=9% Similarity=0.037 Sum_probs=128.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.... . ....++.+|++++ +++..++
T Consensus 21 ~~ia~~l~~~--G~~V~~~~r~~~~~------------------------~---~~~~~~~~D~~~~------~~v~~~~ 65 (241)
T 1dhr_A 21 SRCVQAFRAR--NWWVASIDVVENEE------------------------A---SASVIVKMTDSFT------EQADQVT 65 (241)
T ss_dssp HHHHHHHHTT--TCEEEEEESSCCTT------------------------S---SEEEECCCCSCHH------HHHHHHH
T ss_pred HHHHHHHHhC--CCEEEEEeCChhhc------------------------c---CCcEEEEcCCCCH------HHHHHHH
Confidence 3688999988 99999999975432 1 2356788999876 4566555
Q ss_pred c---------CccEEEEcccccC-----cc---hhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccc
Q psy7539 81 E---------TIHIVYHIAATVR-----FD---DYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~---------~~d~Vih~Aa~~~-----~~---~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||... .. ..++..+++|+.|+.++++++... ....+||++||..++...
T Consensus 66 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 141 (241)
T 1dhr_A 66 AEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT---- 141 (241)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----
T ss_pred HHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC----
Confidence 3 7899999999642 11 234568899999999999998753 112589999997765321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEecccccccccC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G~~~ 216 (318)
.+ ...|+.||.+.+.+.+.+.. .|+++++++||.+-.+
T Consensus 142 -----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~-- 185 (241)
T 1dhr_A 142 -----PG-----------------------------MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP-- 185 (241)
T ss_dssp -----TT-----------------------------BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH--
T ss_pred -----CC-----------------------------chHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc--
Confidence 00 16899999999999988754 2589999999966321
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+...... ......+++.+|+|++++.++..... ...++.+++.++
T Consensus 186 ---------------~~~~~~~---------~~~~~~~~~~~~vA~~v~~l~~~~~~--~~~G~~~~v~g~ 230 (241)
T 1dhr_A 186 ---------------MNRKSMP---------EADFSSWTPLEFLVETFHDWITGNKR--PNSGSLIQVVTT 230 (241)
T ss_dssp ---------------HHHHHST---------TSCGGGSEEHHHHHHHHHHHHTTTTC--CCTTCEEEEEEE
T ss_pred ---------------cccccCc---------chhhccCCCHHHHHHHHHHHhcCCCc--CccceEEEEeCC
Confidence 1111100 01123457789999999998865432 124778888765
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.42 E-value=7.8e-12 Score=108.55 Aligned_cols=202 Identities=13% Similarity=0.071 Sum_probs=127.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ ... .++.++.+|++++ +++..++
T Consensus 35 ~aia~~La~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~-~~~~~~~~Dv~d~------~~v~~~~ 88 (272)
T 2nwq_A 35 EACARRFAEA--GWSLVLTGRREE---RLQALAGEL--------------SAK-TRVLPLTLDVRDR------AAMSAAV 88 (272)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------TTT-SCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHh--------------hcC-CcEEEEEcCCCCH------HHHHHHH
Confidence 3688999998 999999999521 111121111 111 4788999999986 5777776
Q ss_pred cC-------ccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCc-cEEEEeccccccCCccc
Q psy7539 81 ET-------IHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQ-LFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~~-------~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~-~~v~~SS~~~~~~~~~~ 141 (318)
+. +|+|||+||.... ...++..+++|+.|+.++++++... .+.. +||++||..++...
T Consensus 89 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~--- 165 (272)
T 2nwq_A 89 DNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY--- 165 (272)
T ss_dssp HTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC---
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC---
Confidence 54 5999999997432 2345678999999988877766421 2455 99999997764321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.. ...|+.||.+.+.+.+.+.. .|+++.+++||.+.++...
T Consensus 166 ------~~-----------------------------~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~ 210 (272)
T 2nwq_A 166 ------PG-----------------------------SHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSL 210 (272)
T ss_dssp ------TT-----------------------------CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----
T ss_pred ------CC-----------------------------CchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchh
Confidence 00 16899999999999988764 5799999999988653211
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ...+..... .... ....++..+|+|++++.++..... ..+..+.+.++
T Consensus 211 ~------~~~~~~~~~--------~~~~----~~~~~~~pedvA~~v~~l~s~~~~---~~g~~i~v~~~ 259 (272)
T 2nwq_A 211 V------RFGGDQARY--------DKTY----AGAHPIQPEDIAETIFWIMNQPAH---LNINSLEIMPV 259 (272)
T ss_dssp ---------------------------------CCCCBCHHHHHHHHHHHHTSCTT---EEEEEEEEEET
T ss_pred c------ccccchHHH--------HHhh----ccCCCCCHHHHHHHHHHHhCCCcc---CccceEEEeec
Confidence 0 000000000 0000 011247899999999999875432 12455666544
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=3.3e-12 Score=108.46 Aligned_cols=179 Identities=17% Similarity=0.105 Sum_probs=122.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ++++.. .....++.++.+|++++ +++..++
T Consensus 17 ~a~a~~l~~~--G~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~~~D~~~~------~~v~~~~ 68 (235)
T 3l6e_A 17 RALTIGLVER--GHQVSMMGRRYQ------RLQQQE--------------LLLGNAVIGIVADLAHH------EDVDVAF 68 (235)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHH--------------HHHGGGEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH------HHHHHH--------------HHhcCCceEEECCCCCH------HHHHHHH
Confidence 3688999998 999999999522 222211 11123688999999986 5666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ .+|++||+||.... ...++..+++|+.|+..+++++... .+-.++|++||..+....
T Consensus 69 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~------ 142 (235)
T 3l6e_A 69 AAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK------ 142 (235)
T ss_dssp HHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC------
T ss_pred HHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC------
Confidence 4 68999999997422 2345678999999999999888542 112389999997664321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
|. ...|+.||.+.+.+.+.+.. .|+++..++||.|-.+...
T Consensus 143 ----~~----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--- 187 (235)
T 3l6e_A 143 ----AN----------------------------ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWD--- 187 (235)
T ss_dssp ----SS----------------------------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----
T ss_pred ----CC----------------------------CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchh---
Confidence 00 06899999999999887765 5789999999977432100
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
... . .....+...+|+|++++.++..+.
T Consensus 188 ----~~~------------~--------~~~~~~~~pedvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 188 ----NTD------------H--------VDPSGFMTPEDAAAYMLDALEARS 215 (235)
T ss_dssp ---------------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred ----ccC------------C--------CCCcCCCCHHHHHHHHHHHHhCCC
Confidence 000 0 011257899999999999997654
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.9e-12 Score=108.82 Aligned_cols=191 Identities=11% Similarity=0.037 Sum_probs=123.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 18 ~aia~~la~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~Dv~d~------~~v~~~~ 72 (264)
T 3tfo_A 18 EGIARELGVA--GAKILLGARRQA---RIEAIATEI--------------RDAGGTALAQVLDVTDR------HSVAAFA 72 (264)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHH---HHHHHHHHH--------------HHTTCEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHH--------------HhcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999988 999999999532 112222111 12235788999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+..+++++... .+..+||++||..+....
T Consensus 73 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~----- 147 (264)
T 3tfo_A 73 QAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV----- 147 (264)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC-----
Confidence 4 78999999997532 2345678999999999888876531 245689999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccccccCCCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
| ....|+.||.+.+.+.+.+.. .|+++..++||.|..+....
T Consensus 148 -----~----------------------------~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~--- 191 (264)
T 3tfo_A 148 -----P----------------------------TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT--- 191 (264)
T ss_dssp -----T----------------------------TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----------
T ss_pred -----C----------------------------CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc---
Confidence 0 016899999999999888776 48999999999775432110
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
.... . . .... ......+...+|+|++++.++..+..
T Consensus 192 ----~~~~-~--------~-~~~~--~~~~~~~~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 192 ----ITHE-E--------T-MAAM--DTYRAIALQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp --------------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred ----ccch-h--------H-HHHH--HhhhccCCCHHHHHHHHHHHhcCCcc
Confidence 0000 0 0 0000 00111246899999999999987654
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.6e-12 Score=108.61 Aligned_cols=186 Identities=13% Similarity=0.104 Sum_probs=122.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .. .....++.++.+|+++. +++..++
T Consensus 21 ~aia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~--------~~---~~~~~~~~~~~~Dv~~~------~~v~~~~ 78 (250)
T 3nyw_A 21 AVIAAGLATD--GYRVVLIARSKQ---NLEKVHDEIM--------RS---NKHVQEPIVLPLDITDC------TKADTEI 78 (250)
T ss_dssp HHHHHHHHHH--TCEEEEEESCHH---HHHHHHHHHH--------HH---CTTSCCCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHHH--------Hh---ccccCcceEEeccCCCH------HHHHHHH
Confidence 3688999999 999999999532 1122221111 00 00125788999999986 5666555
Q ss_pred c-------CccEEEEcccccCc---c---hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF---D---DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~---~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|++||+||.... . ..++..+++|+.|+..+++++... .+..++|++||..+....
T Consensus 79 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 152 (250)
T 3nyw_A 79 KDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF------ 152 (250)
T ss_dssp HHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred HHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC------
Confidence 4 68999999997422 1 335578999999999999887431 245799999997654310
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
.+. ..|+.||.+.+.+.+.++. .|+++..++||.+..+.
T Consensus 153 ---~~~-----------------------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~----- 195 (250)
T 3nyw_A 153 ---ADG-----------------------------GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM----- 195 (250)
T ss_dssp ---CCT-----------------------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH-----
T ss_pred ---CCC-----------------------------cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch-----
Confidence 111 7899999999988887655 58999999999773311
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
...... ......+++.+|+|++++.++..+.
T Consensus 196 ------------~~~~~~---------~~~~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 196 ------------AKKAGT---------PFKDEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp ------------HHHTTC---------CSCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred ------------hhhcCC---------CcccccCCCHHHHHHHHHHHHcCCC
Confidence 111110 1112347899999999999987654
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=7.9e-11 Score=103.20 Aligned_cols=209 Identities=9% Similarity=-0.001 Sum_probs=133.4
Q ss_pred ChhHHHHHhhCCCcEEEEEE-ccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCC----------
Q psy7539 1 KVLLEKILRTCENVKIYILL-RPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL---------- 69 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~-R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~---------- 69 (318)
++++++|+++ |++|+++. |+.. ..+.+.+.+ + .....++.++.+|++++.-
T Consensus 23 ~aia~~la~~--G~~V~~~~~r~~~---~~~~~~~~l--------~-----~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 23 RSIAEGLHAE--GYAVCLHYHRSAA---EANALSATL--------N-----ARRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCHH---HHHHHHHHH--------H-----HHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred HHHHHHHHHC--CCeEEEEcCCCHH---HHHHHHHHH--------h-----hhcCCeeEEEEeecCCccccccccccccc
Confidence 3688999998 99999999 7421 111121111 0 0123478899999998730
Q ss_pred -CCCHHHHHHHhc-------CccEEEEcccccCc---------------------chhHHHHHHHhHHHHHHHHHHHHhc
Q psy7539 70 -GISAEDRQMLSE-------TIHIVYHIAATVRF---------------------DDYMQTYVFLNTRGTRDMLNLSKQM 120 (318)
Q Consensus 70 -gl~~~~~~~~~~-------~~d~Vih~Aa~~~~---------------------~~~~~~~~~~Nv~gt~~ll~~a~~~ 120 (318)
+...+++..+++ ++|++||+||.... ...+...+++|+.|+..+++++...
T Consensus 85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 164 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 164 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 000004554443 78999999997421 2334568999999999999887632
Q ss_pred ---CC------CccEEEEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHH
Q psy7539 121 ---IH------LQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEG 191 (318)
Q Consensus 121 ---~~------~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 191 (318)
.+ ..+||++||..++... +. ...|+.||.+.+.
T Consensus 165 m~~~~~~~~~~~g~Iv~isS~~~~~~~---------~~-----------------------------~~~Y~asKaa~~~ 206 (291)
T 1e7w_A 165 VAGTPAKHRGTNYSIINMVDAMTNQPL---------LG-----------------------------YTIYTMAKGALEG 206 (291)
T ss_dssp HHTSCGGGSCSCEEEEEECCTTTTSCC---------TT-----------------------------CHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCcEEEEEechhhcCCC---------CC-----------------------------CchhHHHHHHHHH
Confidence 13 4689999997764321 00 1689999999999
Q ss_pred HHHHhhh----cCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCccc-CcchHHHHHHHHHH
Q psy7539 192 VVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCA-DFLPVDVLVNGVLL 266 (318)
Q Consensus 192 ~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~Dva~~~~~ 266 (318)
+.+.+.. +|+.+..++||.+..+. . + . ......+... .+ .. -+...+|+|++++.
T Consensus 207 l~~~la~e~~~~gI~vn~v~PG~v~T~~--------~-~-~-~~~~~~~~~~----~p-----~~~r~~~pedvA~~v~~ 266 (291)
T 1e7w_A 207 LTRSAALELAPLQIRVNGVGPGLSVLVD--------D-M-P-PAVWEGHRSK----VP-----LYQRDSSAAEVSDVVIF 266 (291)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESSBCCGG--------G-S-C-HHHHHHHHTT----CT-----TTTSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCeEEEEEeeCCccCCc--------c-C-C-HHHHHHHHhh----CC-----CCCCCCCHHHHHHHHHH
Confidence 8887654 58999999999774321 0 1 1 1121222211 00 11 36789999999999
Q ss_pred HhhhccCCCCCCCcEEEeeCC
Q psy7539 267 STWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 267 ~~~~~~~~~~~~~~~~ni~~~ 287 (318)
++...... ..+.++++.++
T Consensus 267 l~s~~~~~--itG~~i~vdGG 285 (291)
T 1e7w_A 267 LCSSKAKY--ITGTCVKVDGG 285 (291)
T ss_dssp HHSGGGTT--CCSCEEEESTT
T ss_pred HhCCcccC--ccCcEEEECCC
Confidence 98754321 24778888877
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-11 Score=105.77 Aligned_cols=194 Identities=11% Similarity=0.053 Sum_probs=125.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccC--CCCCCCCCHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV--AVPDLGISAEDRQM 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl--~~~~~gl~~~~~~~ 78 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+. .....+..++.+|+ ++. +++..
T Consensus 28 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~~~d~d~~~~------~~~~~ 83 (247)
T 3i1j_A 28 AAAARAYAAH--GASVVLLGRTEA---SLAEVSDQIK-------------SAGQPQPLIIALNLENATA------QQYRE 83 (247)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH-------------HTTSCCCEEEECCTTTCCH------HHHHH
T ss_pred HHHHHHHHHC--CCEEEEEecCHH---HHHHHHHHHH-------------hcCCCCceEEEeccccCCH------HHHHH
Confidence 3688999998 999999999532 1122221111 11224677788887 543 45555
Q ss_pred Hhc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcc
Q psy7539 79 LSE-------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 79 ~~~-------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~ 140 (318)
+++ ++|++||+||.... ...++..+++|+.|+.++++++... .+..++|++||..+....
T Consensus 84 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-- 161 (247)
T 3i1j_A 84 LAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR-- 161 (247)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC--
T ss_pred HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC--
Confidence 443 78999999997421 2345678999999999999988421 245689999997664321
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEeccccccccc
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G~~ 215 (318)
.+ ...|+.||.+.+.+.+.+.. .++++..++||.+-.+
T Consensus 162 -------~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~- 204 (247)
T 3i1j_A 162 -------AN-----------------------------WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG- 204 (247)
T ss_dssp -------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH-
T ss_pred -------CC-----------------------------cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc-
Confidence 01 17899999999998877654 3678899999966321
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEe
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 284 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni 284 (318)
+...... ......+...+|+|++++.++...... ..++.+++
T Consensus 205 ----------------~~~~~~~---------~~~~~~~~~p~dva~~~~~l~s~~~~~--itG~~i~~ 246 (247)
T 3i1j_A 205 ----------------MRAQAYP---------DENPLNNPAPEDIMPVYLYLMGPDSTG--INGQALNA 246 (247)
T ss_dssp ----------------HHHHHST---------TSCGGGSCCGGGGTHHHHHHHSGGGTT--CCSCEEEC
T ss_pred ----------------cchhccc---------ccCccCCCCHHHHHHHHHHHhCchhcc--ccCeeecC
Confidence 1111111 112234567899999999988754431 13566654
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-11 Score=106.11 Aligned_cols=191 Identities=13% Similarity=0.033 Sum_probs=126.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 21 ~aia~~l~~~--G~~V~~~~r~~~---~~~~~~~~l--------------~~~~~~~~~~~~Dv~~~------~~~~~~~ 75 (247)
T 2jah_A 21 EATARALAAE--GAAVAIAARRVE---KLRALGDEL--------------TAAGAKVHVLELDVADR------QGVDAAV 75 (247)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHH--------------HhcCCcEEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999999531 111111111 11134788999999986 5666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... .+ .+||++||..+....
T Consensus 76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----- 149 (247)
T 2jah_A 76 ASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV----- 149 (247)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC-----
Confidence 4 79999999997421 1345678999999999999887642 13 699999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
.+ ...|+.||.+.+.+.+.... +|+++++++||.+.++...
T Consensus 150 ----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-- 194 (247)
T 2jah_A 150 ----RN-----------------------------AAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRG-- 194 (247)
T ss_dssp ----TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGG--
T ss_pred ----CC-----------------------------CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchh--
Confidence 00 16899999999988877654 5899999999988654211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
..... . ....... .+ .+..++..+|+|++++.++..+.
T Consensus 195 -----~~~~~-~-~~~~~~~----~~----~~~~~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 195 -----HITHT-A-TKEMYEQ----RI----SQIRKLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp -----GCCCH-H-HHHHHHH----HT----TTSCCBCHHHHHHHHHHHHHSCT
T ss_pred -----cccch-h-hHHHHHh----cc----cccCCCCHHHHHHHHHHHhCCCc
Confidence 11111 1 1111110 01 11225899999999999987643
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.5e-11 Score=104.49 Aligned_cols=196 Identities=10% Similarity=0.010 Sum_probs=128.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCH----HHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNS----RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDR 76 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~----~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~ 76 (318)
++++++|+++ |++|+++.|+...... .+.+.+.+ .....++.++.+|++++ +++
T Consensus 20 ~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v 77 (274)
T 3e03_A 20 LAIALRAARD--GANVAIAAKSAVANPKLPGTIHSAAAAV--------------NAAGGQGLALKCDIREE------DQV 77 (274)
T ss_dssp HHHHHHHHHT--TCEEEEEESCCSCCTTSCCCHHHHHHHH--------------HHHTSEEEEEECCTTCH------HHH
T ss_pred HHHHHHHHHC--CCEEEEEeccchhhhhhHHHHHHHHHHH--------------HhcCCeEEEEeCCCCCH------HHH
Confidence 3688999998 9999999998543211 11111110 22245789999999986 566
Q ss_pred HHHhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCc
Q psy7539 77 QMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 77 ~~~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~ 139 (318)
..+++ ++|++||+||.... ...++..+++|+.|+..+.+++... .+..++|++||..+.....
T Consensus 78 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~ 157 (274)
T 3e03_A 78 RAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW 157 (274)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC
Confidence 66554 78999999997421 2345678999999999999987542 2446899999976532100
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
.+ ....|+.||.+.+.+.+.++. +|+++..++||.++...
T Consensus 158 -------------------------------~~-----~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~ 201 (274)
T 3e03_A 158 -------------------------------WG-----AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD 201 (274)
T ss_dssp -------------------------------HH-----HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-
T ss_pred -------------------------------CC-----CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc
Confidence 00 016899999999998887665 58999999998432210
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEE
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVI 282 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ 282 (318)
+. .... ......+...+|+|++++.++...... ..++++
T Consensus 202 ----------~~-------~~~~---------~~~~~~~~~pedvA~~v~~l~s~~~~~--itG~~i 240 (274)
T 3e03_A 202 ----------AI-------NMLP---------GVDAAACRRPEIMADAAHAVLTREAAG--FHGQFL 240 (274)
T ss_dssp --------------------------------CCCGGGSBCTHHHHHHHHHHHTSCCTT--CCSCEE
T ss_pred ----------hh-------hhcc---------cccccccCCHHHHHHHHHHHhCccccc--cCCeEE
Confidence 00 0000 011223678999999999998764431 135555
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.34 E-value=8.9e-13 Score=112.66 Aligned_cols=194 Identities=14% Similarity=0.132 Sum_probs=112.6
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+ + +.+|+++.|+. +++.+. .. ..++.++.+|+++....-.......-+.
T Consensus 20 ~~a~~l~-~--g~~v~~~~r~~------~~~~~~---------------~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (245)
T 3e9n_A 20 EIVKDLS-R--DHIVYALGRNP------EHLAAL---------------AE-IEGVEPIESDIVKEVLEEGGVDKLKNLD 74 (245)
T ss_dssp HHHHHHT-T--TSEEEEEESCH------HHHHHH---------------HT-STTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred HHHHHHh-C--CCeEEEEeCCH------HHHHHH---------------Hh-hcCCcceecccchHHHHHHHHHHHHhcC
Confidence 5777775 3 67899998852 222221 11 2468889999875310000000001123
Q ss_pred CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccccCCCCCCh
Q psy7539 82 TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSP 152 (318)
Q Consensus 82 ~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~ 152 (318)
++|+|||+||..... ..+...+++|+.|+.++++++... .+..++|++||..++.... +
T Consensus 75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~--- 142 (245)
T 3e9n_A 75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP---------G--- 142 (245)
T ss_dssp CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------------------
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC---------C---
Confidence 789999999975321 234568899999988888876431 1126899999977654210 0
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccCCCc
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNING 228 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~ 228 (318)
...|+.||.+.+.+.+.+.. .|+++.+++||.+.++..... ..
T Consensus 143 --------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~~ 189 (245)
T 3e9n_A 143 --------------------------NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGL-------MD 189 (245)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhh-------hh
Confidence 17899999999999987765 589999999998866321110 00
Q ss_pred hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEee
Q psy7539 229 PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 285 (318)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~ 285 (318)
. .........+++++|+|++++.++..+.. +.+||+.
T Consensus 190 ------~---------~~~~~~~~~~~~p~dvA~~i~~l~~~~~~-----~~~~~i~ 226 (245)
T 3e9n_A 190 ------S---------QGTNFRPEIYIEPKEIANAIRFVIDAGET-----TQITNVD 226 (245)
T ss_dssp ---------------------CCGGGSCHHHHHHHHHHHHTSCTT-----EEEEEEE
T ss_pred ------h---------hhcccccccCCCHHHHHHHHHHHHcCCCc-----cceeeeE
Confidence 0 00111223578999999999999988764 6778875
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.34 E-value=8.2e-11 Score=103.66 Aligned_cols=190 Identities=14% Similarity=0.130 Sum_probs=109.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+... ..+.+.++ . .....++.++.+|++++. +.+..+.
T Consensus 26 ~~~a~~L~~~--G~~V~~~~r~~~~--~~~~~~~l-~-------------~~~~~~~~~~~~Dl~~~~-----~~v~~~~ 82 (311)
T 3o26_A 26 FEICKQLSSN--GIMVVLTCRDVTK--GHEAVEKL-K-------------NSNHENVVFHQLDVTDPI-----ATMSSLA 82 (311)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHH-H-------------TTTCCSEEEEECCTTSCH-----HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHH-H-------------hcCCCceEEEEccCCCcH-----HHHHHHH
Confidence 3688999998 9999999996321 11112211 1 122357999999999861 2344333
Q ss_pred -------cCccEEEEcccccCc-------------------------------------chhHHHHHHHhHHHHHHHHHH
Q psy7539 81 -------ETIHIVYHIAATVRF-------------------------------------DDYMQTYVFLNTRGTRDMLNL 116 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~-------------------------------------~~~~~~~~~~Nv~gt~~ll~~ 116 (318)
.++|+|||+||.... .......+++|+.|+..++++
T Consensus 83 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 162 (311)
T 3o26_A 83 DFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEV 162 (311)
T ss_dssp HHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHH
Confidence 379999999997532 122345789999999998888
Q ss_pred HHhc---CCCccEEEEeccccccCCc---cccccc-CCCCCChhHHHHHHhhhcHHHHHHHHHhhhC-CCCCchhHHHHH
Q psy7539 117 SKQM---IHLQLFVYVSTAYCHPKEK---VLEEKT-YPPPVSPHNVIEKAELLSKNELELLKQELLQ-DFPNGYAYTKCL 188 (318)
Q Consensus 117 a~~~---~~~~~~v~~SS~~~~~~~~---~~~E~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~~ 188 (318)
+... .+..+||++||..+..... ...+.. ...................+..+........ .....|+.||.+
T Consensus 163 ~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a 242 (311)
T 3o26_A 163 LIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKAC 242 (311)
T ss_dssp HHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHH
T ss_pred hhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHH
Confidence 7532 2456999999976643210 000000 0000011111111100001110000000000 011579999999
Q ss_pred HHHHHHHhhh--cCCcEEEeccccccc
Q psy7539 189 CEGVVTEYME--AGMPCMILRPSIIIP 213 (318)
Q Consensus 189 ~E~~~~~~~~--~~~~~~ilR~~~v~G 213 (318)
.+.+.+.++. .++.+..++||.|..
T Consensus 243 ~~~~~~~la~e~~~i~v~~v~PG~v~T 269 (311)
T 3o26_A 243 LNAYTRVLANKIPKFQVNCVCPGLVKT 269 (311)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCSBCS
T ss_pred HHHHHHHHHhhcCCceEEEecCCceec
Confidence 9999998877 478999999997744
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-11 Score=107.28 Aligned_cols=211 Identities=14% Similarity=0.106 Sum_probs=133.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+. +++.+.. .....++.++.+|++++ +++..++
T Consensus 19 ~aia~~la~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 70 (281)
T 3zv4_A 19 RALVDRFVAE--GARVAVLDKSA------ERLRELE--------------VAHGGNAVGVVGDVRSL------QDQKRAA 70 (281)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HHTBTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEeCCH------HHHHHHH--------------HHcCCcEEEEEcCCCCH------HHHHHHH
Confidence 3688999998 99999999852 2222221 22235789999999986 4665554
Q ss_pred c-------CccEEEEcccccCcc------------hhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCc
Q psy7539 81 E-------TIHIVYHIAATVRFD------------DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~------------~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~ 139 (318)
+ ++|++||+||..... ..++..+++|+.|+.++++++... .+..++|++||..+....
T Consensus 71 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 149 (281)
T 3zv4_A 71 ERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN- 149 (281)
T ss_dssp HHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS-
T ss_pred HHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC-
Confidence 3 689999999974211 125568899999999999988642 122589999997664321
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccC
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~ 216 (318)
.. ...|+.||.+.+.+.+.++. .++++..+.||.|..+..
T Consensus 150 --------~~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~ 192 (281)
T 3zv4_A 150 --------GG-----------------------------GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLR 192 (281)
T ss_dssp --------SS-----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--C
T ss_pred --------CC-----------------------------CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcc
Confidence 00 16799999999999988765 348999999998865432
Q ss_pred CCCC-CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLP-GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... +..............+.. .....-+...+|+|.+++.++..+... ...+.++++.++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~fL~s~~~~~-~itG~~i~vdGG 254 (281)
T 3zv4_A 193 GPSSLGLSEQSISSVPLADMLKS---------VLPIGRMPALEEYTGAYVFFATRGDSL-PATGALLNYDGG 254 (281)
T ss_dssp CCTTCC--------CCHHHHHHH---------TCTTSSCCCGGGGSHHHHHHHSTTTST-TCSSCEEEESSS
T ss_pred cccccccccccccchhHHHHHHh---------cCCCCCCCCHHHHHHHHHHhhcccccc-cccCcEEEECCC
Confidence 1110 000000000001111111 111234678899999999988733210 124889999887
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.4e-11 Score=108.05 Aligned_cols=186 Identities=17% Similarity=0.107 Sum_probs=126.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCC-----HHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKN-----SRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAED 75 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~-----~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~ 75 (318)
++++++|+++ |++|+++.|+..... ..+...++ .....++.++.+|++++ ++
T Consensus 59 ~aia~~La~~--Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~---------------~~~g~~~~~~~~Dv~d~------~~ 115 (346)
T 3kvo_A 59 KAIALKAAKD--GANIVIAAKTAQPHPKLLGTIYTAAEEI---------------EAVGGKALPCIVDVRDE------QQ 115 (346)
T ss_dssp HHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHH---------------HHTTCEEEEEECCTTCH------HH
T ss_pred HHHHHHHHHC--CCEEEEEECChhhhhhhHHHHHHHHHHH---------------HhcCCeEEEEEccCCCH------HH
Confidence 3688999988 999999999754321 11111111 22245788999999986 56
Q ss_pred HHHHhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCC
Q psy7539 76 RQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKE 138 (318)
Q Consensus 76 ~~~~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~ 138 (318)
+..+++ ++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 116 v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~ 195 (346)
T 3kvo_A 116 ISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV 195 (346)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC
Confidence 666654 79999999997422 2345678999999999999998532 245689999997654320
Q ss_pred cccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEeccccccccc
Q psy7539 139 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 139 ~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~ 215 (318)
. .. ....|+.||.+.+.+.+.++. .++.+..+.||.++..
T Consensus 196 ~-------~~-----------------------------~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T- 238 (346)
T 3kvo_A 196 W-------FK-----------------------------QHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT- 238 (346)
T ss_dssp G-------TS-----------------------------SSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC-
T ss_pred C-------CC-----------------------------CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc-
Confidence 0 00 016899999999999887765 4789999999953221
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhh
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN 270 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~ 270 (318)
.+.. ...+. .....+...+|+|++++.++..
T Consensus 239 ---------------~~~~-~~~~~--------~~~~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 239 ---------------AAMD-MLGGP--------GIESQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp ---------------HHHH-HHCC----------CGGGCBCTHHHHHHHHHHHTS
T ss_pred ---------------HHHH-hhccc--------cccccCCCHHHHHHHHHHHHhc
Confidence 1111 11111 1123466789999999999977
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.33 E-value=2.6e-11 Score=112.64 Aligned_cols=200 Identities=12% Similarity=0.030 Sum_probs=129.8
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |.+|+++.|+.. .+.+.+... ..++.++.+|+++. +++..+++
T Consensus 228 aiA~~La~~--Ga~Vvl~~r~~~----~~~l~~~~~----------------~~~~~~~~~Dvtd~------~~v~~~~~ 279 (454)
T 3u0b_A 228 TIAEVFARD--GATVVAIDVDGA----AEDLKRVAD----------------KVGGTALTLDVTAD------DAVDKITA 279 (454)
T ss_dssp HHHHHHHHT--TCEEEEEECGGG----HHHHHHHHH----------------HHTCEEEECCTTST------THHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEeCCcc----HHHHHHHHH----------------HcCCeEEEEecCCH------HHHHHHHH
Confidence 678899988 999999988632 122222211 11467899999987 35655543
Q ss_pred -------C-ccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 82 -------T-IHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~-~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ +|+|||+||.... ...++..+++|+.|+.++.+++... ....+||++||..+.....
T Consensus 280 ~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~---- 355 (454)
T 3u0b_A 280 HVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR---- 355 (454)
T ss_dssp HHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT----
T ss_pred HHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC----
Confidence 3 9999999998532 2345678999999999999998863 1346899999976542210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
....|+.+|...+.+...+.. +|+++.++.||.+........
T Consensus 356 ----------------------------------g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 401 (454)
T 3u0b_A 356 ----------------------------------GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI 401 (454)
T ss_dssp ----------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------
T ss_pred ----------------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc
Confidence 017899999988777766653 689999999998855321110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ..... .......+...+|+|+++..++...... ..+.++++.++
T Consensus 402 -------~~~~---~~~~~--------~~~~l~r~g~pedvA~~v~fL~s~~a~~--itG~~i~vdGG 449 (454)
T 3u0b_A 402 -------PLAT---REVGR--------RLNSLFQGGQPVDVAELIAYFASPASNA--VTGNTIRVCGQ 449 (454)
T ss_dssp --------------CHHHH--------HSBTTSSCBCHHHHHHHHHHHHCGGGTT--CCSCEEEESSS
T ss_pred -------chhh---HHHHH--------hhccccCCCCHHHHHHHHHHHhCCccCC--CCCcEEEECCc
Confidence 0000 00000 0011223467899999999888754431 24788988876
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-11 Score=106.21 Aligned_cols=150 Identities=13% Similarity=0.095 Sum_probs=106.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 21 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~D~~~~------~~~~~~~ 75 (262)
T 1zem_A 21 LATALRLAEE--GTAIALLDMNRE---ALEKAEASV--------------REKGVEARSYVCDVTSE------EAVIGTV 75 (262)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HTTTSCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HhcCCcEEEEEecCCCH------HHHHHHH
Confidence 3688999998 999999999531 112222111 11234788999999986 5666554
Q ss_pred c-------CccEEEEccccc-Cc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATV-RF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~-~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|+|||+||.. .. ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 151 (262)
T 1zem_A 76 DSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP---- 151 (262)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC----
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----
Confidence 4 789999999964 21 2345678999999999999887642 245699999997664321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
+. ...|+.||.+.+.+.+.+.. .|+++.+++||.+..
T Consensus 152 -----~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t 192 (262)
T 1zem_A 152 -----PN-----------------------------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGP 192 (262)
T ss_dssp -----TT-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred -----CC-----------------------------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCc
Confidence 00 06899999999888877654 589999999997744
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.9e-11 Score=105.26 Aligned_cols=150 Identities=14% Similarity=0.081 Sum_probs=103.4
Q ss_pred ChhHHHHHh---hCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHH
Q psy7539 1 KVLLEKILR---TCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQ 77 (318)
Q Consensus 1 ~~l~~~Ll~---~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~ 77 (318)
++++++|++ + |++|+++.|+.. ..+.+.+.+. . .....++.++.+|++++ +++.
T Consensus 20 ~~ia~~l~~~~~~--G~~V~~~~r~~~---~~~~~~~~l~--------~----~~~~~~~~~~~~Dv~~~------~~v~ 76 (259)
T 1oaa_A 20 RALAPQLARLLSP--GSVMLVSARSES---MLRQLKEELG--------A----QQPDLKVVLAAADLGTE------AGVQ 76 (259)
T ss_dssp HHHHHHHHTTBCT--TCEEEEEESCHH---HHHHHHHHHH--------H----HCTTSEEEEEECCTTSH------HHHH
T ss_pred HHHHHHHHHhhcC--CCeEEEEeCCHH---HHHHHHHHHH--------h----hCCCCeEEEEecCCCCH------HHHH
Confidence 368889988 6 899999999531 1111111110 0 00124688999999986 4565
Q ss_pred HHhc---------Ccc--EEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhcC-----CCccEEEEec
Q psy7539 78 MLSE---------TIH--IVYHIAATVRF----------DDYMQTYVFLNTRGTRDMLNLSKQMI-----HLQLFVYVST 131 (318)
Q Consensus 78 ~~~~---------~~d--~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~~-----~~~~~v~~SS 131 (318)
.+++ .+| ++||+||.... ...++..+++|+.|+.++++++...- +..+||++||
T Consensus 77 ~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS 156 (259)
T 1oaa_A 77 RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS 156 (259)
T ss_dssp HHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred HHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcC
Confidence 5443 357 99999997421 23456789999999999999987531 1246999999
Q ss_pred cccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEeccc
Q psy7539 132 AYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPS 209 (318)
Q Consensus 132 ~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~ 209 (318)
..++... ++ ...|+.||.+.+.+.+.+.. .++++..+.||
T Consensus 157 ~~~~~~~---------~~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG 198 (259)
T 1oaa_A 157 LCALQPY---------KG-----------------------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPG 198 (259)
T ss_dssp GGGTSCC---------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred chhcCCC---------CC-----------------------------ccHHHHHHHHHHHHHHHHHhhCCCceEEEecCC
Confidence 8765321 01 16899999999999988876 35788888888
Q ss_pred cc
Q psy7539 210 II 211 (318)
Q Consensus 210 ~v 211 (318)
.+
T Consensus 199 ~v 200 (259)
T 1oaa_A 199 PL 200 (259)
T ss_dssp SB
T ss_pred Cc
Confidence 66
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1e-10 Score=100.38 Aligned_cols=210 Identities=10% Similarity=0.026 Sum_probs=126.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH-
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML- 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~- 79 (318)
++++++|+++ |++|+++.|+.... +.+.+ + .....++.++ |..+.. ..++.+
T Consensus 15 ~~ia~~l~~~--G~~V~~~~r~~~~~---~~~~~-l--------------~~~~~~~~~~--d~~~v~-----~~~~~~~ 67 (254)
T 1zmt_A 15 MGSALRLSEA--GHTVACHDESFKQK---DELEA-F--------------AETYPQLKPM--SEQEPA-----ELIEAVT 67 (254)
T ss_dssp HHHHHHHHHT--TCEEEECCGGGGSH---HHHHH-H--------------HHHCTTSEEC--CCCSHH-----HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHHH---HHHHH-H--------------HhcCCcEEEE--CHHHHH-----HHHHHHH
Confidence 3688999998 99999999974322 12221 1 1111233333 332210 112222
Q ss_pred --hcCccEEEEccccc-Cc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccC
Q psy7539 80 --SETIHIVYHIAATV-RF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 80 --~~~~d~Vih~Aa~~-~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
+.++|+|||+||.. .. ...++..+++|+.|+.++++++... .+..+||++||..++...
T Consensus 68 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 139 (254)
T 1zmt_A 68 SAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-------- 139 (254)
T ss_dssp HHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC--------
T ss_pred HHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC--------
Confidence 23799999999975 21 1345678999999999999887531 245799999997764321
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCc
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
.+ ...|+.||.+.+.+.+.+.. +|+++++++||.++|+.......
T Consensus 140 -~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~- 188 (254)
T 1zmt_A 140 -KE-----------------------------LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYP- 188 (254)
T ss_dssp -TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCB-
T ss_pred -CC-----------------------------chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCC-
Confidence 01 16899999999999887754 48999999999998754321100
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
++...........+... . ....+.+.+|+|++++.++...... ..+..+++.++
T Consensus 189 T~~~~~~~~~~~~~~~~-------~--p~~~~~~p~dvA~~v~~l~s~~~~~--~tG~~~~vdgG 242 (254)
T 1zmt_A 189 TEPWKTNPEHVAHVKKV-------T--ALQRLGTQKELGELVAFLASGSCDY--LTGQVFWLAGG 242 (254)
T ss_dssp HHHHTTCHHHHHHHHHH-------S--SSSSCBCHHHHHHHHHHHHTTSCGG--GTTCEEEESTT
T ss_pred CcccccChHHHHHHhcc-------C--CCCCCcCHHHHHHHHHHHhCcccCC--ccCCEEEECCC
Confidence 00000000111111110 0 1123678999999999988754321 13788998877
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.30 E-value=1.6e-11 Score=109.50 Aligned_cols=156 Identities=12% Similarity=0.043 Sum_probs=109.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCH-HHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNS-RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~-~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++++++|+++ |++|+++.|....... .+.+...... .....++.++.+|+++. +++..+
T Consensus 16 ~ala~~L~~~--G~~v~~v~r~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~Dv~d~------~~v~~~ 75 (327)
T 1jtv_A 16 LHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARAL------------ACPPGSLETLQLDVRDS------KSVAAA 75 (327)
T ss_dssp HHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHT------------TCCTTSEEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--CCceEEEEeecCcHHHHHHHHHHhhhc------------cCCCCceEEEEecCCCH------HHHHHH
Confidence 3688999988 8888888886433221 1111111000 01124788999999986 678877
Q ss_pred hcC-----ccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 80 SET-----IHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 80 ~~~-----~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
++. +|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 76 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~------ 149 (327)
T 1jtv_A 76 RERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL------ 149 (327)
T ss_dssp HHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC------
T ss_pred HHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC------
Confidence 764 8999999996421 2345678999999999999986321 256799999997764321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccc
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPI 214 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~ 214 (318)
|. ...|+.||.+.+.+.+.+.. .|+++++++||.|...
T Consensus 150 ----~~----------------------------~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~ 191 (327)
T 1jtv_A 150 ----PF----------------------------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191 (327)
T ss_dssp ----TT----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred ----CC----------------------------ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccCh
Confidence 00 16899999999999887754 5899999999988654
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.5e-10 Score=96.60 Aligned_cols=200 Identities=10% Similarity=0.001 Sum_probs=135.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|++. |.+|++..|+....+ .....++..+.+|++++ +++++++
T Consensus 25 ~aia~~la~~--Ga~Vv~~~~~~~~~~-----------------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 73 (242)
T 4b79_A 25 AAIAMQFAEL--GAEVVALGLDADGVH-----------------------APRHPRIRREELDITDS------QRLQRLF 73 (242)
T ss_dssp HHHHHHHHHT--TCEEEEEESSTTSTT-----------------------SCCCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHHHHh-----------------------hhhcCCeEEEEecCCCH------HHHHHHH
Confidence 3578899988 999999999754331 22335788999999986 5677766
Q ss_pred c---CccEEEEcccccCcc-----hhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccccCCCCC
Q psy7539 81 E---TIHIVYHIAATVRFD-----DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEKTYPPPV 150 (318)
Q Consensus 81 ~---~~d~Vih~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~ 150 (318)
+ ++|++||+||..... ..++..+++|+.|+..+.+++..+ .+--++|++||..+.... |
T Consensus 74 ~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~----------~- 142 (242)
T 4b79_A 74 EALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGS----------A- 142 (242)
T ss_dssp HHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCC----------S-
T ss_pred HhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCC----------C-
Confidence 5 789999999975321 346678999999998888877543 122589999998764321 0
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
....|+.||.....+.+..+. +|+++..+-||.+-.+... ..
T Consensus 143 ---------------------------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~-------~~ 188 (242)
T 4b79_A 143 ---------------------------DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGA-------GL 188 (242)
T ss_dssp ---------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC------------
T ss_pred ---------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhh-------cc
Confidence 016899999999988877654 6899999999988443211 11
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.........+.... | ..-+...+|+|.+++.++...... ..+.++.+.++
T Consensus 189 ~~~~~~~~~~~~~~----P-----lgR~g~peeiA~~v~fLaSd~a~~--iTG~~l~VDGG 238 (242)
T 4b79_A 189 KADVEATRRIMQRT----P-----LARWGEAPEVASAAAFLCGPGASF--VTGAVLAVDGG 238 (242)
T ss_dssp CCCHHHHHHHHHTC----T-----TCSCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred cCCHHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCchhcC--ccCceEEECcc
Confidence 12122223332211 1 112567899999999988665432 24788888776
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=4e-10 Score=96.67 Aligned_cols=209 Identities=10% Similarity=0.061 Sum_probs=134.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |.+|++..|+.... +.+.+. .....+..++.+|++++ ++++.+++
T Consensus 22 aia~~la~~--Ga~Vv~~~r~~~~~---~~~~~~---------------~~~~~~~~~~~~Dv~~~------~~v~~~v~ 75 (258)
T 4gkb_A 22 AISMRLAEE--RAIPVVFARHAPDG---AFLDAL---------------AQRQPRATYLPVELQDD------AQCRDAVA 75 (258)
T ss_dssp HHHHHHHHT--TCEEEEEESSCCCH---HHHHHH---------------HHHCTTCEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHc--CCEEEEEECCcccH---HHHHHH---------------HhcCCCEEEEEeecCCH------HHHHHHHH
Confidence 578889988 99999999975542 222222 22345788999999986 46555443
Q ss_pred -------CccEEEEcccccC------cchhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccccC
Q psy7539 82 -------TIHIVYHIAATVR------FDDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~------~~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
++|++||+||... ..+.++..+++|+.|+..+.+++... .+--++|++||..+....
T Consensus 76 ~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~-------- 147 (258)
T 4gkb_A 76 QTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQ-------- 147 (258)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCC--------
T ss_pred HHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCC--------
Confidence 7899999999742 12446678999999998888877542 122589999997764321
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCc
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
| ....|+.||...+.+.+..+. +|+++..+.||.|-.+... .+
T Consensus 148 --~----------------------------~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~---~~ 194 (258)
T 4gkb_A 148 --G----------------------------NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYR---NW 194 (258)
T ss_dssp --S----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC------
T ss_pred --C----------------------------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHh---hh
Confidence 0 016899999999988877654 6899999999988442211 01
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
......+......+.... ....-+...+|+|.+++.++...... ..+.++.+.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~--------plg~R~g~peeiA~~v~fLaS~~a~~--iTG~~i~VDGG 249 (258)
T 4gkb_A 195 IATFEDPEAKLAEIAAKV--------PLGRRFTTPDEIADTAVFLLSPRASH--TTGEWLFVDGG 249 (258)
T ss_dssp --------CHHHHHHTTC--------TTTTSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred hhcccChHHHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHhCchhcC--ccCCeEEECCC
Confidence 001001111122222110 01123667899999999888655431 25888998877
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=7.7e-10 Score=94.14 Aligned_cols=194 Identities=13% Similarity=0.092 Sum_probs=131.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|++. |.+|++..|++ +++.+. .....++.++.+|++++ ++++.++
T Consensus 16 ~aia~~la~~--Ga~V~~~~~~~------~~~~~~---------------~~~~~~~~~~~~Dv~~~------~~v~~~v 66 (247)
T 3ged_A 16 KQICLDFLEA--GDKVCFIDIDE------KRSADF---------------AKERPNLFYFHGDVADP------LTLKKFV 66 (247)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHH---------------HTTCTTEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCH------HHHHHH---------------HHhcCCEEEEEecCCCH------HHHHHHH
Confidence 3678999998 99999999852 233322 12235788999999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++... ++--++|++||..+....
T Consensus 67 ~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~------ 140 (247)
T 3ged_A 67 EYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSE------ 140 (247)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCC------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCC------
Confidence 3 78999999997422 2446779999999998888877542 122589999997764321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
|. ...|+.||.....+.+..+. +++++..+-||.+-.+...
T Consensus 141 ----~~----------------------------~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~---- 184 (247)
T 3ged_A 141 ----PD----------------------------SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ---- 184 (247)
T ss_dssp ----TT----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC------
T ss_pred ----CC----------------------------CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH----
Confidence 10 16899999999988877765 5899999999977322110
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ....... .| ..-+...+|+|.+++.++...- ..++++.+.++
T Consensus 185 ---~~------~~~~~~~----~P-----l~R~g~pediA~~v~fL~s~~~----iTG~~i~VDGG 228 (247)
T 3ged_A 185 ---EF------TQEDCAA----IP-----AGKVGTPKDISNMVLFLCQQDF----ITGETIIVDGG 228 (247)
T ss_dssp ----C------CHHHHHT----ST-----TSSCBCHHHHHHHHHHHHHCSS----CCSCEEEESTT
T ss_pred ---HH------HHHHHhc----CC-----CCCCcCHHHHHHHHHHHHhCCC----CCCCeEEECcC
Confidence 11 1111111 01 1125678999999999886433 25889998877
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.24 E-value=7.8e-11 Score=102.01 Aligned_cols=212 Identities=11% Similarity=-0.013 Sum_probs=131.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+... .+++.. .....++.++.+|++++ +++..++
T Consensus 23 ~aia~~l~~~--G~~V~~~~r~~~~-----~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 75 (269)
T 2h7i_A 23 FHIARVAQEQ--GAQLVLTGFDRLR-----LIQRIT--------------DRLPAKAPLLELDVQNE------EHLASLA 75 (269)
T ss_dssp HHHHHHHHHT--TCEEEEEECSCHH-----HHHHHH--------------TTSSSCCCEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEecChHH-----HHHHHH--------------HhcCCCceEEEccCCCH------HHHHHHH
Confidence 3688999998 9999999995321 111111 11234678899999986 5666665
Q ss_pred c----------CccEEEEcccccCc------------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccC
Q psy7539 81 E----------TIHIVYHIAATVRF------------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPK 137 (318)
Q Consensus 81 ~----------~~d~Vih~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~ 137 (318)
+ ++|++||+||.... ...++..+++|+.|+.++++++... ..-.+||++||....+.
T Consensus 76 ~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~ 155 (269)
T 2h7i_A 76 GRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM 155 (269)
T ss_dssp HHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC
T ss_pred HHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc
Confidence 5 79999999996531 1334568899999999999999753 11248999999654221
Q ss_pred CcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 138 EKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 138 ~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
| ....|+.||.+.+.+.+.+.. +|+++.+++||.+-.
T Consensus 156 -----------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T 196 (269)
T 2h7i_A 156 -----------P----------------------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRT 196 (269)
T ss_dssp -----------T----------------------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred -----------C----------------------------chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccc
Confidence 0 016899999999998887754 589999999997743
Q ss_pred ccCCCCCCcccCCCchH--HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 214 IWKDPLPGWTDNINGPT--GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 214 ~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+.... +........ ............. .+ ..+-+...+|+|++++.++..... ...+.++++.++
T Consensus 197 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~p-~~rr~~~p~dvA~~v~~L~s~~~~--~itG~~i~vdGG 263 (269)
T 2h7i_A 197 LAMSA---IVGGALGEEAGAQIQLLEEGWDQR---AP-IGWNMKDATPVAKTVCALLSDWLP--ATTGDIIYADGG 263 (269)
T ss_dssp HHHHH---HHTTTTCHHHHHHHHHHHHHHHHH---CT-TCCCTTCCHHHHHHHHHHHSSSCT--TCCSEEEEESTT
T ss_pred hhhhc---cccccchhhHHHHHHHHHHhhhcc---CC-cccCCCCHHHHHHHHHHHhCchhc--cCcceEEEecCC
Confidence 21000 000000000 0000000000000 01 111367789999999998865332 124778888776
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.7e-10 Score=95.89 Aligned_cols=207 Identities=12% Similarity=0.079 Sum_probs=133.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|++. |.+|++..|++ +++++..+ .+ .....++.++.+|++++ ++++.++
T Consensus 21 ~aiA~~la~~--Ga~Vv~~~~~~------~~~~~~~~-----~i------~~~g~~~~~~~~Dvt~~------~~v~~~~ 75 (254)
T 4fn4_A 21 RAIAKKFALN--DSIVVAVELLE------DRLNQIVQ-----EL------RGMGKEVLGVKADVSKK------KDVEEFV 75 (254)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHHH-----HH------HHTTCCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHc--CCEEEEEECCH------HHHHHHHH-----HH------HhcCCcEEEEEccCCCH------HHHHHHH
Confidence 3578889888 99999999852 22222211 11 22345788999999987 5666655
Q ss_pred c-------CccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||... + .+.++..+++|+.|+..+.+++... .+--++|++||..+....
T Consensus 76 ~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~---- 151 (254)
T 4fn4_A 76 RRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG---- 151 (254)
T ss_dssp HHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS----
T ss_pred HHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC----
Confidence 3 7899999999632 1 1346679999999998888776542 234589999998764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.||.....+.+..+. +|+++..+-||.|-.+...
T Consensus 152 ------~----------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~- 196 (254)
T 4fn4_A 152 ------F----------------------------AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGL- 196 (254)
T ss_dssp ------S----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTT-
T ss_pred ------C----------------------------CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccc-
Confidence 0 016899999999888877654 6899999999987443211
Q ss_pred CCCcccCCCch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....+ ............ + ..-+...+|+|.+++.++...... ..+.++.+.++
T Consensus 197 ------~~~~~~~~~~~~~~~~~~------~--~~R~g~pediA~~v~fLaSd~a~~--iTG~~i~VDGG 250 (254)
T 4fn4_A 197 ------GSSKPSELGMRTLTKLMS------L--SSRLAEPEDIANVIVFLASDEASF--VNGDAVVVDGG 250 (254)
T ss_dssp ------SCSSCCHHHHHHHHHHHT------T--CCCCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------cccCCcHHHHHHHHhcCC------C--CCCCcCHHHHHHHHHHHhCchhcC--CcCCEEEeCCC
Confidence 11111 111112111100 0 012456799999999888655431 24788888876
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.20 E-value=4.7e-10 Score=106.04 Aligned_cols=205 Identities=10% Similarity=0.031 Sum_probs=133.8
Q ss_pred hhHHHHHhhCCCcE-EEEE-EccCCC-----------CCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCC
Q psy7539 2 VLLEKILRTCENVK-IYIL-LRPKKN-----------KNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPD 68 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~-V~~l-~R~~~~-----------~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~ 68 (318)
++++.|+++ |.+ |+++ .|+... ....+.+.++ .....++.++.+|++++
T Consensus 266 ~lA~~La~~--G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l---------------~~~g~~v~~~~~Dvtd~- 327 (525)
T 3qp9_A 266 EAARRLARD--GAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAEL---------------ADLGATATVVTCDLTDA- 327 (525)
T ss_dssp HHHHHHHHH--TCCEEEEEECCCC---------------CHHHHHHH---------------HHHTCEEEEEECCTTSH-
T ss_pred HHHHHHHHc--CCCEEEEEeCCCCCCccccccccccCHHHHHHHHHH---------------HhcCCEEEEEECCCCCH-
Confidence 678899988 885 6666 676432 1111111111 22345799999999987
Q ss_pred CCCCHHHHHHHhcC------ccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcCC-----CccEEEEe
Q psy7539 69 LGISAEDRQMLSET------IHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIH-----LQLFVYVS 130 (318)
Q Consensus 69 ~gl~~~~~~~~~~~------~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~-----~~~~v~~S 130 (318)
+++..+++. +|+|||+||.... ...+...+++|+.|+.+|.+++... . ..+||++|
T Consensus 328 -----~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~-~~~~~~~~~iV~~S 401 (525)
T 3qp9_A 328 -----EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREA-AAAGGRPPVLVLFS 401 (525)
T ss_dssp -----HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHT-C----CCCEEEEEE
T ss_pred -----HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccc-cccCCCCCEEEEEC
Confidence 678877763 6999999997532 2345678999999999999999875 3 67899999
Q ss_pred ccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccc
Q psy7539 131 TAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSI 210 (318)
Q Consensus 131 S~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~ 210 (318)
|..+..... ....|+.+|...+.+..+....|++++++.||.
T Consensus 402 S~a~~~g~~--------------------------------------g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~ 443 (525)
T 3qp9_A 402 SVAAIWGGA--------------------------------------GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSP 443 (525)
T ss_dssp EGGGTTCCT--------------------------------------TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECC
T ss_pred CHHHcCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 976643210 017899999999998766555799999999997
Q ss_pred cccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCC
Q psy7539 211 IIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDF 290 (318)
Q Consensus 211 v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~ 290 (318)
+-+ ++.........+.+ .....+..+++++++..++..+.. ...+.
T Consensus 444 ~~t-----------gm~~~~~~~~~~~~-----------~g~~~l~pee~a~~l~~~l~~~~~-------~v~v~----- 489 (525)
T 3qp9_A 444 WEG-----------SRVTEGATGERLRR-----------LGLRPLAPATALTALDTALGHGDT-------AVTIA----- 489 (525)
T ss_dssp BTT-----------SGGGSSHHHHHHHH-----------TTBCCBCHHHHHHHHHHHHHHTCS-------EEEEC-----
T ss_pred ccc-----------ccccchhhHHHHHh-----------cCCCCCCHHHHHHHHHHHHhCCCC-------eEEEE-----
Confidence 711 11100011111111 112457789999999999987542 22222
Q ss_pred ceeHHHHHHHHH
Q psy7539 291 QITWYDIIENGK 302 (318)
Q Consensus 291 ~~~~~el~~~i~ 302 (318)
.+.|..+...+.
T Consensus 490 ~~dw~~~~~~~~ 501 (525)
T 3qp9_A 490 DVDWSSFAPGFT 501 (525)
T ss_dssp CBCHHHHHHHHH
T ss_pred eCCHHHHHhhcc
Confidence 356777666554
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.6e-10 Score=108.16 Aligned_cols=189 Identities=11% Similarity=0.041 Sum_probs=128.8
Q ss_pred hhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++.|+++ |. +|+++.|+.......+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 254 alA~~La~~--Ga~~vvl~~R~~~~~~~~~~l~~~l--------------~~~g~~v~~~~~Dvtd~------~~v~~~~ 311 (496)
T 3mje_A 254 RVARRLAEQ--GAAHLVLTSRRGADAPGAAELRAEL--------------EQLGVRVTIAACDAADR------EALAALL 311 (496)
T ss_dssp HHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHH--------------HHTTCEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHC--CCcEEEEEeCCCCChHHHHHHHHHH--------------HhcCCeEEEEEccCCCH------HHHHHHH
Confidence 678899888 88 8888888644333222222211 22345899999999987 6777777
Q ss_pred c------CccEEEEccccc-Cc-------chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccC
Q psy7539 81 E------TIHIVYHIAATV-RF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 81 ~------~~d~Vih~Aa~~-~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
+ .+|+|||+||.. .. ...+...+++|+.|+.++.+++... ...+||++||..+....
T Consensus 312 ~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~SS~a~~~g~-------- 382 (496)
T 3mje_A 312 AELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLFSSGAAVWGS-------- 382 (496)
T ss_dssp HTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTTC--------
T ss_pred HHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEeChHhcCCC--------
Confidence 5 479999999975 21 1335678999999999999999985 77899999996653221
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCC
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
+ ....|+.+|...+.+.......|++++++.||.+.+.. +
T Consensus 383 --~----------------------------g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~g----------m 422 (496)
T 3mje_A 383 --G----------------------------GQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVG----------M 422 (496)
T ss_dssp --T----------------------------TCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSC----------C
T ss_pred --C----------------------------CcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCc----------c
Confidence 0 01689999999999988766689999999999775421 1
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
.........+.+. ....+..++++.++..++..+.
T Consensus 423 ~~~~~~~~~l~~~-----------g~~~l~pe~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 423 ATDPEVHDRLVRQ-----------GVLAMEPEHALGALDQMLENDD 457 (496)
T ss_dssp ------CHHHHHT-----------TEEEECHHHHHHHHHHHHHHTC
T ss_pred ccChHHHHHHHhc-----------CCCCCCHHHHHHHHHHHHcCCC
Confidence 0000111111111 1123567889999999887754
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.1e-10 Score=98.73 Aligned_cols=150 Identities=13% Similarity=0.160 Sum_probs=103.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|+++.|+.. ..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 19 ~~ia~~l~~~--G~~V~~~~r~~~---~~~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 73 (260)
T 2qq5_A 19 RGIALQLCKA--GATVYITGRHLD---TLRVVAQEA--------------QSLGGQCVPVVCDSSQE------SEVRSLF 73 (260)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HHHSSEEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH--------------HHcCCceEEEECCCCCH------HHHHHHH
Confidence 3688999998 999999998521 111111111 11234788999999986 4555443
Q ss_pred --------cCccEEEEccc--cc--------C----cchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccc
Q psy7539 81 --------ETIHIVYHIAA--TV--------R----FDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCH 135 (318)
Q Consensus 81 --------~~~d~Vih~Aa--~~--------~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~ 135 (318)
..+|++||+|| .. . ....++..+++|+.++..+.+++... .+..+||++||..+.
T Consensus 74 ~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 153 (260)
T 2qq5_A 74 EQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSL 153 (260)
T ss_dssp HHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGT
T ss_pred HHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhc
Confidence 35799999994 21 1 11335678888999987777665421 245799999997764
Q ss_pred cCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 136 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
.. .+. ..|+.||.+.+.+.+.+.. +|+++.+++||.+
T Consensus 154 ~~----------~~~-----------------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v 194 (260)
T 2qq5_A 154 QY----------MFN-----------------------------VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIV 194 (260)
T ss_dssp SC----------CSS-----------------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCS
T ss_pred CC----------CCC-----------------------------CchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCcc
Confidence 31 111 6899999999999887754 5899999999988
Q ss_pred ccc
Q psy7539 212 IPI 214 (318)
Q Consensus 212 ~G~ 214 (318)
..+
T Consensus 195 ~T~ 197 (260)
T 2qq5_A 195 QTE 197 (260)
T ss_dssp CTT
T ss_pred ccH
Confidence 653
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=8e-12 Score=111.38 Aligned_cols=120 Identities=11% Similarity=0.055 Sum_probs=85.7
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCC-Cc-cEEEEeccccccCC
Q psy7539 62 GDVAVPDLGISAEDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIH-LQ-LFVYVSTAYCHPKE 138 (318)
Q Consensus 62 gDl~~~~~gl~~~~~~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~-~~v~~SS~~~~~~~ 138 (318)
+|+.+. +.+...++++|+|||+||.... ..+..++++.|+.+|.++++++++. + ++ +|+++|+.....
T Consensus 66 ~di~~~------~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~-~~~~~~vvv~snp~~~~-- 136 (327)
T 1y7t_A 66 AGLEAT------DDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV-AKKDVKVLVVGNPANTN-- 136 (327)
T ss_dssp EEEEEE------SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTCEEEECSSSHHHH--
T ss_pred CCeEec------cChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-cCCCeEEEEeCCchhhh--
Confidence 566543 2466777899999999998643 3455689999999999999999986 4 54 777777643100
Q ss_pred cccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCC
Q psy7539 139 KVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 139 ~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~ 217 (318)
.+..++.. .+.++. +.|+.||+.+|++...+++ .|++.+++|+++|||++..
T Consensus 137 ~~~~~~~~-~~~~p~--------------------------~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 137 ALIAYKNA-PGLNPR--------------------------NFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp HHHHHHTC-TTSCGG--------------------------GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred HHHHHHHc-CCCChh--------------------------heeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 01111111 001111 7899999999999988877 7999999999999997654
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.16 E-value=6.1e-09 Score=89.39 Aligned_cols=206 Identities=13% Similarity=0.000 Sum_probs=133.8
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |.+|++..|++. ..+.+.+... .....++.++.+|++++ +++..+++
T Consensus 23 aiA~~la~~--Ga~Vvi~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~~~Dv~~~------~~v~~~~~ 78 (256)
T 4fs3_A 23 GVAKVLDQL--GAKLVFTYRKER---SRKELEKLLE-------------QLNQPEAHLYQIDVQSD------EEVINGFE 78 (256)
T ss_dssp HHHHHHHHT--TCEEEEEESSGG---GHHHHHHHHG-------------GGTCSSCEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCHH---HHHHHHHHHH-------------hcCCCcEEEEEccCCCH------HHHHHHHH
Confidence 578889988 999999999632 2333333322 12234788999999986 56655543
Q ss_pred -------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVRF-----------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
++|++||+||.... ...+...+++|+.++..+..++... ++--++|++||..+....
T Consensus 79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~---- 154 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV---- 154 (256)
T ss_dssp HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC----
T ss_pred HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc----
Confidence 78999999996421 1223456788999988888877653 122489999997664321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.||...+.+.+..+. +|+++..+.||.+-.+...
T Consensus 155 ------~----------------------------~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~- 199 (256)
T 4fs3_A 155 ------Q----------------------------NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAK- 199 (256)
T ss_dssp ------T----------------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGT-
T ss_pred ------c----------------------------cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhh-
Confidence 1 017899999999988877654 6899999999977443221
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...........+.... | ..-+...+|+|.+++.++...... ..+.++.+.++
T Consensus 200 ------~~~~~~~~~~~~~~~~----P-----l~R~g~peevA~~v~fL~Sd~a~~--iTG~~i~VDGG 251 (256)
T 4fs3_A 200 ------GVGGFNTILKEIKERA----P-----LKRNVDQVEVGKTAAYLLSDLSSG--VTGENIHVDSG 251 (256)
T ss_dssp ------TCTTHHHHHHHHHHHS----T-----TSSCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------hccCCHHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCchhcC--ccCCEEEECcC
Confidence 2222233333333211 1 012456889999999888654431 24788888776
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.16 E-value=3.6e-10 Score=96.65 Aligned_cols=205 Identities=8% Similarity=-0.032 Sum_probs=131.8
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |.+|++..|+.. ...+-.+++ .....++.++.+|++++ ++++.+++
T Consensus 24 aia~~la~~--Ga~Vvi~~~~~~--~~~~~~~~l---------------~~~g~~~~~~~~Dv~~~------~~v~~~~~ 78 (255)
T 4g81_D 24 AYAEGLAAA--GARVILNDIRAT--LLAESVDTL---------------TRKGYDAHGVAFDVTDE------LAIEAAFS 78 (255)
T ss_dssp HHHHHHHHT--TCEEEECCSCHH--HHHHHHHHH---------------HHTTCCEEECCCCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCHH--HHHHHHHHH---------------HhcCCcEEEEEeeCCCH------HHHHHHHH
Confidence 578899998 999999988521 111111111 22235788999999987 56665543
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
++|++||+||.... .+.++..+++|+.|+..+.+++... .+--++|++||..+....
T Consensus 79 ~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~----- 153 (255)
T 4g81_D 79 KLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR----- 153 (255)
T ss_dssp HHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC-----
T ss_pred HHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC-----
Confidence 68999999997422 2456779999999998888776431 234589999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||.....+.+..+. +|+++..+-||.+..+...
T Consensus 154 -----~----------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~-- 198 (255)
T 4g81_D 154 -----P----------------------------TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNT-- 198 (255)
T ss_dssp -----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGH--
T ss_pred -----C----------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhh--
Confidence 1 016899999999988877654 6899999999977442110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.......+...+... .| -+ -+...+|+|.+++.++...... ..+.++.+.++
T Consensus 199 -----~~~~~~~~~~~~~~~----~P---l~--R~g~pediA~~v~fL~S~~a~~--iTG~~i~VDGG 250 (255)
T 4g81_D 199 -----ALIEDKQFDSWVKSS----TP---SQ--RWGRPEELIGTAIFLSSKASDY--INGQIIYVDGG 250 (255)
T ss_dssp -----HHHTCHHHHHHHHHH----ST---TC--SCBCGGGGHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----cccCCHHHHHHHHhC----CC---CC--CCcCHHHHHHHHHHHhCchhCC--CcCCEEEECCC
Confidence 001111111111111 01 01 2455689999998887654431 24788888776
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.1e-09 Score=94.56 Aligned_cols=207 Identities=14% Similarity=0.095 Sum_probs=134.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |.+|++..|+. +++++.. .+...+..++.+|++++ ++++.++
T Consensus 43 ~aiA~~la~~--Ga~V~i~~r~~------~~l~~~~--------------~~~g~~~~~~~~Dv~~~------~~v~~~~ 94 (273)
T 4fgs_A 43 LAAAKRFVAE--GARVFITGRRK------DVLDAAI--------------AEIGGGAVGIQADSANL------AELDRLY 94 (273)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HHHCTTCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHH--------------HHcCCCeEEEEecCCCH------HHHHHHH
Confidence 3678899988 99999999952 2333221 22345788899999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++|++||..+....
T Consensus 95 ~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~------- 167 (273)
T 4fgs_A 95 EKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT------- 167 (273)
T ss_dssp HHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC-------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC-------
Confidence 3 68999999997421 2456789999999999999988753 122479999997664321
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
|. ...|+.||.....+.+..+. +|+++..+-||.+-.+.....
T Consensus 168 ---~~----------------------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~-- 214 (273)
T 4fgs_A 168 ---PA----------------------------FSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVEL-- 214 (273)
T ss_dssp ---TT----------------------------CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC--------
T ss_pred ---CC----------------------------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHh--
Confidence 10 16899999999988877654 689999999997744221100
Q ss_pred cccCCCch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....... ..+...+... .|. .=+...+|+|.+++.++...... ..+.++.+.++
T Consensus 215 -~~~~~~~~~~~~~~~~~~----~Pl-----gR~g~peeiA~~v~FLaSd~a~~--iTG~~i~VDGG 269 (273)
T 4fgs_A 215 -AGKDPVQQQGLLNALAAQ----VPM-----GRVGRAEEVAAAALFLASDDSSF--VTGAELFVDGG 269 (273)
T ss_dssp ----CHHHHHHHHHHHHHH----STT-----SSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -hccCchhhHHHHHHHHhc----CCC-----CCCcCHHHHHHHHHHHhCchhcC--ccCCeEeECcC
Confidence 0000000 1122222221 110 12556899999999988655432 24788888776
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.14 E-value=2e-09 Score=91.26 Aligned_cols=204 Identities=9% Similarity=0.008 Sum_probs=132.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |.+|++..|+... +.++.. .....+..++.+|++++. ..+.++
T Consensus 23 ~aiA~~la~~--Ga~Vvi~~r~~~~----~~~~~~---------------~~~g~~~~~~~~Dv~d~~------~v~~~~ 75 (247)
T 4hp8_A 23 QAIAVGLAAA--GAEVVCAARRAPD----ETLDII---------------AKDGGNASALLIDFADPL------AAKDSF 75 (247)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCCH----HHHHHH---------------HHTTCCEEEEECCTTSTT------TTTTSS
T ss_pred HHHHHHHHHc--CCEEEEEeCCcHH----HHHHHH---------------HHhCCcEEEEEccCCCHH------HHHHHH
Confidence 3578899988 9999999996431 111111 222457889999999873 444444
Q ss_pred c--CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccccccCC
Q psy7539 81 E--TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
+ ++|++||+||.... ...++..+++|+.|+..+.+++... ++--++|++||..+....
T Consensus 76 ~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~--------- 146 (247)
T 4hp8_A 76 TDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG--------- 146 (247)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---------
T ss_pred HhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC---------
Confidence 4 68999999997522 2456779999999999888875431 123589999997764321
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcc
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWT 223 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~ 223 (318)
|. ...|+.||.....+.+..+. +|+++..+-||.+-.+...
T Consensus 147 -~~----------------------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~------ 191 (247)
T 4hp8_A 147 -IR----------------------------VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTE------ 191 (247)
T ss_dssp -SS----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH------
T ss_pred -CC----------------------------ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchh------
Confidence 10 16899999999988877654 6899999999977432110
Q ss_pred cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 224 DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...........+... .| ..=+...+|+|.+++.++...... ..+.++.+.++
T Consensus 192 -~~~~~~~~~~~~~~~----~P-----lgR~g~peeiA~~v~fLaSd~a~~--iTG~~i~VDGG 243 (247)
T 4hp8_A 192 -ALRADAARNKAILER----IP-----AGRWGHSEDIAGAAVFLSSAAADY--VHGAILNVDGG 243 (247)
T ss_dssp -HHHTSHHHHHHHHTT----CT-----TSSCBCTHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred -hcccCHHHHHHHHhC----CC-----CCCCcCHHHHHHHHHHHhCchhcC--CcCCeEEECcc
Confidence 000111112222221 11 112456789999999888665432 24788888776
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=2.5e-10 Score=101.26 Aligned_cols=195 Identities=11% Similarity=0.051 Sum_probs=118.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC---CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK---NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQ 77 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~---~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~ 77 (318)
++++++|+++ |++|++..|..+.. +..+++.+..+ .+ ..... ...+|+++. +++.
T Consensus 23 ~~~a~~La~~--Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~-----~l------~~~~~---~~~~D~~~~------~~~~ 80 (319)
T 1gz6_A 23 RAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVE-----EI------RRRGG---KAVANYDSV------EAGE 80 (319)
T ss_dssp HHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHH-----HH------HHTTC---EEEEECCCG------GGHH
T ss_pred HHHHHHHHHC--CCEEEEEcCCcccccccCCHHHHHHHHH-----HH------HhhCC---eEEEeCCCH------HHHH
Confidence 3688999998 99999976632100 00112221110 01 00011 134788875 2333
Q ss_pred HHh-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcc
Q psy7539 78 MLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 78 ~~~-------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~ 140 (318)
.++ .++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+....
T Consensus 81 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~-- 158 (319)
T 1gz6_A 81 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN-- 158 (319)
T ss_dssp HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC--
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC--
Confidence 332 379999999997532 1345678999999999888887421 256799999996542210
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
.+. ..|+.||.+.+.+...+.. +|+++.+++||.+ ...
T Consensus 159 -------~~~-----------------------------~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~- 200 (319)
T 1gz6_A 159 -------FGQ-----------------------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRM- 200 (319)
T ss_dssp -------TTC-----------------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STT-
T ss_pred -------CCC-----------------------------HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccc-
Confidence 001 6899999999998887654 5899999999965 210
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 286 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~ 286 (318)
...... . ....++..+|+|.+++.++..... ..+.+|++.+
T Consensus 201 ------~~~~~~-~-------------------~~~~~~~p~dvA~~~~~l~s~~~~---~tG~~~~v~G 241 (319)
T 1gz6_A 201 ------TETVMP-E-------------------DLVEALKPEYVAPLVLWLCHESCE---ENGGLFEVGA 241 (319)
T ss_dssp ------TGGGSC-H-------------------HHHHHSCGGGTHHHHHHHTSTTCC---CCSCEEEEET
T ss_pred ------ccccCC-h-------------------hhhccCCHHHHHHHHHHHhCchhh---cCCCEEEECC
Confidence 001000 0 111245788999999988865322 2467777644
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.2e-08 Score=87.60 Aligned_cols=204 Identities=12% Similarity=0.083 Sum_probs=126.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |.+|++..|++... ..+..++.+|++++ ++...++
T Consensus 25 ~aia~~la~~--Ga~V~~~~r~~~~~---------------------------~~~~~~~~~Dv~~~------~~v~~~~ 69 (261)
T 4h15_A 25 AATVSLFLEL--GAQVLTTARARPEG---------------------------LPEELFVEADLTTK------EGCAIVA 69 (261)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCCTT---------------------------SCTTTEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHc--CCEEEEEECCchhC---------------------------CCcEEEEEcCCCCH------HHHHHHH
Confidence 3678899998 99999999964321 12334688999986 4555544
Q ss_pred c-------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++|++||..+....
T Consensus 70 ~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~--- 146 (261)
T 4h15_A 70 EATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPL--- 146 (261)
T ss_dssp HHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---
T ss_pred HHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCC---
Confidence 3 68999999986321 1345678999999998888776532 244589999997653220
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
|. ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+...
T Consensus 147 -------~~---------------------------~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~ 192 (261)
T 4h15_A 147 -------PE---------------------------STTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASV 192 (261)
T ss_dssp -------TT---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH
T ss_pred -------CC---------------------------ccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchh
Confidence 00 016799999999988877654 6899999999977321100
Q ss_pred CCCC-ccc--CC--CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPG-WTD--NI--NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g-~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... +.. .. ......+...... .| ..=+...+|+|.+++.++...... ..+.++++.++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~P-----lgR~g~peevA~~v~fLaS~~a~~--itG~~i~VDGG 256 (261)
T 4h15_A 193 RLAERLAKQAGTDLEGGKKIIMDGLGG----IP-----LGRPAKPEEVANLIAFLASDRAAS--ITGAEYTIDGG 256 (261)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHTTC----CT-----TSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred hhhHHHHHhhccchhhHHHHHHHHhcC----CC-----CCCCcCHHHHHHHHHHHhCchhcC--ccCcEEEECCc
Confidence 0000 000 00 0000011111111 00 112567899999999888654431 24788988877
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.5e-10 Score=97.32 Aligned_cols=153 Identities=7% Similarity=-0.083 Sum_probs=97.9
Q ss_pred CccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCCC
Q psy7539 82 TIHIVYHIAATVRF----------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYPP 148 (318)
Q Consensus 82 ~~d~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~~ 148 (318)
++|+|||+||.... ...++..+++|+.|+.++++++... .+..+||++||..++... +
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~ 142 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL---------A 142 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---------T
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC---------C
Confidence 78999999997533 1345678999999999999887531 245789999997764321 0
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCccc
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTD 224 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~ 224 (318)
. ...|+.||.+.+.+.+.+.. +|+++.+++||.+-.+... .| .
T Consensus 143 ~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---~~-~ 189 (244)
T 1zmo_A 143 Y-----------------------------NPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYF---PT-S 189 (244)
T ss_dssp T-----------------------------CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTB---CH-H
T ss_pred C-----------------------------chHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccc---cc-c
Confidence 1 17899999999999887654 5899999999977442100 00 0
Q ss_pred CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 225 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ......+... .. + ..-+...+|+|++++.++...... ..+..+.+.++
T Consensus 190 ~~~~-~~~~~~~~~~---~~---p--~~r~~~pe~vA~~v~~l~s~~~~~--~tG~~i~vdgG 241 (244)
T 1zmo_A 190 DWEN-NPELRERVDR---DV---P--LGRLGRPDEMGALITFLASRRAAP--IVGQFFAFTGG 241 (244)
T ss_dssp HHHH-CHHHHHHHHH---HC---T--TCSCBCHHHHHHHHHHHHTTTTGG--GTTCEEEESTT
T ss_pred cccc-hHHHHHHHhc---CC---C--CCCCcCHHHHHHHHHHHcCccccC--ccCCEEEeCCC
Confidence 0000 0111111110 00 0 123678999999999988753321 13678887765
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=6.2e-08 Score=84.81 Aligned_cols=151 Identities=11% Similarity=-0.045 Sum_probs=99.3
Q ss_pred CccEEEEcccccC---------cchhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCCCCC
Q psy7539 82 TIHIVYHIAATVR---------FDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVS 151 (318)
Q Consensus 82 ~~d~Vih~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~ 151 (318)
++|++||+||... ....++..+++|+.|+.++++++... ..-.++|++||..+.... |.
T Consensus 119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~----------~~- 187 (297)
T 1d7o_A 119 SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII----------PG- 187 (297)
T ss_dssp CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC----------TT-
T ss_pred CCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCC----------CC-
Confidence 7899999998521 11335678999999999999999863 112589999997664321 10
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
....|+.||.+.+.+.+.+.. +|+++.+++||.+.++.... .
T Consensus 188 --------------------------~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~-------~ 234 (297)
T 1d7o_A 188 --------------------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA-------I 234 (297)
T ss_dssp --------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC-------C
T ss_pred --------------------------cchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhh-------c
Confidence 004799999999988876643 48999999999987643211 1
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.....+........ + ...+...+|+|++++.++...... ..+.++++.++
T Consensus 235 ~~~~~~~~~~~~~~----p-----~~r~~~pedvA~~v~~l~s~~~~~--itG~~i~vdgG 284 (297)
T 1d7o_A 235 GFIDTMIEYSYNNA----P-----IQKTLTADEVGNAAAFLVSPLASA--ITGATIYVDNG 284 (297)
T ss_dssp SHHHHHHHHHHHHS----S-----SCCCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred cccHHHHHHhhccC----C-----CCCCCCHHHHHHHHHHHhCccccC--CCCCEEEECCC
Confidence 11112222221110 0 123568999999999988654321 24788999877
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.92 E-value=7.9e-09 Score=99.55 Aligned_cols=192 Identities=11% Similarity=0.027 Sum_probs=114.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccC-------CCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPK-------KNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISA 73 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~-------~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~ 73 (318)
++++++|+++ |.+|+++.|+. +.....+...++ ...... +.+|+++.
T Consensus 33 ~aiA~~La~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i---------------~~~~~~---~~~D~~d~------ 86 (613)
T 3oml_A 33 REYALLFAER--GAKVVVNDLGGTHSGDGASQRAADIVVDEI---------------RKAGGE---AVADYNSV------ 86 (613)
T ss_dssp HHHHHHHHHT--TCEEEEC--------------CHHHHHHHH---------------HHTTCC---EEECCCCG------
T ss_pred HHHHHHHHHC--CCEEEEEeCCcccccccCCHHHHHHHHHHH---------------HHhCCe---EEEEeCCH------
Confidence 3688999998 99999998832 112221111111 111112 23687765
Q ss_pred HHHHHHhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEecccccc
Q psy7539 74 EDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHP 136 (318)
Q Consensus 74 ~~~~~~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~ 136 (318)
++...+++ .+|++||+||.... ...++..+++|+.|+.++++++... .+..+||++||..+..
T Consensus 87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~ 166 (613)
T 3oml_A 87 IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY 166 (613)
T ss_dssp GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence 34555544 68999999997532 2345678999999999999988321 2456899999976532
Q ss_pred CCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc
Q psy7539 137 KEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII 212 (318)
Q Consensus 137 ~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~ 212 (318)
.. .. ...|+.||.+.+.+.+.++. +|+.+..+.|+.+-
T Consensus 167 ~~---------~~-----------------------------~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t 208 (613)
T 3oml_A 167 GN---------FG-----------------------------QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS 208 (613)
T ss_dssp CC---------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---
T ss_pred CC---------CC-----------------------------ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC
Confidence 21 00 16899999999988887764 58999999998531
Q ss_pred cccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 213 PIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 213 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. . ...... .........+|+|.+++.++..... ..+.++++.++
T Consensus 209 ~-~-------~~~~~~--------------------~~~~~~~~pedvA~~v~~L~s~~~~---~tG~~i~vdGG 252 (613)
T 3oml_A 209 R-M-------TEGILP--------------------DILFNELKPKLIAPVVAYLCHESCE---DNGSYIESAAG 252 (613)
T ss_dssp -----------CCCCC--------------------HHHHTTCCGGGTHHHHHHTTSTTCC---CCSCEEEEETT
T ss_pred h-h-------hhhccc--------------------hhhhhcCCHHHHHHHHHHhcCCCcC---CCceEEEECCC
Confidence 0 0 001110 0112344778999999988866521 24777777543
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.72 E-value=5.6e-08 Score=96.18 Aligned_cols=146 Identities=16% Similarity=0.158 Sum_probs=106.7
Q ss_pred hhHHHHH-hhCCCc-EEEEEEccCCCC-CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH
Q psy7539 2 VLLEKIL-RTCENV-KIYILLRPKKNK-NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 2 ~l~~~Ll-~~~~~~-~V~~l~R~~~~~-~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~ 78 (318)
++++.|+ ++ |. .|+++.|+.... ...+.+.++ .....++.++.+|+++. +++..
T Consensus 545 aiA~~la~~~--Ga~~vvl~~R~~~~~~~~~~~~~~l---------------~~~G~~v~~~~~Dvsd~------~~v~~ 601 (795)
T 3slk_A 545 EVARHLVIER--GVRNLVLVSRRGPAASGAAELVAQL---------------TAYGAEVSLQACDVADR------ETLAK 601 (795)
T ss_dssp HHHHHHHHTS--SCCEEEEEESSGGGSTTHHHHHHHH---------------HHTTCEEEEEECCTTCH------HHHHH
T ss_pred HHHHHHHHHc--CCcEEEEeccCccchHHHHHHHHHH---------------HhcCCcEEEEEeecCCH------HHHHH
Confidence 5778888 56 88 699999974333 333333322 22245789999999987 67777
Q ss_pred Hhc------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCccccccc
Q psy7539 79 LSE------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 79 ~~~------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+++ .+|+|||+||.... .+.++..+++|+.|+.++.+++. +.. +||++||..+....
T Consensus 602 ~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~--~~l-~iV~~SS~ag~~g~------- 671 (795)
T 3slk_A 602 VLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID--PDV-ALVLFSSVSGVLGS------- 671 (795)
T ss_dssp HHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC--TTS-EEEEEEETHHHHTC-------
T ss_pred HHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh--hCC-EEEEEccHHhcCCC-------
Confidence 765 46999999998532 13456788999999999999984 345 89999997664221
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEeccccc
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSII 211 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v 211 (318)
| ....|+.+|...+.+..+....|++++.+-||.+
T Consensus 672 ---~----------------------------g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v 706 (795)
T 3slk_A 672 ---G----------------------------GQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPW 706 (795)
T ss_dssp ---S----------------------------SCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred ---C----------------------------CCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeE
Confidence 0 0178999999888888777668999999999966
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=8e-07 Score=93.25 Aligned_cols=218 Identities=10% Similarity=0.015 Sum_probs=128.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|+++ |++|+++.|+.. ....+...++.. +. .....++.++.+|+++. +++..+++
T Consensus 668 aIAr~LA~~--GA~VVl~~~R~~-~~l~~~a~eL~~---------el--~~~G~~v~~v~~DVsd~------esV~alv~ 727 (1878)
T 2uv9_A 668 EVLQGLLSG--GAKVIVTTSRFS-RQVTEYYQGIYA---------RC--GARGSQLVVVPFNQGSK------QDVEALVN 727 (1878)
T ss_dssp HHHHHHHHT--TCEEEEEESSCC-HHHHHHHHHHHH---------HH--CCTTCEEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEecCCh-HHHHHHHHHHHH---------Hh--hccCCeEEEEEcCCCCH------HHHHHHHH
Confidence 688999988 999988865322 111111111100 00 11234788999999986 56666542
Q ss_pred -----------CccEEEEcccccCcc----------hhHHHHHHHhHHHHHHHHHHHHhcCC-----CccEEEEeccccc
Q psy7539 82 -----------TIHIVYHIAATVRFD----------DYMQTYVFLNTRGTRDMLNLSKQMIH-----LQLFVYVSTAYCH 135 (318)
Q Consensus 82 -----------~~d~Vih~Aa~~~~~----------~~~~~~~~~Nv~gt~~ll~~a~~~~~-----~~~~v~~SS~~~~ 135 (318)
.+|+|||+||..... ..+...+++|+.|+.+++++++..+. ..+||++||..+.
T Consensus 728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~ 807 (1878)
T 2uv9_A 728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT 807 (1878)
T ss_dssp HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence 489999999975321 33567899999999998877432111 2489999997653
Q ss_pred cCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccc
Q psy7539 136 PKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSII 211 (318)
Q Consensus 136 ~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v 211 (318)
... ...|+.||...+.+...+.. .+++++.+.||.+
T Consensus 808 ~gg----------------------------------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V 847 (1878)
T 2uv9_A 808 FGN----------------------------------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWT 847 (1878)
T ss_dssp SSC----------------------------------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCB
T ss_pred cCC----------------------------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecce
Confidence 210 17899999999998765432 2388888999977
Q ss_pred ccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc-CCCCCCCcEEEee--CCC
Q psy7539 212 IPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL-SNPGNTMRVINLT--ANK 288 (318)
Q Consensus 212 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~-~~~~~~~~~~ni~--~~~ 288 (318)
-|. .+............. . ..-+...+|+|.+++.++.... .. ..+..+.+. ++.
T Consensus 848 ~gT----------~m~~~~~~~~~~~~~-------~---plr~~sPeEVA~avlfLaSd~a~s~--iTGq~I~VDVDGG~ 905 (1878)
T 2uv9_A 848 RGT----------GLMSANNLVAEGVEK-------L---GVRTFSQQEMAFNLLGLMAPAIVNL--CQSDPVFADLNGGL 905 (1878)
T ss_dssp CCT----------TSCSHHHHTHHHHHT-------T---TCCCBCHHHHHHHHHHHHSHHHHHH--HTTSCEEEEESCSG
T ss_pred ecC----------cccccchhhHHHHHh-------c---CCCCCCHHHHHHHHHHHhCCccccc--ccCcEEEEEcCCCc
Confidence 421 111111111111111 0 1123478999999998876543 10 025666663 331
Q ss_pred CCceeHHHHHHHH
Q psy7539 289 DFQITWYDIIENG 301 (318)
Q Consensus 289 ~~~~~~~el~~~i 301 (318)
.....+.++...+
T Consensus 906 ~~~~~l~el~~~l 918 (1878)
T 2uv9_A 906 QFIPDLKGLMTKL 918 (1878)
T ss_dssp GGCTTHHHHHHHH
T ss_pred cccCCHHHHHHHH
Confidence 1223455555443
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.62 E-value=2.8e-07 Score=81.90 Aligned_cols=167 Identities=9% Similarity=0.002 Sum_probs=100.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCC-CCHH------
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLG-ISAE------ 74 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~g-l~~~------ 74 (318)
+++++|+++ |++|++..|+.... ...|-.+..+. ........ ......+.++.+|+++.... ++.+
T Consensus 19 aiA~~la~~--G~~Vv~~~~~~~~~-l~~r~~~~~~~--~~~~~~~~--~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 91 (329)
T 3lt0_A 19 GIAKELSKR--NVKIIFGIWPPVYN-IFMKNYKNGKF--DNDMIIDK--DKKMNILDMLPFDASFDTANDIDEETKNNKR 91 (329)
T ss_dssp HHHHHHHHT--TCEEEEEECHHHHH-HHHHHHHTTTT--TGGGBCSS--SCBCCEEEEEECCTTCSSGGGCCHHHHTSHH
T ss_pred HHHHHHHHC--CCEEEEEecCcccc-ccccchHHHHH--HHHHHHhh--cccccccccccccccccchhhhhhhhccccc
Confidence 688999998 99999777642100 00000000000 00000000 11123478889998875211 1111
Q ss_pred -------HHHHHh-------cCccEEEEcccccC---------cchhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEe
Q psy7539 75 -------DRQMLS-------ETIHIVYHIAATVR---------FDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVS 130 (318)
Q Consensus 75 -------~~~~~~-------~~~d~Vih~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~S 130 (318)
++..++ ..+|++||+||... ....+...+++|+.|+..+.+++... ..-.++|++|
T Consensus 92 ~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~is 171 (329)
T 3lt0_A 92 YNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLT 171 (329)
T ss_dssp HHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 233322 36899999999521 12345678999999999999998753 1114899999
Q ss_pred ccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCC-chhHHHHHHHHHHHHhhh-----cCCcEE
Q psy7539 131 TAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPN-GYAYTKCLCEGVVTEYME-----AGMPCM 204 (318)
Q Consensus 131 S~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~-----~~~~~~ 204 (318)
|..+.... |. .. .|+.||.+.+.+.+.... +|+.+.
T Consensus 172 S~~~~~~~----------~~----------------------------~~~~Y~asKaal~~~~~~la~el~~~~gI~vn 213 (329)
T 3lt0_A 172 YHASQKVV----------PG----------------------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRIN 213 (329)
T ss_dssp CGGGTSCC----------TT----------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred CccccCCC----------Cc----------------------------chHHHHHHHHHHHHHHHHHHHHhCCccCeEEE
Confidence 97664321 10 13 899999999988776543 389999
Q ss_pred Eeccccccc
Q psy7539 205 ILRPSIIIP 213 (318)
Q Consensus 205 ilR~~~v~G 213 (318)
.+.||.|-.
T Consensus 214 ~v~PG~v~T 222 (329)
T 3lt0_A 214 TISAGPLKS 222 (329)
T ss_dssp EEEECCCCC
T ss_pred EEecceeec
Confidence 999998854
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.59 E-value=7.6e-07 Score=78.72 Aligned_cols=157 Identities=11% Similarity=-0.045 Sum_probs=82.5
Q ss_pred CccEEEEcccccC---------cchhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCCCCC
Q psy7539 82 TIHIVYHIAATVR---------FDDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVS 151 (318)
Q Consensus 82 ~~d~Vih~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~ 151 (318)
.+|++||+||... ....++..+++|+.|+.++++++... ..-.+||++||..+.... |.
T Consensus 133 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----------~~- 201 (319)
T 2ptg_A 133 QIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI----------PG- 201 (319)
T ss_dssp CEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------
T ss_pred CCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc----------Cc-
Confidence 7899999998531 11335678999999999999999863 112589999997653210 00
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
....|+.||.+.+.+.+.++. +|+++.+++||.|-.+....... .
T Consensus 202 --------------------------~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~---~- 251 (319)
T 2ptg_A 202 --------------------------YGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGK---A- 251 (319)
T ss_dssp -------------------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC--------------
T ss_pred --------------------------cchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhccc---c-
Confidence 004799999998888766543 48999999999875432110000 0
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....+...... .+ .......-+...+|+|++++.++...... ..+.++.+.++
T Consensus 252 -~~~~~~~~~~~----~~-~~~~p~~r~~~peevA~~v~~L~s~~~~~--itG~~i~vdGG 304 (319)
T 2ptg_A 252 -GDKTFIDLAID----YS-EANAPLQKELESDDVGRAALFLLSPLARA--VTGATLYVDNG 304 (319)
T ss_dssp ---------------------------CCCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred -cchhhHHHHHH----HH-hccCCCCCCCCHHHHHHHHHHHhCcccCC--ccCCEEEECCC
Confidence 00000000000 00 00001123568899999999988754321 24788888777
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.1e-06 Score=77.50 Aligned_cols=156 Identities=10% Similarity=-0.071 Sum_probs=95.4
Q ss_pred CccEEEEcccccC-----c----chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCCCCC
Q psy7539 82 TIHIVYHIAATVR-----F----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVS 151 (318)
Q Consensus 82 ~~d~Vih~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~ 151 (318)
++|++||+||... + ...++..+++|+.|+.++++++... ..-.+||++||..+.... |.
T Consensus 120 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----------~~- 188 (315)
T 2o2s_A 120 NIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVV----------PG- 188 (315)
T ss_dssp SEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCC----------TT-
T ss_pred CCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccC----------CC-
Confidence 7999999998531 1 1335678999999999999999753 011589999997664321 10
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
....|+.||.+.+.+.+.++. +|+++..++||.|-.+....... ...
T Consensus 189 --------------------------~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~--~~~ 240 (315)
T 2o2s_A 189 --------------------------YGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGK--SGE 240 (315)
T ss_dssp --------------------------CCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTC--SSS
T ss_pred --------------------------ccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccc--ccc
Confidence 004799999999988876543 48999999999774421100000 000
Q ss_pred Cch-HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 227 NGP-TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 227 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... ..+...+... . + ..-+...+|+|++++.++...... ..+..+.+.++
T Consensus 241 ~~~~~~~~~~~~~~----~---p--~~r~~~pedvA~~v~~L~s~~~~~--itG~~i~vdGG 291 (315)
T 2o2s_A 241 KSFIDYAIDYSYNN----A---P--LRRDLHSDDVGGAALFLLSPLARA--VSGVTLYVDNG 291 (315)
T ss_dssp SCHHHHHHHHHHHH----S---S--SCCCCCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred chhHHHHHHHHhcc----C---C--CCCCCCHHHHHHHHHHHhCchhcc--CcCCEEEECCC
Confidence 000 0111111110 0 0 113568899999999988754321 24778888776
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.45 E-value=4e-07 Score=93.06 Aligned_cols=151 Identities=14% Similarity=0.087 Sum_probs=98.4
Q ss_pred hhHHHHHhhCCCcEEEEEE-ccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCENVKIYILL-RPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~-R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++.|+++ |++|+++. |+..... +...++ ..+. .....++.++.+|+++. +++..++
T Consensus 492 AIAr~LA~~--GA~VVL~~~R~~e~le--e~a~eL---------~ael--~a~Ga~V~vV~~DVTD~------esVeaLV 550 (1688)
T 2pff_A 492 EVLQGLLQG--GAKVVVTTSRFSKQVT--DYYQSI---------YAKY--GAKGSTLIVVPFNQGSK------QDVEALI 550 (1688)
T ss_dssp HHHHHHHHH--TCEEEEEESSCSTTTT--THHHHT---------TTTT--CCTTCEEEEEECCSSST------THHHHHH
T ss_pred HHHHHHHHC--cCEEEEEeCCCHHHHH--HHHHHH---------HHHh--hcCCCeEEEEEeCCCCH------HHHHHHH
Confidence 688999999 99998884 5432221 111111 0000 11134788999999987 3566554
Q ss_pred c-------------CccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhcCC-----CccEEEEecc
Q psy7539 81 E-------------TIHIVYHIAATVRF----------DDYMQTYVFLNTRGTRDMLNLSKQMIH-----LQLFVYVSTA 132 (318)
Q Consensus 81 ~-------------~~d~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~~~-----~~~~v~~SS~ 132 (318)
+ .+|+|||+||.... ...+...+++|+.|+..++++++..+. -.+||++||.
T Consensus 551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSi 630 (1688)
T 2pff_A 551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN 630 (1688)
T ss_dssp HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSC
T ss_pred HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEECh
Confidence 2 48999999997422 123456889999999999998732211 1479999997
Q ss_pred ccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHh-hh---cCCcEEEecc
Q psy7539 133 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEY-ME---AGMPCMILRP 208 (318)
Q Consensus 133 ~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~-~~---~~~~~~ilR~ 208 (318)
.+.... ...|+.||.+.+.++... .+ .++++..+.|
T Consensus 631 AG~~Gg----------------------------------------~saYaASKAAL~aLttrsLAeEla~~IRVNaVaP 670 (1688)
T 2pff_A 631 HGTFGG----------------------------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAII 670 (1688)
T ss_dssp TTTSSC----------------------------------------BTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCC
T ss_pred HhccCC----------------------------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 653210 178999999999984443 33 1367777888
Q ss_pred ccccc
Q psy7539 209 SIIIP 213 (318)
Q Consensus 209 ~~v~G 213 (318)
|.+-|
T Consensus 671 G~V~T 675 (1688)
T 2pff_A 671 GWTRG 675 (1688)
T ss_dssp CCCCC
T ss_pred CcCcC
Confidence 87753
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.6e-06 Score=91.28 Aligned_cols=152 Identities=13% Similarity=0.060 Sum_probs=100.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|++. |++|+++.+... ....+...++. .+. .....++.++.+|+++. +++..+++
T Consensus 691 aIA~~La~~--GA~Vvl~~~R~~-~~l~~~~~eL~---------~~~--~~~g~~v~~v~~DVsd~------~sV~alv~ 750 (1887)
T 2uv8_A 691 EVLQGLLQG--GAKVVVTTSRFS-KQVTDYYQSIY---------AKY--GAKGSTLIVVPFNQGSK------QDVEALIE 750 (1887)
T ss_dssp HHHHHHHHT--TCEEEEEESSCC-HHHHHHHHHHH---------HHH--CCTTCEEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEecCCH-HHHHHHHHHHH---------HHh--hcCCCeEEEEEecCCCH------HHHHHHHH
Confidence 688999988 999998854321 11111111110 000 11234788999999986 56665542
Q ss_pred -------------CccEEEEcccccCcc----------hhHHHHHHHhHHHHHHHHHHHHhcCC-----CccEEEEeccc
Q psy7539 82 -------------TIHIVYHIAATVRFD----------DYMQTYVFLNTRGTRDMLNLSKQMIH-----LQLFVYVSTAY 133 (318)
Q Consensus 82 -------------~~d~Vih~Aa~~~~~----------~~~~~~~~~Nv~gt~~ll~~a~~~~~-----~~~~v~~SS~~ 133 (318)
.+|++||+||..... ..+...+++|+.|+..+++++...+. -.+||++||..
T Consensus 751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a 830 (1887)
T 2uv8_A 751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH 830 (1887)
T ss_dssp HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence 489999999975221 23467899999999999998843222 14899999976
Q ss_pred cccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHH-HHHhhh---cCCcEEEeccc
Q psy7539 134 CHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGV-VTEYME---AGMPCMILRPS 209 (318)
Q Consensus 134 ~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~---~~~~~~ilR~~ 209 (318)
+.... ...|+.||...+.+ ...... ..++++.+.||
T Consensus 831 g~~gg----------------------------------------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG 870 (1887)
T 2uv8_A 831 GTFGG----------------------------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIG 870 (1887)
T ss_dssp TCSSC----------------------------------------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEEC
T ss_pred hccCC----------------------------------------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEec
Confidence 53210 17899999999998 444433 13888999999
Q ss_pred cccc
Q psy7539 210 IIIP 213 (318)
Q Consensus 210 ~v~G 213 (318)
.|-|
T Consensus 871 ~V~t 874 (1887)
T 2uv8_A 871 WTRG 874 (1887)
T ss_dssp CEEC
T ss_pred cccc
Confidence 8853
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=1.6e-05 Score=71.54 Aligned_cols=155 Identities=8% Similarity=-0.066 Sum_probs=99.4
Q ss_pred hhHHHHHh-hCCCcEEEEEEccCCCCCH---------HHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCC
Q psy7539 2 VLLEKILR-TCENVKIYILLRPKKNKNS---------RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGI 71 (318)
Q Consensus 2 ~l~~~Ll~-~~~~~~V~~l~R~~~~~~~---------~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl 71 (318)
++++.|++ . |.+|+++.|+...... .+.+.+.. .....+...+.+|++++
T Consensus 62 AiA~~LA~g~--GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~--------------~~~G~~a~~i~~Dvtd~---- 121 (405)
T 3zu3_A 62 AARITAAFGC--GADTLGVFFERPGEEGKPGTSGWYNSAAFHKFA--------------AQKGLYAKSINGDAFSD---- 121 (405)
T ss_dssp HHHHHHHHHH--CCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHH--------------HHTTCCEEEEESCTTSH----
T ss_pred HHHHHHHHhc--CCEEEEEeCCchhhhhhcccccchhHHHHHHHH--------------HhcCCceEEEECCCCCH----
Confidence 57888999 8 9999999887543221 01111110 11234678899999986
Q ss_pred CHHHHHHHhc-------CccEEEEccccc----------------C-------------------------cchhHHHHH
Q psy7539 72 SAEDRQMLSE-------TIHIVYHIAATV----------------R-------------------------FDDYMQTYV 103 (318)
Q Consensus 72 ~~~~~~~~~~-------~~d~Vih~Aa~~----------------~-------------------------~~~~~~~~~ 103 (318)
+++..+++ ++|++||+||.. . ....++..+
T Consensus 122 --~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v 199 (405)
T 3zu3_A 122 --EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTV 199 (405)
T ss_dssp --HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHH
Confidence 46655543 689999999863 0 012345577
Q ss_pred HHhHHHHH-HHHHHHHhcC---CCccEEEEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCC
Q psy7539 104 FLNTRGTR-DMLNLSKQMI---HLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFP 179 (318)
Q Consensus 104 ~~Nv~gt~-~ll~~a~~~~---~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (318)
++|..++. .++.++.... +--++|++||...... .|.. +.
T Consensus 200 ~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~----------~p~~--------------------------~~ 243 (405)
T 3zu3_A 200 AVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT----------HDIY--------------------------WN 243 (405)
T ss_dssp HHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG----------TTTT--------------------------TT
T ss_pred HhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc----------CCCc--------------------------cc
Confidence 77877765 5555544311 1147999999765321 0100 11
Q ss_pred CchhHHHHHHHHHHHHhhh----c-CCcEEEecccccccc
Q psy7539 180 NGYAYTKCLCEGVVTEYME----A-GMPCMILRPSIIIPI 214 (318)
Q Consensus 180 ~~Y~~sK~~~E~~~~~~~~----~-~~~~~ilR~~~v~G~ 214 (318)
..|+.||...+.+.+..+. + |+++.++-||.+-..
T Consensus 244 ~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 244 GSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred hHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence 6899999999988877654 6 899999999987543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.32 E-value=2.3e-06 Score=82.09 Aligned_cols=209 Identities=14% Similarity=0.059 Sum_probs=127.8
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccC-CCCCCCCCHHHHHHH-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDV-AVPDLGISAEDRQML- 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl-~~~~~gl~~~~~~~~- 79 (318)
++++.|+++ |.+|++..|.. . .+...++ .....++..+.+|+ ++.. ..++.+
T Consensus 337 a~A~~la~~--Ga~Vv~~~~~~--~--~~~~~~i---------------~~~g~~~~~~~~Dv~~~~~-----~~~~~~~ 390 (604)
T 2et6_A 337 EYAKWFAKY--GAKVVVNDFKD--A--TKTVDEI---------------KAAGGEAWPDQHDVAKDSE-----AIIKNVI 390 (604)
T ss_dssp HHHHHHHHT--TCEEEEECSSC--C--HHHHHHH---------------HHTTCEEEEECCCHHHHHH-----HHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEeCcc--H--HHHHHHH---------------HhcCCeEEEEEcChHHHHH-----HHHHHHH
Confidence 578889988 99999887632 1 1111111 11123566778888 4321 122222
Q ss_pred --hcCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCC
Q psy7539 80 --SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 80 --~~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
+..+|++||+||.... ...++..+++|+.|+..+.+++... .+-.++|++||..+....
T Consensus 391 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~--------- 461 (604)
T 2et6_A 391 DKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN--------- 461 (604)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC---------
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC---------
Confidence 3479999999997422 1345678999999998888876532 233589999997653210
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcc
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWT 223 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~ 223 (318)
|. ...|+.||.....+.+..+. +|+++..+.||. . ++. .
T Consensus 462 -~~----------------------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~--~---T~m---~ 504 (604)
T 2et6_A 462 -FG----------------------------QANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA--E---TAM---T 504 (604)
T ss_dssp -TT----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC--C---CCC----
T ss_pred -CC----------------------------ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC--C---Ccc---c
Confidence 00 06899999999988877654 689999999982 1 110 0
Q ss_pred cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCC---------------
Q psy7539 224 DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANK--------------- 288 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~--------------- 288 (318)
..... . ........+|+|.+++.++..... ..+.++.+.++.
T Consensus 505 ~~~~~-------------~-------~~~~~~~pe~vA~~v~~L~s~~~~---itG~~~~vdGG~~~~~~~~~~~~~~~~ 561 (604)
T 2et6_A 505 LSIMR-------------E-------QDKNLYHADQVAPLLVYLGTDDVP---VTGETFEIGGGWIGNTRWQRAKGAVSH 561 (604)
T ss_dssp ----------------------------CCSSCGGGTHHHHHHTTSTTCC---CCSCEEEEETTEEEEEEEEECCCEECC
T ss_pred cccCc-------------h-------hhccCCCHHHHHHHHHHHhCCccC---CCCcEEEECCCeeEeeeeeccccccCC
Confidence 00000 0 011234678899988887754332 246677765540
Q ss_pred CCceeHHHHHHHHHHhh
Q psy7539 289 DFQITWYDIIENGKDIA 305 (318)
Q Consensus 289 ~~~~~~~el~~~i~~~~ 305 (318)
...++..++.+...+..
T Consensus 562 ~~~~~~~~~~~~~~~i~ 578 (604)
T 2et6_A 562 DEHTTVEFIKEHLNEIT 578 (604)
T ss_dssp SSSCCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHh
Confidence 12467888888877766
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.5e-05 Score=70.90 Aligned_cols=154 Identities=9% Similarity=-0.070 Sum_probs=96.4
Q ss_pred hhHHHHHh-hCCCcEEEEEEccCCCCCH---------HHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCC
Q psy7539 2 VLLEKILR-TCENVKIYILLRPKKNKNS---------RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGI 71 (318)
Q Consensus 2 ~l~~~Ll~-~~~~~~V~~l~R~~~~~~~---------~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl 71 (318)
++++.|++ . |.+|++..|+...... .+.+.+.. .....+...+.+|++++
T Consensus 76 AiA~~LA~~~--GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~--------------~~~G~~a~~i~~Dvtd~---- 135 (422)
T 3s8m_A 76 ASRITAAFGF--GADTLGVFFEKPGTASKAGTAGWYNSAAFDKHA--------------KAAGLYSKSINGDAFSD---- 135 (422)
T ss_dssp HHHHHHHHHH--CCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHH--------------HHTTCCEEEEESCTTSH----
T ss_pred HHHHHHHHhC--CCEEEEEeCCchhhhhhhcccccchhHHHHHHH--------------HhcCCcEEEEEecCCCH----
Confidence 57888998 8 9999999987543321 01111110 11234678899999986
Q ss_pred CHHHHHHHh--------cCccEEEEccccc----------------Cc-------------------------chhHHHH
Q psy7539 72 SAEDRQMLS--------ETIHIVYHIAATV----------------RF-------------------------DDYMQTY 102 (318)
Q Consensus 72 ~~~~~~~~~--------~~~d~Vih~Aa~~----------------~~-------------------------~~~~~~~ 102 (318)
+..+.++ .++|++||+||.. .. ...++..
T Consensus 136 --~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~ 213 (422)
T 3s8m_A 136 --AARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDT 213 (422)
T ss_dssp --HHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHH
T ss_pred --HHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHH
Confidence 4554433 4689999999861 00 1223445
Q ss_pred HHHhHHHHH-HHHHHHHhcC---CCccEEEEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCC
Q psy7539 103 VFLNTRGTR-DMLNLSKQMI---HLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDF 178 (318)
Q Consensus 103 ~~~Nv~gt~-~ll~~a~~~~---~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (318)
+++|..++. .++.++.... +--++|++||..+.... +.. +
T Consensus 214 v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~---------------------------------p~~---~ 257 (422)
T 3s8m_A 214 ITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW---------------------------------PIY---W 257 (422)
T ss_dssp HHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH---------------------------------HHH---T
T ss_pred HHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC---------------------------------CCc---c
Confidence 666665554 5566654311 11379999997653210 000 0
Q ss_pred CCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccc
Q psy7539 179 PNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIP 213 (318)
Q Consensus 179 ~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G 213 (318)
...|+.||...+.+.+..+. +|+++.++.||.|-.
T Consensus 258 ~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T 296 (422)
T 3s8m_A 258 HGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVT 296 (422)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcC
Confidence 15799999999988877654 689999999998754
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.17 E-value=1.1e-05 Score=77.51 Aligned_cols=91 Identities=13% Similarity=0.093 Sum_probs=66.7
Q ss_pred cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCCCCC
Q psy7539 81 ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYPPPV 150 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~ 150 (318)
..+|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++|++||..+.... |.
T Consensus 90 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~----------~~ 159 (604)
T 2et6_A 90 GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN----------FG 159 (604)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------TT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC----------CC
Confidence 479999999997421 1345679999999998888876532 133589999997653210 00
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccc
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPS 209 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~ 209 (318)
...|+.||.....+.+..+. +|+++..+.|+
T Consensus 160 ----------------------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 160 ----------------------------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp ----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred ----------------------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 16899999999988877654 68999999997
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=5.4e-05 Score=69.07 Aligned_cols=152 Identities=7% Similarity=-0.119 Sum_probs=94.4
Q ss_pred hHHHHHhhCCCcEEEEEEccCCCCCH---------HHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCH
Q psy7539 3 LLEKILRTCENVKIYILLRPKKNKNS---------RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISA 73 (318)
Q Consensus 3 l~~~Ll~~~~~~~V~~l~R~~~~~~~---------~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~ 73 (318)
+++.|.+. |.+|+++.|+...... .+.+.+.. .....++.++.+|++++
T Consensus 78 ia~ala~~--Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~~~~~~~Dvtd~------ 135 (418)
T 4eue_A 78 ISVAFGGP--EAHTIGVSYETGATDRRIGTAGWYNNIFFKEFA--------------KKKGLVAKNFIEDAFSN------ 135 (418)
T ss_dssp HHHHHSSS--CCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHH--------------HHTTCCEEEEESCTTCH------
T ss_pred HHHHHHhC--CCEEEEEecCcchhhhcccccccchHHHHHHHH--------------HHcCCcEEEEEeeCCCH------
Confidence 56667666 8999999997543220 12222221 12234688999999986
Q ss_pred HHHHHHhc-------CccEEEEccccc-------------C----------------------------cchhHHHHHHH
Q psy7539 74 EDRQMLSE-------TIHIVYHIAATV-------------R----------------------------FDDYMQTYVFL 105 (318)
Q Consensus 74 ~~~~~~~~-------~~d~Vih~Aa~~-------------~----------------------------~~~~~~~~~~~ 105 (318)
++.+.+++ ++|++||+||.. . ....++..+++
T Consensus 136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v 215 (418)
T 4eue_A 136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV 215 (418)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence 45555443 689999999863 0 11223345555
Q ss_pred hHHHHH-HHHHHHHhcCCC----ccEEEEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCC
Q psy7539 106 NTRGTR-DMLNLSKQMIHL----QLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPN 180 (318)
Q Consensus 106 Nv~gt~-~ll~~a~~~~~~----~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (318)
|..+.. .++.++... .. .++|++||...... .|.. +..
T Consensus 216 n~~~~~~~~~~~l~~~-~~~~~gg~IV~iSSi~~~~~----------~p~~--------------------------~~~ 258 (418)
T 4eue_A 216 MGGEDWQEWCEELLYE-DCFSDKATTIAYSYIGSPRT----------YKIY--------------------------REG 258 (418)
T ss_dssp HSSHHHHHHHHHHHHT-TCEEEEEEEEEEECCCCGGG----------TTTT--------------------------TTS
T ss_pred hhHHHHHHHHHHHHHH-hhhcCCcEEEEEeCchhcCC----------CCcc--------------------------ccH
Confidence 655554 555555432 22 37899999754221 1110 016
Q ss_pred chhHHHHHHHHHHHHhhh-----cCCcEEEeccccccc
Q psy7539 181 GYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIP 213 (318)
Q Consensus 181 ~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G 213 (318)
.|+.||.+.+.+.+..+. +|+++.++.||.|-.
T Consensus 259 aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T 296 (418)
T 4eue_A 259 TIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT 296 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence 899999998888766543 379999999998754
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.6e-05 Score=87.44 Aligned_cols=149 Identities=14% Similarity=0.214 Sum_probs=99.3
Q ss_pred hhHHHHHhhCCCcE-EEEEEccCCCCCHH-HHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 2 VLLEKILRTCENVK-IYILLRPKKNKNSR-ERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~-V~~l~R~~~~~~~~-~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++++.|+++ |.+ |+++.|+....... +.+.++ .....++.++.+|+++. +++..+
T Consensus 1899 aia~~la~~--Ga~~vvl~~R~~~~~~~~~~~~~~l---------------~~~g~~v~~~~~Dvsd~------~~v~~~ 1955 (2512)
T 2vz8_A 1899 QLAQWLRLR--GAQKLVLTSRSGIRTGYQARQVREW---------------RRQGVQVLVSTSNASSL------DGARSL 1955 (2512)
T ss_dssp HHHHHHHHT--TCCEEEEECSSCCCSHHHHHHHHHH---------------HHTTCEEEEECCCSSSH------HHHHHH
T ss_pred HHHHHHHHC--CCCEEEEEeCCCcchHHHHHHHHHH---------------HhCCCEEEEEecCCCCH------HHHHHH
Confidence 578889888 985 88888875433221 112211 11234788899999986 456554
Q ss_pred hc------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 80 SE------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 80 ~~------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
++ .+|+|||+||.... ...++..+++|+.|+.++.+++... ....+||++||..+....
T Consensus 1956 ~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~------- 2028 (2512)
T 2vz8_A 1956 ITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN------- 2028 (2512)
T ss_dssp HHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC-------
T ss_pred HHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC-------
Confidence 43 68999999997421 1234457888999999998887642 234689999997653210
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEeccccc
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSII 211 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v 211 (318)
| ....|+.+|...+.+.+.....|++...+.++.+
T Consensus 2029 ---~----------------------------g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2029 ---A----------------------------GQANYGFANSAMERICEKRRHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp ---T----------------------------TCHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCB
T ss_pred ---C----------------------------CcHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCc
Confidence 0 0168999999999999866557888888887755
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0034 Score=69.82 Aligned_cols=223 Identities=8% Similarity=0.022 Sum_probs=120.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|++. |.+|++..|+.... ..+.+++..+ +. .....++.++.+|+++. +++..+++
T Consensus 2152 AiA~~La~~--GA~Vvi~~r~~~~~-~~~~~~~l~~---------~l--~~~G~~~~~v~~Dvtd~------~~v~~lv~ 2211 (3089)
T 3zen_D 2152 SVVGQLLDG--GATVIATTSRLDDD-RLAFYKQLYR---------DH--ARFDATLWVVPANMASY------SDIDKLVE 2211 (3089)
T ss_dssp HHHHHHHHT--TCEEEEEESCCSHH-HHHHHHHHHH---------HH--CCTTCEEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEeCChhhh-hhHHHHHHHH---------HH--hhcCCeEEEEEecCCCH------HHHHHHHH
Confidence 678899998 99999999864321 1111222211 00 12234678899999986 56665532
Q ss_pred -----------CccEEEEcccc----cC------------cchhHHHHHHHhHHHHHHHHHHHHhc---CCCc---cEEE
Q psy7539 82 -----------TIHIVYHIAAT----VR------------FDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQ---LFVY 128 (318)
Q Consensus 82 -----------~~d~Vih~Aa~----~~------------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~---~~v~ 128 (318)
++|++||+||. .. +....+..+++|+.++..++.++... .+.. .+|.
T Consensus 2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D 2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp HHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence 47999999997 11 11223345888999988887766532 1211 2222
Q ss_pred EeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhc-----CCcE
Q psy7539 129 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEA-----GMPC 203 (318)
Q Consensus 129 ~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~ 203 (318)
.+|.. .+.. +....|+.||.+.+.+.+.++.. ++.+
T Consensus 2292 ~~ss~-~g~~--------------------------------------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrV 2332 (3089)
T 3zen_D 2292 PGSPN-RGMF--------------------------------------GGDGAYGEAKSALDALENRWSAEKSWAERVSL 2332 (3089)
T ss_dssp EECSS-TTSC--------------------------------------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEE
T ss_pred ECCcc-cccC--------------------------------------CCchHHHHHHHHHHHHHHHHHhccccCCCeEE
Confidence 22211 1100 00168999999999888776542 4667
Q ss_pred EEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCC-CCCCCcEE
Q psy7539 204 MILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSN-PGNTMRVI 282 (318)
Q Consensus 204 ~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~-~~~~~~~~ 282 (318)
+.+.||.|-+... .............. + . -....+|+|.+++.++...... .....-..
T Consensus 2333 n~v~PG~v~tT~l----------~~~~~~~~~~~~~~-------~--~-r~~~PeEIA~avlfLaS~~a~~~~~~~p~~v 2392 (3089)
T 3zen_D 2333 AHALIGWTKGTGL----------MGQNDAIVSAVEEA-------G--V-TTYTTDEMAAMLLDLCTVETKVAAAGAPVKV 2392 (3089)
T ss_dssp EEEECCCEECSTT----------TTTTTTTHHHHGGG-------S--C-BCEEHHHHHHHHHHTTSHHHHHHHHHSCEEE
T ss_pred EEEeecccCCCcc----------cccchhHHHHHHhc-------C--C-CCCCHHHHHHHHHHHhChhhhhHhcCCeEEE
Confidence 7777876643211 00000001111100 0 0 1126799999999887643210 00001234
Q ss_pred EeeCCCCC-ceeHHHHHHHHHH
Q psy7539 283 NLTANKDF-QITWYDIIENGKD 303 (318)
Q Consensus 283 ni~~~~~~-~~~~~el~~~i~~ 303 (318)
.+.++... ..++.++...+++
T Consensus 2393 dl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D 2393 DLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp ECSBSCSSCCCCHHHHTHHHHH
T ss_pred EcCCCcCcCCCCHHHHHHHHHH
Confidence 44455323 4688888886644
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0045 Score=45.17 Aligned_cols=81 Identities=10% Similarity=-0.045 Sum_probs=56.5
Q ss_pred hhHHHHHhhCCC-cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRTCEN-VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~-~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++.|++. | ++|+++.|+. +++... ....+.++.+|+.++ +.+..++
T Consensus 19 ~~~~~l~~~--g~~~v~~~~r~~------~~~~~~-----------------~~~~~~~~~~d~~~~------~~~~~~~ 67 (118)
T 3ic5_A 19 MIAALLKTS--SNYSVTVADHDL------AALAVL-----------------NRMGVATKQVDAKDE------AGLAKAL 67 (118)
T ss_dssp HHHHHHHHC--SSEEEEEEESCH------HHHHHH-----------------HTTTCEEEECCTTCH------HHHHHHT
T ss_pred HHHHHHHhC--CCceEEEEeCCH------HHHHHH-----------------HhCCCcEEEecCCCH------HHHHHHH
Confidence 577888887 7 7999999952 222211 123677889999875 6788888
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEE
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYV 129 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~ 129 (318)
+++|+|||+++.. .+.+++++|.+. +++.|.+.
T Consensus 68 ~~~d~vi~~~~~~---------------~~~~~~~~~~~~-g~~~~~~~ 100 (118)
T 3ic5_A 68 GGFDAVISAAPFF---------------LTPIIAKAAKAA-GAHYFDLT 100 (118)
T ss_dssp TTCSEEEECSCGG---------------GHHHHHHHHHHT-TCEEECCC
T ss_pred cCCCEEEECCCch---------------hhHHHHHHHHHh-CCCEEEec
Confidence 9999999999631 135778888884 76655433
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.012 Score=51.87 Aligned_cols=57 Identities=7% Similarity=-0.021 Sum_probs=46.3
Q ss_pred HHHHHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEec
Q psy7539 74 EDRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 131 (318)
Q Consensus 74 ~~~~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS 131 (318)
+++.+.++++|+|||+||.... ..+..++...|+.++.++++++.+. +.+.+|+++|
T Consensus 68 ~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~S 125 (326)
T 1smk_A 68 QQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLIS 125 (326)
T ss_dssp HHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred CCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEEC
Confidence 3577778999999999997532 2333467899999999999999996 7788888887
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0015 Score=57.72 Aligned_cols=121 Identities=8% Similarity=-0.033 Sum_probs=77.5
Q ss_pred HHHHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCc-cEEEEeccccccCCcccccccCCCCCCh
Q psy7539 75 DRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQ-LFVYVSTAYCHPKEKVLEEKTYPPPVSP 152 (318)
Q Consensus 75 ~~~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~v~~SS~~~~~~~~~~~E~~~~~p~~~ 152 (318)
++.+.++++|+|||+||.... ..+..++...|+.+++++++++.+..+.. +||++|....... ....+....-| +
T Consensus 76 ~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t-~~~~~~~~~~p--~ 152 (329)
T 1b8p_A 76 DPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNA-YIAMKSAPSLP--A 152 (329)
T ss_dssp SHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-HHHHHTCTTSC--G
T ss_pred CcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHH-HHHHHHcCCCC--H
Confidence 466778999999999997643 33456789999999999999999862245 7888887221000 00000000000 0
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCC-CCCCccc
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKD-PLPGWTD 224 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~-~~~g~~~ 224 (318)
. ..|+.+++...++....++ .|++...++...|+|.+.. .++-|..
T Consensus 153 ~--------------------------~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg~s~~p~~s~ 200 (329)
T 1b8p_A 153 K--------------------------NFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRY 200 (329)
T ss_dssp G--------------------------GEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSSTTCEEECSS
T ss_pred H--------------------------HEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccCCcEeeehHH
Confidence 0 4578888888888877776 6777677776667886533 3354543
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0021 Score=56.36 Aligned_cols=53 Identities=9% Similarity=0.001 Sum_probs=43.8
Q ss_pred HHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEec
Q psy7539 77 QMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 131 (318)
Q Consensus 77 ~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS 131 (318)
.+.++++|+|||+||.... ..+..+++..|+.+++++++++.+. + +.+|+++|
T Consensus 69 ~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~S 122 (313)
T 1hye_A 69 LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVIT 122 (313)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECS
T ss_pred HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEec
Confidence 4567899999999997642 3345678999999999999999997 6 88888887
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=95.39 E-value=0.045 Score=50.34 Aligned_cols=93 Identities=13% Similarity=0.131 Sum_probs=58.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|++. |++|++..|+. ++.+++ .....++..+.+|+++. +++..+++
T Consensus 17 ~ia~~L~~~--G~~V~v~~R~~------~~a~~l---------------a~~~~~~~~~~~Dv~d~------~~l~~~l~ 67 (450)
T 1ff9_A 17 PTLDVLTDS--GIKVTVACRTL------ESAKKL---------------SAGVQHSTPISLDVNDD------AALDAEVA 67 (450)
T ss_dssp HHHHHHHTT--TCEEEEEESSH------HHHHHT---------------TTTCTTEEEEECCTTCH------HHHHHHHT
T ss_pred HHHHHHHhC--cCEEEEEECCH------HHHHHH---------------HHhcCCceEEEeecCCH------HHHHHHHc
Confidence 577888876 88999998852 122211 11112467888999865 57778888
Q ss_pred CccEEEEcccccCcchhHHHHHH--HhH-------HHHHHHHHHHHhcCCCc
Q psy7539 82 TIHIVYHIAATVRFDDYMQTYVF--LNT-------RGTRDMLNLSKQMIHLQ 124 (318)
Q Consensus 82 ~~d~Vih~Aa~~~~~~~~~~~~~--~Nv-------~gt~~ll~~a~~~~~~~ 124 (318)
++|+|||+++......-.....+ .|+ ..+.+++++|++. +++
T Consensus 68 ~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~ 118 (450)
T 1ff9_A 68 KHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT 118 (450)
T ss_dssp TSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred CCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence 99999999986432211112222 232 4688999999985 654
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=95.39 E-value=0.026 Score=49.07 Aligned_cols=52 Identities=10% Similarity=-0.063 Sum_probs=43.2
Q ss_pred HhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEec
Q psy7539 79 LSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 131 (318)
Q Consensus 79 ~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS 131 (318)
.++++|+|||+|+.... ..+..+++..|+.+++++++++.+. +...+|+++|
T Consensus 67 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~S 119 (303)
T 1o6z_A 67 DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTS 119 (303)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECC
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeC
Confidence 46899999999997642 2345578999999999999999996 7888888887
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=92.86 E-value=0.09 Score=45.13 Aligned_cols=66 Identities=12% Similarity=0.047 Sum_probs=44.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++..|++. |++|+++.|+.. ..+.+.+.+. . ..+++++.+|++++ +++..++
T Consensus 133 ~aia~~L~~~--G~~V~i~~R~~~---~~~~l~~~~~-------------~--~~~~~~~~~D~~~~------~~~~~~~ 186 (287)
T 1lu9_A 133 MRSAALLAGE--GAEVVLCGRKLD---KAQAAADSVN-------------K--RFKVNVTAAETADD------ASRAEAV 186 (287)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHH---HHHHHHHHHH-------------H--HHTCCCEEEECCSH------HHHHHHT
T ss_pred HHHHHHHHHC--cCEEEEEECCHH---HHHHHHHHHH-------------h--cCCcEEEEecCCCH------HHHHHHH
Confidence 3678889888 889999998521 1111211110 0 02456778899875 5788888
Q ss_pred cCccEEEEcccc
Q psy7539 81 ETIHIVYHIAAT 92 (318)
Q Consensus 81 ~~~d~Vih~Aa~ 92 (318)
+++|+|||+|+.
T Consensus 187 ~~~DvlVn~ag~ 198 (287)
T 1lu9_A 187 KGAHFVFTAGAI 198 (287)
T ss_dssp TTCSEEEECCCT
T ss_pred HhCCEEEECCCc
Confidence 899999999985
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=91.93 E-value=0.17 Score=37.79 Aligned_cols=86 Identities=8% Similarity=0.045 Sum_probs=51.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH-h
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML-S 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~-~ 80 (318)
.+++.|.+. |++|+++.|+. ++++.. . .....++.+|.+++ +.+..+ .
T Consensus 20 ~~a~~l~~~--g~~v~~~d~~~------~~~~~~---------------~--~~~~~~~~~d~~~~------~~l~~~~~ 68 (144)
T 2hmt_A 20 SIVKELHRM--GHEVLAVDINE------EKVNAY---------------A--SYATHAVIANATEE------NELLSLGI 68 (144)
T ss_dssp HHHHHHHHT--TCCCEEEESCH------HHHHTT---------------T--TTCSEEEECCTTCH------HHHHTTTG
T ss_pred HHHHHHHHC--CCEEEEEeCCH------HHHHHH---------------H--HhCCEEEEeCCCCH------HHHHhcCC
Confidence 466777777 78888888842 111110 1 11345678888754 456554 5
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEecc
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTA 132 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~ 132 (318)
+++|+||++++.. . +.|. .+.+.+++. ++++++..++.
T Consensus 69 ~~~d~vi~~~~~~-----~----~~~~----~~~~~~~~~-~~~~ii~~~~~ 106 (144)
T 2hmt_A 69 RNFEYVIVAIGAN-----I----QAST----LTTLLLKEL-DIPNIWVKAQN 106 (144)
T ss_dssp GGCSEEEECCCSC-----H----HHHH----HHHHHHHHT-TCSEEEEECCS
T ss_pred CCCCEEEECCCCc-----h----HHHH----HHHHHHHHc-CCCeEEEEeCC
Confidence 6899999998741 1 1222 355667765 66666665553
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.16 E-value=1 Score=41.45 Aligned_cols=92 Identities=7% Similarity=0.082 Sum_probs=55.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
++++.|++. ++++|++..|+. ++.+++. .. .++.++.+|+.+. +++..+++
T Consensus 37 aia~~L~~~-~g~~V~v~~R~~------~ka~~la--------------~~--~~~~~~~~D~~d~------~~l~~~l~ 87 (467)
T 2axq_A 37 PVIDTLAAN-DDINVTVACRTL------ANAQALA--------------KP--SGSKAISLDVTDD------SALDKVLA 87 (467)
T ss_dssp HHHHHHHTS-TTEEEEEEESSH------HHHHHHH--------------GG--GTCEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHhC-CCCeEEEEECCH------HHHHHHH--------------Hh--cCCcEEEEecCCH------HHHHHHHc
Confidence 567777766 567999999852 2222221 11 2466778888765 56778888
Q ss_pred CccEEEEcccccCcchhHHHHHHH-------hH--HHHHHHHHHHHhcCCC
Q psy7539 82 TIHIVYHIAATVRFDDYMQTYVFL-------NT--RGTRDMLNLSKQMIHL 123 (318)
Q Consensus 82 ~~d~Vih~Aa~~~~~~~~~~~~~~-------Nv--~gt~~ll~~a~~~~~~ 123 (318)
++|+|||+++......-.....+. ++ ..+.+++++|++. ++
T Consensus 88 ~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~a-Gv 137 (467)
T 2axq_A 88 DNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKA-GI 137 (467)
T ss_dssp TSSEEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHH-TC
T ss_pred CCCEEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHc-CC
Confidence 999999999864211111111111 21 3467788888874 54
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=89.57 E-value=0.77 Score=33.93 Aligned_cols=85 Identities=15% Similarity=0.081 Sum_probs=49.8
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH-h
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML-S 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~-~ 80 (318)
++++.|.+. +++|+++.|+. +++..+ .. ...+.++.+|..++ +.+... +
T Consensus 18 ~~a~~L~~~--g~~v~~~d~~~------~~~~~~---------------~~-~~~~~~~~~d~~~~------~~l~~~~~ 67 (140)
T 1lss_A 18 TLAKSLSEK--GHDIVLIDIDK------DICKKA---------------SA-EIDALVINGDCTKI------KTLEDAGI 67 (140)
T ss_dssp HHHHHHHHT--TCEEEEEESCH------HHHHHH---------------HH-HCSSEEEESCTTSH------HHHHHTTT
T ss_pred HHHHHHHhC--CCeEEEEECCH------HHHHHH---------------HH-hcCcEEEEcCCCCH------HHHHHcCc
Confidence 467778777 88999998842 122211 00 11456778888754 344433 5
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEec
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 131 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS 131 (318)
+++|+||++.... ..|. .+.++++.. +..++|..++
T Consensus 68 ~~~d~vi~~~~~~----------~~~~----~~~~~~~~~-~~~~ii~~~~ 103 (140)
T 1lss_A 68 EDADMYIAVTGKE----------EVNL----MSSLLAKSY-GINKTIARIS 103 (140)
T ss_dssp TTCSEEEECCSCH----------HHHH----HHHHHHHHT-TCCCEEEECS
T ss_pred ccCCEEEEeeCCc----------hHHH----HHHHHHHHc-CCCEEEEEec
Confidence 6899999997531 1222 345566664 5567665433
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=89.27 E-value=0.46 Score=42.91 Aligned_cols=68 Identities=18% Similarity=0.178 Sum_probs=44.3
Q ss_pred hhHHHHHhhCCCc--EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 2 VLLEKILRTCENV--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~--~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++++.|++. +++ +|++..|+.. ..+.+.+.+. .....++.++.+|+++. +++.++
T Consensus 15 ~ia~~L~~~-g~~~~~V~v~~r~~~---~~~~la~~l~-------------~~~~~~~~~~~~D~~d~------~~l~~~ 71 (405)
T 4ina_A 15 VVAHKMAMN-REVFSHITLASRTLS---KCQEIAQSIK-------------AKGYGEIDITTVDADSI------EELVAL 71 (405)
T ss_dssp HHHHHHHTC-TTTCCEEEEEESCHH---HHHHHHHHHH-------------HTTCCCCEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHhC-CCCceEEEEEECCHH---HHHHHHHHhh-------------hhcCCceEEEEecCCCH------HHHHHH
Confidence 567788876 444 8999888532 1122221110 00113688899999876 678888
Q ss_pred hcC--ccEEEEcccc
Q psy7539 80 SET--IHIVYHIAAT 92 (318)
Q Consensus 80 ~~~--~d~Vih~Aa~ 92 (318)
+++ +|+|||+|+.
T Consensus 72 l~~~~~DvVin~ag~ 86 (405)
T 4ina_A 72 INEVKPQIVLNIALP 86 (405)
T ss_dssp HHHHCCSEEEECSCG
T ss_pred HHhhCCCEEEECCCc
Confidence 876 9999999985
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=88.19 E-value=0.54 Score=38.89 Aligned_cols=65 Identities=9% Similarity=0.088 Sum_probs=39.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+|++.|+.+ |++|+++.|+.... +.....+.++..+-...- .+.+...+.
T Consensus 34 aiA~~~~~~--Ga~V~lv~~~~~~~------------------------~~~~~~~~~~~v~s~~em----~~~v~~~~~ 83 (232)
T 2gk4_A 34 IITETLLSA--GYEVCLITTKRALK------------------------PEPHPNLSIREITNTKDL----LIEMQERVQ 83 (232)
T ss_dssp HHHHHHHHT--TCEEEEEECTTSCC------------------------CCCCTTEEEEECCSHHHH----HHHHHHHGG
T ss_pred HHHHHHHHC--CCEEEEEeCCcccc------------------------ccCCCCeEEEEHhHHHHH----HHHHHHhcC
Confidence 578899998 99999999964321 111124555544322100 012223345
Q ss_pred CccEEEEcccccCcc
Q psy7539 82 TIHIVYHIAATVRFD 96 (318)
Q Consensus 82 ~~d~Vih~Aa~~~~~ 96 (318)
++|++||+||...+.
T Consensus 84 ~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 84 DYQVLIHSMAVSDYT 98 (232)
T ss_dssp GCSEEEECSBCCSEE
T ss_pred CCCEEEEcCcccccc
Confidence 799999999987654
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=87.99 E-value=2.4 Score=31.46 Aligned_cols=59 Identities=17% Similarity=0.127 Sum_probs=40.5
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH-h
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML-S 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~-~ 80 (318)
++++.|.+. |++|+++.|++ ++++.. ....+.++.||.+++ +.+..+ .
T Consensus 20 ~la~~L~~~--g~~V~~id~~~------~~~~~~-----------------~~~~~~~~~gd~~~~------~~l~~~~~ 68 (141)
T 3llv_A 20 GLVRELTAA--GKKVLAVDKSK------EKIELL-----------------EDEGFDAVIADPTDE------SFYRSLDL 68 (141)
T ss_dssp HHHHHHHHT--TCCEEEEESCH------HHHHHH-----------------HHTTCEEEECCTTCH------HHHHHSCC
T ss_pred HHHHHHHHC--CCeEEEEECCH------HHHHHH-----------------HHCCCcEEECCCCCH------HHHHhCCc
Confidence 577888877 89999998842 222211 113577899999876 456654 3
Q ss_pred cCccEEEEccc
Q psy7539 81 ETIHIVYHIAA 91 (318)
Q Consensus 81 ~~~d~Vih~Aa 91 (318)
+++|+||.+.+
T Consensus 69 ~~~d~vi~~~~ 79 (141)
T 3llv_A 69 EGVSAVLITGS 79 (141)
T ss_dssp TTCSEEEECCS
T ss_pred ccCCEEEEecC
Confidence 58999998776
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=87.43 E-value=0.91 Score=34.94 Aligned_cols=67 Identities=18% Similarity=0.183 Sum_probs=39.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCC----HHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHH
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKN----SRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQ 77 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~----~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~ 77 (318)
..++.|.+. |++|++..|+..... ..+.++ ....+...+.+|++++ +.+++.
T Consensus 31 a~a~~La~~--Ga~vvi~~r~~~e~~~~~~~~~~~~------------------~~G~~~~~i~~Dv~~~----~~~~v~ 86 (157)
T 3gxh_A 31 QQFSLLKQA--GVDVVINLMPDSSKDAHPDEGKLVT------------------QAGMDYVYIPVDWQNP----KVEDVE 86 (157)
T ss_dssp HHHHHHHHT--TCCEEEECSCTTSTTSCTTHHHHHH------------------HTTCEEEECCCCTTSC----CHHHHH
T ss_pred HHHHHHHHc--CCCEEEECCCcccccccccHHHHHH------------------HcCCeEEEecCCCCCC----CHHHHH
Confidence 356777777 998888777643321 111111 1123566678898876 224555
Q ss_pred HHhc------CccEEEEcccc
Q psy7539 78 MLSE------TIHIVYHIAAT 92 (318)
Q Consensus 78 ~~~~------~~d~Vih~Aa~ 92 (318)
.+++ +-|++|||||.
T Consensus 87 ~~~~~i~~~~G~dVLVnnAgg 107 (157)
T 3gxh_A 87 AFFAAMDQHKGKDVLVHCLAN 107 (157)
T ss_dssp HHHHHHHHTTTSCEEEECSBS
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 4432 23999999986
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=87.09 E-value=0.28 Score=41.82 Aligned_cols=37 Identities=8% Similarity=0.034 Sum_probs=28.8
Q ss_pred CchhHHHHHHHHHHHHhhh-------------------cCCcEEEecccccccccC
Q psy7539 180 NGYAYTKCLCEGVVTEYME-------------------AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 180 ~~Y~~sK~~~E~~~~~~~~-------------------~~~~~~ilR~~~v~G~~~ 216 (318)
.+||.++.++|.+...... .++.+..+|.|.++|.+.
T Consensus 166 aPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~h~ 221 (273)
T 1dih_A 166 APSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHT 221 (273)
T ss_dssp SSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEEEE
T ss_pred CCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCccEE
Confidence 7899999999999765321 256788999999988653
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=86.52 E-value=5.1 Score=34.61 Aligned_cols=56 Identities=11% Similarity=-0.051 Sum_probs=41.2
Q ss_pred HHHHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCc-cEEEEec
Q psy7539 75 DRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQ-LFVYVST 131 (318)
Q Consensus 75 ~~~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~v~~SS 131 (318)
++...++++|+||++||.... .....++...|+..++.+++.+.+. ... .++++|-
T Consensus 61 d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~sN 118 (314)
T 1mld_A 61 QLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICIISN 118 (314)
T ss_dssp GHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECSS
T ss_pred CHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECC
Confidence 466678999999999997532 2333467889999999999999886 443 5555544
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=86.25 E-value=18 Score=32.28 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=26.4
Q ss_pred ccceEEEeccCCCCCCCCCHHHHHHHhc-------CccEEEEccccc
Q psy7539 54 FEKVIPINGDVAVPDLGISAEDRQMLSE-------TIHIVYHIAATV 93 (318)
Q Consensus 54 ~~~i~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~Aa~~ 93 (318)
..+...+.+|++++ +..+.+++ ++|++||++|..
T Consensus 111 G~~a~~i~~Dv~d~------e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 111 GLYSVTIDGDAFSD------EIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp TCCEEEEESCTTSH------HHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred CCCceeEeCCCCCH------HHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 45778899999986 56665553 689999999964
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=85.44 E-value=1.4 Score=33.47 Aligned_cols=64 Identities=8% Similarity=0.098 Sum_probs=43.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH-h
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML-S 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~-~ 80 (318)
++++.|.+. |++|+++.|+.. +..+++.+. ....+.++.||.+++ +.+..+ +
T Consensus 17 ~la~~L~~~--g~~V~vid~~~~--~~~~~~~~~-----------------~~~~~~~i~gd~~~~------~~l~~a~i 69 (153)
T 1id1_A 17 NTILQLNQR--GQNVTVISNLPE--DDIKQLEQR-----------------LGDNADVIPGDSNDS------SVLKKAGI 69 (153)
T ss_dssp HHHHHHHHT--TCCEEEEECCCH--HHHHHHHHH-----------------HCTTCEEEESCTTSH------HHHHHHTT
T ss_pred HHHHHHHHC--CCCEEEEECCCh--HHHHHHHHh-----------------hcCCCeEEEcCCCCH------HHHHHcCh
Confidence 577888887 899999988421 111122211 123688999999876 567665 6
Q ss_pred cCccEEEEcccc
Q psy7539 81 ETIHIVYHIAAT 92 (318)
Q Consensus 81 ~~~d~Vih~Aa~ 92 (318)
+++|.||-+.+.
T Consensus 70 ~~ad~vi~~~~~ 81 (153)
T 1id1_A 70 DRCRAILALSDN 81 (153)
T ss_dssp TTCSEEEECSSC
T ss_pred hhCCEEEEecCC
Confidence 799999988753
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=85.32 E-value=0.73 Score=40.39 Aligned_cols=55 Identities=5% Similarity=-0.022 Sum_probs=42.0
Q ss_pred HHHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCc--cEEEEec
Q psy7539 76 RQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQ--LFVYVST 131 (318)
Q Consensus 76 ~~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~--~~v~~SS 131 (318)
..+.++++|+|||+||...- ..+..++++.|+..++++++++.+. +.+ +++.+|-
T Consensus 73 ~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvsN 130 (333)
T 5mdh_A 73 EEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVGN 130 (333)
T ss_dssp HHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECSS
T ss_pred cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcCC
Confidence 44567899999999997532 2344578899999999999999986 554 4666665
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=81.72 E-value=6 Score=29.87 Aligned_cols=60 Identities=10% Similarity=0.048 Sum_probs=37.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchh-ccceEEEeccCCCCCCCCCHHHHHHH-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAI-FEKVIPINGDVAVPDLGISAEDRQML- 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~gDl~~~~~gl~~~~~~~~- 79 (318)
.+++.|.+. |++|+++.|+....+ ... ...+.++.+|..++ +.+...
T Consensus 33 ~la~~L~~~--g~~V~vid~~~~~~~-----------------------~~~~~~g~~~~~~d~~~~------~~l~~~~ 81 (155)
T 2g1u_A 33 LIANLASSS--GHSVVVVDKNEYAFH-----------------------RLNSEFSGFTVVGDAAEF------ETLKECG 81 (155)
T ss_dssp HHHHHHHHT--TCEEEEEESCGGGGG-----------------------GSCTTCCSEEEESCTTSH------HHHHTTT
T ss_pred HHHHHHHhC--CCeEEEEECCHHHHH-----------------------HHHhcCCCcEEEecCCCH------HHHHHcC
Confidence 456677766 889999988533210 001 12456777887654 445544
Q ss_pred hcCccEEEEcccc
Q psy7539 80 SETIHIVYHIAAT 92 (318)
Q Consensus 80 ~~~~d~Vih~Aa~ 92 (318)
++++|+||.+.+.
T Consensus 82 ~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 82 MEKADMVFAFTND 94 (155)
T ss_dssp GGGCSEEEECSSC
T ss_pred cccCCEEEEEeCC
Confidence 5689999998764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 318 | ||||
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 6e-07 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (113), Expect = 6e-07
Identities = 43/215 (20%), Positives = 77/215 (35%), Gaps = 41/215 (19%)
Query: 71 ISAEDRQMLSETIHIVYHIAATVRFDDYMQ---TYVFLNTRGTRDMLNLSKQMIHLQLFV 127
I+ + + L + +YH+A+ +YM + NT GT +ML L+K+ +
Sbjct: 54 INHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKR--VGARLL 111
Query: 128 YVSTA--YCHPKEKVLEEK--TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYA 183
ST+ Y P+ E + P+ P Y
Sbjct: 112 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRAC--------------------------YD 145
Query: 184 YTKCLCEGVVTEYMEA-GMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIR 242
K + E + YM+ G+ + R ++ + ++ A +G
Sbjct: 146 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM-----NDGRVVSNFILQALQGEPL 200
Query: 243 TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGN 277
T+Y S F V LVNG++ + +S+P N
Sbjct: 201 TVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVN 235
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 318 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.97 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.97 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.96 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.96 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.95 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.95 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.95 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.95 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.95 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.94 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.94 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.94 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.93 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.93 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.91 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.91 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.87 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.87 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.85 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.84 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.81 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.8 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.78 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.76 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.75 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.73 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.64 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.38 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.34 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.31 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.31 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.3 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.28 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.28 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.27 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.26 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.26 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.25 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.25 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.25 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.25 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.24 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.23 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.23 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.23 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.23 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.22 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.21 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.2 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.2 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.2 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.2 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.19 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.19 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.18 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.17 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.17 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.15 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.11 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.1 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.09 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.09 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.08 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.06 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.06 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.05 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.04 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.03 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.03 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.03 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.02 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.97 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.94 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.94 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.93 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.92 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.91 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.88 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.85 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.82 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.78 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.72 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.71 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.68 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.64 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.62 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.56 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.47 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 98.46 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.4 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.13 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.81 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 97.63 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 95.66 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 81.19 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 81.15 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2e-32 Score=246.32 Aligned_cols=248 Identities=15% Similarity=0.057 Sum_probs=183.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+++ |++|+++.|..+.. ..+++..+.+.. ....++++++.||+++. +.+..++
T Consensus 15 s~lv~~Ll~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~~Dl~d~------~~~~~~~ 74 (357)
T d1db3a_ 15 SYLAEFLLEK--GYEVHGIKRRASSF-NTERVDHIYQDP-----------HTCNPKFHLHYGDLSDT------SNLTRIL 74 (357)
T ss_dssp HHHHHHHHHT--TCEEEEECC---------------------------------CCEEECCCCSSCH------HHHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEECCCccc-chhhHHHHHhhh-----------hhcCCCeEEEEeecCCH------HHHHHHH
Confidence 4799999998 99999999965422 123333332210 23346899999999976 6888888
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcC--CCccEEEEeccccccCC--cccccccCCCCCC
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMI--HLQLFVYVSTAYCHPKE--KVLEEKTYPPPVS 151 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~~v~~SS~~~~~~~--~~~~E~~~~~p~~ 151 (318)
+ ++|+|||+||..+.. ..+..++++|+.||.+|+++|++.. +.++|||+||+.+||.. .+++|+.+..|.
T Consensus 75 ~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~- 153 (357)
T d1db3a_ 75 REVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR- 153 (357)
T ss_dssp HHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC-
T ss_pred hccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCC-
Confidence 7 569999999986432 3456789999999999999999851 33479999999998763 378887766665
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPT 230 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~ 230 (318)
+.|+.||+++|.+++.+.+ ++++++++||+++||+...+.. ......
T Consensus 154 ----------------------------~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~----~~~~i~ 201 (357)
T d1db3a_ 154 ----------------------------SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETF----VTRKIT 201 (357)
T ss_dssp ----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS----HHHHHH
T ss_pred ----------------------------ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCC----CchHHH
Confidence 8999999999999999988 7999999999999997532210 000112
Q ss_pred HHHHHHhcCce-eeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 231 GLLIGAGKGII-RTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 231 ~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
..+.....+.. ....+++.+.++|+||+|+|.+++.++++.. ++.||++++ .++|++|+++.+.+.+|...
T Consensus 202 ~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~~------~~~yni~sg--~~~s~~~~~~~~~~~~g~~~ 273 (357)
T d1db3a_ 202 RAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ------PEDFVIATG--VQYSVRQFVEMAAAQLGIKL 273 (357)
T ss_dssp HHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS------CCCEEECCC--CCEEHHHHHHHHHHTTTEEE
T ss_pred HHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCCC------CCeEEECCC--CceehHHHHHHHHHHhCCcc
Confidence 34444444433 3466899999999999999999999998753 679999999 89999999999999986543
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.97 E-value=2.3e-29 Score=222.90 Aligned_cols=207 Identities=16% Similarity=0.107 Sum_probs=174.5
Q ss_pred ccceEEEeccCCCCCCCCCHHHHHHHhcCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEe
Q psy7539 54 FEKVIPINGDVAVPDLGISAEDRQMLSETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVS 130 (318)
Q Consensus 54 ~~~i~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~S 130 (318)
..+++++.+|+.+. ........++|.|+|+|+..... ..+.+.+++|+.||.+|+++|.+. ++++|||+|
T Consensus 54 ~~~~~~~~~d~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~S 126 (322)
T d1r6da_ 54 DPRLRFVHGDIRDA------GLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVS 126 (322)
T ss_dssp CTTEEEEECCTTCH------HHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred CCCeEEEEeccccc------hhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEee
Confidence 35899999999876 46667778999999999876433 234568899999999999999995 899999999
Q ss_pred ccccccCCc--ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEec
Q psy7539 131 TAYCHPKEK--VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILR 207 (318)
Q Consensus 131 S~~~~~~~~--~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR 207 (318)
|.++|+... +++|+.+..|. +.|+.||.++|.++..+.+ ++++++++|
T Consensus 127 s~~~yg~~~~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR 177 (322)
T d1r6da_ 127 TNQVYGSIDSGSWTESSPLEPN-----------------------------SPYAASKAGSDLVARAYHRTYGLDVRITR 177 (322)
T ss_dssp EGGGGCCCSSSCBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cceeecCCCCCCCCCCCCCCCC-----------------------------CHHHHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 999988743 68887766665 8999999999999999988 899999999
Q ss_pred ccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 208 PSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 208 ~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
|++|||+...+. .-...++..+..+....++++|.+.++|+||+|+|+++..++++... +++||++++
T Consensus 178 ~~~vyGp~~~~~-------~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~-----~~~~ni~~~ 245 (322)
T d1r6da_ 178 CCNNYGPYQHPE-------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA-----GEIYHIGGG 245 (322)
T ss_dssp ECEEECTTCCTT-------SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT-----TCEEEECCC
T ss_pred eeeEECcCCCcC-------cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCC-----CCeeEEeec
Confidence 999999654321 12356777788887777889999999999999999999999998775 789999999
Q ss_pred CCCceeHHHHHHHHHHhhcccCC
Q psy7539 288 KDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 288 ~~~~~~~~el~~~i~~~~~~~~p 310 (318)
.++++.|+++.+.+.+|.+.+
T Consensus 246 --~~~s~~e~~~~i~~~~~~~~~ 266 (322)
T d1r6da_ 246 --LELTNRELTGILLDSLGADWS 266 (322)
T ss_dssp --CEEEHHHHHHHHHHHHTCCGG
T ss_pred --ccchhHHHHHHHHHHhCCCcc
Confidence 899999999999999976543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.7e-30 Score=227.19 Aligned_cols=238 Identities=20% Similarity=0.175 Sum_probs=180.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|..+.... .+.. .....++++...|+.+. ++
T Consensus 15 ~~lv~~L~~~--g~~V~~~d~~~~~~~~--~~~~----------------~~~~~~~d~~~~~~~~~-----------~~ 63 (312)
T d2b69a1 15 SHLTDKLMMD--GHEVTVVDNFFTGRKR--NVEH----------------WIGHENFELINHDVVEP-----------LY 63 (312)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSSCCGG--GTGG----------------GTTCTTEEEEECCTTSC-----------CC
T ss_pred HHHHHHHHHC--cCEEEEEeCCCcCCHH--HHHH----------------hcCCCceEEEehHHHHH-----------HH
Confidence 4799999998 9999999874332210 0000 11123566777776543 34
Q ss_pred cCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCC--CCCChh
Q psy7539 81 ETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYP--PPVSPH 153 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~--~p~~~~ 153 (318)
.++|+|||+||..+.. ..+...+++|+.|+.+|+++|++. ++ +|||+||.++|+... +++|+... .|..|.
T Consensus 64 ~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~ 141 (312)
T d2b69a1 64 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR 141 (312)
T ss_dssp CCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTT
T ss_pred cCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChheecCCCCCCCCccccCCCCCCCCc
Confidence 5899999999986532 345578999999999999999985 55 899999999987633 56664322 122222
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
+.|+.||.++|.++..+.+ +|++++++||++|||+...+.. -.-...+
T Consensus 142 --------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~-----~~~i~~~ 190 (312)
T d2b69a1 142 --------------------------ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMND-----GRVVSNF 190 (312)
T ss_dssp --------------------------HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTC-----CCHHHHH
T ss_pred --------------------------cHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCC-----ccHHHHH
Confidence 7899999999999999988 8999999999999997654321 1123467
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
+..+..|....+++++.+.++|+|++|+|++++.+++... .+.||++++ .++++.++++.+++.+|.+.+
T Consensus 191 i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~------~~~~n~~~~--~~~~~~~~~~~i~~~~~~~~~ 260 (312)
T d2b69a1 191 ILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV------SSPVNLGNP--EEHTILEFAQLIKNLVGSGSE 260 (312)
T ss_dssp HHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC------CSCEEESCC--CEEEHHHHHHHHHHHHTCCCC
T ss_pred HHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc------CCceEecCC--cccchhhHHHHHHHHhCCCCc
Confidence 7788888777788999999999999999999999887654 568999999 899999999999999965543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=9.5e-30 Score=228.96 Aligned_cols=251 Identities=14% Similarity=0.112 Sum_probs=183.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+++ +++|++.+++.+.....+++.. ....++++++.+|++++ +.+..++
T Consensus 14 s~l~~~L~~~--g~~vv~~~d~~~~~~~~~~~~~----------------~~~~~~~~~~~~Dl~d~------~~l~~~~ 69 (361)
T d1kewa_ 14 SAVVRHIIKN--TQDTVVNIDKLTYAGNLESLSD----------------ISESNRYNFEHADICDS------AEITRIF 69 (361)
T ss_dssp HHHHHHHHHH--CSCEEEEEECCCTTCCGGGGTT----------------TTTCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCCEEEEEeCCCccccHHHHHh----------------hhhcCCcEEEEccCCCH------HHHHHHH
Confidence 4799999999 8854444443221111111110 11235899999999987 5777777
Q ss_pred c--CccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcC--------CCccEEEEeccccccCCc--cccccc
Q psy7539 81 E--TIHIVYHIAATVRFDD---YMQTYVFLNTRGTRDMLNLSKQMI--------HLQLFVYVSTAYCHPKEK--VLEEKT 145 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~--------~~~~~v~~SS~~~~~~~~--~~~E~~ 145 (318)
+ ++|+|||+||...... .+..++++|+.||.+++++|++.. ++++|||+||..+|+... +..|..
T Consensus 70 ~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 149 (361)
T d1kewa_ 70 EQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS 149 (361)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred HhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccc
Confidence 6 6899999999865432 234689999999999999998741 345899999999998643 233322
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCccc
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTD 224 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~ 224 (318)
...|.... .....+.+.|+.||.++|.++..+.+ .+++++++||++|||+.... +
T Consensus 150 ~~~~~~~e-------------------~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~ 205 (361)
T d1kewa_ 150 VTLPLFTE-------------------TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-----E 205 (361)
T ss_dssp SCCCCBCT-------------------TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-----T
T ss_pred cCCCCccc-------------------CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc-----C
Confidence 22221000 00011228899999999999999988 89999999999999965321 1
Q ss_pred CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHh
Q psy7539 225 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDI 304 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~ 304 (318)
. -...++..+..|....++++|.+.++|+||+|+|+++..++++... +..||++++ +++++.|+++.+.+.
T Consensus 206 ~--~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~~-----~~~~Ni~s~--~~~s~~~~~~~i~~~ 276 (361)
T d1kewa_ 206 K--LIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKA-----GETYNIGGH--NEKKNLDVVFTICDL 276 (361)
T ss_dssp S--HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT-----TCEEEECCC--CEEEHHHHHHHHHHH
T ss_pred c--HHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCCC-----CCeEEECCC--CCcchHHHHhHhhhh
Confidence 1 1246777788887777889999999999999999999999998765 679999999 899999999999887
Q ss_pred hccc
Q psy7539 305 ARNK 308 (318)
Q Consensus 305 ~~~~ 308 (318)
++..
T Consensus 277 ~~~~ 280 (361)
T d1kewa_ 277 LDEI 280 (361)
T ss_dssp HHHH
T ss_pred cccc
Confidence 7443
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.96 E-value=1.3e-28 Score=219.75 Aligned_cols=249 Identities=19% Similarity=0.146 Sum_probs=196.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC-CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK-NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~-~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|+++.|..... ...+++..... .....+++++.+|+.+. ..+...
T Consensus 30 s~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~d~~d~------~~~~~~ 88 (341)
T d1sb8a_ 30 SNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVS-------------EKQWSNFKFIQGDIRNL------DDCNNA 88 (341)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSC-------------HHHHTTEEEEECCTTSH------HHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHHhhh-------------hcccCCeeEEeeccccc------cccccc
Confidence 4799999999 99999999854322 12222222211 22346899999999876 466777
Q ss_pred hcCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChhH
Q psy7539 80 SETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPHN 154 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~~ 154 (318)
..+++.|+|+|+..... ......++.|+.||.+|+++|.+. ++++|||+||..+|+... +.+|+.+..|.
T Consensus 89 ~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~---- 163 (341)
T d1sb8a_ 89 CAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGLPKVEDTIGKPL---- 163 (341)
T ss_dssp HTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC----
T ss_pred cccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcccceeeCCCCCCCccCCCCCCCC----
Confidence 77999999999875433 334568899999999999999996 899999999999998643 78887777765
Q ss_pred HHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 155 VIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
+.|+.||+++|+++..+.+ .+++++++||+++||+...+...+ . .-...++
T Consensus 164 -------------------------~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~-~--~~i~~~~ 215 (341)
T d1sb8a_ 164 -------------------------SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAY-A--AVIPKWT 215 (341)
T ss_dssp -------------------------SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTT-C--CHHHHHH
T ss_pred -------------------------CcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCch-h--hhHHHHH
Confidence 8999999999999999888 899999999999999876543210 0 1124567
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
..+..|....+.++|.+.++|+||+|+|.++..++...... .+..||++++ ...++.|+++.+.+.++.+
T Consensus 216 ~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~---~~~~~~~~~~--~~~si~~i~~~i~~~~~~~ 285 (341)
T d1sb8a_ 216 SSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDA---RNQVYNIAVG--GRTSLNQLFFALRDGLAEN 285 (341)
T ss_dssp HHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGG---CSEEEEESCS--CCEEHHHHHHHHHHHHHHT
T ss_pred HHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccc---cceeeeeccc--ccchHHHHHHHHHHHhccc
Confidence 77888877778899999999999999999999988765432 3789999998 8999999999999988543
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=8.9e-28 Score=216.00 Aligned_cols=240 Identities=17% Similarity=0.119 Sum_probs=185.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|.+.... .......++..+|+.+. +.+..++
T Consensus 29 s~lv~~L~~~--g~~V~~~d~~~~~~~-----------------------~~~~~~~~~~~~D~~~~------~~~~~~~ 77 (363)
T d2c5aa1 29 SHIARRLKHE--GHYVIASDWKKNEHM-----------------------TEDMFCDEFHLVDLRVM------ENCLKVT 77 (363)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCCSSS-----------------------CGGGTCSEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEeCCCccch-----------------------hhhcccCcEEEeechhH------HHHHHHh
Confidence 4789999998 999999988654321 22334678899999876 5778888
Q ss_pred cCccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--cccc-------ccCC
Q psy7539 81 ETIHIVYHIAATVRF----DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEE-------KTYP 147 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E-------~~~~ 147 (318)
+++|+|||+|+.... ..........|+.||.+++++|.+. ++++|||+||..+++... +.+| ..+.
T Consensus 78 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~ 156 (363)
T d2c5aa1 78 EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDAWPA 156 (363)
T ss_dssp TTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB
T ss_pred hcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-CccccccccccccccccccccccccccccccCCcC
Confidence 899999999987644 3445678899999999999999995 999999999988887532 2222 2222
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
.|. +.|+.||.++|++++.+.+ +|++++++||+++||........+ ..
T Consensus 157 ~p~-----------------------------~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~--~~ 205 (363)
T d2c5aa1 157 EPQ-----------------------------DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGR--EK 205 (363)
T ss_dssp CCS-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSC--CC
T ss_pred CCC-----------------------------CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccc--cc
Confidence 222 8999999999999999988 799999999999999765433211 11
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
..................+++|.+.++|+|++|+|+++..+++... ++.||++++ .++++.|+++.+.+..|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~~------~~~~ni~~~--~~~s~~~l~~~i~~~~g 277 (363)
T d2c5aa1 206 APAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF------REPVNIGSD--EMVSMNEMAEMVLSFEE 277 (363)
T ss_dssp HHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSSC------CSCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred cccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCCC------CCeEEEecC--CcccHHHHHHHHHHHhC
Confidence 1223344444445555678899999999999999999999887643 678999999 89999999999999987
Q ss_pred ccCCC
Q psy7539 307 NKVPL 311 (318)
Q Consensus 307 ~~~p~ 311 (318)
.+.|+
T Consensus 278 ~~~~i 282 (363)
T d2c5aa1 278 KKLPI 282 (363)
T ss_dssp CCCCE
T ss_pred CCCce
Confidence 65543
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=1.9e-27 Score=211.88 Aligned_cols=251 Identities=16% Similarity=0.150 Sum_probs=182.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCC-HHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKN-SRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~-~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ |++|++++|...... ....++ .....+++++++|+++. +.+..+
T Consensus 14 ~~l~~~L~~~--g~~V~~~d~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~Dl~d~------~~l~~~ 68 (338)
T d1udca_ 14 SHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIE-----------------RLGGKHPTFVEGDIRNE------ALMTEI 68 (338)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHH-----------------HHHTSCCEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEECCCCcchhhHHHHH-----------------hhcCCCCEEEEeecCCH------HHHHHH
Confidence 4799999999 999999988543322 211111 12235899999999987 678888
Q ss_pred hc--CccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--cccccc-CCCCCC
Q psy7539 80 SE--TIHIVYHIAATVRFDD---YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKT-YPPPVS 151 (318)
Q Consensus 80 ~~--~~d~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~-~~~p~~ 151 (318)
++ ++|+|||+||...... ....++++|+.||.+|+++|++. ++++||++||..+++... ...|.. ...|.
T Consensus 69 ~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~- 146 (338)
T d1udca_ 69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQ- 146 (338)
T ss_dssp HHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS-
T ss_pred HhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEEccccccccccccccCCCc-
Confidence 77 8999999999765432 34578999999999999999996 899999999988886533 333322 22232
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccccccCCCCCCcccC-C-C
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIIIPIWKDPLPGWTDN-I-N 227 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~-~-~ 227 (318)
+.|+.+|.++|.++..+.. .+++++++|++++||+...+..|.... . .
T Consensus 147 ----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~ 198 (338)
T d1udca_ 147 ----------------------------SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPN 198 (338)
T ss_dssp ----------------------------SHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCC
T ss_pred ----------------------------chHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHH
Confidence 8999999999999987665 589999999999999876544331111 1 1
Q ss_pred chHHHHHHHhcC--ceeeEec------CCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHH
Q psy7539 228 GPTGLLIGAGKG--IIRTMYC------DYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIE 299 (318)
Q Consensus 228 ~~~~~~~~~~~~--~~~~~~~------~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~ 299 (318)
....++.....+ ....+.+ ++.+.++|+||+|++.++..+....... ..+++||++++ .++++.|+++
T Consensus 199 ~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~--~~~~i~Ni~~~--~~~si~e~~~ 274 (338)
T d1udca_ 199 NLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANK--PGVHIYNLGAG--VGNSVLDVVN 274 (338)
T ss_dssp SHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTC--CEEEEEEESCS--SCEEHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhccccccccccc--cCcceeeecCC--CCCcHHHHHH
Confidence 112233332322 2333434 4788899999999999988887765442 13578999999 8999999999
Q ss_pred HHHHhhcccCC
Q psy7539 300 NGKDIARNKVP 310 (318)
Q Consensus 300 ~i~~~~~~~~p 310 (318)
.+.+.+|.+.+
T Consensus 275 ~i~~~~g~~~~ 285 (338)
T d1udca_ 275 AFSKACGKPVN 285 (338)
T ss_dssp HHHHHHTSCCC
T ss_pred HHHHHHCCCCc
Confidence 99999975543
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.95 E-value=3.2e-27 Score=208.67 Aligned_cols=241 Identities=16% Similarity=0.043 Sum_probs=185.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|+++.|..+... .++++.+ ...++++++.+|+++. +.+...+
T Consensus 14 ~~l~~~Ll~~--g~~V~~~~r~~~~~~-~~~l~~~----------------~~~~~~~~~~~Dl~d~------~~~~~~~ 68 (321)
T d1rpna_ 14 AYLAKLLLEK--GYRVHGLVARRSSDT-RWRLREL----------------GIEGDIQYEDGDMADA------CSVQRAV 68 (321)
T ss_dssp HHHHHHHHHT--TCEEEEEECCCSSCC-CHHHHHT----------------TCGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEECCCCccc-HHHHHHh----------------cccCCcEEEEccccCh------HHhhhhh
Confidence 4799999998 999999999765432 2333322 2235899999999986 5677666
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChh
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~ 153 (318)
. ..++++|+|+..... ....+++..|+.||.+++++|++.+..++|++.||..+++... ..+|+.+..|.
T Consensus 69 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~--- 145 (321)
T d1rpna_ 69 IKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR--- 145 (321)
T ss_dssp HHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC---
T ss_pred ccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcccc---
Confidence 5 578999999875433 3356789999999999999999974456788888887776533 66777666665
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCC-chHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNIN-GPTG 231 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~-~~~~ 231 (318)
+.|+.+|.++|+++..+.+ ++++++++||+++||+...+. ... ....
T Consensus 146 --------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~-----~~~~~i~~ 194 (321)
T d1rpna_ 146 --------------------------SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIE-----FVTRKVTD 194 (321)
T ss_dssp --------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTT-----SHHHHHHH
T ss_pred --------------------------ChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCcccc-----ccHHHHHH
Confidence 8999999999999999987 899999999999999653221 111 1123
Q ss_pred HHHHHhcCc-eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 232 LLIGAGKGI-IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 232 ~~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
++.....+. .....+++.+.++|+||+|+|++++.+++++. .+.||++++ +..++.++++.+.+.+|.+
T Consensus 195 ~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~------~~~~ni~~~--~~~s~~~~~~~~~~~~~~~ 264 (321)
T d1rpna_ 195 AVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK------ADDYVVATG--VTTTVRDMCQIAFEHVGLD 264 (321)
T ss_dssp HHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS------CCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred HHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC------cCCceeccc--ccceehhhhHHHHHHhCCC
Confidence 444444443 34567899999999999999999999998765 467999999 8999999999999988654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=4.9e-27 Score=209.34 Aligned_cols=248 Identities=14% Similarity=0.073 Sum_probs=183.6
Q ss_pred ChhHHHHHhhCCC-cEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCEN-VKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~-~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ | ++|+++.+.++.... ....++++++.||+++.. +..+.+
T Consensus 14 ~~l~~~Ll~~--g~~~V~~ld~~~~~~~~----------------------~~~~~~~~~i~~Di~~~~-----~~~~~~ 64 (342)
T d2blla1 14 NHLTERLLRE--DHYEVYGLDIGSDAISR----------------------FLNHPHFHFVEGDISIHS-----EWIEYH 64 (342)
T ss_dssp HHHHHHHHHS--TTCEEEEEESCCGGGGG----------------------GTTCTTEEEEECCTTTCS-----HHHHHH
T ss_pred HHHHHHHHHC--CCCEEEEEeCCCcchhh----------------------hccCCCeEEEECccCChH-----HHHHHH
Confidence 4789999988 6 499999885432210 122368999999998763 334446
Q ss_pred hcCccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCC----CC
Q psy7539 80 SETIHIVYHIAATVRFDD---YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPP----PV 150 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~----p~ 150 (318)
.+++|+|||+|+...... ....++..|+.||.+++++|.+. + .+++++||..+++... ...|..... +.
T Consensus 65 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (342)
T d2blla1 65 VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVN 142 (342)
T ss_dssp HHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTT
T ss_pred HhCCCccccccccccccccccCCccccccccccccccccccccc-c-ccccccccccccccccccccccccccccccccC
Confidence 779999999999865433 33468999999999999999984 5 4667889988877633 333322111 11
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCC-c
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNIN-G 228 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~-~ 228 (318)
.|. +.|+.||.++|+++..+.+ .|++++++|++.++|....+..+-..... .
T Consensus 143 ~p~--------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~ 196 (342)
T d2blla1 143 KPR--------------------------WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRA 196 (342)
T ss_dssp CGG--------------------------GHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHH
T ss_pred CCc--------------------------chhhhcccchhhhhhhhhcccCceeEEeecccccccccccccccccccccc
Confidence 111 7899999999999999988 89999999999999976554322111111 1
Q ss_pred hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 229 PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
...++..++.|....++++|.+.++|+|++|+|+++..+++++... ..+++||++++. .++|+.|+++.+.+.+|..
T Consensus 197 ~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~--~~g~~~Nig~~~-~~~t~~~l~~~i~~~~~~~ 273 (342)
T d2blla1 197 ITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNR--CDGEIINIGNPE-NEASIEELGEMLLASFEKH 273 (342)
T ss_dssp HHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGT--TTTEEEEECCTT-SEEEHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhcccc--CCCeEEEEeccc-chhHHHHHHHHHHHHhCCC
Confidence 2457778888887788899999999999999999999999875431 137899998651 4589999999999988543
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.95 E-value=2.2e-27 Score=211.85 Aligned_cols=262 Identities=16% Similarity=0.067 Sum_probs=179.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+. .+.+...... ........++.+|+.+. +.+..++
T Consensus 25 s~l~~~Ll~~--G~~V~~~vR~~~~---~~~~~~~~~~------------~~~~~~~~~~~~Dl~~~------~~~~~~~ 81 (342)
T d1y1pa1 25 SHVVEQLLEH--GYKVRGTARSASK---LANLQKRWDA------------KYPGRFETAVVEDMLKQ------GAYDEVI 81 (342)
T ss_dssp HHHHHHHHHT--TCEEEEEESSHHH---HHHHHHHHHH------------HSTTTEEEEECSCTTST------TTTTTTT
T ss_pred HHHHHHHHHC--cCEEEEEeCCchh---HHHHHHhhhc------------cccccccEEEeccccch------hhhhhhc
Confidence 3799999999 9999999996322 2233322110 12223456688999887 4677888
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHH-HHH
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVI-EKA 159 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~-~~~ 159 (318)
.++|+|+|+|+..........++..|+.||.+++++|.+.+++++|||+||..+.+...+..+..+.....+.... ...
T Consensus 82 ~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 161 (342)
T d1y1pa1 82 KGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKA 161 (342)
T ss_dssp TTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHH
T ss_pred ccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccc
Confidence 9999999999998777777788999999999999999987679999999997654332211111111111111000 000
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
... ......++.++|+.||..+|++++.+.+ .++.++++||+++||+...+.. .......++..+
T Consensus 162 ~~~--------~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~----~~~~~~~~~~~l 229 (342)
T d1y1pa1 162 KTL--------PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET----QSGSTSGWMMSL 229 (342)
T ss_dssp HHS--------CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTT----CCCHHHHHHHHH
T ss_pred ccc--------cccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccc----cccchHHHHHHH
Confidence 000 0000001117899999999999988876 3578899999999997544321 112345577777
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhh
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~ 305 (318)
..+.... ...+.+.++|+||+|+|++++.+++++.. .+.|+++++ .++++.|+++.+++.+
T Consensus 230 ~~g~~~~-~~~~~~~~~~v~v~Dva~~~i~~l~~~~~-----~g~~~~~~~--~~~t~~eia~~i~k~~ 290 (342)
T d1y1pa1 230 FNGEVSP-ALALMPPQYYVSAVDIGLLHLGCLVLPQI-----ERRRVYGTA--GTFDWNTVLATFRKLY 290 (342)
T ss_dssp HTTCCCH-HHHTCCSEEEEEHHHHHHHHHHHHHCTTC-----CSCEEEECC--EEECHHHHHHHHHHHC
T ss_pred HcCCcCc-ccCCccceeeeeHHHHHHHHHHhhcCccc-----cceEEEEcC--CceEHHHHHHHHHHHc
Confidence 7765432 23566778999999999999999998775 455667777 7999999999999987
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=4.5e-27 Score=209.90 Aligned_cols=249 Identities=14% Similarity=0.009 Sum_probs=181.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+++ |++|++++|..+.... .++..+ +.... .....+++++.+|++++ +.+..++
T Consensus 15 ~~l~~~Ll~~--g~~V~~i~r~~~~~~~-~~~~~~-----~~~~~-----~~~~~~~~~~~~Dl~d~------~~~~~~~ 75 (347)
T d1t2aa_ 15 SYLAEFLLEK--GYEVHGIVRRSSSFNT-GRIEHL-----YKNPQ-----AHIEGNMKLHYGDLTDS------TCLVKII 75 (347)
T ss_dssp HHHHHHHHHT--TCEEEEEECCCSSCCC-TTTGGG-----C--------------CEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEECCCcccch-hhHHHH-----hhchh-----hhccCCcEEEEeecCCc------hhhHHHH
Confidence 4899999998 9999999996542211 011100 00000 22335899999999987 5777777
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcC--CCccEEEEeccccccCCc--ccccccCCCCCC
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMI--HLQLFVYVSTAYCHPKEK--VLEEKTYPPPVS 151 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~ 151 (318)
. ++++|+|+|+..... .....++++|+.||.+|+++|++.. +.++|||+||..+||... +++|+.+..|.
T Consensus 76 ~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~- 154 (347)
T d1t2aa_ 76 NEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR- 154 (347)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCC-
T ss_pred hhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCC-
Confidence 5 678999999976443 3344678999999999999999852 234899999999987633 78887776665
Q ss_pred hhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchH
Q psy7539 152 PHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPT 230 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~ 230 (318)
+.|+.||.++|+++..+.+ .+++++++||+++||+...+... .-....
T Consensus 155 ----------------------------~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~---~~~~~~ 203 (347)
T d1t2aa_ 155 ----------------------------SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFV---TRKISR 203 (347)
T ss_dssp ----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSH---HHHHHH
T ss_pred ----------------------------CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCcc---ccccce
Confidence 8999999999999999877 89999999999999965332110 000012
Q ss_pred HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhccc
Q psy7539 231 GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNK 308 (318)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~ 308 (318)
.+......+......+++.+.++|+||+|+|.+++.++.+.. ...|+++.. ...++.+....+....|..
T Consensus 204 ~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 273 (347)
T d1t2aa_ 204 SVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE------PEDFVIATG--EVHSVREFVEKSFLHIGKT 273 (347)
T ss_dssp HHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS------CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred eeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC------Cccceeccc--cccccchhhhhhhhhhcce
Confidence 233344444445677899999999999999999999998865 457888888 7899999999888777543
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.95 E-value=9.5e-27 Score=207.94 Aligned_cols=253 Identities=16% Similarity=0.106 Sum_probs=180.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCH-HHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNS-RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~-~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
+||+++|+++ |++|.+++|....... ..++. .....+++++.+|+.+. +.+..+
T Consensus 16 s~lv~~L~~~--g~~v~v~~~d~~~~~~~~~~~~-----------------~~~~~~i~~~~~Di~d~------~~~~~~ 70 (346)
T d1oc2a_ 16 SNFVHYVYNN--HPDVHVTVLDKLTYAGNKANLE-----------------AILGDRVELVVGDIADA------ELVDKL 70 (346)
T ss_dssp HHHHHHHHHH--CTTCEEEEEECCCTTCCGGGTG-----------------GGCSSSEEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--CCCeEEEEEeCCCccccHHHHH-----------------HhhcCCeEEEEccCCCH------HHHHHH
Confidence 4799999999 6644444443211100 00000 22345899999999876 688899
Q ss_pred hcCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHH
Q psy7539 80 SETIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVI 156 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~ 156 (318)
+++++.|+|+|+..... ..+.+++++|+.||.+|+++|... + .++|++||..+|+... ..|..+..+..+..
T Consensus 71 ~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss~~vyg~~~-~~~~~~~~~~~~~~-- 145 (346)
T d1oc2a_ 71 AAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVSTDEVYGDLP-LREDLPGHGEGPGE-- 145 (346)
T ss_dssp HTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGGGCCBC-CGGGSTTTTCSTTS--
T ss_pred HhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccccceEecccC-ccccccccccCccc--
Confidence 99999999999986543 233478899999999999999985 4 5899999988886421 11111100000000
Q ss_pred HHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHHH
Q psy7539 157 EKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIG 235 (318)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~ 235 (318)
.....-...+.+.|+.+|+++|+++..+.+ .+++++++||++|||+.... -.....++..
T Consensus 146 ------------~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~-------~~~~~~~i~~ 206 (346)
T d1oc2a_ 146 ------------KFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI-------EKFIPRQITN 206 (346)
T ss_dssp ------------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT-------TSHHHHHHHH
T ss_pred ------------ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCc-------cchhHHHHHH
Confidence 000000011228899999999999999987 89999999999999964321 1123456666
Q ss_pred HhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 236 AGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
...+....+++++.+.++|+|++|+|++++.++.+... ++.||++++ ++.++.++++.+.+.++.+.
T Consensus 207 ~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~ 273 (346)
T d1oc2a_ 207 ILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM-----GETYLIGAD--GEKNNKEVLELILEKMGQPK 273 (346)
T ss_dssp HHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCT-----TCEEEECCS--CEEEHHHHHHHHHHHTTCCT
T ss_pred HHcCCceeEeCCCCccccccchhhHHHHHHHHHhhccc-----Ccccccccc--ccccchHHHHHHHHHhCCCC
Confidence 67777777889999999999999999999999888775 789999999 89999999999999986543
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=1e-25 Score=201.23 Aligned_cols=254 Identities=18% Similarity=0.140 Sum_probs=182.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCH-HHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNS-RERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~-~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
+||+++|+++ |++|+++.|....... ..+.. .....+++++.+|+++. +.+..+
T Consensus 15 ~~lv~~Ll~~--g~~V~~~d~~~~~~~~~~~~~~-----------------~~~~~~v~~~~~Dl~d~------~~l~~~ 69 (347)
T d1z45a2 15 SHTVVELIEN--GYDCVVADNLSNSTYDSVARLE-----------------VLTKHHIPFYEVDLCDR------KGLEKV 69 (347)
T ss_dssp HHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHH-----------------HHHTSCCCEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHHC--cCeEEEEECCCCcchhHHHhHH-----------------hhcccCCeEEEeecCCH------HHHHHH
Confidence 4799999999 9999999875433321 11111 22345899999999986 678877
Q ss_pred hc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc------ccccccCCC
Q psy7539 80 SE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK------VLEEKTYPP 148 (318)
Q Consensus 80 ~~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~------~~~E~~~~~ 148 (318)
++ ++|+|||+||..... .....+..+|+.||.+|+++|++. ++++||++||..+|+... +++|+.+..
T Consensus 70 ~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~ 148 (347)
T d1z45a2 70 FKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFPNMIPIPEECPLG 148 (347)
T ss_dssp HHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC
T ss_pred HhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeeecCcccCCCCCccccccCCC
Confidence 76 899999999986433 234568899999999999999995 999999999999988633 344544444
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccCCCCCCcccC
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWKDPLPGWTDN 225 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~g~~~~ 225 (318)
|. +.|+.||.++|++++.+.+ .+++++++|++.+||....+..|....
T Consensus 149 p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~ 199 (347)
T d1z45a2 149 PT-----------------------------NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPL 199 (347)
T ss_dssp CC-----------------------------SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCS
T ss_pred CC-----------------------------ChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCcc
Confidence 43 8999999999999998865 578999999999999766544332111
Q ss_pred -C-CchHHHHHHHhcCc--eeeEecC------CCcccCcchHHHHHHHHHHHhhhccCCC--CCCCcEEEeeCCCCCcee
Q psy7539 226 -I-NGPTGLLIGAGKGI--IRTMYCD------YSTCADFLPVDVLVNGVLLSTWNFLSNP--GNTMRVINLTANKDFQIT 293 (318)
Q Consensus 226 -~-~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~v~v~Dva~~~~~~~~~~~~~~--~~~~~~~ni~~~~~~~~~ 293 (318)
. .....++.....+. ...+.++ +...+|++++.|++.+++.+++...... ....++||++++ .+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~--~~~s 277 (347)
T d1z45a2 200 GIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG--KGST 277 (347)
T ss_dssp SSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS--CCEE
T ss_pred ccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccccccccccccccccccccccceecCC--Cccc
Confidence 1 11233333433332 2223333 4567789999999999999887643211 123578999999 8999
Q ss_pred HHHHHHHHHHhhcccCCC
Q psy7539 294 WYDIIENGKDIARNKVPL 311 (318)
Q Consensus 294 ~~el~~~i~~~~~~~~p~ 311 (318)
+.|+++.+.+.+|.+.+.
T Consensus 278 ~~e~~~~i~~~~~~~~~~ 295 (347)
T d1z45a2 278 VFEVYHAFCKASGIDLPY 295 (347)
T ss_dssp HHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHHHHCCCCce
Confidence 999999999999766554
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=1.4e-25 Score=203.70 Aligned_cols=250 Identities=14% Similarity=0.028 Sum_probs=176.0
Q ss_pred ChhHHHHHhhCCCcEEEEEE---c-----------cCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCC
Q psy7539 1 KVLLEKILRTCENVKIYILL---R-----------PKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAV 66 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~---R-----------~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~ 66 (318)
+||+++|+++ |++|+++. | ..+.....+++.... .....+++++.|||++
T Consensus 15 ~~lv~~Ll~~--g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~i~~~~~Dl~d 78 (393)
T d1i24a_ 15 WATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK--------------ALTGKSIELYVGDICD 78 (393)
T ss_dssp HHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHH--------------HHHCCCCEEEESCTTS
T ss_pred HHHHHHHHHC--cCEEEEEecCCcccccccccccccccccchHHHHHHHH--------------hhcCCCcEEEEccCCC
Confidence 3799999998 99999984 1 112222222222110 2234689999999998
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcccccCcc------hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCC
Q psy7539 67 PDLGISAEDRQMLSE--TIHIVYHIAATVRFD------DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKE 138 (318)
Q Consensus 67 ~~~gl~~~~~~~~~~--~~d~Vih~Aa~~~~~------~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~ 138 (318)
. +.+..+++ ++|+|||+||..... .....++.+|+.||.+++++|++....++|++.||..+++..
T Consensus 79 ~------~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~ 152 (393)
T d1i24a_ 79 F------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTP 152 (393)
T ss_dssp H------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCC
T ss_pred H------HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccc
Confidence 7 67888877 579999999975322 223468899999999999999997344567777777666543
Q ss_pred c-cccccc-----------CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEE
Q psy7539 139 K-VLEEKT-----------YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMI 205 (318)
Q Consensus 139 ~-~~~E~~-----------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~i 205 (318)
. +..|.. .+.|.. +.+.|+.||+++|.++..+.+ +++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~ 206 (393)
T d1i24a_ 153 NIDIEEGYITITHNGRTDTLPYPKQ--------------------------ASSFYHLSKVHDSHNIAFTCKAWGIRATD 206 (393)
T ss_dssp SSCBCSSEEEEEETTEEEEEECCCC--------------------------CCSHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred ccccccccccccccccccccccccc--------------------------cccHHHHHhhhhcccccccccccceeeee
Confidence 2 222211 111111 128899999999999999887 8999999
Q ss_pred ecccccccccCCCCCC--c------ccCCCc--hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCC
Q psy7539 206 LRPSIIIPIWKDPLPG--W------TDNING--PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNP 275 (318)
Q Consensus 206 lR~~~v~G~~~~~~~g--~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~ 275 (318)
+||+++||+...+... . ....++ ...++.....+....+++++.+.+||+||+|+|.++..++++...
T Consensus 207 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~-- 284 (393)
T d1i24a_ 207 LNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK-- 284 (393)
T ss_dssp EEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC--
T ss_pred cccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcc--
Confidence 9999999976543210 0 001111 245777777887778889999999999999999999999988765
Q ss_pred CCCCcEEEe--eCCCCCceeHHHHHHHHHHhh
Q psy7539 276 GNTMRVINL--TANKDFQITWYDIIENGKDIA 305 (318)
Q Consensus 276 ~~~~~~~ni--~~~~~~~~~~~el~~~i~~~~ 305 (318)
.+.|++ +++ +.+++.++++++.+..
T Consensus 285 ---~g~~~~~~~~~--~~~si~el~~~i~~~~ 311 (393)
T d1i24a_ 285 ---AGEFRVFNQFT--EQFSVNELASLVTKAG 311 (393)
T ss_dssp ---TTCEEEEEECS--EEEEHHHHHHHHHHHH
T ss_pred ---cceeeeecCCC--CeeEHHHHHHHHHHHH
Confidence 233333 333 5799999999998876
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=6e-25 Score=196.07 Aligned_cols=252 Identities=15% Similarity=0.124 Sum_probs=178.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCC-------CCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKN-------KNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISA 73 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~-------~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~ 73 (318)
++|+++|+++ |++|+++.|.... ....+++. .....+++++.+|+++.
T Consensus 16 s~lv~~Ll~~--g~~V~~ld~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~Dl~d~------ 70 (346)
T d1ek6a_ 16 SHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQ-----------------ELTGRSVEFEEMDILDQ------ 70 (346)
T ss_dssp HHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHH-----------------HHHTCCCEEEECCTTCH------
T ss_pred HHHHHHHHHC--cCEEEEEECCCccccccccchHHHHHHH-----------------HhcCCCcEEEEeecccc------
Confidence 4799999998 9999999753211 11122222 12346899999999986
Q ss_pred HHHHHHhc--CccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCccc-c--ccc
Q psy7539 74 EDRQMLSE--TIHIVYHIAATVRFDD---YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVL-E--EKT 145 (318)
Q Consensus 74 ~~~~~~~~--~~d~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~-~--E~~ 145 (318)
+.+..++. ++++|+|+||..+... .+.+.++.|+.||.+++++|++. ++++|+|+||..+++..... . +..
T Consensus 71 ~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ss~~~~~~~~~~~~~~~~~ 149 (346)
T d1ek6a_ 71 GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNPQYLPLDEAHP 149 (346)
T ss_dssp HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred ccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Ccccccccccceeeecccccccccccc
Confidence 57777665 6778999999865432 24578899999999999999995 99999999998888764411 1 111
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccccccCCCCCCcc
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIIIPIWKDPLPGWT 223 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~ 223 (318)
...|. ++|+.+|..+|+.+..+.+ .+++.+++|++++||.......++.
T Consensus 150 ~~~~~-----------------------------~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~ 200 (346)
T d1ek6a_ 150 TGGCT-----------------------------NPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGED 200 (346)
T ss_dssp CCCCS-----------------------------SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCC
T ss_pred ccccC-----------------------------ChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCcc
Confidence 12222 8899999999999998766 5899999999999998655433221
Q ss_pred c-CCC-chHHHHHHHh--cCceeeEe------cCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 224 D-NIN-GPTGLLIGAG--KGIIRTMY------CDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 224 ~-~~~-~~~~~~~~~~--~~~~~~~~------~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
. ... .....+.... .+....+. .++.+.++|+|++|+|.++..++...... ...++||++++ .+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~--~~~~i~Ni~~~--~~~s 276 (346)
T d1ek6a_ 201 PQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQ--CGCRIYNLGTG--TGYS 276 (346)
T ss_dssp CSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTT--CCEEEEEECCS--CCEE
T ss_pred ccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccc--cCceEEEeCCC--Cccc
Confidence 1 111 1122222222 23332332 35677899999999999999887664432 13679999999 8999
Q ss_pred HHHHHHHHHHhhcccCCC
Q psy7539 294 WYDIIENGKDIARNKVPL 311 (318)
Q Consensus 294 ~~el~~~i~~~~~~~~p~ 311 (318)
+.|+++.+.+.+|.+.|.
T Consensus 277 ~~dl~~~i~~~~~~~~~~ 294 (346)
T d1ek6a_ 277 VLQMVQAMEKASGKKIPY 294 (346)
T ss_dssp HHHHHHHHHHHHCSCCCE
T ss_pred HHHHHHHHHHHhCCCCCe
Confidence 999999999999766553
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.93 E-value=7.7e-25 Score=194.53 Aligned_cols=247 Identities=13% Similarity=0.023 Sum_probs=177.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||++.|+++ |++|++++|..+.... +++...... .. ......++++.+|+++. +.+...+
T Consensus 15 ~~lv~~Ll~~--g~~V~~~~r~~~~~~~-~~~~~~~~~-----~~-----~~~~~~~~~~~~Di~~~------~~~~~~~ 75 (339)
T d1n7ha_ 15 SYLTEFLLGK--GYEVHGLIRRSSNFNT-QRINHIYID-----PH-----NVNKALMKLHYADLTDA------SSLRRWI 75 (339)
T ss_dssp HHHHHHHHHT--TCEEEEEECCCSSCCC-TTTTTTC------------------CCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEECCCcccch-hhhhhhhhh-----hh-----hccccceEEEEccccCH------HHHHHHH
Confidence 4899999999 9999999997542110 011000000 00 11234688999999876 5677666
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCc-ccccccCCCCC
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEK-VLEEKTYPPPV 150 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~-~~~E~~~~~p~ 150 (318)
+ ++|+|||+||..... ..+......|+.|+.+++++++.. ....++++.||.++++... ..+|+.+..|.
T Consensus 76 ~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~ 155 (339)
T d1n7ha_ 76 DVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPR 155 (339)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCC
T ss_pred hhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCc
Confidence 5 789999999986544 234578899999999999998753 1344678888887776644 67887766665
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCc-
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNING- 228 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~- 228 (318)
+.|+.+|+++|+++..+.+ ++++++++||++|||+...+. ....
T Consensus 156 -----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~-----~~~~~ 201 (339)
T d1n7ha_ 156 -----------------------------SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGEN-----FVTRK 201 (339)
T ss_dssp -----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTT-----SHHHH
T ss_pred -----------------------------chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCC-----CCcch
Confidence 9999999999999999988 899999999999999653311 0011
Q ss_pred hHHHHHHHhc-CceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcc
Q psy7539 229 PTGLLIGAGK-GIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARN 307 (318)
Q Consensus 229 ~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~ 307 (318)
....+..... .......+++.+.++|+|++|+|+++..++.++.. ..+++..+ ...++.++++.+.+.+|.
T Consensus 202 i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~~------~~~~~~~~--~~~s~~~~~~~~~~~~~~ 273 (339)
T d1n7ha_ 202 ITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP------DDYVVATE--EGHTVEEFLDVSFGYLGL 273 (339)
T ss_dssp HHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSSC------CEEEECCS--CEEEHHHHHHHHHHHTTC
T ss_pred hhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcCCC------Cccccccc--cccccchhhhhhhhhhhc
Confidence 1112223333 33445678899999999999999999999998763 45666666 689999999999998865
Q ss_pred c
Q psy7539 308 K 308 (318)
Q Consensus 308 ~ 308 (318)
.
T Consensus 274 ~ 274 (339)
T d1n7ha_ 274 N 274 (339)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.93 E-value=2.1e-24 Score=195.12 Aligned_cols=265 Identities=15% Similarity=0.112 Sum_probs=178.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccC---C---CCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPK---K---NKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAE 74 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~---~---~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~ 74 (318)
+||+++||++ .+++|+++.+-. . .....+.+...++... ... ......++.++.+|+++. +
T Consensus 16 s~lv~~LL~~-~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~Di~d~------~ 82 (383)
T d1gy8a_ 16 SHFVRALLRD-TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD----GPK--PPWADRYAALEVGDVRNE------D 82 (383)
T ss_dssp HHHHHHHHHH-CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSC----SSC--CTTTTCCCEEEESCTTCH------H
T ss_pred HHHHHHHHHh-CCCEEEEEecCCcccccchhhhhhhhHHHHhhhhc----ccc--ccccccceEEEECcccCH------H
Confidence 4799999987 588999986421 1 1111122211111000 000 012234788999999986 5
Q ss_pred HHHHHhc---CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc---------
Q psy7539 75 DRQMLSE---TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--------- 139 (318)
Q Consensus 75 ~~~~~~~---~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--------- 139 (318)
.+..+++ ++|+|||+|+..... ......++.|+.+|.+++++|++. ++++++++||..+++...
T Consensus 83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred Hhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCccccccccccccccccccccccccc
Confidence 6777764 679999999986543 233467889999999999999995 899999999987766422
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCC
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~ 218 (318)
++.|+....|. +.|+.+|+++|+++..+.+ +|++++++|++++||+...+
T Consensus 162 ~~~e~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~ 212 (383)
T d1gy8a_ 162 PIDINAKKSPE-----------------------------SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDG 212 (383)
T ss_dssp CBCTTSCCBCS-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTS
T ss_pred ccccccCCCCC-----------------------------CHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccc
Confidence 23343333343 8999999999999999988 89999999999999987654
Q ss_pred CC-CcccCCCchH-----HHHHHH------------hcCceeeEe------cCCCcccCcchHHHHHHHHHHHhhhccCC
Q psy7539 219 LP-GWTDNINGPT-----GLLIGA------------GKGIIRTMY------CDYSTCADFLPVDVLVNGVLLSTWNFLSN 274 (318)
Q Consensus 219 ~~-g~~~~~~~~~-----~~~~~~------------~~~~~~~~~------~~~~~~~~~v~v~Dva~~~~~~~~~~~~~ 274 (318)
.. .+..+..... .++... ..+....+. ++|.+.++|+||+|+|++++.+++.....
T Consensus 213 ~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~ 292 (383)
T d1gy8a_ 213 DIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKL 292 (383)
T ss_dssp SCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTC
T ss_pred cccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccc
Confidence 32 1111111111 111111 112222222 35788899999999999999998764321
Q ss_pred C----CCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 275 P----GNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 275 ~----~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
. ....++||++++ +++++.|+++.+.+.+|.+.+
T Consensus 293 ~~~~~~~~~~i~Ni~s~--~~~s~~el~~~i~~~~~~~~~ 330 (383)
T d1gy8a_ 293 GPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHPIP 330 (383)
T ss_dssp CTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCCCC
T ss_pred cccccccCccEEEeCCC--CceeHHHHHHHHHHHhCCCCc
Confidence 1 113579999999 899999999999999865543
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.91 E-value=1.7e-23 Score=185.31 Aligned_cols=256 Identities=14% Similarity=0.101 Sum_probs=177.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+||+++|+++ |++|+++.+-.. ....+++... ....+++++.||+++. +.+..++
T Consensus 14 s~lv~~Ll~~--g~~V~~id~~~~-~~~~~~~~~~----------------~~~~~~~~i~~Di~~~------~~l~~~~ 68 (338)
T d1orra_ 14 SNLASFALSQ--GIDLIVFDNLSR-KGATDNLHWL----------------SSLGNFEFVHGDIRNK------NDVTRLI 68 (338)
T ss_dssp HHHHHHHHHT--TCEEEEEECCCS-TTHHHHHHHH----------------HTTCCCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEECCCc-ccchhHHHHh----------------hccCCcEEEEcccCCH------HHHHHHH
Confidence 4899999999 999999875432 2233333322 1235899999999986 5788887
Q ss_pred c--CccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccc-cCCc--ccccccC-----C
Q psy7539 81 E--TIHIVYHIAATVRFDD---YMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCH-PKEK--VLEEKTY-----P 147 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~-~~~~--~~~E~~~-----~ 147 (318)
+ ++|+|||+|+.+.... .+..+.++|+.||.+|+++|.+. +++++++.||..++ +... +..+... .
T Consensus 69 ~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~ 147 (338)
T d1orra_ 69 TKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVD 147 (338)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETT
T ss_pred HhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccccccccccccccccccccc
Confidence 6 4699999999875543 34578999999999999999996 77777666664443 3322 1111110 0
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
.|.... ..-...+.+.|+.+|..+|.++..+.+ +++...++|+..+||....+.. .
T Consensus 148 ~~~~~~------------------~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 204 (338)
T d1orra_ 148 KPNGYD------------------ESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY-----D 204 (338)
T ss_dssp CTTCBC------------------TTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBT-----T
T ss_pred cccCcc------------------cCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccc-----c
Confidence 110000 000011227899999999999999888 8999999999999986544321 1
Q ss_pred Cch-HHHHHHHh-----cCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHH
Q psy7539 227 NGP-TGLLIGAG-----KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIEN 300 (318)
Q Consensus 227 ~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~ 300 (318)
.+. ..++.... .+....++++|.+.++|+|++|+|++++.++.+.... .+++||+..+...++++.|+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~---~~~~~~i~~~~~~~~s~~e~~~~ 281 (338)
T d1orra_ 205 QGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKI---RGNAFNIGGTIVNSLSLLELFKL 281 (338)
T ss_dssp BCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHH---TTCEEEESSCGGGEEEHHHHHHH
T ss_pred ccccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhccccc---cCccccccccccccccHHHHHHH
Confidence 111 23333332 2455567889999999999999999999999764421 37899996543367999999999
Q ss_pred HHHhhccc
Q psy7539 301 GKDIARNK 308 (318)
Q Consensus 301 i~~~~~~~ 308 (318)
+.+..|.+
T Consensus 282 i~~~~~~~ 289 (338)
T d1orra_ 282 LEDYCNID 289 (338)
T ss_dssp HHHHHTCC
T ss_pred HHHHHCCC
Confidence 99998654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=2.5e-23 Score=182.95 Aligned_cols=206 Identities=14% Similarity=0.092 Sum_probs=152.2
Q ss_pred HHHHHHhc--CccEEEEcccccCcc----hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--cccccc
Q psy7539 74 EDRQMLSE--TIHIVYHIAATVRFD----DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKT 145 (318)
Q Consensus 74 ~~~~~~~~--~~d~Vih~Aa~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~ 145 (318)
+.+..+++ ++|.|+|+|+..... ....+++++|+.||.+|+++|.+. ++++|||+||.++|+... +++|+.
T Consensus 44 ~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~vyg~~~~~~~~E~~ 122 (315)
T d1e6ua_ 44 RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAESE 122 (315)
T ss_dssp HHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCGGG
T ss_pred HHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceEcCCCCCCCccCCc
Confidence 45666654 689999999876432 334568899999999999999996 999999999999998643 566654
Q ss_pred CCC--CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCc
Q psy7539 146 YPP--PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 146 ~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
+.. |..++ +.|+.||.++|+++..+.+ .|++++++||++|||+........
T Consensus 123 ~~~~~~~~~~--------------------------~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~ 176 (315)
T d1e6ua_ 123 LLQGTLEPTN--------------------------EPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSN 176 (315)
T ss_dssp TTSSCCCGGG--------------------------HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTC
T ss_pred cccCCCCCCC--------------------------CHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccc
Confidence 322 11111 5799999999999999987 899999999999999765432110
Q ss_pred ccC--CCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCC----CCCCCcEEEeeCCCCCceeHHH
Q psy7539 223 TDN--INGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSN----PGNTMRVINLTANKDFQITWYD 296 (318)
Q Consensus 223 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~----~~~~~~~~ni~~~~~~~~~~~e 296 (318)
..- .............+......+++...++|+|++|++.++..++.+.... .......+|++.+ .+.++.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~ 254 (315)
T d1e6ua_ 177 SHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTG--VDCTIRE 254 (315)
T ss_dssp SSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCS--CCEEHHH
T ss_pred cccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhccccccccccccccccccCCC--cchHHHH
Confidence 000 0011224455555666677889999999999999999999988654310 0123578999988 8999999
Q ss_pred HHHHHHHhhccc
Q psy7539 297 IIENGKDIARNK 308 (318)
Q Consensus 297 l~~~i~~~~~~~ 308 (318)
+++.+.+.+|.+
T Consensus 255 ~~~~i~~~~~~~ 266 (315)
T d1e6ua_ 255 LAQTIAKVVGYK 266 (315)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHhCCC
Confidence 999999998654
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=9.8e-22 Score=165.36 Aligned_cols=194 Identities=17% Similarity=0.121 Sum_probs=146.8
Q ss_pred ChhHHHHHhhCCCc-EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENV-KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~-~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
++|+++|+++ +.+ +|++++|++.... .....++++..+|+.+. +.+...
T Consensus 28 ~~l~~~Ll~~-g~~~~v~~~~R~~~~~~-----------------------~~~~~~i~~~~~D~~~~------~~~~~~ 77 (232)
T d2bkaa1 28 RVLLKEILEQ-GLFSKVTLIGRRKLTFD-----------------------EEAYKNVNQEVVDFEKL------DDYASA 77 (232)
T ss_dssp HHHHHHHHHH-TCCSEEEEEESSCCCCC-----------------------SGGGGGCEEEECCGGGG------GGGGGG
T ss_pred HHHHHHHHhC-CCCCEEEEEecChhhhc-----------------------ccccceeeeeeeccccc------cccccc
Confidence 4799999999 333 9999999765432 23346888889999875 578888
Q ss_pred hcCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHH
Q psy7539 80 SETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKA 159 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~ 159 (318)
++++|+|||+||..........+.++|+.++.+++++|.+. ++++|||+||..++...
T Consensus 78 ~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~~~~--------------------- 135 (232)
T d2bkaa1 78 FQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSS--------------------- 135 (232)
T ss_dssp GSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC---------------------
T ss_pred ccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccCCccccccCc---------------------
Confidence 89999999999987666667788999999999999999995 89999999998775421
Q ss_pred hhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCC-cEEEecccccccccCCCCCCcccCCCchHH-HHHHHh
Q psy7539 160 ELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGM-PCMILRPSIIIPIWKDPLPGWTDNINGPTG-LLIGAG 237 (318)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~-~~~~~~ 237 (318)
.+.|+.+|+.+|+.+... ++ +++|+||+.+||..... .+.. ++....
T Consensus 136 -------------------~~~Y~~~K~~~E~~l~~~---~~~~~~IlRP~~i~G~~~~~---------~~~~~~~~~~~ 184 (232)
T d2bkaa1 136 -------------------NFLYLQVKGEVEAKVEEL---KFDRYSVFRPGVLLCDRQES---------RPGEWLVRKFF 184 (232)
T ss_dssp -------------------SSHHHHHHHHHHHHHHTT---CCSEEEEEECCEEECTTGGG---------SHHHHHHHHHH
T ss_pred -------------------cchhHHHHHHhhhccccc---cccceEEecCceeecCCCcC---------cHHHHHHHHHh
Confidence 178999999999998776 55 48999999999964321 1222 223333
Q ss_pred cCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 238 KGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ...+......||++|+|++++.++.++.. .+.+.+.+.
T Consensus 185 ~~-----~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-----~~~~i~~~~ 224 (232)
T d2bkaa1 185 GS-----LPDSWASGHSVPVVTVVRAMLNNVVRPRD-----KQMELLENK 224 (232)
T ss_dssp CS-----CCTTGGGGTEEEHHHHHHHHHHHHTSCCC-----SSEEEEEHH
T ss_pred hc-----cCCcccCCCeEEHHHHHHHHHHHHhcCcc-----CCeEEEcHH
Confidence 22 12334455679999999999999888765 567777644
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.87 E-value=9.4e-21 Score=168.95 Aligned_cols=247 Identities=14% Similarity=0.060 Sum_probs=173.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|+++.|.++..... + .. ....++++++.+|++++ +.+.+++
T Consensus 22 s~lv~~Ll~~--g~~V~~~~r~~~~~~~~--~---------~~-------~~~~~~i~~~~~Dl~d~------~~l~~~~ 75 (356)
T d1rkxa_ 22 GWLSLWLQTM--GATVKGYSLTAPTVPSL--F---------ET-------ARVADGMQSEIGDIRDQ------NKLLESI 75 (356)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCSSSSCH--H---------HH-------TTTTTTSEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCCCccHHH--H---------hh-------hhcccCCeEEEeeccCh------Hhhhhhh
Confidence 3789999999 99999999986654321 0 00 22345899999999986 5677776
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc---ccccccCCCCCCh
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK---VLEEKTYPPPVSP 152 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~---~~~E~~~~~p~~~ 152 (318)
+ .+|+|+|+||..... ..+..++.+|+.|+.+++++|...+..+.+++.||...+.... +..|.....|.
T Consensus 76 ~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~-- 153 (356)
T d1rkxa_ 76 REFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY-- 153 (356)
T ss_dssp HHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS--
T ss_pred hhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCC--
Confidence 5 679999999986443 3345789999999999999999874555566666655544322 34444433443
Q ss_pred hHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----------cCCcEEEecccccccccCCCCCCc
Q psy7539 153 HNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----------AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----------~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
+.|+.+|..+|..+..+.. .++.++++||+.+||+...+.
T Consensus 154 ---------------------------~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~--- 203 (356)
T d1rkxa_ 154 ---------------------------DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL--- 203 (356)
T ss_dssp ---------------------------SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS---
T ss_pred ---------------------------CccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh---
Confidence 8999999999988876543 367899999999999764321
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHH
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGK 302 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~ 302 (318)
. .....++.... +....+.+.+.+.++++|++|+|.+++.++.+............+........+++.++++.+.
T Consensus 204 --~-~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 279 (356)
T d1rkxa_ 204 --D-RIVPDILRAFE-QSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMV 279 (356)
T ss_dssp --S-CHHHHHHHHHH-TTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHH
T ss_pred --h-HHHHHHHHHHh-CCCceEEeeccccccccccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhH
Confidence 1 11233444444 4445678899999999999999999999998765421111233333322126799999999999
Q ss_pred HhhcccC
Q psy7539 303 DIARNKV 309 (318)
Q Consensus 303 ~~~~~~~ 309 (318)
+.+|...
T Consensus 280 ~~~~~~~ 286 (356)
T d1rkxa_ 280 KYWGEGA 286 (356)
T ss_dssp HHHCTTC
T ss_pred HHhCCCc
Confidence 9986543
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.85 E-value=2.7e-20 Score=160.31 Aligned_cols=209 Identities=15% Similarity=0.057 Sum_probs=161.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|.++ |++|+++.|+ .+|+.+. +.+.+++
T Consensus 15 ~~l~~~L~~~--g~~Vi~~~r~--------------------------------------~~D~~d~------~~~~~~l 48 (281)
T d1vl0a_ 15 REIQKQLKGK--NVEVIPTDVQ--------------------------------------DLDITNV------LAVNKFF 48 (281)
T ss_dssp HHHHHHHTTS--SEEEEEECTT--------------------------------------TCCTTCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCEEEEeech--------------------------------------hccCCCH------HHHHHHH
Confidence 3688888887 8999998773 2356554 5667776
Q ss_pred c--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc--ccccccCCCCCChh
Q psy7539 81 E--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK--VLEEKTYPPPVSPH 153 (318)
Q Consensus 81 ~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~--~~~E~~~~~p~~~~ 153 (318)
+ ++|+|||+|+..... ..+......|+..+.++.+.+.. ....++++||..+++... +..|.....|.
T Consensus 49 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~--- 123 (281)
T d1vl0a_ 49 NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYS--VGAEIVQISTDYVFDGEAKEPITEFDEVNPQ--- 123 (281)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHH--HTCEEEEEEEGGGSCSCCSSCBCTTSCCCCC---
T ss_pred HHcCCCEEEeeccccccccccccchhhccccccccccccccccc--ccccccccccceeeeccccccccccccccch---
Confidence 5 789999999986533 33456788899999999999886 456788888877776543 66776665554
Q ss_pred HHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHH
Q psy7539 154 NVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLL 233 (318)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (318)
+.|+.+|..+|+++..+ +.+.+++||+++||...+ ....++
T Consensus 124 --------------------------~~~~~~k~~~e~~~~~~---~~~~~i~R~~~vyG~~~~----------~~~~~~ 164 (281)
T d1vl0a_ 124 --------------------------SAYGKTKLEGENFVKAL---NPKYYIVRTAWLYGDGNN----------FVKTMI 164 (281)
T ss_dssp --------------------------SHHHHHHHHHHHHHHHH---CSSEEEEEECSEESSSSC----------HHHHHH
T ss_pred --------------------------hhhhhhhhHHHHHHHHh---CCCccccceeEEeCCCcc----------cccchh
Confidence 89999999999998877 779999999999996421 223456
Q ss_pred HHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 234 IGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
.....+....+. +++.++++|++|+|+++..++++.. .+.||++++ +.+|+.|+++.+.+.+|.+.
T Consensus 165 ~~~~~~~~~~~~--~~~~~~~i~v~D~~~~~~~~~~~~~------~g~~~~~~~--~~~s~~e~~~~i~~~~g~~~ 230 (281)
T d1vl0a_ 165 NLGKTHDELKVV--HDQVGTPTSTVDLARVVLKVIDEKN------YGTFHCTCK--GICSWYDFAVEIFRLTGIDV 230 (281)
T ss_dssp HHHHHCSEEEEE--SSCEECCEEHHHHHHHHHHHHHHTC------CEEEECCCB--SCEEHHHHHHHHHHHHCCCC
T ss_pred hhhccCCceeec--CCceeccchhhhhhhhhhhhhhhcc------cCceeEeCC--CccchHHHHHHHHHHhCCCc
Confidence 666666544443 4689999999999999999998865 469999999 89999999999999997653
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=3.6e-20 Score=152.68 Aligned_cols=187 Identities=13% Similarity=0.020 Sum_probs=142.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.+... .....+++++.||++++ +++.+++
T Consensus 17 ~~v~~~Ll~~--g~~V~~~~R~~~~~~-----------------------~~~~~~~~~~~gD~~d~------~~l~~al 65 (205)
T d1hdoa_ 17 LTTLAQAVQA--GYEVTVLVRDSSRLP-----------------------SEGPRPAHVVVGDVLQA------ADVDKTV 65 (205)
T ss_dssp HHHHHHHHHT--TCEEEEEESCGGGSC-----------------------SSSCCCSEEEESCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--cCEEEEEEcChhhcc-----------------------cccccccccccccccch------hhHHHHh
Confidence 4789999998 999999999754321 22335799999999987 6899999
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|+|||++|......+ ...+..++.+++++|++. ++++||++||.+++........ .
T Consensus 66 ~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~~~~~~-----~----------- 124 (205)
T d1hdoa_ 66 AGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTKVPP-----R----------- 124 (205)
T ss_dssp TTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTCSCG-----G-----------
T ss_pred cCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCCccccc-----c-----------
Confidence 999999999987533222 245678999999999996 9999999999877654221100 0
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
...|...|..+|+++.+. +++++++||+.+++.... +.
T Consensus 125 ------------------~~~~~~~~~~~e~~l~~~---~~~~tiirp~~~~~~~~~---------------------~~ 162 (205)
T d1hdoa_ 125 ------------------LQAVTDDHIRMHKVLRES---GLKYVAVMPPHIGDQPLT---------------------GA 162 (205)
T ss_dssp ------------------GHHHHHHHHHHHHHHHHT---CSEEEEECCSEEECCCCC---------------------SC
T ss_pred ------------------ccccchHHHHHHHHHHhc---CCceEEEecceecCCCCc---------------------cc
Confidence 056888999999988764 899999999988764321 11
Q ss_pred eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeC
Q psy7539 241 IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTA 286 (318)
Q Consensus 241 ~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~ 286 (318)
..+..++.....+++++|+|++++.+++++.- .++.+.++.
T Consensus 163 -~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~----~g~~~~~s~ 203 (205)
T d1hdoa_ 163 -YTVTLDGRGPSRVISKHDLGHFMLRCLTTDEY----DGHSTYPSH 203 (205)
T ss_dssp -CEEESSSCSSCSEEEHHHHHHHHHHTTSCSTT----TTCEEEEEC
T ss_pred -EEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCC----CCEEEecCC
Confidence 23455777888999999999999999988764 367777654
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.81 E-value=5.4e-19 Score=153.99 Aligned_cols=228 Identities=10% Similarity=0.010 Sum_probs=159.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+........ ..... .....+++++.+|+.+. +.+...+
T Consensus 17 ~~l~~~L~~~--G~~V~~~~R~~~~~~~~~-~~~~~--------------~~~~~~v~~v~~d~~d~------~~~~~~~ 73 (312)
T d1qyda_ 17 KRIVNASISL--GHPTYVLFRPEVVSNIDK-VQMLL--------------YFKQLGAKLIEASLDDH------QRLVDAL 73 (312)
T ss_dssp HHHHHHHHHT--TCCEEEECCSCCSSCHHH-HHHHH--------------HHHTTTCEEECCCSSCH------HHHHHHH
T ss_pred HHHHHHHHhC--CCEEEEEECCCcccchhH-HHHHh--------------hhccCCcEEEEeecccc------hhhhhhc
Confidence 4789999998 999999999876554321 11110 11235799999999986 6788888
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
++++.++|+++.... ..|..++.+++++|.+. ...++++.||.++.... +.....|.
T Consensus 74 ~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~~~~----~~~~~~~~---------- 130 (312)
T d1qyda_ 74 KQVDVVISALAGGVL--------SHHILEQLKLVEAIKEA-GNIKRFLPSEFGMDPDI----MEHALQPG---------- 130 (312)
T ss_dssp TTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHS-CCCSEEECSCCSSCTTS----CCCCCSST----------
T ss_pred cCcchhhhhhhhccc--------ccchhhhhHHHHHHHHh-cCCcEEEEeeccccCCC----cccccchh----------
Confidence 999999999986432 34667788899999985 77788888886554321 11111111
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
..|..+|..+++.... .+++++++||+.++|........+..... ..+.
T Consensus 131 -------------------~~~~~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~---------~~~~ 179 (312)
T d1qyda_ 131 -------------------SITFIDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMM---------PPRD 179 (312)
T ss_dssp -------------------THHHHHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSS---------CCSS
T ss_pred -------------------hhhhHHHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhh---------hccc
Confidence 5666666666665443 48999999999999975443322111111 1223
Q ss_pred eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccCC
Q psy7539 241 IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKVP 310 (318)
Q Consensus 241 ~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~p 310 (318)
...+++++++.++|+|++|+|++++.++.++... ....|+++++ ..+|++|+++.+.+..|.+.+
T Consensus 180 ~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~---~~~~~~~~~~--~~~s~~e~~~~~~~~~g~~~~ 244 (312)
T d1qyda_ 180 KVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTL---NKTMYIRPPM--NILSQKEVIQIWERLSEQNLD 244 (312)
T ss_dssp EECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGS---SSEEECCCGG--GEEEHHHHHHHHHHHHTCCCE
T ss_pred ccccccccccccceeeHHHHHHHHHHHhcCcccc---CceEEEeCCC--cCCCHHHHHHHHHHHHCCCCe
Confidence 3456788999999999999999999999887652 1335667766 689999999999999876543
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=3.1e-19 Score=155.13 Aligned_cols=184 Identities=15% Similarity=0.126 Sum_probs=126.2
Q ss_pred cCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccC-Cc-ccccccCCCCCChhHHHH
Q psy7539 81 ETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPK-EK-VLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~-~~-~~~E~~~~~p~~~~~~~~ 157 (318)
..+++|+|+|+.... ..+.......|+.++.+++++++.. +++ +++.||..++.. .. ...|.....|.
T Consensus 67 ~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~------- 137 (307)
T d1eq2a_ 67 GDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGGRTSDFIESREYEKPL------- 137 (307)
T ss_dssp SSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTTCCSCBCSSGGGCCCS-------
T ss_pred cchhhhhhhcccccccccccccccccccccccccccccccc-ccc-ccccccccccccccccccccccccccc-------
Confidence 368999999997543 3445568888999999999999985 664 666666555543 22 33333333333
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-cCCcEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
+.|+.+|.++|.++..+.+ .+++++++||+++||+....... .-.....++..+
T Consensus 138 ----------------------~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~---~~~~~~~~~~~~ 192 (307)
T d1eq2a_ 138 ----------------------NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS---MASVAFHLNTQL 192 (307)
T ss_dssp ----------------------SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGG---GSCHHHHHHHHH
T ss_pred ----------------------cccccccchhhhhccccccccccccccccceeEeecccccccc---cccccccccccc
Confidence 8999999999999999988 89999999999999975432110 001123455556
Q ss_pred hcCceee-EecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhc
Q psy7539 237 GKGIIRT-MYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIAR 306 (318)
Q Consensus 237 ~~~~~~~-~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~ 306 (318)
..+.... ..+++...++|+|++|++.++..++.+.. ...||++++ .+.+++|+++.+.+..+
T Consensus 193 ~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~------~~~~~~~~~--~~~si~~i~~~i~~~~~ 255 (307)
T d1eq2a_ 193 NNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV------SGIFNLGTG--RAESFQAVADATLAYHK 255 (307)
T ss_dssp HC-------------CBCEEEHHHHHHHHHHHHHHCC------CEEEEESCS--CCBCHHHHHHHC-----
T ss_pred ccccceeeecCccceeeeeeecccHHHHHHHHhhhcc------ccccccccc--cchhHHHHHHHHHHhcC
Confidence 6554433 35788899999999999999999998754 579999999 89999999999987763
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.78 E-value=1.6e-18 Score=150.17 Aligned_cols=222 Identities=8% Similarity=0.023 Sum_probs=157.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|+++ |++|++++|+.......++..... ......++++.+|+.+. ..+...+
T Consensus 17 ~~l~~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~d~~~~------~~~~~~~ 74 (307)
T d1qyca_ 17 RHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLE--------------SFKASGANIVHGSIDDH------ASLVEAV 74 (307)
T ss_dssp HHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHH--------------HHHTTTCEEECCCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCeEEEEECCCccccchhHHHHHH--------------hhccCCcEEEEeecccc------hhhhhhh
Confidence 4789999998 999999999876554443332210 11235789999999876 5777888
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
++++.|+|+++.. +..++.++++++... +++++++.||........+. ..+.
T Consensus 75 ~~~~~vi~~~~~~------------~~~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~~~-----~~~~---------- 126 (307)
T d1qyca_ 75 KNVDVVISTVGSL------------QIESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNVHA-----VEPA---------- 126 (307)
T ss_dssp HTCSEEEECCCGG------------GSGGGHHHHHHHHHH-CCCSEEECSCCSSCTTSCCC-----CTTH----------
T ss_pred hhceeeeeccccc------------ccchhhHHHHHHHHh-ccccceeeeccccccccccc-----cccc----------
Confidence 8999999999763 344556778888885 78889988886543321110 0000
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
..|...+...+..+... +++++++||+++||........+ +.....+.
T Consensus 127 -------------------~~~~~~~~~~~~~~~~~---~~~~~i~r~~~v~g~~~~~~~~~----------~~~~~~~~ 174 (307)
T d1qyca_ 127 -------------------KSVFEVKAKVRRAIEAE---GIPYTYVSSNCFAGYFLRSLAQA----------GLTAPPRD 174 (307)
T ss_dssp -------------------HHHHHHHHHHHHHHHHH---TCCBEEEECCEEHHHHTTTTTCT----------TCSSCCSS
T ss_pred -------------------cccccccccccchhhcc---CCCceecccceecCCCccchhhh----------hhhhhhcc
Confidence 44556666666666554 88999999999999754432211 11122334
Q ss_pred eeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 241 IRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 241 ~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
....++.+++.++|+|++|+|++++.+++++... ....||++++ +.+|+.|+++.+.+..|.+.
T Consensus 175 ~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~---~~~~~~~~~~--~~~s~~ei~~~~~~~~G~~~ 238 (307)
T d1qyca_ 175 KVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTL---NKTLYLRLPA--NTLSLNELVALWEKKIDKTL 238 (307)
T ss_dssp EEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGT---TEEEECCCGG--GEEEHHHHHHHHHHHTTSCC
T ss_pred cceeeecccccccCCcHHHHHHHHHHHhcChhhc---CceeEEeCCC--CccCHHHHHHHHHHHHCCCC
Confidence 4567788999999999999999999999887652 2345677777 78999999999999997653
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.76 E-value=3.9e-17 Score=141.14 Aligned_cols=192 Identities=19% Similarity=0.142 Sum_probs=136.6
Q ss_pred eccCCCCCCCCCHHHHHHHhc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccc
Q psy7539 61 NGDVAVPDLGISAEDRQMLSE--TIHIVYHIAATVRFD---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCH 135 (318)
Q Consensus 61 ~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~ 135 (318)
.+|+++. +.+..+++ ++|+|||+||..... ..+...+..|+.++.+|+++|.+. + .+++++||..++
T Consensus 37 ~~Dl~~~------~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~ 108 (298)
T d1n2sa_ 37 CGDFSNP------KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVF 108 (298)
T ss_dssp CCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGS
T ss_pred cCcCCCH------HHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-c-cccccccccccc
Confidence 5788765 57777776 679999999976432 345578899999999999999974 4 578888887776
Q ss_pred cCCc--ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEeccccccc
Q psy7539 136 PKEK--VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIP 213 (318)
Q Consensus 136 ~~~~--~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G 213 (318)
.... +.+|.....|. +.|+.+|.++|.++..+.. ...++|++..++
T Consensus 109 ~~~~~~~~~E~~~~~p~-----------------------------~~y~~~k~~~e~~~~~~~~---~~~~~~~~~~~~ 156 (298)
T d1n2sa_ 109 PGTGDIPWQETDATSPL-----------------------------NVYGKTKLAGEKALQDNCP---KHLIFRTSWVYA 156 (298)
T ss_dssp CCCTTCCBCTTSCCCCS-----------------------------SHHHHHHHHHHHHHHHHCS---SEEEEEECSEEC
T ss_pred cCCCCCCCccccccCCC-----------------------------chHhhhhhhhhhhHHhhhc---ccccccccceee
Confidence 5533 67787766665 8999999999999987743 556677666654
Q ss_pred ccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCcee
Q psy7539 214 IWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQIT 293 (318)
Q Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~ 293 (318)
... ......+...+..+.. +...+.+..+++|++|+++++..++...... ....++||++++ ..++
T Consensus 157 ~~~---------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~-~~~~~~~n~~~~--~~~~ 222 (298)
T d1n2sa_ 157 GKG---------NNFAKTMLRLAKERQT--LSVINDQYGAPTGAELLADCTAHAIRVALNK-PEVAGLYHLVAG--GTTT 222 (298)
T ss_dssp SSS---------CCHHHHHHHHHHHCSE--EEEECSCEECCEEHHHHHHHHHHHHHHHHHC-GGGCEEEECCCB--SCEE
T ss_pred ccC---------Cccchhhhhhhcccce--eecccceeecccccchHHHHHHHHHhhhhcc-ccccccccccCC--Ccee
Confidence 221 1112223333333322 2334567889999999999998887642211 012689999998 8999
Q ss_pred HHHHHHHHHHhhc
Q psy7539 294 WYDIIENGKDIAR 306 (318)
Q Consensus 294 ~~el~~~i~~~~~ 306 (318)
+.++++.+.+..+
T Consensus 223 ~~~~~~~i~~~~~ 235 (298)
T d1n2sa_ 223 WHDYAALVFDEAR 235 (298)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHhhhh
Confidence 9999999987663
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.75 E-value=4.3e-18 Score=142.71 Aligned_cols=216 Identities=12% Similarity=0.040 Sum_probs=146.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|++.|++++..+.|+++.|+.+.. .....+++++.+|+.+. +.+.+++
T Consensus 17 ~~l~~~Ll~~g~~v~v~~~~R~~~~~------------------------~~~~~~~~~~~~d~~~~------~~~~~~~ 66 (252)
T d2q46a1 17 QIVYKKLKEGSDKFVAKGLVRSAQGK------------------------EKIGGEADVFIGDITDA------DSINPAF 66 (252)
T ss_dssp HHHHHHHHHTTTTCEEEEEESCHHHH------------------------HHTTCCTTEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHCCCcEEEEEEcCCHHHH------------------------HhccCCcEEEEeeeccc------ccccccc
Confidence 47899999983335788888853211 22345788999999887 6888899
Q ss_pred cCccEEEEcccccCcc----------------hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccc
Q psy7539 81 ETIHIVYHIAATVRFD----------------DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~----------------~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+++|+|||+|+..... ........+|+.|+.++++.+... ..+.+.+.|+........+...
T Consensus 67 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~- 144 (252)
T d2q46a1 67 QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPDHPLNK- 144 (252)
T ss_dssp TTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTTCGGGG-
T ss_pred ccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-cccccccccccccCCCCccccc-
Confidence 9999999999864211 112246788999999999999985 7888899888665432111000
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCccc
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTD 224 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~ 224 (318)
.....|...+.+.+.+... .+++++++||+.+||+.......
T Consensus 145 --------------------------------~~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~--- 186 (252)
T d2q46a1 145 --------------------------------LGNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVREL--- 186 (252)
T ss_dssp --------------------------------GGGCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCE---
T ss_pred --------------------------------ccccchhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhh---
Confidence 0015666666666655444 48999999999999975432210
Q ss_pred CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCC-CCceeHHHHHHHHHH
Q psy7539 225 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANK-DFQITWYDIIENGKD 303 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~-~~~~~~~el~~~i~~ 303 (318)
+.+ ..........+++|++|+|++++.+++++.. .+++||++++. ....+++++.+++.+
T Consensus 187 -~~~--------------~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~----~g~~~~i~~~~~~~~~~~~~~~~lf~~ 247 (252)
T d2q46a1 187 -LVG--------------KDDELLQTDTKTVPRADVAEVCIQALLFEEA----KNKAFDLGSKPEGTSTPTKDFKALFSQ 247 (252)
T ss_dssp -EEE--------------STTGGGGSSCCEEEHHHHHHHHHHHTTCGGG----TTEEEEEEECCTTTSCCCCCHHHHHTT
T ss_pred -hhc--------------cCcccccCCCCeEEHHHHHHHHHHHhCCccc----cCcEEEEeeCCCCCChhHHHHHHHHHH
Confidence 000 0001224556899999999999999998776 37899998741 134567777776655
Q ss_pred hh
Q psy7539 304 IA 305 (318)
Q Consensus 304 ~~ 305 (318)
..
T Consensus 248 i~ 249 (252)
T d2q46a1 248 VT 249 (252)
T ss_dssp CC
T ss_pred HH
Confidence 43
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.73 E-value=4.6e-18 Score=140.50 Aligned_cols=176 Identities=15% Similarity=0.037 Sum_probs=121.1
Q ss_pred ChhHHHHHhhCCCc--EEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHH
Q psy7539 1 KVLLEKILRTCENV--KIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQM 78 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~--~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~ 78 (318)
++|+++|+++ ++ +|++++|++... .+++.....|+.+ ....
T Consensus 16 ~~lv~~L~~~--~~~~~v~~~~r~~~~~---------------------------~~~~~~~~~d~~~--------~~~~ 58 (212)
T d2a35a1 16 EHLLDRILSE--PTLAKVIAPARKALAE---------------------------HPRLDNPVGPLAE--------LLPQ 58 (212)
T ss_dssp HHHHHHHHHC--TTCCEEECCBSSCCCC---------------------------CTTEECCBSCHHH--------HGGG
T ss_pred HHHHHHHHhC--CCeEEEEEEeCCchhh---------------------------cccccccccchhh--------hhhc
Confidence 4799999998 54 899998864322 1344444455431 2233
Q ss_pred HhcCccEEEEcccccC-cchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHH
Q psy7539 79 LSETIHIVYHIAATVR-FDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 79 ~~~~~d~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~ 157 (318)
+...+|.|||++|... .......+.+.|+.++.+++++|++. ++++|+++||.++++...
T Consensus 59 ~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~~~------------------ 119 (212)
T d2a35a1 59 LDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAKSS------------------ 119 (212)
T ss_dssp CCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTCS------------------
T ss_pred cccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-cccccccccccccccccc------------------
Confidence 3347899999998753 22334578999999999999999995 999999999987754311
Q ss_pred HHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCC-cEEEecccccccccCCCCCCcccCCCchHHHHHHH
Q psy7539 158 KAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGM-PCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGA 236 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~ 236 (318)
+.|+.+|+.+|+.+.+. ++ +++|+||+++||+....... . .
T Consensus 120 ----------------------~~y~~~K~~~E~~l~~~---~~~~~~I~Rp~~v~G~~~~~~~~---------~----~ 161 (212)
T d2a35a1 120 ----------------------IFYNRVKGELEQALQEQ---GWPQLTIARPSLLFGPREEFRLA---------E----I 161 (212)
T ss_dssp ----------------------SHHHHHHHHHHHHHTTS---CCSEEEEEECCSEESTTSCEEGG---------G----G
T ss_pred ----------------------cchhHHHHHHhhhcccc---ccccceeeCCcceeCCcccccHH---------H----H
Confidence 88999999999988754 55 59999999999965432110 0 0
Q ss_pred hcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 237 GKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
....... .....+..||++|+|++++.++.++..
T Consensus 162 ~~~~~~~---~~~~~~~~i~v~DvA~ai~~~~~~~~~ 195 (212)
T d2a35a1 162 LAAPIAR---ILPGKYHGIEACDLARALWRLALEEGK 195 (212)
T ss_dssp TTCCCC-------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHhh---ccCCCCcEEEHHHHHHHHHHHHcCCCC
Confidence 0111111 112334569999999999999987653
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.64 E-value=3.2e-15 Score=132.50 Aligned_cols=220 Identities=12% Similarity=-0.007 Sum_probs=151.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++|+++|+++ |++|++++|+.++.... . ....++++++.||+.++. +.+..++
T Consensus 17 ~~lv~~Ll~~--G~~V~~l~R~~~~~~~~-~-------------------~~~~~~v~~~~gD~~d~~-----~~~~~a~ 69 (350)
T d1xgka_ 17 ASLIRVAAAV--GHHVRAQVHSLKGLIAE-E-------------------LQAIPNVTLFQGPLLNNV-----PLMDTLF 69 (350)
T ss_dssp HHHHHHHHHT--TCCEEEEESCSCSHHHH-H-------------------HHTSTTEEEEESCCTTCH-----HHHHHHH
T ss_pred HHHHHHHHhC--CCeEEEEECCcchhhhh-h-------------------hcccCCCEEEEeeCCCcH-----HHHHHHh
Confidence 4799999998 99999999976543211 0 112357999999998862 4577788
Q ss_pred cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHh
Q psy7539 81 ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAE 160 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~ 160 (318)
+++|.+++...... ..|+..+.+++++|.+. +++++++.||........ ..+
T Consensus 70 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~-------~~~----------- 121 (350)
T d1xgka_ 70 EGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYG-------PWP----------- 121 (350)
T ss_dssp TTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTS-------SCC-----------
T ss_pred cCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEEEeeccccccCC-------ccc-----------
Confidence 89999988764321 23567788999999996 888888888865432211 111
Q ss_pred hhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCc
Q psy7539 161 LLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGI 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (318)
...|..+|...|.++.+. +++++++|++..++....+....... . ....+.
T Consensus 122 ------------------~~~~~~~k~~~~~~~~~~---~~~~~~vr~~~~~~~~~~~~~~~~~~--~------~~~~~~ 172 (350)
T d1xgka_ 122 ------------------AVPMWAPKFTVENYVRQL---GLPSTFVYAGIYNNNFTSLPYPLFQM--E------LMPDGT 172 (350)
T ss_dssp ------------------CCTTTHHHHHHHHHHHTS---SSCEEEEEECEEGGGCBSSSCSSCBE--E------ECTTSC
T ss_pred ------------------chhhhhhHHHHHHHHHhh---ccCceeeeeceeeccccccccccccc--c------cccccc
Confidence 167888999988887765 68999999998887543322110000 0 001111
Q ss_pred -eeeEecCCCcccCcchH-HHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHHHHHHHHhhcccC
Q psy7539 241 -IRTMYCDYSTCADFLPV-DVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDIIENGKDIARNKV 309 (318)
Q Consensus 241 -~~~~~~~~~~~~~~v~v-~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el~~~i~~~~~~~~ 309 (318)
....+.+++..++++++ +|+++++..++...... ..++.|+++++ .+|+.|+++.+.+.+|.+.
T Consensus 173 ~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~--~~G~~~~~~g~---~~T~~eia~~l~~~~G~~v 238 (350)
T d1xgka_ 173 FEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK--WNGHRIALTFE---TLSPVQVCAAFSRALNRRV 238 (350)
T ss_dssp EEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH--HTTCEEEECSE---EECHHHHHHHHHHHHTSCE
T ss_pred ceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhh--cCCeEEEEeCC---cCCHHHHHHHHHHHHCCcc
Confidence 12345577888888886 79999999998653210 12789999876 6999999999999998653
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.38 E-value=2.3e-11 Score=102.29 Aligned_cols=212 Identities=11% Similarity=-0.042 Sum_probs=137.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+. +++++.. .+...++.++.+|++++ +++++++
T Consensus 19 ~aia~~la~~--Ga~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 70 (254)
T d1hdca_ 19 AEAARQAVAA--GARVVLADVLD------EEGAATA--------------RELGDAARYQHLDVTIE------EDWQRVV 70 (254)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HTTGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHH--------------HHhCCceEEEEcccCCH------HHHHHHH
Confidence 3678999998 99999999853 2333322 22345788999999986 5666654
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++|++||..+....
T Consensus 71 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~----- 145 (254)
T d1hdca_ 71 AYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL----- 145 (254)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----
T ss_pred HHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc-----
Confidence 3 68999999997522 2446678999999999888876532 245699999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+
T Consensus 146 -----~----------------------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~----- 187 (254)
T d1hdca_ 146 -----A----------------------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP----- 187 (254)
T ss_dssp -----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH-----
T ss_pred -----c----------------------------chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc-----
Confidence 0 017899999999988887765 6899999999977321
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHHHH
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWYDI 297 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~el 297 (318)
+...................+-....+|+|.+++.++...... ..+.++.+.++-+...+++++
T Consensus 188 ------------~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~--itG~~i~vDGG~t~gp~~~~~ 251 (254)
T d1hdca_ 188 ------------MTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSY--VTGAELAVDGGWTTGPTVKYV 251 (254)
T ss_dssp ------------HHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTT--CCSCEEEESTTTTTSCCHHHH
T ss_pred ------------cchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCC--CCCceEEeCCCccCCCCcccc
Confidence 1111111000000001111122234799999999888654421 248899998873333344443
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.34 E-value=6e-11 Score=99.03 Aligned_cols=196 Identities=13% Similarity=0.058 Sum_probs=133.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++ +++++.. .+...+..++.+|++++ +++++++
T Consensus 20 ~aia~~la~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 71 (244)
T d1nffa_ 20 ASHVRAMVAE--GAKVVFGDILD------EEGKAMA--------------AELADAARYVHLDVTQP------AQWKAAV 71 (244)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HHTGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHH--------------HHhhCcceEEEeecCCH------HHHHHHH
Confidence 3678899998 99999999953 2333221 22345788999999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++|++||..+....
T Consensus 72 ~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----- 146 (244)
T d1nffa_ 72 DTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT----- 146 (244)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----
T ss_pred HHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc-----
Confidence 3 68999999997532 2446779999999998888765432 234589999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.+|...+.+.+..+. +|+++..+-||.+-.+.....
T Consensus 147 -----~----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 193 (244)
T d1nffa_ 147 -----V----------------------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV 193 (244)
T ss_dssp -----T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS
T ss_pred -----c----------------------------cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh
Confidence 0 016899999999998887765 689999999997744221110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+ . ..... ...-+...+|+|.++..++...... ..++++.+.++
T Consensus 194 ~----~--------------~~~~~-----pl~R~~~p~diA~~v~fL~s~~s~~--itG~~i~vDGG 236 (244)
T d1nffa_ 194 P----E--------------DIFQT-----ALGRAAEPVEVSNLVVYLASDESSY--STGAEFVVDGG 236 (244)
T ss_dssp C----T--------------TCSCC-----SSSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred h----H--------------HHHhc-----cccCCCCHHHHHHHHHHHhChhhCC--CcCCEEEECCC
Confidence 0 0 00000 1113678899999999888654321 24888998877
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.31 E-value=4.5e-11 Score=100.14 Aligned_cols=204 Identities=12% Similarity=0.052 Sum_probs=130.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++.|+++ |++|++..|++.. ..++.. .....++.++.+|++++ ++++.++
T Consensus 19 ~aia~~la~~--Ga~V~~~~~~~~~-----~~~~~~--------------~~~g~~~~~~~~Dvs~~------~~v~~~~ 71 (247)
T d2ew8a1 19 RAIAERFAVE--GADIAIADLVPAP-----EAEAAI--------------RNLGRRVLTVKCDVSQP------GDVEAFG 71 (247)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCCH-----HHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCchH-----HHHHHH--------------HHcCCcEEEEEeeCCCH------HHHHHHH
Confidence 3678999998 9999999986431 111111 22345788999999987 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++|++||..+....
T Consensus 72 ~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~----- 146 (247)
T d2ew8a1 72 KQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI----- 146 (247)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC-----
Confidence 3 78999999998522 2456679999999998888876532 234589999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+....
T Consensus 147 -----~----------------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~- 192 (247)
T d2ew8a1 147 -----E----------------------------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA- 192 (247)
T ss_dssp -----S----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------
T ss_pred -----c----------------------------ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccc-
Confidence 1 016899999999988877664 68999999999774322110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .... ...........-+...+|+|.+++.++...... ..+.++.+.++
T Consensus 193 ------~~~-~~~~--------~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~--itG~~i~vDGG 243 (247)
T d2ew8a1 193 ------SAL-SAMF--------DVLPNMLQAIPRLQVPLDLTGAAAFLASDDASF--ITGQTLAVDGG 243 (247)
T ss_dssp --------------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTT--CCSCEEEESSS
T ss_pred ------ccc-chhH--------HHHHHHhccCCCCCCHHHHHHHHHHHhCchhcC--CcCCeEEECCC
Confidence 000 0000 000000011112556799999999888654431 24788888776
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.31 E-value=3.3e-11 Score=101.79 Aligned_cols=213 Identities=10% Similarity=0.011 Sum_probs=132.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++. +..+.+.+.+. .....++.++.+|++++ ++++.++
T Consensus 18 ~aiA~~la~~--Ga~V~~~~r~~~--~~~~~~~~~~~-------------~~~g~~~~~~~~Dv~~~------~~v~~~~ 74 (260)
T d1x1ta1 18 LGIATALAAQ--GADIVLNGFGDA--AEIEKVRAGLA-------------AQHGVKVLYDGADLSKG------EAVRGLV 74 (260)
T ss_dssp HHHHHHHHHT--TCEEEEECCSCH--HHHHHHHHHHH-------------HHHTSCEEEECCCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCcH--HHHHHHHHHHH-------------HhcCCcEEEEECCCCCH------HHHHHHH
Confidence 3678899998 999999999532 12222222111 22345788999999986 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++... .+--++|++||..+....
T Consensus 75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~----- 149 (260)
T d1x1ta1 75 DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS----- 149 (260)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----
T ss_pred HHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceecc-----
Confidence 3 68999999997421 2446679999999988877766432 234589999998764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||...+.+.+..+. +|+.+..+.||.+-.+.....
T Consensus 150 -----~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 196 (260)
T d1x1ta1 150 -----A----------------------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ 196 (260)
T ss_dssp -----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred -----C----------------------------CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhh
Confidence 1 016899999999988877755 689999999997743211100
Q ss_pred CCcccCCCch-----HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGP-----TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. ...... ......... ......-+...+|+|.+++.++...... ..+.++++.++
T Consensus 197 ~---~~~~~~~~~~~~~~~~~~~~--------~~~Pl~R~g~pediA~~v~fL~S~~a~~--itG~~i~vDGG 256 (260)
T d1x1ta1 197 I---SALAEKNGVDQETAARELLS--------EKQPSLQFVTPEQLGGTAVFLASDAAAQ--ITGTTVSVDGG 256 (260)
T ss_dssp ---------------------CHH--------HHCTTCCCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred h---hhhhhhcCCChHHHHHHHHH--------hcCCCCCCcCHHHHHHHHHHHhChhhCC--CcCCEEEECcc
Confidence 0 000000 000000000 0001113567899999999888654431 24788888876
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.30 E-value=3.6e-11 Score=100.04 Aligned_cols=193 Identities=10% Similarity=0.060 Sum_probs=128.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++... .++..+.+|++++ +++++++
T Consensus 21 ~aia~~la~~--Ga~V~~~~r~~~~~----------------------------~~~~~~~~Dv~~~------~~v~~~~ 64 (237)
T d1uzma1 21 LAIAQRLAAD--GHKVAVTHRGSGAP----------------------------KGLFGVEVDVTDS------DAVDRAF 64 (237)
T ss_dssp HHHHHHHHHT--TCEEEEEESSSCCC----------------------------TTSEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCcchh----------------------------cCceEEEEecCCH------HHHHHHH
Confidence 3678999998 99999999975432 3567889999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... .+.++..+++|+.++..+.+++... .+-.++|++||..+....
T Consensus 65 ~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~----- 139 (237)
T d1uzma1 65 TAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI----- 139 (237)
T ss_dssp HHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------
T ss_pred HHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC-----
Confidence 3 68999999997421 2456678999999988877655422 345689999997664321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+..+...
T Consensus 140 -----~----------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~-- 184 (237)
T d1uzma1 140 -----G----------------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-- 184 (237)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--
T ss_pred -----c----------------------------ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhh--
Confidence 0 117899999999988877654 6899999999977432110
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+ +......... . .| ..-+...+|+|.++..++...... ..++++.+.++
T Consensus 185 -----~~--~~~~~~~~~~-~---~p-----l~R~~~pedvA~~v~fL~S~~s~~--itG~~i~vdGG 234 (237)
T d1uzma1 185 -----AL--DERIQQGALQ-F---IP-----AKRVGTPAEVAGVVSFLASEDASY--ISGAVIPVDGG 234 (237)
T ss_dssp -----HS--CHHHHHHHGG-G---CT-----TCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----cc--CHHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHhCchhcC--CcCCeEEECCC
Confidence 00 0111111111 1 11 113567899999999888654431 24788888776
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.28 E-value=9.2e-11 Score=98.21 Aligned_cols=204 Identities=11% Similarity=-0.014 Sum_probs=129.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++. ..+..++ .+..++.+|++++ +++++++
T Consensus 19 ~aia~~la~~--G~~V~~~~~~~~---~~~~~~~--------------------~~~~~~~~Dv~~~------~~v~~~~ 67 (248)
T d2d1ya1 19 RAIAQAFARE--GALVALCDLRPE---GKEVAEA--------------------IGGAFFQVDLEDE------RERVRFV 67 (248)
T ss_dssp HHHHHHHHHT--TCEEEEEESSTT---HHHHHHH--------------------HTCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHH--------------------cCCeEEEEeCCCH------HHHHHHH
Confidence 3678999998 999999999643 2222111 1346789999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... .+.++..+++|+.|+.++.+++... .+-.++|++||..+....
T Consensus 68 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~----- 142 (248)
T d2d1ya1 68 EEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE----- 142 (248)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----
T ss_pred HHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc-----
Confidence 3 78999999997522 2346678999999999988887542 234589999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||...+.+.+..+. +|+++..+.||.+-.+.....
T Consensus 143 -----~----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~ 189 (248)
T d2d1ya1 143 -----Q----------------------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEA 189 (248)
T ss_dssp -----T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred -----c----------------------------ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHH
Confidence 0 017899999999988877655 689999999996632100000
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+ .....+......+.. .....-+...+|+|.++..++...... ..++++.+.++
T Consensus 190 --~-~~~~~~~~~~~~~~~---------~~pl~R~~~pedia~~v~fL~S~~s~~--itG~~i~vDGG 243 (248)
T d2d1ya1 190 --I-ALSPDPERTRRDWED---------LHALRRLGKPEEVAEAVLFLASEKASF--ITGAILPVDGG 243 (248)
T ss_dssp --H-C--------CHHHHT---------TSTTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred --h-hcCCCHHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCchhcC--CCCcEEEcCcC
Confidence 0 000000001111111 111123567899999999888654431 25889999877
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.28 E-value=7.6e-11 Score=98.42 Aligned_cols=201 Identities=11% Similarity=0.055 Sum_probs=133.6
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++ +++++.. .+...+..++.+|++++ ++++.++
T Consensus 18 ~a~a~~l~~~--G~~Vv~~~r~~------~~l~~~~--------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 69 (243)
T d1q7ba_ 18 RAIAETLAAR--GAKVIGTATSE------NGAQAIS--------------DYLGANGKGLMLNVTDP------ASIESVL 69 (243)
T ss_dssp HHHHHHHHHT--TCEEEEEESSH------HHHHHHH--------------HHHGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHc--CCEEEEEeCCH------HHHHHHH--------------HHhCCCCcEEEEEecCH------HHhhhhh
Confidence 3688999998 99999999852 2233221 12234778899999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++|++||..+....
T Consensus 70 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~----- 144 (243)
T d1q7ba_ 70 EKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN----- 144 (243)
T ss_dssp HHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----
T ss_pred hhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC-----
Confidence 3 68999999997422 2446678999999999888877532 234589999997654221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+..
T Consensus 145 -----~----------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~--- 188 (243)
T d1q7ba_ 145 -----G----------------------------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT--- 188 (243)
T ss_dssp -----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---
T ss_pred -----C----------------------------CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhh---
Confidence 0 017899999999998887765 689999999997733211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ......+... .| ..-+...+|+|.++..++...... ..++++++.++
T Consensus 189 ----~~~~--~~~~~~~~~~----~p-----l~R~~~pedvA~~v~fL~S~~s~~--itGq~i~vdGG 239 (243)
T d1q7ba_ 189 ----RALS--DDQRAGILAQ----VP-----AGRLGGAQEIANAVAFLASDEAAY--ITGETLHVNGG 239 (243)
T ss_dssp ----HTSC--HHHHHHHHTT----CT-----TSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ----hhhh--hhHHHHHHhc----CC-----CCCCCCHHHHHHHHHHHhCchhcC--CcCCeEEECCC
Confidence 1111 1111122211 01 123567899999999888654431 24888988876
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=1.6e-10 Score=97.20 Aligned_cols=204 Identities=9% Similarity=0.012 Sum_probs=133.8
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|++..|+.. ..+.+.+.+ .....++.++.+|++++ ++++.+++
T Consensus 26 aia~~la~~--Ga~V~~~~r~~~---~~~~~~~~l--------------~~~g~~~~~~~~Dvs~~------~~~~~~~~ 80 (255)
T d1fmca_ 26 EIAITFATA--GASVVVSDINAD---AANHVVDEI--------------QQLGGQAFACRCDITSE------QELSALAD 80 (255)
T ss_dssp HHHHHHHTT--TCEEEEEESCHH---HHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCHH---HHHHHHHHH--------------HHcCCcEEEEEccCCCH------HHHHHHHH
Confidence 678899988 999999998522 112222111 22345788999999986 46655443
Q ss_pred -------CccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccccc
Q psy7539 82 -------TIHIVYHIAATVRF------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
++|++||+||.... ...++..+++|+.|+..+.+++... .+-.++|++||..+....
T Consensus 81 ~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~------- 153 (255)
T d1fmca_ 81 FAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN------- 153 (255)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-------
T ss_pred HHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc-------
Confidence 78999999997421 2346678999999988888766432 234578999997664321
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCC
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+...
T Consensus 154 ---~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~---- 198 (255)
T d1fmca_ 154 ---I----------------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK---- 198 (255)
T ss_dssp ---T----------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH----
T ss_pred ---c----------------------------ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhh----
Confidence 0 017899999999998887765 6899999999977432110
Q ss_pred cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 222 WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....+ .....+.... | ..-+...+|+|.++..++...... ..++++.+.++
T Consensus 199 ---~~~~~-e~~~~~~~~~----p-----l~R~g~pedvA~~v~fL~S~~s~~--itG~~i~vDGG 249 (255)
T d1fmca_ 199 ---SVITP-EIEQKMLQHT----P-----IRRLGQPQDIANAALFLCSPAASW--VSGQILTVSGG 249 (255)
T ss_dssp ---TTCCH-HHHHHHHHTC----S-----SCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ---ccCCH-HHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCchhcC--CcCCEEEECcC
Confidence 11121 2222222211 1 112567799999999988654421 24889999887
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.26 E-value=1.3e-10 Score=97.98 Aligned_cols=206 Identities=12% Similarity=-0.005 Sum_probs=132.6
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|++..|+.. +..+.+.+.+ .....++.++.+|++++ ++++.+++
T Consensus 22 aia~~la~~--G~~Vv~~~r~~~--~~~~~~~~~~--------------~~~g~~~~~~~~Dvt~~------~~v~~~~~ 77 (261)
T d1geea_ 22 SMAIRFATE--KAKVVVNYRSKE--DEANSVLEEI--------------KKVGGEAIAVKGDVTVE------SDVINLVQ 77 (261)
T ss_dssp HHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHH--------------HHTTCEEEEEECCTTSH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEeCCcH--HHHHHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHHH
Confidence 678999998 999999999532 1222222111 22235788999999986 56665543
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CC-CccEEEEeccccccCCccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IH-LQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-~~~~v~~SS~~~~~~~~~~~E 143 (318)
++|++||+||.... .+.++..+++|+.|+..+.+++... .+ -..+|++||.+.....
T Consensus 78 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~----- 152 (261)
T d1geea_ 78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW----- 152 (261)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----
T ss_pred HHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC-----
Confidence 78999999997522 2345678999999988887766432 23 3458899997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.|-.+..
T Consensus 153 -----~----------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~--- 196 (261)
T d1geea_ 153 -----P----------------------------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN--- 196 (261)
T ss_dssp -----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG---
T ss_pred -----c----------------------------cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhH---
Confidence 1 016899999999988877655 689999999997733210
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
............+... . | ..-+...+|+|.++..++...... ..++++.+.++
T Consensus 197 ----~~~~~~~~~~~~~~~~-~---p-----l~R~~~pediA~~v~fL~S~~s~~--itG~~i~vDGG 249 (261)
T d1geea_ 197 ----AEKFADPEQRADVESM-I---P-----MGYIGEPEEIAAVAAWLASSEASY--VTGITLFADGG 249 (261)
T ss_dssp ----HHHHHSHHHHHHHHTT-C---T-----TSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ----hhhcCCHHHHHHHHhc-C---C-----CCCCCCHHHHHHHHHHHhCchhcC--CcCCeEEECCC
Confidence 0000011111222211 0 1 112567899999999888654421 24889999887
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=4.5e-10 Score=93.73 Aligned_cols=202 Identities=12% Similarity=0.090 Sum_probs=135.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++ +++.+.. ....+++.+.+|++++ +.+++++
T Consensus 21 ~aia~~la~~--G~~V~~~~r~~------~~l~~~~---------------~~~~~~~~~~~Dv~d~------~~v~~~~ 71 (244)
T d1pr9a_ 21 RGTVQALHAT--GARVVAVSRTQ------ADLDSLV---------------RECPGIEPVCVDLGDW------EATERAL 71 (244)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH---------------HHSTTCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHc--CCEEEEEECCH------HHHHHHH---------------HhcCCCeEEEEeCCCH------HHHHHHH
Confidence 3678999998 99999999852 2333321 1124678899999986 5777776
Q ss_pred c---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh-c---CCCccEEEEeccccccCCcccccccC
Q psy7539 81 E---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ-M---IHLQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 81 ~---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
+ ++|++||+||.... .+.++..+++|+.++..+.+++.. + .+..++|++||.++....
T Consensus 72 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~-------- 143 (244)
T d1pr9a_ 72 GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-------- 143 (244)
T ss_dssp TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------
T ss_pred HHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc--------
Confidence 5 68999999997522 244567899999998888876643 1 234689999997764321
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCc
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+...
T Consensus 144 --~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~----- 188 (244)
T d1pr9a_ 144 --T----------------------------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ----- 188 (244)
T ss_dssp --T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHH-----
T ss_pred --c----------------------------chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHh-----
Confidence 0 016899999999998887764 6899999999977543211
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
................ | ..-+...+|+|.++..++...... ..+.++.+.++
T Consensus 189 --~~~~~~~~~~~~~~~~----p-----l~R~~~peevA~~v~fL~S~~a~~--itG~~i~vDGG 240 (244)
T d1pr9a_ 189 --ATWSDPHKAKTMLNRI----P-----LGKFAEVEHVVNAILFLLSDRSGM--TTGSTLPVEGG 240 (244)
T ss_dssp --TTSCSHHHHHHHHTTC----T-----TCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred --hhccChHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCchhCC--cCCcEEEECcc
Confidence 1111112222222210 1 113677899999999888654431 24788888776
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.25 E-value=5.8e-11 Score=99.92 Aligned_cols=213 Identities=10% Similarity=0.019 Sum_probs=131.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++. ..+.+.+.+ .....++.++.+|++++ ++++.++
T Consensus 15 ~aia~~la~~--Ga~V~~~~r~~~---~l~~~~~~i--------------~~~g~~~~~~~~Dv~~~------~~v~~~~ 69 (255)
T d1gega_ 15 KAIALRLVKD--GFAVAIADYNDA---TAKAVASEI--------------NQAGGHAVAVKVDVSDR------DQVFAAV 69 (255)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHH--------------HHTTCCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHH--------------HhcCCcEEEEEeeCCCH------HHHHHHH
Confidence 3678999998 999999999532 112222111 22235788999999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh----cCCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ----MIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++.. .+.-.++|++||..+....
T Consensus 70 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---- 145 (255)
T d1gega_ 70 EQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN---- 145 (255)
T ss_dssp HHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----
T ss_pred HHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC----
Confidence 3 68999999997421 244667999999999998877643 1234578999997664221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+....
T Consensus 146 ------~----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~ 191 (255)
T d1gega_ 146 ------P----------------------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE 191 (255)
T ss_dssp ------T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH
T ss_pred ------c----------------------------ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhh
Confidence 1 017899999999988877654 68999999999762210000
Q ss_pred CCCc-ccCC-CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGW-TDNI-NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... .+.. .........+.+. ....-+...+|+|.++..++...... ..+.++.+.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~---------~pl~R~~~peevA~~v~fL~S~~a~~--itG~~i~vDGG 251 (255)
T d1gega_ 192 IDRQVSEAAGKPLGYGTAEFAKR---------ITLGRLSEPEDVAACVSYLASPDSDY--MTGQSLLIDGG 251 (255)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESSS
T ss_pred hhhhhHhhhcccchhHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchhCC--ccCcEEEecCC
Confidence 0000 0000 0000011111111 01112567899999999888654431 24788888877
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.25 E-value=4.2e-11 Score=100.96 Aligned_cols=213 Identities=10% Similarity=0.055 Sum_probs=134.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++ +++++..+ .+ .....++.++.+|++++ ++++.++
T Consensus 16 ~aia~~la~~--Ga~V~i~~r~~------~~l~~~~~-----~l------~~~g~~~~~~~~Dvs~~------~~v~~~~ 70 (257)
T d2rhca1 16 LEIARRLGKE--GLRVFVCARGE------EGLRTTLK-----EL------REAGVEADGRTCDVRSV------PEIEALV 70 (257)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHHH-----HH------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHHH-----HH------HhcCCcEEEEEeecCCH------HHHHHHH
Confidence 3678999988 99999999952 22222211 11 22235788999999987 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-----CCCccEEEEeccccccCCccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-----IHLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~~~~~v~~SS~~~~~~~~~~ 141 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++... .+..++|++||..+....
T Consensus 71 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~--- 147 (257)
T d2rhca1 71 AAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV--- 147 (257)
T ss_dssp HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC---
T ss_pred HHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc---
Confidence 3 68999999997422 2346679999999999999988642 133478999997664321
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
| ....|+.||...+.+.+..+. +|+++..+.||.+-.+...
T Consensus 148 -------~----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~ 192 (257)
T d2rhca1 148 -------V----------------------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA 192 (257)
T ss_dssp -------T----------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHH
T ss_pred -------c----------------------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHH
Confidence 1 016899999999998887765 5789999999976321100
Q ss_pred CCC-Cccc-CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLP-GWTD-NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
... .+.+ .-..+......+.... ...-+...+|+|.+++.++...... ..++++.+.++
T Consensus 193 ~~~~~~~~~~~~~~~e~~~~~~~~~---------PlgR~~~pedia~~v~fL~S~~s~~--itG~~i~vDGG 253 (257)
T d2rhca1 193 SVREHYSDIWEVSTEEAFDRITARV---------PIGRYVQPSEVAEMVAYLIGPGAAA--VTAQALNVCGG 253 (257)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred HHHhhhhhhcccChHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCchhcC--CcCceEEECcC
Confidence 000 0000 0000111222222210 0112677899999999988654431 24788888776
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.25 E-value=1.7e-10 Score=96.83 Aligned_cols=203 Identities=12% Similarity=0.068 Sum_probs=133.8
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|++..|+.. ..+.+.+.+ .....++.++.+|++++ +++..+++
T Consensus 25 a~a~~la~~--Ga~V~~~~r~~~---~l~~~~~~l--------------~~~g~~~~~~~~Dvt~~------~~v~~~~~ 79 (251)
T d2c07a1 25 EIAKMLAKS--VSHVICISRTQK---SCDSVVDEI--------------KSFGYESSGYAGDVSKK------EEISEVIN 79 (251)
T ss_dssp HHHHHHTTT--SSEEEEEESSHH---HHHHHHHHH--------------HTTTCCEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHc--CCEEEEEECCHH---HHHHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHHH
Confidence 678889888 999999998522 122222211 22235788999999986 56665553
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
.+|++||+||.... ...++..+++|+.++..+.+++... .+--++|++||..+....
T Consensus 80 ~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~------ 153 (251)
T d2c07a1 80 KILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN------ 153 (251)
T ss_dssp HHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------
T ss_pred HHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC------
Confidence 78999999997421 2456778999999988888766432 244689999997764221
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+...
T Consensus 154 ----~----------------------------~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~--- 198 (251)
T d2c07a1 154 ----V----------------------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD--- 198 (251)
T ss_dssp ----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------
T ss_pred ----C----------------------------CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccc---
Confidence 0 016899999999998887755 6899999999987442211
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. +......+.... | ..-+...+|+|.++..++...... ..++++.+.++
T Consensus 199 ----~~--~~~~~~~~~~~~----p-----l~R~~~pedvA~~v~fL~S~~s~~--itG~~i~vDGG 248 (251)
T d2c07a1 199 ----KI--SEQIKKNIISNI----P-----AGRMGTPEEVANLACFLSSDKSGY--INGRVFVIDGG 248 (251)
T ss_dssp -----C--CHHHHHHHHTTC----T-----TSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ----cc--CHHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCchhCC--CcCcEEEECCC
Confidence 11 122333332211 1 112667899999998888654431 24788888776
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.25 E-value=4.3e-11 Score=100.84 Aligned_cols=206 Identities=13% Similarity=0.055 Sum_probs=132.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+. +++++.. .+...++.++.+|++++ ++++.++
T Consensus 19 ~aia~~la~~--Ga~V~~~~r~~------~~l~~~~--------------~~~~~~~~~~~~Dvt~~------~~v~~~~ 70 (256)
T d1k2wa_ 19 RAFAEAYVRE--GARVAIADINL------EAARATA--------------AEIGPAACAIALDVTDQ------ASIDRCV 70 (256)
T ss_dssp HHHHHHHHHT--TEEEEEEESCH------HHHHHHH--------------HHHCTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHH--------------HHhCCceEEEEeeCCCH------HHHHHHH
Confidence 3678899998 99999999852 2333221 22345788999999987 5666655
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh-c---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQ-M---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++.. + .+-.++|++||..+....
T Consensus 71 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---- 146 (256)
T d1k2wa_ 71 AELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE---- 146 (256)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----
T ss_pred HHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc----
Confidence 3 68999999997532 244667899999999988876443 1 234589999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+.
T Consensus 147 ------~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~--- 189 (256)
T d1k2wa_ 147 ------A----------------------------LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH--- 189 (256)
T ss_dssp ------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT---
T ss_pred ------c----------------------------cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh---
Confidence 1 016899999999988877664 68999999999763321
Q ss_pred CCCcccCCCchHHHHHHHhc--Ccee----eEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGK--GIIR----TMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...+...... +... ..........=+...+|+|.+++.++...... ..+.++.+.++
T Consensus 190 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~--iTG~~i~vDGG 252 (256)
T d1k2wa_ 190 ----------WDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADY--IVAQTYNVDGG 252 (256)
T ss_dssp ----------HHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTT--CCSCEEEESTT
T ss_pred ----------hhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC--ccCceEEECcc
Confidence 0011110000 0000 00000000112567899999999887654421 24788988877
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.24 E-value=2.7e-10 Score=94.93 Aligned_cols=202 Identities=13% Similarity=0.100 Sum_probs=134.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++ +++.+. .....++.++.+|++++ +.+++++
T Consensus 19 ~aia~~la~~--Ga~V~~~~r~~------~~l~~~---------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 69 (242)
T d1cyda_ 19 RDTVKALHAS--GAKVVAVTRTN------SDLVSL---------------AKECPGIEPVCVDLGDW------DATEKAL 69 (242)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHH---------------HHHSTTCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHH---------------HHhcCCCeEEEEeCCCH------HHHHHHH
Confidence 3678999998 99999999952 233322 11224688899999986 5777777
Q ss_pred c---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccccccC
Q psy7539 81 E---TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 81 ~---~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
+ ++|++||+||.... ...++..+++|+.++..+.+++... +.-.++|++||.......
T Consensus 70 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------- 141 (242)
T d1cyda_ 70 GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-------- 141 (242)
T ss_dssp TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------
T ss_pred HHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC--------
Confidence 6 68999999997532 2346678999999999988866431 233589999997654321
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCc
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
| ....|+.+|.+.+.+.+..+. +|+++..+-||.+-.+...
T Consensus 142 --~----------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~----- 186 (242)
T d1cyda_ 142 --P----------------------------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK----- 186 (242)
T ss_dssp --T----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHH-----
T ss_pred --C----------------------------ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHH-----
Confidence 1 016899999999998887765 6899999999977432110
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.......+...+... .+ ..-+...+|+|.++..++...... ..++++.+.++
T Consensus 187 --~~~~~~~~~~~~~~~-------~p--l~R~~~peeva~~v~fL~S~~s~~--itG~~i~vDGG 238 (242)
T d1cyda_ 187 --KVSADPEFARKLKER-------HP--LRKFAEVEDVVNSILFLLSDRSAS--TSGGGILVDAG 238 (242)
T ss_dssp --HHTCCHHHHHHHHHH-------ST--TSSCBCHHHHHHHHHHHHSGGGTT--CCSSEEEESTT
T ss_pred --hhcCCHHHHHHHHhc-------CC--CCCCcCHHHHHHHHHHHhCchhcC--cCCceEEeCcc
Confidence 011111122222211 01 113567899999999888654431 24788888776
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.23 E-value=4.3e-11 Score=100.63 Aligned_cols=203 Identities=12% Similarity=0.088 Sum_probs=132.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
.++++|+++ |.+|+++.|..... +.+.+... .....++.++..|++.+. ++++.++
T Consensus 20 ~~A~~la~~--G~~vii~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~~~d~~~~~-----~~~~~~~~ 76 (254)
T d1sbya1 20 DTSRELVKR--NLKNFVILDRVENP---TALAELKA-------------INPKVNITFHTYDVTVPV-----AESKKLLK 76 (254)
T ss_dssp HHHHHHHHT--CCSEEEEEESSCCH---HHHHHHHH-------------HCTTSEEEEEECCTTSCH-----HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCcccH---HHHHHHHh-------------hCCCCCEEEEEeecCCCH-----HHHHHHHH
Confidence 578899998 99999999875543 22222211 122347889999998541 3344333
Q ss_pred ------cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc------CCCccEEEEeccccccCCcccccccCCC
Q psy7539 81 ------ETIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM------IHLQLFVYVSTAYCHPKEKVLEEKTYPP 148 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~------~~~~~~v~~SS~~~~~~~~~~~E~~~~~ 148 (318)
.++|++||+||... ...++..+++|+.|+.++..++... +...++|++||..+....
T Consensus 77 ~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~---------- 145 (254)
T d1sbya1 77 KIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI---------- 145 (254)
T ss_dssp HHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----------
T ss_pred HHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC----------
Confidence 37899999999764 4556789999999999888876542 123469999997764321
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCccc
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTD 224 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~ 224 (318)
| ....|+.||.+...+.+..+. +|+++..+.||.|..+.......|
T Consensus 146 ~----------------------------~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~-- 195 (254)
T d1sbya1 146 H----------------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSW-- 195 (254)
T ss_dssp T----------------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCG--
T ss_pred C----------------------------CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccc--
Confidence 0 016899999999988877665 589999999998854211000000
Q ss_pred CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 225 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
......+... ...+.....+++|++++.++..... +.++.+.++
T Consensus 196 --~~~~~~~~~~------------~~~~~~~~~e~va~~~~~~~~~~~t-----G~vi~vdgG 239 (254)
T d1sbya1 196 --LDVEPRVAEL------------LLSHPTQTSEQCGQNFVKAIEANKN-----GAIWKLDLG 239 (254)
T ss_dssp --GGSCTTHHHH------------HTTSCCEEHHHHHHHHHHHHHHCCT-----TCEEEEETT
T ss_pred --hhHHHHHHhc------------cccCCCCCHHHHHHHHHHhhhCCCC-----CCEEEECCC
Confidence 0000000000 0122345789999999988877653 788888877
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.23 E-value=1.8e-10 Score=97.11 Aligned_cols=188 Identities=15% Similarity=0.169 Sum_probs=126.7
Q ss_pred hhHHHHHhhCCCc-EEEEEEccCCC-CCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH
Q psy7539 2 VLLEKILRTCENV-KIYILLRPKKN-KNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~-~V~~l~R~~~~-~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~ 79 (318)
+++++|+++ |. .|+++.|+... ....+.+.++ .....++.++.+|++++ +++..+
T Consensus 24 a~a~~la~~--Ga~~vvl~~R~~~~~~~~~~~~~~l---------------~~~g~~v~~~~~Dv~d~------~~~~~~ 80 (259)
T d2fr1a1 24 QIARWLARR--GAPHLLLVSRSGPDADGAGELVAEL---------------EALGARTTVAACDVTDR------ESVREL 80 (259)
T ss_dssp HHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHH---------------HHTTCEEEEEECCTTCH------HHHHHH
T ss_pred HHHHHHHHC--CCCEEEEEeCCccCHHHHHHHHHHH---------------HhccccccccccccchH------HHHHHh
Confidence 678999999 88 68888886433 3333333322 22345799999999987 567766
Q ss_pred hc------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccC
Q psy7539 80 SE------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 80 ~~------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
.+ .+|.|||+||.... ...+...+++|+.|+.++.+++... ...+||++||..+.....
T Consensus 81 ~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~~SS~a~~~g~~------- 152 (259)
T d2fr1a1 81 LGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAP------- 152 (259)
T ss_dssp HHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCT-------
T ss_pred hccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEeeecchhhccCCc-------
Confidence 54 47899999997522 1334567889999999999988874 677999999976532210
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhhcCCcEEEecccccccccCCCCCCcccCC
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYMEAGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
....|+.+|...+.+..+....|++++.+.||.+.+. |....
T Consensus 153 -------------------------------~~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~------g~~~~- 194 (259)
T d2fr1a1 153 -------------------------------GLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGS------GMAEG- 194 (259)
T ss_dssp -------------------------------TCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC--------------
T ss_pred -------------------------------ccHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCC------ccccc-
Confidence 0178999999999988877668999999999976442 10000
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccC
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLS 273 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 273 (318)
.+...++ ......+..+++++++..++.....
T Consensus 195 -----~~~~~~~----------~~G~~~~~~~~~~~~l~~~l~~~~~ 226 (259)
T d2fr1a1 195 -----PVADRFR----------RHGVIEMPPETACRALQNALDRAEV 226 (259)
T ss_dssp ----------CT----------TTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred -----hHHHHHH----------hcCCCCCCHHHHHHHHHHHHhCCCc
Confidence 0011111 0112346789999999999887654
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.23 E-value=2.7e-10 Score=95.87 Aligned_cols=214 Identities=12% Similarity=0.025 Sum_probs=133.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.. ..+.+.+.+. . .....++.++.+|++++ ++++.++
T Consensus 18 ~aia~~la~~--Ga~V~i~~r~~~---~l~~~~~~~~--------~----~~~~~~~~~~~~Dvt~~------~~v~~~~ 74 (258)
T d1iy8a_ 18 RATAVRLAAE--GAKLSLVDVSSE---GLEASKAAVL--------E----TAPDAEVLTTVADVSDE------AQVEAYV 74 (258)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH--------H----HCTTCCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHHH--------h----hCCCCeEEEEeccCCCH------HHHHHHH
Confidence 3678999998 999999999532 1122211110 0 11234788999999987 5666554
Q ss_pred c-------CccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||... + .+.++..+++|+.|+..+.+++... .+-.++|++||..+....
T Consensus 75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---- 150 (258)
T d1iy8a_ 75 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---- 150 (258)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC----
T ss_pred HHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC----
Confidence 3 6899999999631 1 1346679999999999988876432 244589999997764221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+..+....
T Consensus 151 ------~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~ 196 (258)
T d1iy8a_ 151 ------G----------------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN 196 (258)
T ss_dssp ------S----------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHH
T ss_pred ------C----------------------------CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHH
Confidence 0 017899999999988877654 68999999999773321000
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..... ....+......+... . ...-+...+|+|.++..++...... ..+.++.+.++
T Consensus 197 ~~~~~-~~~~~~~~~~~~~~~-------~--pl~R~~~p~dvA~~v~fL~S~~s~~--itG~~i~VDGG 253 (258)
T d1iy8a_ 197 SMKQL-DPENPRKAAEEFIQV-------N--PSKRYGEAPEIAAVVAFLLSDDASY--VNATVVPIDGG 253 (258)
T ss_dssp HHHHH-CTTCHHHHHHHHHTT-------C--TTCSCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred HHhhc-CcccHHHHHHHHHhc-------C--CCCCCcCHHHHHHHHHHHhCchhcC--CcCceEEcCcc
Confidence 00000 000011122222221 0 1112567899999999888654431 24788998887
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=1.8e-11 Score=103.14 Aligned_cols=212 Identities=12% Similarity=0.072 Sum_probs=133.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |.+|++..|+.. ..+.+.+.+.. .....++.++.+|++++ ++++.++
T Consensus 17 ~aia~~la~~--Ga~V~i~~r~~~---~~~~~~~~l~~------------~~~~~~~~~~~~Dv~~~------~~v~~~~ 73 (254)
T d2gdza1 17 RAFAEALLLK--GAKVALVDWNLE---AGVQCKAALHE------------QFEPQKTLFIQCDVADQ------QQLRDTF 73 (254)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHTT------------TSCGGGEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHHHH------------hcCCCcEEEEEeecCCH------HHHHHHH
Confidence 3678899988 999999999522 11222221110 11234788999999986 5666655
Q ss_pred c-------CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc----C--CCccEEEEeccccccCCcccccccCC
Q psy7539 81 E-------TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM----I--HLQLFVYVSTAYCHPKEKVLEEKTYP 147 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~~~~~v~~SS~~~~~~~~~~~E~~~~ 147 (318)
+ ++|++||+||.... .+++..+++|+.++.++..++... . ...++|++||..+....
T Consensus 74 ~~~~~~~G~iDilVnnAg~~~~-~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~--------- 143 (254)
T d2gdza1 74 RKVVDHFGRLDILVNNAGVNNE-KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV--------- 143 (254)
T ss_dssp HHHHHHHSCCCEEEECCCCCCS-SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---------
T ss_pred HHHHHHcCCcCeeccccccccc-ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC---------
Confidence 3 68999999998643 456788999999888777766542 1 12359999997764321
Q ss_pred CCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHH------hhhcCCcEEEecccccccccCCCCCC
Q psy7539 148 PPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTE------YMEAGMPCMILRPSIIIPIWKDPLPG 221 (318)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~~~~~~~~ilR~~~v~G~~~~~~~g 221 (318)
|. ...|+.||.+.+.+.+. +..+|+++..+.||.|-.+...
T Consensus 144 -~~----------------------------~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~---- 190 (254)
T d2gdza1 144 -AQ----------------------------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE---- 190 (254)
T ss_dssp -TT----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHH----
T ss_pred -CC----------------------------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhh----
Confidence 10 16899999999988763 2236899999999977321100
Q ss_pred cccCCCchH------HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCCCCCceeHH
Q psy7539 222 WTDNINGPT------GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTANKDFQITWY 295 (318)
Q Consensus 222 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~~~~~~~~~ 295 (318)
.+.... .....+.. . .+ ..-+...+|+|++++.++..... .+.++.+.++ ..+.++
T Consensus 191 ---~~~~~~~~~~~~~~~~~~~~-~---~p-----~~r~~~pedvA~~v~fL~s~~~i----tG~~i~VdGG--~~~~~~ 252 (254)
T d2gdza1 191 ---SIEKEENMGQYIEYKDHIKD-M---IK-----YYGILDPPLIANGLITLIEDDAL----NGAIMKITTS--KGIHFQ 252 (254)
T ss_dssp ---GGGCHHHHGGGGGGHHHHHH-H---HH-----HHCCBCHHHHHHHHHHHHHCTTC----SSCEEEEETT--TEEEEC
T ss_pred ---hccccccccccHHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHHcCCCC----CCCEEEECCC--Ceeecc
Confidence 000000 00000000 0 00 01245678999999998876543 5889999888 666554
Q ss_pred H
Q psy7539 296 D 296 (318)
Q Consensus 296 e 296 (318)
|
T Consensus 253 ~ 253 (254)
T d2gdza1 253 D 253 (254)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.22 E-value=9e-11 Score=98.95 Aligned_cols=207 Identities=15% Similarity=0.105 Sum_probs=132.5
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++ +++++..+ .+ .....++.++.+|++++ ++++.++
T Consensus 22 ~aia~~la~~--Ga~V~~~~r~~------~~l~~~~~-----~~------~~~g~~~~~~~~Dv~~~------~~v~~~~ 76 (259)
T d2ae2a_ 22 YGIVEELASL--GASVYTCSRNQ------KELNDCLT-----QW------RSKGFKVEASVCDLSSR------SERQELM 76 (259)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHHH-----HH------HHTTCEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHHH-----HH------HhcCCCceEEEeeCCCH------HHHHHHH
Confidence 3678999998 99999999852 22222211 01 22235788899999986 4555443
Q ss_pred -------c-CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 -------E-TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 -------~-~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
. .+|++||+||.... .+.++..+++|+.|+..+.+++... .+--++|++||..+....
T Consensus 77 ~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---- 152 (259)
T d2ae2a_ 77 NTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV---- 152 (259)
T ss_dssp HHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC----
T ss_pred HHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc----
Confidence 2 48999999997422 2346679999999998888876542 234589999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.||...+.+.+..+. +|+++..+.||.|-.+...
T Consensus 153 ------~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~- 197 (259)
T d2ae2a_ 153 ------P----------------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVE- 197 (259)
T ss_dssp ------T----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHH-
T ss_pred ------c----------------------------cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHH-
Confidence 1 017899999999988887765 6899999999977332100
Q ss_pred CCCcccCCCch--HHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGP--TGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.....+ ...+..+... .+ ..-+...+|+|.+++.++...... -.+.++.+.++
T Consensus 198 -----~~~~~~~~~~~~~~~~~~-------~p--l~R~g~pedvA~~v~fL~S~~s~~--itG~~i~VDGG 252 (259)
T d2ae2a_ 198 -----MTIQDPEQKENLNKLIDR-------CA--LRRMGEPKELAAMVAFLCFPAASY--VTGQIIYVDGG 252 (259)
T ss_dssp -----HHTTSHHHHHHHHHHHHT-------ST--TCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hhhhchhhHHHHHHHHhc-------CC--CCCCcCHHHHHHHHHHHhCchhCC--CcCcEEEECCC
Confidence 000111 1122222221 11 112567899999999888654421 24788888776
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.21 E-value=4.5e-10 Score=94.46 Aligned_cols=210 Identities=11% Similarity=0.047 Sum_probs=133.8
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++. ++++..+ .+ .....++.++.+|+++. ++++.++
T Consensus 20 ~aia~~la~~--G~~V~i~~r~~~------~l~~~~~-----~~------~~~~~~~~~~~~D~s~~------~~~~~~~ 74 (258)
T d1ae1a_ 20 YAIVEELAGL--GARVYTCSRNEK------ELDECLE-----IW------REKGLNVEGSVCDLLSR------TERDKLM 74 (258)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH------HHHHHHH-----HH------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH------HHHHHHH-----HH------HhcCCCceEEEeecCCH------HHHHHHH
Confidence 3678899998 999999999532 2222111 11 22345788899999986 4555443
Q ss_pred c--------CccEEEEcccccC-------cchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 81 E--------TIHIVYHIAATVR-------FDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~--------~~d~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|++||+||... ....+...+++|+.++..+.+++... ....++|++||..+....
T Consensus 75 ~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~---- 150 (258)
T d1ae1a_ 75 QTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL---- 150 (258)
T ss_dssp HHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC----
T ss_pred HHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc----
Confidence 2 4799999999752 22456779999999998888776532 245689999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.+|.+.+.+.+..+. +|+++..+.||.+..+....
T Consensus 151 ------~----------------------------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~ 196 (258)
T d1ae1a_ 151 ------P----------------------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVET 196 (258)
T ss_dssp ------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred ------c----------------------------cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhh
Confidence 1 017899999999988887765 68999999999885432111
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. .............+... .+- .-+...+|+|.++..++...... ..+.++.+.++
T Consensus 197 ~---~~~~~~~~~~~~~~~~~-------~pl--gR~~~pediA~~v~fL~S~~s~~--itG~~i~vDGG 251 (258)
T d1ae1a_ 197 A---IKKNPHQKEEIDNFIVK-------TPM--GRAGKPQEVSALIAFLCFPAASY--ITGQIIWADGG 251 (258)
T ss_dssp ----------CHHHHHHHHHH-------STT--CSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred h---hhhhhhhHHHHHHHHhc-------CCC--CCCcCHHHHHHHHHHHhChhhCC--CcCcEEEeCCC
Confidence 1 00111112233333221 111 12788999999999988544421 24788888776
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.20 E-value=2.8e-10 Score=95.41 Aligned_cols=204 Identities=11% Similarity=0.032 Sum_probs=131.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+. +..+.+.+.+. ...++.++.+|++++ ++++.++
T Consensus 20 ~aia~~la~~--Ga~V~~~~r~~---~~~~~~~~~~~---------------~~~~~~~~~~Dv~~~------~~v~~~~ 73 (251)
T d1zk4a1 20 LAIATKFVEE--GAKVMITGRHS---DVGEKAAKSVG---------------TPDQIQFFQHDSSDE------DGWTKLF 73 (251)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH---HHHHHHHHHHC---------------CTTTEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH---HHHHHHHHHhC---------------CCCcEEEEEccCCCH------HHHHHHH
Confidence 3678999998 99999999952 12222222211 134789999999986 4665554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCC-ccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHL-QLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~-~~~v~~SS~~~~~~~~~~~ 142 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++... .+. .++|++||..+....
T Consensus 74 ~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~---- 149 (251)
T d1zk4a1 74 DATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD---- 149 (251)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC----
T ss_pred HHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC----
Confidence 3 68999999997521 2445679999999999988876532 122 378999997764221
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhh------hcCCcEEEecccccccccC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYM------EAGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~------~~~~~~~ilR~~~v~G~~~ 216 (318)
| ....|+.||...+.+.+..+ ++|+++..+.||.+-.+..
T Consensus 150 ------~----------------------------~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~ 195 (251)
T d1zk4a1 150 ------P----------------------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLV 195 (251)
T ss_dssp ------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHH
T ss_pred ------C----------------------------CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhH
Confidence 1 01689999999988776543 2579999999997743211
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+....+.. ...... . . + ..-+...+|+|.++..++...... ..+..+.+.++
T Consensus 196 -------~~~~~~~~-~~~~~~-~---~---p--l~R~~~pedvA~~v~fL~S~~s~~--itG~~i~vDGG 247 (251)
T d1zk4a1 196 -------DDLPGAEE-AMSQRT-K---T---P--MGHIGEPNDIAYICVYLASNESKF--ATGSEFVVDGG 247 (251)
T ss_dssp -------HTSTTHHH-HHTSTT-T---C---T--TSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -------HhcCCHHH-HHHHHh-C---C---C--CCCCcCHHHHHHHHHHHhCchhCC--CcCcEEEECcc
Confidence 11111111 111111 0 0 1 113667899999999888654431 24788888776
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.20 E-value=1e-10 Score=97.69 Aligned_cols=206 Identities=13% Similarity=0.066 Sum_probs=131.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..++. .+..+.+.+.+ .....++.++.+|++++ ++++.++
T Consensus 15 ~a~a~~la~~--Ga~V~i~~~~~--~~~~~~~~~~~--------------~~~g~~~~~~~~Dv~~~------~~v~~~~ 70 (244)
T d1edoa_ 15 KAIALSLGKA--GCKVLVNYARS--AKAAEEVSKQI--------------EAYGGQAITFGGDVSKE------ADVEAMM 70 (244)
T ss_dssp HHHHHHHHHT--TCEEEEEESSC--HHHHHHHHHHH--------------HHHTCEEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCC--HHHHHHHHHHH--------------HHcCCcEEEEeCCCCCH------HHHHHHH
Confidence 3678999998 99998875532 22222332221 22345788999999987 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++... .+--++|++||..+....
T Consensus 71 ~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~----- 145 (244)
T d1edoa_ 71 KTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN----- 145 (244)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----
T ss_pred HHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC-----
Confidence 3 68999999997522 2446679999999988888776542 244589999997764221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+..
T Consensus 146 -----~----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~--- 189 (244)
T d1edoa_ 146 -----I----------------------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT--- 189 (244)
T ss_dssp -----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH---
T ss_pred -----C----------------------------CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHH---
Confidence 0 017899999999998887765 689999999997732211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
..+ +......+... . | ..-+...+|+|.++..++..+... -..++++.+.++
T Consensus 190 ----~~~--~~~~~~~~~~~-~---p-----l~R~~~p~dvA~~v~fLa~S~~a~-~itG~~i~vdGG 241 (244)
T d1edoa_ 190 ----AKL--GEDMEKKILGT-I---P-----LGRTGQPENVAGLVEFLALSPAAS-YITGQAFTIDGG 241 (244)
T ss_dssp ----HTT--CHHHHHHHHTS-C---T-----TCSCBCHHHHHHHHHHHHHCSGGG-GCCSCEEEESTT
T ss_pred ----HHh--hHHHHHHHHhc-C---C-----CCCCcCHHHHHHHHHHHHCCchhc-CCcCCeEEeCCC
Confidence 111 11222222221 0 0 113567899999998875332210 014788888776
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.20 E-value=2.4e-10 Score=96.24 Aligned_cols=204 Identities=12% Similarity=0.069 Sum_probs=121.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|++. |++|++..|++ +++++... .+ .....++.++.+|++++ ++++.+++
T Consensus 23 aiA~~la~~--Ga~V~~~~r~~------~~l~~~~~-----~~------~~~~~~~~~~~~Dv~~~------~~v~~~~~ 77 (259)
T d1xq1a_ 23 AIVEEFAGF--GAVIHTCARNE------YELNECLS-----KW------QKKGFQVTGSVCDASLR------PEREKLMQ 77 (259)
T ss_dssp HHHHHHHHT--TCEEEEEESCH------HHHHHHHH-----HH------HHTTCCEEEEECCTTSH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCH------HHHHHHHH-----HH------HhcCCceEEEeccCCCH------HHHHHHHH
Confidence 578899998 99999999952 22222211 01 22235789999999976 45554332
Q ss_pred --------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 82 --------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 --------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
.+|++||+||.... ...++..+++|+.|+..+.+++... .+--++|++||..+....
T Consensus 78 ~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~----- 152 (259)
T d1xq1a_ 78 TVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA----- 152 (259)
T ss_dssp HHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------
T ss_pred HHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc-----
Confidence 48999999997421 2456779999999998888876542 244589999997653221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||.+.+.+.+..+. +|+++..+-||.+-.+...
T Consensus 153 -----~----------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~-- 197 (259)
T d1xq1a_ 153 -----S----------------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE-- 197 (259)
T ss_dssp -----------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------
T ss_pred -----c----------------------------ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhh--
Confidence 0 017899999999988877654 6899999999977432111
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.... ......+.. ..| ..-+...+|+|.++..++...... ..+.++.+.++
T Consensus 198 -----~~~~-~~~~~~~~~----~~p-----l~R~~~pedvA~~v~fL~S~~s~~--iTG~~i~vDGG 248 (259)
T d1xq1a_ 198 -----AVYD-DEFKKVVIS----RKP-----LGRFGEPEEVSSLVAFLCMPAASY--ITGQTICVDGG 248 (259)
T ss_dssp -----------------------------------CCGGGGHHHHHHHTSGGGTT--CCSCEEECCCC
T ss_pred -----hhch-HHHHHHHHh----CCC-----CCCCcCHHHHHHHHHHHhCchhcC--CcCcEEEeCCC
Confidence 1110 001110110 001 112456789999999888544321 24778888776
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.20 E-value=6.7e-10 Score=93.98 Aligned_cols=207 Identities=11% Similarity=0.107 Sum_probs=133.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |.+|++..|+.. ..+.+.+.+. ...++.++.+|++++ ++++.+++
T Consensus 21 aia~~la~~--Ga~V~i~~r~~~---~~~~~~~~l~---------------~~~~~~~~~~Dv~~~------~~v~~~~~ 74 (268)
T d2bgka1 21 TTAKLFVRY--GAKVVIADIADD---HGQKVCNNIG---------------SPDVISFVHCDVTKD------EDVRNLVD 74 (268)
T ss_dssp HHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHC---------------CTTTEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCHH---HHHHHHHHhc---------------CCCceEEEEccCCCH------HHHHHHHH
Confidence 578899988 999999999521 1222222211 124678899999986 56666553
Q ss_pred -------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVRF---------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.+|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++|++||..+.....
T Consensus 75 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~--- 151 (268)
T d2bgka1 75 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE--- 151 (268)
T ss_dssp HHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT---
T ss_pred HHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc---
Confidence 78999999996421 1345678999999988888876532 2445899999976532210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
+ ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+...
T Consensus 152 ------~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~- 196 (268)
T d2bgka1 152 ------G----------------------------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLT- 196 (268)
T ss_dssp ------T----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCT-
T ss_pred ------c----------------------------cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHh-
Confidence 0 014799999999988877654 6899999999988553322
Q ss_pred CCCcccCCCc-hHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNING-PTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...+ ............. . ...-+...+|+|.+++.++...... ..++++.+.++
T Consensus 197 ------~~~~~~~~~~~~~~~~~~-----~--~~gr~~~pedvA~~v~fL~S~~s~~--itGq~i~VDGG 251 (268)
T d2bgka1 197 ------DVFGVDSSRVEELAHQAA-----N--LKGTLLRAEDVADAVAYLAGDESKY--VSGLNLVIDGG 251 (268)
T ss_dssp ------TSSSCCHHHHHHHHHHTC-----S--SCSCCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------hhhcCCHHHHHHHHHhcc-----c--cCCCCcCHHHHHHHHHHHhChhhCC--ccCceEEECcC
Confidence 1111 1111111111000 0 0113567899999999888654321 25889999887
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=3.3e-10 Score=94.79 Aligned_cols=205 Identities=12% Similarity=0.038 Sum_probs=132.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++ +++++. .....+..++.+|++++ +++++++
T Consensus 20 ~aia~~la~~--Ga~V~i~~r~~------~~~~~~---------------~~~~~~~~~~~~Dvs~~------~~v~~~~ 70 (250)
T d1ydea1 20 AGIVRAFVNS--GARVVICDKDE------SGGRAL---------------EQELPGAVFILCDVTQE------DDVKTLV 70 (250)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHH---------------HHHCTTEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHH---------------HHhcCCCeEEEccCCCH------HHHHHHH
Confidence 3678899998 99999999852 233322 11224678899999986 5666654
Q ss_pred c-------CccEEEEcccccC----cc----hhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVR----FD----DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||... +. +.++..+++|+.|+..+.+++... .+--++|++||.++....
T Consensus 71 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~----- 145 (250)
T d1ydea1 71 SETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ----- 145 (250)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-----
T ss_pred HHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccc-----
Confidence 3 6899999999631 11 335678999999999888876542 122589999997664321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.+|.+.+.+.+..+. +|+++..+.||.|-.+.....
T Consensus 146 -----~----------------------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~ 192 (250)
T d1ydea1 146 -----A----------------------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL 192 (250)
T ss_dssp -----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHH
T ss_pred -----c----------------------------CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHH
Confidence 0 016899999999988877765 689999999997732110000
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
......+...+....... + ..-+...+|+|.++..++.. .. -..+.++.+.++
T Consensus 193 ---~~~~~~~~~~~~~~~~~~-------p--l~R~g~p~eva~~v~fL~Sd-a~--~itG~~i~vDGG 245 (250)
T d1ydea1 193 ---AALMPDPRASIREGMLAQ-------P--LGRMGQPAEVGAAAVFLASE-AN--FCTGIELLVTGG 245 (250)
T ss_dssp ---HTTSSSHHHHHHHHHHTS-------T--TSSCBCHHHHHHHHHHHHHH-CT--TCCSCEEEESTT
T ss_pred ---hhcCCCHHHHHHHHHhcC-------C--CCCCCCHHHHHHHHHHHhCc-cC--CCcCCeEEECCC
Confidence 000111122222222211 1 11366789999999987753 22 135888888877
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.19 E-value=6.4e-10 Score=93.14 Aligned_cols=208 Identities=13% Similarity=0.046 Sum_probs=132.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.. ...+...++ . .....++.++.+|++++ ++++.++
T Consensus 19 ~aia~~la~~--Ga~V~i~~r~~~--~~~~~~~~l---------~-----~~~g~~~~~~~~Dv~~~------~~v~~~~ 74 (251)
T d1vl8a_ 19 FGIAQGLAEA--GCSVVVASRNLE--EASEAAQKL---------T-----EKYGVETMAFRCDVSNY------EEVKKLL 74 (251)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHH---------H-----HHHCCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHH---------H-----HHhCCcEEEEEccCCCH------HHHHHHH
Confidence 3678999998 999999999532 111111111 0 22235788999999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ ++|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++|++||..+...
T Consensus 75 ~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~------ 148 (251)
T d1vl8a_ 75 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV------ 148 (251)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC------
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc------
Confidence 3 68999999997421 2346678999999999988876543 23348999998654211
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
+.| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+..
T Consensus 149 ---~~~----------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~--- 194 (251)
T d1vl8a_ 149 ---TMP----------------------------NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT--- 194 (251)
T ss_dssp ---CSS----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT---
T ss_pred ---cCc----------------------------cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHH---
Confidence 000 016899999999988877755 689999999997743211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
............+.... | ..-+...+|+|++++.++...... ..+.++.+.++
T Consensus 195 ----~~~~~~~~~~~~~~~~~----p-----l~R~~~pedvA~~v~fL~S~~a~~--itG~~i~vDGG 247 (251)
T d1vl8a_ 195 ----EAVFSDPEKLDYMLKRI----P-----LGRTGVPEDLKGVAVFLASEEAKY--VTGQIIFVDGG 247 (251)
T ss_dssp ----HHHHTCHHHHHHHHHTC----T-----TSSCBCGGGGHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ----HhccCCHHHHHHHHhcC----C-----CCCCCCHHHHHHHHHHHhCchhCC--CcCcEEEeCcC
Confidence 01111112222222211 1 112446789999999887654421 24888888776
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.18 E-value=5.3e-10 Score=93.15 Aligned_cols=198 Identities=15% Similarity=0.026 Sum_probs=130.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++ +++++..+ .-+.+++.+|++++ +++++++
T Consensus 19 ~aia~~l~~~--G~~V~~~~r~~------~~l~~~~~----------------~~~~~~~~~Dv~~~------~~v~~~~ 68 (242)
T d1ulsa_ 19 RATLELFAKE--GARLVACDIEE------GPLREAAE----------------AVGAHPVVMDVADP------ASVERGF 68 (242)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHHH----------------TTTCEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHHH----------------HcCCeEEEEecCCH------HHHHHHH
Confidence 3678999998 99999999952 23333211 12567899999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|++||+||.... .+.++..+++|+.|+..+.+++... .+-..++++||.+..+.
T Consensus 69 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~------ 142 (242)
T d1ulsa_ 69 AEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN------ 142 (242)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC------
T ss_pred HHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC------
Confidence 3 68999999997522 2346679999999999988877643 23345667777543221
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+...
T Consensus 143 -----~----------------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~-- 187 (242)
T d1ulsa_ 143 -----L----------------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA-- 187 (242)
T ss_dssp -----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS--
T ss_pred -----C----------------------------CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh--
Confidence 0 017899999999988877654 6899999999988432211
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. +......+.... | ..-+...+|+|.++..++...... ..+.++.+.++
T Consensus 188 -----~~--~~~~~~~~~~~~----p-----l~R~~~pedia~~v~fL~S~~s~~--itG~~i~vDGG 237 (242)
T d1ulsa_ 188 -----KV--PEKVREKAIAAT----P-----LGRAGKPLEVAYAALFLLSDESSF--ITGQVLFVDGG 237 (242)
T ss_dssp -----SS--CHHHHHHHHHTC----T-----TCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----cC--CHHHHHHHHhcC----C-----CCCCCCHHHHHHHHHHHhchhhCC--CCCcEEEECCC
Confidence 11 122222222211 0 113557899999999888654421 24788888777
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.17 E-value=5.1e-10 Score=93.11 Aligned_cols=182 Identities=13% Similarity=0.090 Sum_probs=120.7
Q ss_pred ChhHHHHHhhCCCcE-------EEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCH
Q psy7539 1 KVLLEKILRTCENVK-------IYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISA 73 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~-------V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~ 73 (318)
++++++|+++ |++ |++..|+. +..+.+.+.+ .....++.++.+|++++
T Consensus 15 ~aia~~la~~--G~~~~~~~~~v~~~~r~~---~~l~~~~~~~--------------~~~g~~~~~~~~Dvt~~------ 69 (240)
T d2bd0a1 15 RAIALEFARA--ARHHPDFEPVLVLSSRTA---ADLEKISLEC--------------RAEGALTDTITADISDM------ 69 (240)
T ss_dssp HHHHHHHHHH--TTTCTTCCEEEEEEESCH---HHHHHHHHHH--------------HTTTCEEEEEECCTTSH------
T ss_pred HHHHHHHHHh--CccccccCcEEEEEeCCH---HHHHHHHHHH--------------HhcCCcEEEEEecCCCH------
Confidence 3678899988 765 77777742 1222222211 22235788999999987
Q ss_pred HHHHHHhc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEecccccc
Q psy7539 74 EDRQMLSE-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHP 136 (318)
Q Consensus 74 ~~~~~~~~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~ 136 (318)
++++.+++ .+|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++|++||..+..
T Consensus 70 ~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~ 149 (240)
T d2bd0a1 70 ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK 149 (240)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC
Confidence 56665543 68999999997522 2456679999999988888776542 1345899999977643
Q ss_pred CCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc
Q psy7539 137 KEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII 212 (318)
Q Consensus 137 ~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~ 212 (318)
.. | ....|+.||.+.+.+.+..+. +|+++..+.||.+-
T Consensus 150 ~~----------~----------------------------~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~ 191 (240)
T d2bd0a1 150 AF----------R----------------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVY 191 (240)
T ss_dssp CC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred CC----------C----------------------------CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCccc
Confidence 21 1 016899999999988877654 68999999999773
Q ss_pred cccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 213 PIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 213 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
.+... .+ .......+...+|+|++++.++..+.
T Consensus 192 T~~~~-------~~--------------------~~~~~~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 192 TPMWG-------KV--------------------DDEMQALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp STTTC-------CC--------------------CSTTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred Cchhh-------hc--------------------CHhhHhcCCCHHHHHHHHHHHHcCCc
Confidence 32110 00 00111234457999999999887654
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.17 E-value=2.7e-10 Score=95.59 Aligned_cols=206 Identities=9% Similarity=-0.005 Sum_probs=129.2
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++ +++++.. .+...+..++.+|++++ ++.+.++
T Consensus 20 ~aia~~la~~--Ga~V~~~~~~~------~~~~~~~--------------~~~~~~~~~~~~Dv~~~------~~~~~~~ 71 (253)
T d1hxha_ 20 LEVVKLLLGE--GAKVAFSDINE------AAGQQLA--------------AELGERSMFVRHDVSSE------ADWTLVM 71 (253)
T ss_dssp HHHHHHHHHT--TCEEEEECSCH------HHHHHHH--------------HHHCTTEEEECCCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHH--------------HHhCCCeEEEEeecCCH------HHHHHHH
Confidence 3678999998 99999998842 2222221 22345778899999976 4555554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
+ .+|++||+||.... .+.++..+++|+.|+..+.+++... ++--++|++||.++....
T Consensus 72 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~------ 145 (253)
T d1hxha_ 72 AAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPI------ 145 (253)
T ss_dssp HHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCC------
T ss_pred HHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCc------
Confidence 3 68999999997522 2446779999999988888776542 123589999997764321
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----c--CCcEEEecccccccccCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----A--GMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~--~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.||.+.+.+.+..+. . ++++..+-||.+-.+....
T Consensus 146 ----~----------------------------~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~ 193 (253)
T d1hxha_ 146 ----E----------------------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA 193 (253)
T ss_dssp ----T----------------------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH
T ss_pred ----c----------------------------ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHh
Confidence 0 016899999999988876543 2 4788899999774321000
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
. +.+... ........ .....--+...+|+|.+++.++...... ..++++++.++
T Consensus 194 ~--~~~~~~------~~~~~~~~-----~~~~~gr~~~pedvA~~v~fL~S~~s~~--itG~~i~VDGG 247 (253)
T d1hxha_ 194 S--LPKGVS------KEMVLHDP-----KLNRAGRAYMPERIAQLVLFLASDESSV--MSGSELHADNS 247 (253)
T ss_dssp H--SCTTCC------HHHHBCBT-----TTBTTCCEECHHHHHHHHHHHHSGGGTT--CCSCEEEESSS
T ss_pred h--Ccchhh------HHHHHhCc-----cccccCCCCCHHHHHHHHHHHhChhhCC--CcCcEEEECcc
Confidence 0 000000 00011000 0011113667899999999888654431 24788888766
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=1.3e-10 Score=96.95 Aligned_cols=148 Identities=16% Similarity=0.079 Sum_probs=103.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+. +++++..+ .+ .....++.++.+|++++ ++++.++
T Consensus 21 ~~ia~~la~~--G~~V~l~~r~~------~~l~~~~~-----~~------~~~~~~~~~~~~Dvs~~------~~v~~~~ 75 (244)
T d1yb1a_ 21 RLTAYEFAKL--KSKLVLWDINK------HGLEETAA-----KC------KGLGAKVHTFVVDCSNR------EDIYSSA 75 (244)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHHH-----HH------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHHH-----HH------HhcCCcEEEEEeeCCCH------HHHHHHH
Confidence 3688999998 99999999952 22222211 01 22345889999999987 4666554
Q ss_pred c-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 E-------TIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
+ .+|++||+||..... ..++..+++|+.|+..+.+++... .+-.++|++||..+.....
T Consensus 76 ~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~---- 151 (244)
T d1yb1a_ 76 KKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP---- 151 (244)
T ss_dssp HHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH----
T ss_pred HHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCC----
Confidence 3 689999999985221 234578999999988888765432 2445899999977643210
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-------cCCcEEEeccccc
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-------AGMPCMILRPSII 211 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~~~ilR~~~v 211 (318)
. ...|+.||.+.+.+.+..+. .|+.+..+.||.|
T Consensus 152 -----------------------------~-----~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v 192 (244)
T d1yb1a_ 152 -----------------------------F-----LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFV 192 (244)
T ss_dssp -----------------------------H-----HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHH
T ss_pred -----------------------------C-----cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCC
Confidence 0 06899999999888877653 3689999999976
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.11 E-value=2e-09 Score=90.82 Aligned_cols=216 Identities=10% Similarity=0.008 Sum_probs=126.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.. ..+.+.+.+. .. .....++.++.+|++++ ++++.++
T Consensus 19 ~aia~~la~~--Ga~V~~~~r~~~---~l~~~~~~l~--------~~---~~~~~~~~~~~~Dvt~~------~~v~~~~ 76 (264)
T d1spxa_ 19 RATAVLFARE--GAKVTITGRHAE---RLEETRQQIL--------AA---GVSEQNVNSVVADVTTD------AGQDEIL 76 (264)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH--------HT---TCCGGGEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHHH--------hc---CCCcCceEEEEccCCCH------HHHHHHH
Confidence 3678999998 999999999532 1222221111 00 11234789999999986 5666554
Q ss_pred c-------CccEEEEcccccC-----------cchhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEecccc-ccCCc
Q psy7539 81 E-------TIHIVYHIAATVR-----------FDDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYC-HPKEK 139 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~-----------~~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~-~~~~~ 139 (318)
+ ++|++||+||... ..+.++..+++|+.|+..+.+++... ++-..+|+++|... ...
T Consensus 77 ~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~-- 154 (264)
T d1spxa_ 77 STTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA-- 154 (264)
T ss_dssp HHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC--
T ss_pred HHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccccc--
Confidence 3 6899999999631 11346678999999998888877542 12246666666433 211
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
.|. ...|+.||.+.+.+.+..+. +|+++..+.||.|-.+.
T Consensus 155 --------~~~----------------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~ 198 (264)
T d1spxa_ 155 --------TPD----------------------------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 198 (264)
T ss_dssp --------CTT----------------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred --------CCC----------------------------chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence 110 16799999999988877655 68999999999874322
Q ss_pred CCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc-cCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF-LSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~-~~~~~~~~~~~ni~~~ 287 (318)
....................+... .| ..-+...+|+|.+++.++..+ ... ..+.++.+.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~----~P-----l~R~g~pedvA~~v~fL~S~~~s~~--itG~~i~vDGG 260 (264)
T d1spxa_ 199 GSAMGMPEETSKKFYSTMATMKEC----VP-----AGVMGQPQDIAEVIAFLADRKTSSY--IIGHQLVVDGG 260 (264)
T ss_dssp --------------HHHHHHHHHH----CT-----TSSCBCHHHHHHHHHHHHCHHHHTT--CCSCEEEESTT
T ss_pred hhccCCcHHHHHHHHHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhCCcccCC--ccCceEEeCCC
Confidence 111000000000000111111110 01 112567899999999888643 211 14888988877
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=4e-10 Score=96.77 Aligned_cols=211 Identities=13% Similarity=0.066 Sum_probs=130.6
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|++..|+.. ++++.. +.+.... ......++.++.+|++++ ++++.+++
T Consensus 27 aia~~la~~--Ga~Vvi~~r~~~------~l~~~~-----~el~~~~-~~~~~~~~~~~~~Dvs~~------~~v~~~~~ 86 (297)
T d1yxma1 27 AIVKELLEL--GSNVVIASRKLE------RLKSAA-----DELQANL-PPTKQARVIPIQCNIRNE------EEVNNLVK 86 (297)
T ss_dssp HHHHHHHHT--TCEEEEEESCHH------HHHHHH-----HHHHHTS-CTTCCCCEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCHH------HHHHHH-----HHHHhhh-ccccCceEEEEeccCCCH------HHHHHHHH
Confidence 678899998 999999999532 222110 0111110 012235789999999987 56665543
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
++|++||+||.... ...++..+++|+.|+..+.+++... .+-..+|++||....+.
T Consensus 87 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~------- 159 (297)
T d1yxma1 87 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF------- 159 (297)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-------
T ss_pred HHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc-------
Confidence 78999999997421 2446678999999999988877542 13346777776433221
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP 220 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~ 220 (318)
| ....|+.+|.+.+.+.+..+. +|+++..+.||.|..+....
T Consensus 160 ----~----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~-- 205 (297)
T d1yxma1 160 ----P----------------------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVE-- 205 (297)
T ss_dssp ----T----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGT--
T ss_pred ----c----------------------------ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhh--
Confidence 1 017899999999988877765 68999999999885432111
Q ss_pred CcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.++.. -...........| ..-+...+|+|.+++.++...... ..++++.+.++
T Consensus 206 -----~~~~~--~~~~~~~~~~~~p-----lgR~g~pedvA~~v~fL~Sd~s~~--iTG~~i~VDGG 258 (297)
T d1yxma1 206 -----NYGSW--GQSFFEGSFQKIP-----AKRIGVPEEVSSVVCFLLSPAASF--ITGQSVDVDGG 258 (297)
T ss_dssp -----TSGGG--GGGGGTTGGGGST-----TSSCBCTHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -----hcccc--CHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHhCchhcC--cCCcEEEeCcC
Confidence 11100 0001111111111 112556789999999988654431 24888888776
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.09 E-value=1.4e-09 Score=92.12 Aligned_cols=214 Identities=14% Similarity=0.062 Sum_probs=128.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++. ..+.+.+.+... .....++.++.+|++++ ++++.++
T Consensus 19 ~aia~~la~~--Ga~V~l~~r~~~---~l~~~~~~l~~~-----------~~~~~~~~~~~~Dvs~~------~~v~~~~ 76 (272)
T d1xkqa_ 19 RTTAILFAQE--GANVTITGRSSE---RLEETRQIILKS-----------GVSEKQVNSVVADVTTE------DGQDQII 76 (272)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHHTT-----------TCCGGGEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHH---HHHHHHHHHHhc-----------CCCCCceEEEEccCCCH------HHHHHHH
Confidence 3678999998 999999999532 222222221110 11234789999999987 5666554
Q ss_pred c-------CccEEEEcccccCc--------c---hhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEec-cccccCCc
Q psy7539 81 E-------TIHIVYHIAATVRF--------D---DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVST-AYCHPKEK 139 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~--------~---~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS-~~~~~~~~ 139 (318)
+ ++|++||+||.... + ..++..+++|+.|+..+.+++... .+-..+|+++| .+....
T Consensus 77 ~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~-- 154 (272)
T d1xkqa_ 77 NSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA-- 154 (272)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC--
T ss_pred HHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccC--
Confidence 3 68999999997421 1 135678899999998888876542 12235565555 333211
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
.| ....|+.||.+.+.+.+..+. +|+++..+.||.|-.+.
T Consensus 155 --------~~----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~ 198 (272)
T d1xkqa_ 155 --------QP----------------------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 198 (272)
T ss_dssp --------CC----------------------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred --------CC----------------------------CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchh
Confidence 01 016899999999988877664 68999999999773321
Q ss_pred CCCCCCcccCCCchHH---HHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPTG---LLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ....+.. -............| ..-+...+|+|.+++.++..+.+. ...++++.+.++
T Consensus 199 ~~-------~~~~~~~~~~~~~~~~~~~~~~~P-----lgR~g~pediA~~v~fL~S~~as~-~iTG~~i~vDGG 260 (272)
T d1xkqa_ 199 TN-------AMGMPDQASQKFYNFMASHKECIP-----IGAAGKPEHIANIILFLADRNLSF-YILGQSIVADGG 260 (272)
T ss_dssp HH-------HTTCCHHHHHHHHHHHHHCTTTCT-----TSSCBCHHHHHHHHHHHHCHHHHT-TCCSCEEEESTT
T ss_pred hh-------ccCCchHHHHHHHHHHHHHhcCCC-----CCCCcCHHHHHHHHHHHhCcchhC-CccCeEEEeCcC
Confidence 10 1111111 11111110000011 112667899999999888543210 014889999887
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.09 E-value=5e-09 Score=87.04 Aligned_cols=201 Identities=13% Similarity=0.087 Sum_probs=131.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+. +++.+.. .+...++.++.+|++++ +++++++
T Consensus 19 ~aia~~l~~~--G~~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~~Dls~~------~~i~~~~ 70 (241)
T d2a4ka1 19 RAALDLFARE--GASLVAVDREE------RLLAEAV--------------AALEAEAIAVVADVSDP------KAVEAVF 70 (241)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HTCCSSEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHH--------------HHcCCceEEEEecCCCH------HHHHHHH
Confidence 3678999998 99999999853 2233221 22345788999999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCcccccccC
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEKVLEEKTY 146 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~~~~E~~~ 146 (318)
+ ++|++||+|+.... ...++..+++|+.+...+.+++.....-+..|+++|.......
T Consensus 71 ~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~-------- 142 (241)
T d2a4ka1 71 AEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-------- 142 (241)
T ss_dssp HHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH--------
T ss_pred HHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc--------
Confidence 3 68999999997422 1345678999999999999987654333444544443321110
Q ss_pred CCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCc
Q psy7539 147 PPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
+. ...|+.+|.+.|.+.+..++ +|+++..+.||.+-.+..
T Consensus 143 -------------------------~~-----~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~------ 186 (241)
T d2a4ka1 143 -------------------------FG-----LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT------ 186 (241)
T ss_dssp -------------------------HH-----HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG------
T ss_pred -------------------------cC-----ccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH------
Confidence 00 06799999999999988866 579999999998733211
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.++ +......+.... ...-+...+|+|+++..++...... ..+.++.+.++
T Consensus 187 -~~~--~~~~~~~~~~~~---------p~~r~~~p~dva~~v~fL~S~~s~~--itG~~i~vDGG 237 (241)
T d2a4ka1 187 -AGL--PPWAWEQEVGAS---------PLGRAGRPEEVAQAALFLLSEESAY--ITGQALYVDGG 237 (241)
T ss_dssp -TTS--CHHHHHHHHHTS---------TTCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred -Hhh--hHhHHHHHHhCC---------CCCCCcCHHHHHHHHHHHhcchhCC--CcCceEEeCCC
Confidence 111 122223332211 0113567899999999988654421 24788888777
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=9.8e-10 Score=92.31 Aligned_cols=151 Identities=13% Similarity=0.124 Sum_probs=102.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|++..|+. +..+.+.+.++ . .....++.++.+|++++ ++++.+++
T Consensus 25 aiA~~la~~--G~~Vv~~~r~~---~~l~~~~~~l~--------~----~~~~~~~~~~~~Dls~~------~~v~~~v~ 81 (257)
T d1xg5a_ 25 AVARALVQQ--GLKVVGCARTV---GNIEELAAECK--------S----AGYPGTLIPYRCDLSNE------EDILSMFS 81 (257)
T ss_dssp HHHHHHHHT--TCEEEEEESCH---HHHHHHHHHHH--------H----TTCSSEEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCH---HHHHHHHHHHH--------h----cCCCceEEEEEccCCCH------HHHHHHHH
Confidence 688999998 99999999852 12222222111 0 11234788999999986 56665543
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hcC-CCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSK----QMI-HLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~~~~~v~~SS~~~~~~~~~~~ 142 (318)
++|++||+||.... ...++..+++|+.+...+.+++. +.. .-.++|++||.++....
T Consensus 82 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---- 157 (257)
T d1xg5a_ 82 AIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---- 157 (257)
T ss_dssp HHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC----
T ss_pred HHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC----
Confidence 68999999997521 24466789999998888766653 221 23589999997764321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEeccccc
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSII 211 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v 211 (318)
|.. ....|+.+|...+.+.+.++. +++++..+-||.+
T Consensus 158 ------p~~--------------------------~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i 200 (257)
T d1xg5a_ 158 ------PLS--------------------------VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV 200 (257)
T ss_dssp ------SCG--------------------------GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCB
T ss_pred ------CCc--------------------------ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCC
Confidence 000 005699999999988866542 5789999999866
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.06 E-value=7.2e-09 Score=87.08 Aligned_cols=212 Identities=11% Similarity=0.040 Sum_probs=132.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+... ..+..+++. .....++.++.+|++++ ++++.++
T Consensus 23 ~aia~~la~~--Ga~V~i~~r~~~~--~~~~~~~~~--------------~~~g~~~~~~~~Dv~~~------~~v~~~~ 78 (260)
T d1h5qa_ 23 LAFTRAVAAA--GANVAVIYRSAAD--AVEVTEKVG--------------KEFGVKTKAYQCDVSNT------DIVTKTI 78 (260)
T ss_dssp HHHHHHHHHT--TEEEEEEESSCTT--HHHHHHHHH--------------HHHTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHH--------------HHhCCceEEEEccCCCH------HHHHHHH
Confidence 3678999998 9999999997542 232222221 22245788999999987 5666555
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----CCCccEEEEeccccccCCcccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM----IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
+ .+|++||+||.... .+.++..+++|+.|+..+.+++... .....++.+||...........
T Consensus 79 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~ 158 (260)
T d1h5qa_ 79 QQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL 158 (260)
T ss_dssp HHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred HHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc
Confidence 3 68999999997421 2346678999999988887765431 2444666666655432211000
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
. ..| ....|+.+|.+.+.+.+..+. +|+++..+.||.+-.+...
T Consensus 159 ~---~~~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~- 206 (260)
T d1h5qa_ 159 N---GSL----------------------------TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA- 206 (260)
T ss_dssp T---EEC----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-
T ss_pred c---cCc----------------------------cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh-
Confidence 0 000 016899999999988877654 6899999999987432110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. +..+...+... .| ..-+...+|+|.+++.++...... ..++++.+.++
T Consensus 207 ------~~--~~~~~~~~~~~----~p-----l~R~g~pedvA~~v~fL~S~~s~~--itG~~i~VDGG 256 (260)
T d1h5qa_ 207 ------HM--DKKIRDHQASN----IP-----LNRFAQPEEMTGQAILLLSDHATY--MTGGEYFIDGG 256 (260)
T ss_dssp ------GS--CHHHHHHHHHT----CT-----TSSCBCGGGGHHHHHHHHSGGGTT--CCSCEEEECTT
T ss_pred ------cc--CHHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhcchhCC--CcCceEEECCC
Confidence 11 11222222221 11 112566789999998887654421 24888888877
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.06 E-value=4.9e-09 Score=87.90 Aligned_cols=204 Identities=13% Similarity=0.064 Sum_probs=128.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|++..|++. ..+..++. .....+..++.+|++++ ++++.+++
T Consensus 25 aiA~~la~~--Ga~V~i~~~~~~---~~~~~~~~---------------~~~~~~~~~~~~D~~~~------~~v~~~~~ 78 (256)
T d1ulua_ 25 AIAAKLKEA--GAEVALSYQAER---LRPEAEKL---------------AEALGGALLFRADVTQD------EELDALFA 78 (256)
T ss_dssp HHHHHHHHT--TCEEEEEESSGG---GHHHHHHH---------------HHHTTCCEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEeCcHH---HHHHHHHh---------------hhccCcccccccccCCH------HHHHHHHH
Confidence 678999998 999988777532 12222211 12234677899999986 56665543
Q ss_pred -------CccEEEEcccccC-------c----chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVR-------F----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~-------~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
++|++||+|+... + ...+...+++|+.++..+.+++... .+-.++|++||..+....
T Consensus 79 ~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~---- 154 (256)
T d1ulua_ 79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---- 154 (256)
T ss_dssp HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC----
T ss_pred HHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC----
Confidence 6899999998631 1 1234568899999999999887643 112479999997663321
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.||.+.+.+.+..+. +|+++..+.||.+......
T Consensus 155 ------~----------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~- 199 (256)
T d1ulua_ 155 ------P----------------------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAAR- 199 (256)
T ss_dssp ------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred ------C----------------------------CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeecccc-
Confidence 0 017899999999998877765 6899999999977543211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
...........+.+.. | ..-+...+|+|.++..++...... ..+.++.+.++
T Consensus 200 ------~~~~~~~~~~~~~~~~----p-----l~R~~~pedvA~~v~fL~S~~s~~--itG~~i~VDGG 251 (256)
T d1ulua_ 200 ------SIPGFTKMYDRVAQTA----P-----LRRNITQEEVGNLGLFLLSPLASG--ITGEVVYVDAG 251 (256)
T ss_dssp ----------CHHHHHHHHHHS----T-----TSSCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------chhhhHHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhCchhCC--ccCCeEEECcC
Confidence 1111112222222210 1 112567899999999888654431 24788888777
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.05 E-value=1.1e-09 Score=92.29 Aligned_cols=212 Identities=11% Similarity=0.011 Sum_probs=131.3
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|++..|++ +..+.+.+.+ .....++.++.+|++++ ++++.+++
T Consensus 20 aia~~la~~--Ga~V~~~~r~~---~~l~~~~~~~--------------~~~g~~~~~~~~Dv~~~------~~v~~~~~ 74 (260)
T d1zema1 20 ATALRLAEE--GTAIALLDMNR---EALEKAEASV--------------REKGVEARSYVCDVTSE------EAVIGTVD 74 (260)
T ss_dssp HHHHHHHHT--TCEEEEEESCH---HHHHHHHHHH--------------HTTTSCEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCH---HHHHHHHHHH--------------HhcCCcEEEEEccCCCH------HHHHHHHH
Confidence 678899998 99999999952 1222222221 22345788999999986 56665543
Q ss_pred -------CccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 82 -------TIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
.+|++||+||... + .+.++..+++|+.++..+.+++... .+--++|++||..+....
T Consensus 75 ~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~----- 149 (260)
T d1zema1 75 SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP----- 149 (260)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----
T ss_pred HHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC-----
Confidence 6899999999642 1 1345678999999998888876532 234589999997664321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
|. ...|+.||.+.+.+.+..+. +|+++..+.||.|-.+.....
T Consensus 150 -----~~----------------------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~ 196 (260)
T d1zema1 150 -----PN----------------------------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWER 196 (260)
T ss_dssp -----TT----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHH
T ss_pred -----cc----------------------------hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhc
Confidence 10 16899999999988877765 689999999997743210000
Q ss_pred -------CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 -------PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 -------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+.......+..+...+.... + ..-+...+|+|.+++.++...... -.+.++.+.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------P--l~R~g~pedvA~~v~fL~S~~s~~--itG~~i~VDGG 260 (260)
T d1zema1 197 QVELQAKVGSQYFSTDPKVVAQQMIGSV-------P--MRRYGDINEIPGVVAFLLGDDSSF--MTGVNLPIAGG 260 (260)
T ss_dssp HHHHHHHHTCTTSCSSHHHHHHHHHHTS-------T--TSSCBCGGGSHHHHHHHHSGGGTT--CCSCEEEESCC
T ss_pred chhhhhhhcccccccCHHHHHHHHHhcC-------C--CCCCcCHHHHHHHHHHHhCchhcC--ccCCeEEeCCC
Confidence 000000011112222222211 0 112456789999998888654431 24777777653
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=6.5e-10 Score=94.90 Aligned_cols=155 Identities=14% Similarity=0.084 Sum_probs=104.3
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |.+|+.+.+.....+..+++.+..+. + .....++.++.+|++++ +++..+.
T Consensus 16 ~a~A~~la~~--Ga~v~~v~~~~~~~~~~~~l~~~~~~-----~------~~~~~~~~~~~~Dv~~~------~~~~~~~ 76 (285)
T d1jtva_ 16 LHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARA-----L------ACPPGSLETLQLDVRDS------KSVAAAR 76 (285)
T ss_dssp HHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHH-----T------TCCTTSEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCCeEEEEEecCChhhhHHHHHHHHH-----H------hccCCceEEEeccccch------Hhhhhhh
Confidence 3678889888 76544444332222223333332210 0 22345899999999987 5677665
Q ss_pred c-----CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-----TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-----~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ .+|+++|+|+.... .+.++..+++|+.|+.++.+++... .+-.++|++||..+....
T Consensus 77 ~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~------- 149 (285)
T d1jtva_ 77 ERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL------- 149 (285)
T ss_dssp HTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-------
T ss_pred hhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCC-------
Confidence 4 58999999997421 2445678999999988888876431 244689999997764321
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccc
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIII 212 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~ 212 (318)
|. ...|+.||.+.+.+.+..+. +|+++.++.||.|-
T Consensus 150 ---~~----------------------------~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~ 189 (285)
T d1jtva_ 150 ---PF----------------------------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVH 189 (285)
T ss_dssp ---TT----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred ---CC----------------------------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCC
Confidence 10 16899999999988877654 68999999999873
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.03 E-value=3.4e-09 Score=89.83 Aligned_cols=215 Identities=12% Similarity=0.009 Sum_probs=129.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|+++ |++|++..|+.. ..+.+.+.+. .. .....++.++.+|++++ ++++.+++
T Consensus 19 aia~~la~~--Ga~V~~~~r~~~---~l~~~~~~i~--------~~---~~~~~~~~~~~~Dv~~~------~~v~~~~~ 76 (274)
T d1xhla_ 19 SAAVIFAKE--GAQVTITGRNED---RLEETKQQIL--------KA---GVPAEKINAVVADVTEA------SGQDDIIN 76 (274)
T ss_dssp HHHHHHHHT--TCEEEEEESCHH---HHHHHHHHHH--------HT---TCCGGGEEEEECCTTSH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCHH---HHHHHHHHHH--------Hc---CCCCcceEEEEeeCCCH------HHHHHHHH
Confidence 678999998 999999999532 1222221111 00 11234789999999987 56665543
Q ss_pred -------CccEEEEcccccC-----c----chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccc
Q psy7539 82 -------TIHIVYHIAATVR-----F----DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.+|++||+||... . .+.++..+++|+.|+..+.+++... .+-..++++||.......
T Consensus 77 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~---- 152 (274)
T d1xhla_ 77 TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH---- 152 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC----
T ss_pred HHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccC----
Confidence 6899999998631 1 1335678999999988888776542 234567777775542210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.+|.+.+.+.+..+. +|+++..+.||.|-.+....
T Consensus 153 ------~----------------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~ 198 (274)
T d1xhla_ 153 ------S----------------------------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGA 198 (274)
T ss_dssp ------T----------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHH
T ss_pred ------C----------------------------CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhh
Confidence 0 016899999999988876654 68999999999774321100
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhc-cCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNF-LSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~-~~~~~~~~~~~ni~~~ 287 (318)
. ........-............| ..-+...+|+|.+++.++..+ ... ..+.++.+.++
T Consensus 199 ~----~~~~~~~~~~~~~~~~~~~~iP-----lgR~g~pediA~~v~fL~S~d~s~~--itG~~i~vDGG 257 (274)
T d1xhla_ 199 M----GLPETASDKLYSFIGSRKECIP-----VGHCGKPEEIANIIVFLADRNLSSY--IIGQSIVADGG 257 (274)
T ss_dssp T----TCCHHHHHHHHHHHHHCTTTCT-----TSSCBCHHHHHHHHHHHHCHHHHTT--CCSCEEEESTT
T ss_pred h----cccchhhHHHHHHHHHHHcCCC-----CCCCcCHHHHHHHHHHHcCCccccC--ccCcEEEeCcC
Confidence 0 0000111111222111100011 112567899999999888532 210 14889999887
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.03 E-value=1.8e-09 Score=89.43 Aligned_cols=197 Identities=8% Similarity=-0.044 Sum_probs=126.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++ +.+++ ...+++.+|+++. .+.+.+-+
T Consensus 18 ~aia~~l~~~--Ga~V~~~~r~~------~~l~~--------------------~~~~~~~~Dv~~~-----~~~~~~~~ 64 (234)
T d1o5ia_ 18 RAVADVLSQE--GAEVTICARNE------ELLKR--------------------SGHRYVVCDLRKD-----LDLLFEKV 64 (234)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHH--------------------TCSEEEECCTTTC-----HHHHHHHS
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHh--------------------cCCcEEEcchHHH-----HHHHHHHh
Confidence 3678899998 99999999952 22221 2345778999864 23444445
Q ss_pred cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCCCCC
Q psy7539 81 ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYPPPV 150 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~ 150 (318)
.++|++||+||.... ...++..+++|+.++..+.+++... .+-.++|++||........
T Consensus 65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~----------- 133 (234)
T d1o5ia_ 65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE----------- 133 (234)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------
T ss_pred CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccc-----------
Confidence 689999999996422 2345678899999988887766432 2445899999976533210
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccCC
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNI 226 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~ 226 (318)
....|+.+|.+.+.+.+..+. +|+++..+.||.+-.+.. ...
T Consensus 134 ---------------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~-------~~~ 179 (234)
T d1o5ia_ 134 ---------------------------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERV-------KEL 179 (234)
T ss_dssp ---------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTH-------HHH
T ss_pred ---------------------------ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhh-------hhh
Confidence 016899999999988877654 689999999997733210 011
Q ss_pred CchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 227 NGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. ......+... . ...-+...+|+|.++..++...... ..++++.+.++
T Consensus 180 ~~-~~~~~~~~~~-~--------pl~R~~~pediA~~v~fL~S~~s~~--itG~~i~vDGG 228 (234)
T d1o5ia_ 180 LS-EEKKKQVESQ-I--------PMRRMAKPEEIASVVAFLCSEKASY--LTGQTIVVDGG 228 (234)
T ss_dssp SC-HHHHHHHHTT-S--------TTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred cC-HHHHHHHHhc-C--------CCCCCcCHHHHHHHHHHHhChhhcC--CcCcEEEECcc
Confidence 11 1111111111 0 1123678999999999887654431 24788888777
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.03 E-value=2.2e-09 Score=91.05 Aligned_cols=210 Identities=15% Similarity=0.104 Sum_probs=127.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+. +++.+.. .+...++..+.+|++++ ++++.++
T Consensus 19 ~aia~~la~~--Ga~V~i~~r~~------~~l~~~~--------------~~~~~~~~~~~~Dv~~~------~~~~~~~ 70 (276)
T d1bdba_ 19 RALVDRFVAE--GAKVAVLDKSA------ERLAELE--------------TDHGDNVLGIVGDVRSL------EDQKQAA 70 (276)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHH--------------HHHGGGEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHH--------------HHcCCCeeEEecccccH------HHHHHHH
Confidence 3678999998 99999999852 3343321 22345788999999986 4555554
Q ss_pred c-------CccEEEEcccccCcc------------hhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCc
Q psy7539 81 E-------TIHIVYHIAATVRFD------------DYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~~------------~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~ 139 (318)
+ .+|++||+||..... ..++..+++|+.|+..+.+++... ++-.++|++||..+....
T Consensus 71 ~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~- 149 (276)
T d1bdba_ 71 SRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPN- 149 (276)
T ss_dssp HHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTT-
T ss_pred HHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCC-
Confidence 3 789999999963211 136678999999988888776432 122578888886553210
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh---cCCcEEEecccccccccC
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME---AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~ilR~~~v~G~~~ 216 (318)
| ....|+.||.+.+.+.+..+. .++++..+.||.|-.+..
T Consensus 150 ---------~----------------------------~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~ 192 (276)
T d1bdba_ 150 ---------G----------------------------GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLR 192 (276)
T ss_dssp ---------S----------------------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCC
T ss_pred ---------C----------------------------CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcC
Confidence 1 016799999999998887765 458999999998744321
Q ss_pred CCCCC-cccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhh-ccCCCCCCCcEEEeeCC
Q psy7539 217 DPLPG-WTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWN-FLSNPGNTMRVINLTAN 287 (318)
Q Consensus 217 ~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~-~~~~~~~~~~~~ni~~~ 287 (318)
.+... +...... ..-+........ | .-=+...+|+|.+++.++.. .... ..+.++++.++
T Consensus 193 ~~~~~~~~~~~~~-~~~~~~~~~~~~---P-----lgR~g~peeva~~v~fL~S~~~a~~--itG~~i~VDGG 254 (276)
T d1bdba_ 193 GPSSLGMGSKAIS-TVPLADMLKSVL---P-----IGRMPEVEEYTGAYVFFATRGDAAP--ATGALLNYDGG 254 (276)
T ss_dssp CCGGGC----------CHHHHHTTTC---T-----TSSCCCGGGGSHHHHHHHCHHHHTT--CSSCEEEESSS
T ss_pred CccchhhhhhccC-cHHHHHHHHhcC---C-----CCCCcCHHHHHHHHHHHcCCcccCC--eeCcEEEECcC
Confidence 11100 0000000 001111111111 0 11245578899988877643 2211 14889998776
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.02 E-value=3.3e-09 Score=88.78 Aligned_cols=205 Identities=9% Similarity=-0.047 Sum_probs=124.9
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
.++++|+++ |++|++..|+.... +.++... -.+..+|+++.. +.++++
T Consensus 15 aiA~~la~~--Ga~V~i~~r~~~~~---~~~~~~~--------------------~~~~~~dv~~~~------~~~~~~~ 63 (252)
T d1zmta1 15 GSALRLSEA--GHTVACHDESFKQK---DELEAFA--------------------ETYPQLKPMSEQ------EPAELIE 63 (252)
T ss_dssp HHHHHHHHT--TCEEEECCGGGGSH---HHHHHHH--------------------HHCTTSEECCCC------SHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCHHHH---HHHHhhh--------------------CcEEEeccCCHH------HHHHHHH
Confidence 578899988 99999999864432 2232211 012356776652 233322
Q ss_pred ------cCccEEEEccccc-Cc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCccccc
Q psy7539 81 ------ETIHIVYHIAATV-RF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEE 143 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~-~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E 143 (318)
.++|++||+||.. .. .+.++..+++|+.++..+.+++... .+--++|++||..+....
T Consensus 64 ~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~----- 138 (252)
T d1zmta1 64 AVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW----- 138 (252)
T ss_dssp HHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----
T ss_pred HHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc-----
Confidence 3799999999863 11 1345678899999988888766432 234589999997764321
Q ss_pred ccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC
Q psy7539 144 KTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL 219 (318)
Q Consensus 144 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~ 219 (318)
| ....|+.||...+.+.+..+. +|+++..+.||.+-.+.....
T Consensus 139 -----~----------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~ 185 (252)
T d1zmta1 139 -----K----------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYF 185 (252)
T ss_dssp -----T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSS
T ss_pred -----c----------------------------cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhh
Confidence 0 016899999999988877755 689999999998855332111
Q ss_pred CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.. .............+.+. .+ -+ =+...+|+|.+++.++...... ..++++.+.++
T Consensus 186 ~~-~~~~~~~~e~~~~~~~~----~p---l~--R~g~pedvA~~v~fL~S~~s~~--iTG~~i~vdGG 241 (252)
T d1zmta1 186 YP-TEPWKTNPEHVAHVKKV----TA---LQ--RLGTQKELGELVAFLASGSCDY--LTGQVFWLAGG 241 (252)
T ss_dssp CB-HHHHTTCHHHHHHHHHH----SS---SS--SCBCHHHHHHHHHHHHTTSCGG--GTTCEEEESTT
T ss_pred hh-cccccCCHHHHHHHHhc----CC---CC--CCcCHHHHHHHHHHHhCchhcC--CcCCeEEECCC
Confidence 00 00000001122222221 01 01 2567899999999888654321 14788998877
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.97 E-value=6e-09 Score=87.50 Aligned_cols=153 Identities=14% Similarity=0.041 Sum_probs=103.7
Q ss_pred hhHHHHHhh-CCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRT-CENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~-~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
+++++|.+. ..|++|++..|+.+ ..+.+.+.+. . .....++.++.+|++++ ++++.++
T Consensus 21 aiA~~lA~~~~~G~~Vv~~~r~~~---~l~~~~~~l~--------~----~~~~~~~~~~~~Dvs~~------~~v~~l~ 79 (259)
T d1oaaa_ 21 ALAPQLARLLSPGSVMLVSARSES---MLRQLKEELG--------A----QQPDLKVVLAAADLGTE------AGVQRLL 79 (259)
T ss_dssp HHHHHHHTTBCTTCEEEEEESCHH---HHHHHHHHHH--------H----HCTTSEEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHhcccCCCEEEEEECCHH---HHHHHHHHHH--------h----hcCCceEEEEEccCCCH------HHHHHHH
Confidence 567777641 13899999999532 1222221111 0 11234788999999986 5666554
Q ss_pred c-----------CccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhcC-C----CccEEEEecccc
Q psy7539 81 E-----------TIHIVYHIAATVRF----------DDYMQTYVFLNTRGTRDMLNLSKQMI-H----LQLFVYVSTAYC 134 (318)
Q Consensus 81 ~-----------~~d~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~----~~~~v~~SS~~~ 134 (318)
+ ..|+++|+||.... ...++..+++|+.|+..+.+++...- . ..++|++||..+
T Consensus 80 ~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~ 159 (259)
T d1oaaa_ 80 SAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA 159 (259)
T ss_dssp HHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred HHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccc
Confidence 2 45799999986311 13466789999999999999887531 1 237899999766
Q ss_pred ccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh--cCCcEEEecccccc
Q psy7539 135 HPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME--AGMPCMILRPSIII 212 (318)
Q Consensus 135 ~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~ilR~~~v~ 212 (318)
.... | ....|+.||...+.+.+.++. +|+++..+.||.|-
T Consensus 160 ~~~~----------~----------------------------~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~ 201 (259)
T d1oaaa_ 160 LQPY----------K----------------------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp TSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred cCCC----------c----------------------------cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCC
Confidence 4321 1 017899999999999988876 78999999999774
Q ss_pred c
Q psy7539 213 P 213 (318)
Q Consensus 213 G 213 (318)
.
T Consensus 202 T 202 (259)
T d1oaaa_ 202 N 202 (259)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.94 E-value=1.8e-09 Score=92.70 Aligned_cols=214 Identities=12% Similarity=0.070 Sum_probs=129.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCC---CHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNK---NSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQ 77 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~---~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~ 77 (318)
++++++|+++ |++|++..|+.+.. ...+.+.+.. .+...+...+.+|+.+. +..+
T Consensus 21 ~aiA~~la~~--Ga~Vvi~d~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~d~~~~------~~~~ 78 (302)
T d1gz6a_ 21 RAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVV--------------EEIRRRGGKAVANYDSV------EAGE 78 (302)
T ss_dssp HHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHH--------------HHHHHTTCEEEEECCCG------GGHH
T ss_pred HHHHHHHHHc--CCEEEEEeCCchhhhhhhhHHHHHHHH--------------HHHhhcccccccccchH------HHHH
Confidence 3678899998 99999988864321 1112222211 11122334456666654 2333
Q ss_pred HHh-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcc
Q psy7539 78 MLS-------ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKV 140 (318)
Q Consensus 78 ~~~-------~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~ 140 (318)
.++ .++|++||+||.... ...++..+++|+.|+..+.+++... .+--++|++||..+....
T Consensus 79 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~-- 156 (302)
T d1gz6a_ 79 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN-- 156 (302)
T ss_dssp HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC--
T ss_pred HHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC--
Confidence 322 279999999997522 2346679999999999888876532 234589999997653210
Q ss_pred cccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccC
Q psy7539 141 LEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWK 216 (318)
Q Consensus 141 ~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~ 216 (318)
| ....|+.||...+.+.+..+. +|+++..+.||.+-....
T Consensus 157 --------~----------------------------~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~ 200 (302)
T d1gz6a_ 157 --------F----------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE 200 (302)
T ss_dssp --------T----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG
T ss_pred --------C----------------------------CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh
Confidence 0 017899999999988877655 689999999986511100
Q ss_pred CCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC---------
Q psy7539 217 DPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN--------- 287 (318)
Q Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~--------- 287 (318)
... +..+ ..+...+|+|.+++.++..... ..++++.+.++
T Consensus 201 --------~~~-~~~~-------------------~~~~~PedvA~~v~fL~S~~a~---itG~~i~vdGG~~~~~~~~~ 249 (302)
T d1gz6a_ 201 --------TVM-PEDL-------------------VEALKPEYVAPLVLWLCHESCE---ENGGLFEVGAGWIGKLRWER 249 (302)
T ss_dssp --------GGS-CHHH-------------------HHHSCGGGTHHHHHHHTSTTCC---CCSCEEEEETTEEEEEEEEE
T ss_pred --------hcC-cHhh-------------------HhcCCHHHHHHHHHHHcCCCcC---CCCcEEEeCCCceeEEEEee
Confidence 000 1111 1122347899999887753221 24566655332
Q ss_pred --------CCCceeHHHHHHHHHHhh
Q psy7539 288 --------KDFQITWYDIIENGKDIA 305 (318)
Q Consensus 288 --------~~~~~~~~el~~~i~~~~ 305 (318)
.+.+.|..++.+.+.+..
T Consensus 250 ~~g~~~~~~~~~~t~e~i~~~~~~i~ 275 (302)
T d1gz6a_ 250 TLGAIVRKRNQPMTPEAVRDNWVKIC 275 (302)
T ss_dssp CCCEECCBTTBCCCHHHHHHTHHHHT
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHh
Confidence 114567778887777655
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.94 E-value=4e-08 Score=82.36 Aligned_cols=215 Identities=13% Similarity=0.041 Sum_probs=132.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.. ...+.+.+.+ .....++.++.+|+++. ++...++
T Consensus 20 ~aia~~la~~--G~~Vvi~~~~~~--~~~~~~~~~~--------------~~~g~~~~~~~~D~~~~------~~v~~~~ 75 (259)
T d1ja9a_ 20 RGIAIELGRR--GASVVVNYGSSS--KAAEEVVAEL--------------KKLGAQGVAIQADISKP------SEVVALF 75 (259)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHH--------------HHTTCCEEEEECCTTSH------HHHHHHH
T ss_pred HHHHHHHHHc--CCEEEEEcCCCh--HHHHHHHHHH--------------HHcCCCceEecCCCCCH------HHHHHHH
Confidence 3688999998 999988777432 2223333221 22345788999999976 4565544
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ ++|++||+||.... .+.++..+++|+.+...+++++... .+-.++++++|..+...
T Consensus 76 ~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~-------- 147 (259)
T d1ja9a_ 76 DKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT-------- 147 (259)
T ss_dssp HHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC--------
T ss_pred HHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc--------
Confidence 3 68999999997521 2445678999999999998888653 12246677766443211
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCC--
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPL-- 219 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~-- 219 (318)
+.| ....|+.+|.+.+.+.+..+. +|+++..+.||.+-.+.....
T Consensus 148 -~~~----------------------------~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~ 198 (259)
T d1ja9a_ 148 -GIP----------------------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSW 198 (259)
T ss_dssp -SCC----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGG
T ss_pred -CCC----------------------------CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhh
Confidence 001 116899999999988877665 689999999998743210000
Q ss_pred --CCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 220 --PGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 220 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.........+..+...+.... ...-+...+|+|+++..++...... -.+.++.+.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~---------pl~R~g~p~eVa~~v~fL~S~~a~~--itG~~i~vDGG 257 (259)
T d1ja9a_ 199 HYAPGGYKGMPQEKIDEGLANMN---------PLKRIGYPADIGRAVSALCQEESEW--INGQVIKLTGG 257 (259)
T ss_dssp GTSTTCCTTCCHHHHHHHHHHTS---------TTSSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred hhhhhhcccCCHHHHHHHHHhCC---------CCCCCcCHHHHHHHHHHHhCchhcC--CcCceEEeCCC
Confidence 000000001111222222211 1123678999999999988765531 24788888776
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.93 E-value=1.3e-08 Score=84.76 Aligned_cols=151 Identities=11% Similarity=0.127 Sum_probs=100.6
Q ss_pred hhHHHHHhh-CCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 2 VLLEKILRT-CENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 2 ~l~~~Ll~~-~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++.|++. ..|++|++..|+.+..+ .+.+. .....++.++.+|++++ ++++.++
T Consensus 17 a~a~~l~~~a~~g~~V~~~~r~~~~~~---~~~~~---------------~~~~~~~~~~~~Dvs~~------~~v~~~~ 72 (248)
T d1snya_ 17 GLVKALLNLPQPPQHLFTTCRNREQAK---ELEDL---------------AKNHSNIHILEIDLRNF------DAYDKLV 72 (248)
T ss_dssp HHHHHHHTSSSCCSEEEEEESCTTSCH---HHHHH---------------HHHCTTEEEEECCTTCG------GGHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEECCHHHHH---HHHHH---------------HhcCCcEEEEEEEeccH------HHHHHHH
Confidence 567888741 14889999999865442 22222 12235899999999987 3444332
Q ss_pred ---------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc--------------CCCccEEEE
Q psy7539 81 ---------ETIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM--------------IHLQLFVYV 129 (318)
Q Consensus 81 ---------~~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--------------~~~~~~v~~ 129 (318)
..+|++||+||.... ...++..+++|+.|+..+.+++... .+..++|++
T Consensus 73 ~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i 152 (248)
T d1snya_ 73 ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM 152 (248)
T ss_dssp HHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred hhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccc
Confidence 258999999997421 1235568999999988887765421 123578999
Q ss_pred eccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEE
Q psy7539 130 STAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMI 205 (318)
Q Consensus 130 SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~i 205 (318)
||..+..... +.| ....|+.||.+...+.+..+. +|+.+..
T Consensus 153 ~S~~g~~~~~-------~~~----------------------------~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~ 197 (248)
T d1snya_ 153 SSILGSIQGN-------TDG----------------------------GMYAYRTSKSALNAATKSLSVDLYPQRIMCVS 197 (248)
T ss_dssp CCGGGCSTTC-------CSC----------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred cccccccCCC-------CCC----------------------------ChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9966532110 000 015799999999988877654 6899999
Q ss_pred eccccc
Q psy7539 206 LRPSII 211 (318)
Q Consensus 206 lR~~~v 211 (318)
+.||.|
T Consensus 198 v~PG~v 203 (248)
T d1snya_ 198 LHPGWV 203 (248)
T ss_dssp ECCCSB
T ss_pred cCCCcc
Confidence 999977
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.92 E-value=4.5e-08 Score=82.62 Aligned_cols=216 Identities=14% Similarity=0.024 Sum_probs=132.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|+.. +..+.+.+.+ .....++.++.+|++++ +++..++
T Consensus 32 ~aia~~la~~--Ga~Vvi~~~~~~--~~~~~~~~~~--------------~~~g~~~~~~~~D~~~~------~~v~~~~ 87 (272)
T d1g0oa_ 32 REMAMELGRR--GCKVIVNYANST--ESAEEVVAAI--------------KKNGSDAACVKANVGVV------EDIVRMF 87 (272)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHH--------------HHTTCCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHc--CCEEEEEeCCch--HHHHHHHHHH--------------HhhCCceeeEeCCCCCH------HHHHHHH
Confidence 3678999998 999998888532 1222222211 22345788999999986 5666554
Q ss_pred c-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCccccccc
Q psy7539 81 E-------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKT 145 (318)
Q Consensus 81 ~-------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~ 145 (318)
+ ++|+++|+|+.... ...+...+++|+.++..+++++... ..-.++++++|.......
T Consensus 88 ~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~------- 160 (272)
T d1g0oa_ 88 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA------- 160 (272)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS-------
T ss_pred HHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccc-------
Confidence 3 68999999997522 2345678999999999999988753 223477888775542210
Q ss_pred CCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCC-
Q psy7539 146 YPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLP- 220 (318)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~- 220 (318)
.+ ....|+.+|.+.+.+.+..+. +|+++..+.||.+-.+......
T Consensus 161 --~~----------------------------~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~ 210 (272)
T d1g0oa_ 161 --VP----------------------------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCR 210 (272)
T ss_dssp --CS----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGG
T ss_pred --cc----------------------------chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHH
Confidence 00 116799999999988877654 6899999999977432100000
Q ss_pred Ccc--cCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 221 GWT--DNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 221 g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.+. ................. .+ .--+...+|+|.++..++...... -.+.++.+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~------~P--lgR~~~peevA~~v~fL~s~~s~~--itG~~i~vDGG 269 (272)
T d1g0oa_ 211 EYIPNGENLSNEEVDEYAAVQW------SP--LRRVGLPIDIARVVCFLASNDGGW--VTGKVIGIDGG 269 (272)
T ss_dssp GGSTTCTTCCHHHHHHHHHHHS------CT--TCSCBCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred hhhhcccccchHHHHHHHHHcc------CC--CCCCcCHHHHHHHHHHHhCchhcC--ccCceEeECCC
Confidence 000 00001111111111100 01 113677899999999988654431 24788888776
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.91 E-value=1.4e-08 Score=84.67 Aligned_cols=153 Identities=10% Similarity=0.051 Sum_probs=97.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|++++..+.|++..|+.... +.+. .....+++++.+|+++. ++++.+.+
T Consensus 18 a~a~~la~~G~~~~Vi~~~R~~~~~---~~l~-----------------~~~~~~~~~~~~Dvs~~------~~v~~~~~ 71 (250)
T d1yo6a1 18 GLVQQLVKDKNIRHIIATARDVEKA---TELK-----------------SIKDSRVHVLPLTVTCD------KSLDTFVS 71 (250)
T ss_dssp HHHHHHHTCTTCCEEEEEESSGGGC---HHHH-----------------TCCCTTEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEEeCCHHHH---HHHH-----------------HhhCCceEEEEEecCCH------HHHHHHHH
Confidence 6789999881124888888864322 1111 22345899999999986 45554432
Q ss_pred ---------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc------C--------CCccEEEEe
Q psy7539 82 ---------TIHIVYHIAATVRF--------DDYMQTYVFLNTRGTRDMLNLSKQM------I--------HLQLFVYVS 130 (318)
Q Consensus 82 ---------~~d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~------~--------~~~~~v~~S 130 (318)
++|++||+||.... ...++..+++|+.|+..+.+++... + ....++.+|
T Consensus 72 ~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s 151 (250)
T d1yo6a1 72 KVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITIS 151 (250)
T ss_dssp HHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEEC
T ss_pred HHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccc
Confidence 38999999997421 1235678999999998888776421 0 113566777
Q ss_pred ccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEe
Q psy7539 131 TAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMIL 206 (318)
Q Consensus 131 S~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~il 206 (318)
+........ ... ....| ...|+.||.+...+.+..+. .|+.+..+
T Consensus 152 ~~~~~~~~~-~~~-~~~~~-----------------------------~~aY~aSKaal~~l~~~la~el~~~gI~v~~i 200 (250)
T d1yo6a1 152 SGLGSITDN-TSG-SAQFP-----------------------------VLAYRMSKAAINMFGRTLAVDLKDDNVLVVNF 200 (250)
T ss_dssp CGGGCSTTC-CST-TSSSC-----------------------------BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEE
T ss_pred cccccccCC-ccc-ccchh-----------------------------HHHHHHHHHHHHHHHHHHHHHhcccCeEEEEE
Confidence 644322110 000 00011 14699999999988877665 57999999
Q ss_pred ccccc
Q psy7539 207 RPSII 211 (318)
Q Consensus 207 R~~~v 211 (318)
.||.|
T Consensus 201 ~PG~v 205 (250)
T d1yo6a1 201 CPGWV 205 (250)
T ss_dssp ECCCC
T ss_pred ecCCC
Confidence 99966
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=1.7e-08 Score=83.87 Aligned_cols=205 Identities=13% Similarity=0.081 Sum_probs=130.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
+++++|+++ |++|++..|++ +++++. .....+++...|+... +..+...
T Consensus 21 aia~~la~~--G~~Vi~~~r~~------~~l~~~----------------~~~~~~~~~~~d~~~~------~~~~~~~~ 70 (245)
T d2ag5a1 21 AAALAFARE--GAKVIATDINE------SKLQEL----------------EKYPGIQTRVLDVTKK------KQIDQFAN 70 (245)
T ss_dssp HHHHHHHHT--TCEEEEEESCH------HHHGGG----------------GGSTTEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHc--CCEEEEEeCCH------HHHHHH----------------HhccCCceeeeecccc------cccccccc
Confidence 578999998 99999999952 223221 1123577788887653 3334333
Q ss_pred --cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEeccccccCCcccccccCCC
Q psy7539 81 --ETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHPKEKVLEEKTYPP 148 (318)
Q Consensus 81 --~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~~~~~~~E~~~~~ 148 (318)
.++|++||+||.... .+.++..+++|+.++..+.+++... .+..++|++||....-.
T Consensus 71 ~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~----------- 139 (245)
T d2ag5a1 71 EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK----------- 139 (245)
T ss_dssp HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB-----------
T ss_pred ccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccC-----------
Confidence 489999999998532 2346678999999999988876542 23458999998654210
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCccc
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTD 224 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~ 224 (318)
+. .....|+.+|.+.+.+.+..+. +|+++..+.||.+-.+.... +..
T Consensus 140 ~~--------------------------~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~---~~~ 190 (245)
T d2ag5a1 140 GV--------------------------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE---RIQ 190 (245)
T ss_dssp CC--------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH---HHH
T ss_pred Cc--------------------------cchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHh---hhh
Confidence 00 0116899999999998887765 68999999999774321100 000
Q ss_pred CCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 225 NINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
....+......+.... ...-+...+|+|.++..++...... ..+.++.+.++
T Consensus 191 ~~~~~~~~~~~~~~~~---------pl~R~~~pedva~~v~fL~s~~s~~--iTG~~i~VDGG 242 (245)
T d2ag5a1 191 ARGNPEEARNDFLKRQ---------KTGRFATAEEIAMLCVYLASDESAY--VTGNPVIIDGG 242 (245)
T ss_dssp HSSSHHHHHHHHHHTC---------TTSSCEEHHHHHHHHHHHHSGGGTT--CCSCEEEECTT
T ss_pred hhhhhHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhChhhCC--CcCceEEeCCC
Confidence 0011112222222210 1123667899999999988754431 24888988877
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.85 E-value=2.6e-08 Score=84.27 Aligned_cols=109 Identities=16% Similarity=0.030 Sum_probs=74.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
+++++|++. .+.+|++..|+.. ++++..+ .+ .....+++++.+|+++. ++.+++++
T Consensus 18 a~A~~la~~-~g~~Vi~~~r~~~------~~~~~~~-----~l------~~~~~~~~~~~~Dvs~~------~sv~~~~~ 73 (275)
T d1wmaa1 18 AIVRDLCRL-FSGDVVLTARDVT------RGQAAVQ-----QL------QAEGLSPRFHQLDIDDL------QSIRALRD 73 (275)
T ss_dssp HHHHHHHHH-SSSEEEEEESSHH------HHHHHHH-----HH------HHTTCCCEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHh-CCCEEEEEECCHH------HHHHHHH-----HH------HhcCCcEEEEEEecCCH------HHHHHHHH
Confidence 578888876 4679999999632 2222111 11 22235788999999986 45554432
Q ss_pred -------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEecccc
Q psy7539 82 -------TIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYC 134 (318)
Q Consensus 82 -------~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~ 134 (318)
.+|++||+||.... ...++..+++|+.|+..+.+++... ..-.++|++||..+
T Consensus 74 ~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~ 141 (275)
T d1wmaa1 74 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS 141 (275)
T ss_dssp HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred HHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccce
Confidence 68999999997521 2335568999999999999988753 11248999999654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.82 E-value=2.1e-07 Score=79.28 Aligned_cols=208 Identities=19% Similarity=0.092 Sum_probs=126.7
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|++. |++|++..|++.. ..+..+++ . .....++.++.+|+++. +.++.++
T Consensus 39 ~aiA~~la~~--Ga~Vii~~r~~~~--l~~~~~~l---------~-----~~~g~~~~~~~~D~~~~------~~v~~~~ 94 (294)
T d1w6ua_ 39 KGMTTLLSSL--GAQCVIASRKMDV--LKATAEQI---------S-----SQTGNKVHAIQCDVRDP------DMVQNTV 94 (294)
T ss_dssp HHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHH---------H-----HHHSSCEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHc--CCEEEEEECCHHH--HHHHHHHH---------H-----HhcCCceEEEEecccCh------HHHHHHh
Confidence 3688999998 9999999996321 11111111 0 22345788999999986 4555433
Q ss_pred -------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHH----hcCCCccEEEEeccccccCCcccc
Q psy7539 81 -------ETIHIVYHIAATVRFD-------DYMQTYVFLNTRGTRDMLNLSK----QMIHLQLFVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 -------~~~d~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~v~~SS~~~~~~~~~~~ 142 (318)
.++|++||+||..... ......+.+|+.+...+...+. .......++.+||.+.....
T Consensus 95 ~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~---- 170 (294)
T d1w6ua_ 95 SELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS---- 170 (294)
T ss_dssp HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----
T ss_pred hhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc----
Confidence 2789999999974221 2344567778777666654432 22244466777776543211
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
| ....|+.+|.+.+.+.+..+. +|+++..+.||.|-.+....
T Consensus 171 ------~----------------------------~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~ 216 (294)
T d1w6ua_ 171 ------G----------------------------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS 216 (294)
T ss_dssp ------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred ------c----------------------------ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhh
Confidence 0 116799999999999887765 68999999999885432110
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
................ + ..-+...+|+|.++..++...... ..+.++.+.++
T Consensus 217 ------~~~~~~~~~~~~~~~~----p-----l~R~~~pediA~~v~fL~sd~s~~--itG~~i~vDGG 268 (294)
T d1w6ua_ 217 ------RLDPTGTFEKEMIGRI----P-----CGRLGTVEELANLAAFLCSDYASW--INGAVIKFDGG 268 (294)
T ss_dssp -------CCTTSHHHHHHHTTC----T-----TSSCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred ------ccCCcHHHHHHHhhcC----C-----CCCCCCHHHHHHHHHHHhCchhcC--CCCcEEEECCC
Confidence 1111112222222211 0 113556899999999988654421 24889998877
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.78 E-value=7.1e-08 Score=79.55 Aligned_cols=191 Identities=10% Similarity=0.076 Sum_probs=114.4
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCC-CCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDL-GISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~-gl~~~~~~~~ 79 (318)
++++++|+++ |++|+++.|++.... .....+.+|.....- ....+.....
T Consensus 16 ~aia~~l~~~--G~~V~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (235)
T d1ooea_ 16 SAILEFFKKN--GYTVLNIDLSANDQA---------------------------DSNILVDGNKNWTEQEQSILEQTASS 66 (235)
T ss_dssp HHHHHHHHHT--TEEEEEEESSCCTTS---------------------------SEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCchhcc---------------------------cccceeccccCchhHHHHHHHHHHHH
Confidence 3688999998 999999999754321 122334555443210 0000111122
Q ss_pred h--cCccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCC
Q psy7539 80 S--ETIHIVYHIAATVR----F----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPP 148 (318)
Q Consensus 80 ~--~~~d~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~ 148 (318)
+ .++|++||+||... . .+.++..+++|+.++..+.+++... ..-.++|++||..+....
T Consensus 67 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~---------- 136 (235)
T d1ooea_ 67 LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT---------- 136 (235)
T ss_dssp HTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----------
T ss_pred hcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc----------
Confidence 2 25899999999521 1 1234457899999999988887653 122489999997654321
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEecccccccccCCCCCCc
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
| ....|+.||.+.+.+.+..+. .++++..+.||.+-.
T Consensus 137 ~----------------------------~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T--------- 179 (235)
T d1ooea_ 137 P----------------------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDT--------- 179 (235)
T ss_dssp T----------------------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCC---------
T ss_pred c----------------------------cccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcC---------
Confidence 1 017899999999999988764 245677788885511
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEee
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 285 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~ 285 (318)
.+....... .....+++.+++++.++..+...... ...+..+.+.
T Consensus 180 --------~~~~~~~~~---------~~~~~~~~~~~va~~~~~~l~~~~~~-~~tG~~i~v~ 224 (235)
T d1ooea_ 180 --------PMNRKWMPN---------ADHSSWTPLSFISEHLLKWTTETSSR-PSSGALLKIT 224 (235)
T ss_dssp --------HHHHHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGGGC-CCTTCEEEEE
T ss_pred --------cchhhhCcC---------CccccCCCHHHHHHHHHHHhcCcccc-CCCceEEEEE
Confidence 112222111 12345788999999987655543321 1136666663
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.72 E-value=1.3e-07 Score=78.43 Aligned_cols=146 Identities=13% Similarity=0.129 Sum_probs=99.4
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH--
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML-- 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~-- 79 (318)
+++++|+++ |++|++..|+.+. ..+ +. .+...+......|+.+. +..+..
T Consensus 20 aia~~la~~--G~~V~~~~r~~~~--~~~-~~-----------------~~l~~~~~~~~~~~~~~------~~~~~~~~ 71 (248)
T d2o23a1 20 ATAERLVGQ--GASAVLLDLPNSG--GEA-QA-----------------KKLGNNCVFAPADVTSE------KDVQTALA 71 (248)
T ss_dssp HHHHHHHHT--TCEEEEEECTTSS--HHH-HH-----------------HHHCTTEEEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEeCChHH--HHH-HH-----------------HHhCCCccccccccccc------cccccccc
Confidence 678999998 9999999996432 222 11 22234667777787654 222222
Q ss_pred -----hcCccEEEEcccccC-------------cchhHHHHHHHhHHHHHHHHHHHHhc---------CCCccEEEEecc
Q psy7539 80 -----SETIHIVYHIAATVR-------------FDDYMQTYVFLNTRGTRDMLNLSKQM---------IHLQLFVYVSTA 132 (318)
Q Consensus 80 -----~~~~d~Vih~Aa~~~-------------~~~~~~~~~~~Nv~gt~~ll~~a~~~---------~~~~~~v~~SS~ 132 (318)
....|.++++++... ..+.++..+++|+.++..+.+++... .+--++|++||.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~ 151 (248)
T d2o23a1 72 LAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV 151 (248)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred ccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecch
Confidence 236788888876521 11346678999999999999887542 012369999998
Q ss_pred ccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecc
Q psy7539 133 YCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRP 208 (318)
Q Consensus 133 ~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~ 208 (318)
++.... | ....|+.||.+.+.+.+.++. +|+++..+.|
T Consensus 152 ~~~~~~----------~----------------------------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~P 193 (248)
T d2o23a1 152 AAFEGQ----------V----------------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP 193 (248)
T ss_dssp HHHHCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred hhccCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeecc
Confidence 764321 0 016899999999999888765 6899999999
Q ss_pred ccccc
Q psy7539 209 SIIIP 213 (318)
Q Consensus 209 ~~v~G 213 (318)
|.+-.
T Consensus 194 G~i~T 198 (248)
T d2o23a1 194 GLFGT 198 (248)
T ss_dssp CCBCC
T ss_pred Cceec
Confidence 97743
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.71 E-value=7.3e-07 Score=74.22 Aligned_cols=204 Identities=13% Similarity=0.075 Sum_probs=127.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
++++.|+++ |++|++..|++. ..+++.+.. ....+...+..|+.+. .+.....
T Consensus 22 aiA~~l~~~--G~~V~i~~~~~~---~~~~~~~~~---------------~~~~~~~~~~~~~~~~------~~~~~~~~ 75 (258)
T d1qsga_ 22 GIAQAMHRE--GAELAFTYQNDK---LKGRVEEFA---------------AQLGSDIVLQCDVAED------ASIDTMFA 75 (258)
T ss_dssp HHHHHHHHT--TCEEEEEESSTT---THHHHHHHH---------------HHTTCCCEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHc--CCEEEEEeCCHH---HHHHHHHHH---------------hhcCCcceeecccchH------HHHHHHHH
Confidence 578899988 999999998632 233333321 1223566777787764 2333332
Q ss_pred ------cCccEEEEcccccCcc------------hhHHHHHHHhHHHHHHHHHHHHhcC-CCccEEEEeccccccCCccc
Q psy7539 81 ------ETIHIVYHIAATVRFD------------DYMQTYVFLNTRGTRDMLNLSKQMI-HLQLFVYVSTAYCHPKEKVL 141 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~~~~------------~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~v~~SS~~~~~~~~~~ 141 (318)
...|+++|+|+..... .........|+.+...+.+++.... .-+.+|++||......
T Consensus 76 ~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~---- 151 (258)
T d1qsga_ 76 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA---- 151 (258)
T ss_dssp HHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----
T ss_pred HhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC----
Confidence 2579999999874221 1123466778888888888877531 2246788888664221
Q ss_pred ccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCC
Q psy7539 142 EEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKD 217 (318)
Q Consensus 142 ~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~ 217 (318)
.| ....|+.||.+.+.+.+..+. +|+++..++||.|..+...
T Consensus 152 ------~~----------------------------~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~ 197 (258)
T d1qsga_ 152 ------IP----------------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 197 (258)
T ss_dssp ------CT----------------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGG
T ss_pred ------CC----------------------------CcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccc
Confidence 01 017899999999999888765 6899999999988543211
Q ss_pred CCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 218 PLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.............. .. | ..-+...+|+|.++..++...... ..+.++.+.++
T Consensus 198 -------~~~~~~~~~~~~~~-~~---p-----l~R~~~peeia~~v~fL~s~~s~~--itG~~i~vDGG 249 (258)
T d1qsga_ 198 -------GIKDFRKMLAHCEA-VT---P-----IRRTVTIEDVGNSAAFLCSDLSAG--ISGEVVHVDGG 249 (258)
T ss_dssp -------GSTTHHHHHHHHHH-HS---T-----TSSCCCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred -------ccchhhhHHHHHHh-CC---C-----CCCCcCHHHHHHHHHHHhCchhcC--ccCceEEECcC
Confidence 11111222222221 11 1 012667899999999988654321 24788888877
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.68 E-value=1.9e-07 Score=76.99 Aligned_cols=190 Identities=8% Similarity=0.003 Sum_probs=115.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCC-CCCCHHHHHHH
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPD-LGISAEDRQML 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~-~gl~~~~~~~~ 79 (318)
+++++.|+++ |++|+++.|.+.... ..-..+..|..+.. ...-.......
T Consensus 16 ~a~a~~l~~~--G~~V~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (236)
T d1dhra_ 16 SRCVQAFRAR--NWWVASIDVVENEEA---------------------------SASVIVKMTDSFTEQADQVTAEVGKL 66 (236)
T ss_dssp HHHHHHHHTT--TCEEEEEESSCCTTS---------------------------SEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCccccc---------------------------cccceeecccCcHHHHHHHHHHHHHH
Confidence 3688999988 999999988654321 12223333333210 00000111122
Q ss_pred hc--CccEEEEcccccC---c-----chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCC
Q psy7539 80 SE--TIHIVYHIAATVR---F-----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPP 148 (318)
Q Consensus 80 ~~--~~d~Vih~Aa~~~---~-----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~ 148 (318)
.. ++|++||+||... . .+.++..+++|+.++.++..++... .+-.++|++||.++....
T Consensus 67 ~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~---------- 136 (236)
T d1dhra_ 67 LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT---------- 136 (236)
T ss_dssp HTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----------
T ss_pred hCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc----------
Confidence 22 4899999998521 1 1234567899999999988887653 223589999997664321
Q ss_pred CCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEecccccccccCCCCCCc
Q psy7539 149 PVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPIWKDPLPGW 222 (318)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G~~~~~~~g~ 222 (318)
| ....|+.||.+.+.+.+..+. .|+++..+.||.+-.+
T Consensus 137 ~----------------------------~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~-------- 180 (236)
T d1dhra_ 137 P----------------------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP-------- 180 (236)
T ss_dssp T----------------------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH--------
T ss_pred c----------------------------CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC--------
Confidence 1 016899999999999998764 2688999999866221
Q ss_pred ccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEee
Q psy7539 223 TDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLT 285 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~ 285 (318)
+...... ....-.|++.+++|+.+..++..... ...+....+.
T Consensus 181 ---------~~~~~~~---------~~~~~~~~~pe~va~~~~~l~s~~~~--~i~G~~i~v~ 223 (236)
T d1dhra_ 181 ---------MNRKSMP---------EADFSSWTPLEFLVETFHDWITGNKR--PNSGSLIQVV 223 (236)
T ss_dssp ---------HHHHHST---------TSCGGGSEEHHHHHHHHHHHHTTTTC--CCTTCEEEEE
T ss_pred ---------cchhhCc---------cchhhcCCCHHHHHHHHHHHhCCCcc--CCCCCeEEEE
Confidence 1111111 11123577889999999988765442 1246666553
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.64 E-value=2.3e-07 Score=77.97 Aligned_cols=184 Identities=11% Similarity=0.022 Sum_probs=115.9
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH-
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML- 79 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~- 79 (318)
++++++|+++ |++|++..|+. +++++..+. +. ......+.++.+|+.+. +....+
T Consensus 28 ~aiA~~la~~--G~~Vil~~r~~------~~l~~~~~~-----~~-----~~~~~~~~~~~~d~~~~------~~~~~~~ 83 (269)
T d1xu9a_ 28 REMAYHLAKM--GAHVVVTARSK------ETLQKVVSH-----CL-----ELGAASAHYIAGTMEDM------TFAEQFV 83 (269)
T ss_dssp HHHHHHHHHT--TCEEEEEESCH------HHHHHHHHH-----HH-----HHTCSEEEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCH------HHHHHHHHH-----Hh-----hhhcccchhhhhhhhhH------HHHHHHH
Confidence 3688999998 99999999952 233322110 00 22345677888888764 233322
Q ss_pred ------hcCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--CCCccEEEEeccccccCCcccccc
Q psy7539 80 ------SETIHIVYHIAATVRF-------DDYMQTYVFLNTRGTRDMLNLSKQM--IHLQLFVYVSTAYCHPKEKVLEEK 144 (318)
Q Consensus 80 ------~~~~d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~v~~SS~~~~~~~~~~~E~ 144 (318)
....|+++++||.... .+.+...+++|+.|+..+.+++... .+-.++|++||..+...
T Consensus 84 ~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~------- 156 (269)
T d1xu9a_ 84 AQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA------- 156 (269)
T ss_dssp HHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-------
T ss_pred HHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC-------
Confidence 2368999999987421 2345568899999988877776532 12247999999766432
Q ss_pred cCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh------cCCcEEEecccccccccCCC
Q psy7539 145 TYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME------AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~ilR~~~v~G~~~~~ 218 (318)
.|. ...|+.||.+.+.+.+..+. .++.+..+.||.|-.
T Consensus 157 ---~p~----------------------------~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T----- 200 (269)
T d1xu9a_ 157 ---YPM----------------------------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDT----- 200 (269)
T ss_dssp ---CTT----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCC-----
T ss_pred ---CCC----------------------------chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCC-----
Confidence 110 17999999999988877653 247788899986611
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhcc
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFL 272 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 272 (318)
.+......+ .........+++|+.++.......
T Consensus 201 ------------~~~~~~~~~---------~~~~~~~~~e~~a~~i~~~~~~~~ 233 (269)
T d1xu9a_ 201 ------------ETAMKAVSG---------IVHMQAAPKEECALEIIKGGALRQ 233 (269)
T ss_dssp ------------HHHHHHSCG---------GGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred ------------cHHHHhccC---------CccccCCCHHHHHHHHHHHhhcCC
Confidence 122222221 112244567899999888776543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.62 E-value=2.2e-06 Score=72.21 Aligned_cols=205 Identities=9% Similarity=0.002 Sum_probs=121.1
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEecc-----------------
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGD----------------- 63 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gD----------------- 63 (318)
++++++|+++ |++|++..|+.. +..+.+.+.+. .........+.+|
T Consensus 16 ~aiA~~la~~--Ga~V~i~~~~~~--~~~~~~~~~l~-------------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d 78 (284)
T d1e7wa_ 16 RSIAEGLHAE--GYAVCLHYHRSA--AEANALSATLN-------------ARRPNSAITVQADLSNVATAPVSGADGSAP 78 (284)
T ss_dssp HHHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHHH-------------HHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred HHHHHHHHHc--CCEEEEEeCCCH--HHHHHHHHHHH-------------hhcCCceEEEEeeccccccccccccccccc
Confidence 3678899998 999998877532 22233332221 1112234444444
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcccccCcc---------------------hhHHHHHHHhHHHHHHHHH
Q psy7539 64 VAVPDLGISAEDRQMLS-------ETIHIVYHIAATVRFD---------------------DYMQTYVFLNTRGTRDMLN 115 (318)
Q Consensus 64 l~~~~~gl~~~~~~~~~-------~~~d~Vih~Aa~~~~~---------------------~~~~~~~~~Nv~gt~~ll~ 115 (318)
+++. +++++++ .++|++||+||..... .....++.+|+.+...+.+
T Consensus 79 v~~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 152 (284)
T d1e7wa_ 79 VTLF------TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK 152 (284)
T ss_dssp BCHH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred CCCH------HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeec
Confidence 4433 3454443 3799999999974211 0112367889988888887
Q ss_pred HHHhc---------CCCccEEEEeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHH
Q psy7539 116 LSKQM---------IHLQLFVYVSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTK 186 (318)
Q Consensus 116 ~a~~~---------~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 186 (318)
++.+. .+...+|++||....... + ....|+.||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~----------~----------------------------~~~~Y~asK 194 (284)
T d1e7wa_ 153 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL----------L----------------------------GYTIYTMAK 194 (284)
T ss_dssp HHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC----------T----------------------------TCHHHHHHH
T ss_pred cccchhhhhHHHhcCCCCcccccccccccCCc----------c----------------------------ceeeecccc
Confidence 75431 122356777775543210 0 016899999
Q ss_pred HHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHH
Q psy7539 187 CLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVN 262 (318)
Q Consensus 187 ~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~ 262 (318)
...+.+.+..+. +|+++..+.||.+-... . .+........... + ...-+...+|+|.
T Consensus 195 aal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~---------~--~~~~~~~~~~~~~----p----l~~R~~~peeiA~ 255 (284)
T d1e7wa_ 195 GALEGLTRSAALELAPLQIRVNGVGPGLSVLVD---------D--MPPAVWEGHRSKV----P----LYQRDSSAAEVSD 255 (284)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG---------G--SCHHHHHHHHTTC----T----TTTSCBCHHHHHH
T ss_pred ccchhhhHHHHHHhCCccccccccccccccccc---------c--CCHHHHHHHHhcC----C----CCCCCCCHHHHHH
Confidence 999999887765 68999999999542110 1 1122333333321 0 0113567899999
Q ss_pred HHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 263 GVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+++.++...... ..+.++.+.++
T Consensus 256 ~v~fL~S~~s~~--itG~~i~VDGG 278 (284)
T d1e7wa_ 256 VVIFLCSSKAKY--ITGTCVKVDGG 278 (284)
T ss_dssp HHHHHHSGGGTT--CCSCEEEESTT
T ss_pred HHHHHhCchhcC--ccCCeEEECcC
Confidence 999888654421 24888998887
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.56 E-value=9.3e-06 Score=67.43 Aligned_cols=208 Identities=8% Similarity=0.003 Sum_probs=120.0
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH--
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML-- 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~-- 79 (318)
+++++|+++ |++|++..|+.. ...+++.+.+. .....+...+..|+.+.. ...+....+
T Consensus 16 aia~~la~~--G~~Vvi~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 76 (266)
T d1mxha_ 16 SIAVRLHQQ--GFRVVVHYRHSE--GAAQRLVAELN-------------AARAGSAVLCKGDLSLSS--SLLDCCEDIID 76 (266)
T ss_dssp HHHHHHHHT--TCEEEEEESSCH--HHHHHHHHHHH-------------HHSTTCEEEEECCCSSST--THHHHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEECCch--HHHHHHHHHHH-------------hhcCCceEEEecccccch--hHHHHHHHHHH
Confidence 678999998 999999999633 22233322211 222345666666655431 112223332
Q ss_pred -----hcCccEEEEcccccCcc------------------hhHHHHHHHhHHHHHHHHHHHHhcC--------CCccEEE
Q psy7539 80 -----SETIHIVYHIAATVRFD------------------DYMQTYVFLNTRGTRDMLNLSKQMI--------HLQLFVY 128 (318)
Q Consensus 80 -----~~~~d~Vih~Aa~~~~~------------------~~~~~~~~~Nv~gt~~ll~~a~~~~--------~~~~~v~ 128 (318)
+..+|++||+||..... .....++..|+.+.......+.... ....++.
T Consensus 77 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (266)
T d1mxha_ 77 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN 156 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred HHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchh
Confidence 23699999999964211 1122355566666555555544321 1224445
Q ss_pred EeccccccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEE
Q psy7539 129 VSTAYCHPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCM 204 (318)
Q Consensus 129 ~SS~~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ 204 (318)
+|+...... .| ....|+.||...+.+.+..+. +|+++.
T Consensus 157 ~~~~~~~~~----------~~----------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN 198 (266)
T d1mxha_ 157 LCDAMTDLP----------LP----------------------------GFCVYTMAKHALGGLTRAAALELAPRHIRVN 198 (266)
T ss_dssp ECCGGGGSC----------CT----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred hhhcccccc----------Cc----------------------------chhhhhhhHHHHhhhHHHHHHHhCccCcEEE
Confidence 555443221 11 117899999999998877765 689999
Q ss_pred EecccccccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEe
Q psy7539 205 ILRPSIIIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINL 284 (318)
Q Consensus 205 ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni 284 (318)
.+.||.+..+. ..+......+.... + ..+-+...+|+|.+++.++...... ..+.++.+
T Consensus 199 ~I~PG~i~t~~-----------~~~~~~~~~~~~~~----p----l~r~~~~peeva~~v~fL~s~~s~~--itG~~i~v 257 (266)
T d1mxha_ 199 AVAPGLSLLPP-----------AMPQETQEEYRRKV----P----LGQSEASAAQIADAIAFLVSKDAGY--ITGTTLKV 257 (266)
T ss_dssp EEEESSBSCCS-----------SSCHHHHHHHHTTC----T----TTSCCBCHHHHHHHHHHHHSGGGTT--CCSCEEEE
T ss_pred EeccCcEeccc-----------cCCHHHHHHHHhcC----C----CCCCCCCHHHHHHHHHHHhCchhCC--ccCCeEEE
Confidence 99999764311 12223333333321 0 1123567999999999998765421 14888998
Q ss_pred eCC
Q psy7539 285 TAN 287 (318)
Q Consensus 285 ~~~ 287 (318)
.++
T Consensus 258 DGG 260 (266)
T d1mxha_ 258 DGG 260 (266)
T ss_dssp STT
T ss_pred Ccc
Confidence 887
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.47 E-value=8e-06 Score=68.31 Aligned_cols=204 Identities=11% Similarity=0.014 Sum_probs=118.7
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh-
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS- 80 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~- 80 (318)
++++.|+++ |++|++..|++. ..++++++. .......+...|+++. +....++
T Consensus 22 AiA~~la~~--Ga~V~i~~r~~~---~~~~~~~l~---------------~~~~~~~~~~~d~~~~------~~~~~~~~ 75 (274)
T d2pd4a1 22 GIAQSCFNQ--GATLAFTYLNES---LEKRVRPIA---------------QELNSPYVYELDVSKE------EHFKSLYN 75 (274)
T ss_dssp HHHHHHHTT--TCEEEEEESSTT---THHHHHHHH---------------HHTTCCCEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHC--CCEEEEEeCCHH---HHHHHHHHH---------------hhCCceeEeeecccch------hhHHHHHH
Confidence 678899988 999999999643 233444331 1234566788898865 3444443
Q ss_pred ------cCccEEEEcccccCcc--------hhHHH---HHHHhHHHHHHHHHHHHhcCCCcc-EEEEeccccccCCcccc
Q psy7539 81 ------ETIHIVYHIAATVRFD--------DYMQT---YVFLNTRGTRDMLNLSKQMIHLQL-FVYVSTAYCHPKEKVLE 142 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~~~~--------~~~~~---~~~~Nv~gt~~ll~~a~~~~~~~~-~v~~SS~~~~~~~~~~~ 142 (318)
..+|++||++|..... ..... ....+..+...+.....+..+... ++.+|+.......
T Consensus 76 ~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~---- 151 (274)
T d2pd4a1 76 SVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM---- 151 (274)
T ss_dssp HHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----
T ss_pred HHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc----
Confidence 3789999999974211 11112 223333344445554443222234 4444444432210
Q ss_pred cccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCC
Q psy7539 143 EKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDP 218 (318)
Q Consensus 143 E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~ 218 (318)
.....|+.+|...+.+.+..+. +|+++..+.||.+......
T Consensus 152 ----------------------------------~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~- 196 (274)
T d2pd4a1 152 ----------------------------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASS- 196 (274)
T ss_dssp ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG-
T ss_pred ----------------------------------ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccc-
Confidence 0117899999999998877654 6899999999977442211
Q ss_pred CCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 219 LPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
............... ....-+...+|+|.++..++...... -.+.++.+.++
T Consensus 197 ------~~~~~~~~~~~~~~~---------~p~~r~~~pedIA~~v~fL~S~~s~~--itG~~i~vDGG 248 (274)
T d2pd4a1 197 ------GIADFRMILKWNEIN---------APLRKNVSLEEVGNAGMYLLSSLSSG--VSGEVHFVDAG 248 (274)
T ss_dssp ------GSTTHHHHHHHHHHH---------STTSSCCCHHHHHHHHHHHHSGGGTT--CCSCEEEESTT
T ss_pred ------ccCchHHHHHHHhhh---------hhccCCcCHHHHHHHHHHHhChhhCC--CcCceEEECCC
Confidence 122211211111111 01124578999999999988764421 24788999887
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.46 E-value=1.7e-06 Score=71.00 Aligned_cols=191 Identities=13% Similarity=0.066 Sum_probs=119.0
Q ss_pred ChhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHh
Q psy7539 1 KVLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLS 80 (318)
Q Consensus 1 ~~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~ 80 (318)
++++++|+++ |++|++..|++... +...+.+|+++. .....+.
T Consensus 15 ~aiA~~la~~--Ga~V~i~~~~~~~~-----------------------------~~~~~~~d~~~~------~~~~~~~ 57 (241)
T d1uaya_ 15 RAAALALKAR--GYRVVVLDLRREGE-----------------------------DLIYVEGDVTRE------EDVRRAV 57 (241)
T ss_dssp HHHHHHHHHH--TCEEEEEESSCCSS-----------------------------SSEEEECCTTCH------HHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEECCcccc-----------------------------cceEeeccccch------hhhHHHH
Confidence 3688999999 99999999964322 445678888764 2222222
Q ss_pred ------cCccEEEEccccc-----------CcchhHHHHHHHhHHHHHHHHHHHHhc---------CCCccEEEEecccc
Q psy7539 81 ------ETIHIVYHIAATV-----------RFDDYMQTYVFLNTRGTRDMLNLSKQM---------IHLQLFVYVSTAYC 134 (318)
Q Consensus 81 ------~~~d~Vih~Aa~~-----------~~~~~~~~~~~~Nv~gt~~ll~~a~~~---------~~~~~~v~~SS~~~ 134 (318)
...+.+++.++.. ......+..++.|+.+...+...+... .+--++|++||..+
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~ 137 (241)
T d1uaya_ 58 ARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA 137 (241)
T ss_dssp HHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH
T ss_pred HhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhh
Confidence 2445666655542 111344567899998888877765432 12237999999766
Q ss_pred ccCCcccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccc
Q psy7539 135 HPKEKVLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSI 210 (318)
Q Consensus 135 ~~~~~~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~ 210 (318)
.... | ....|+.+|.+.+.+.+..+. +|+++..+.||.
T Consensus 138 ~~~~----------~----------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~ 179 (241)
T d1uaya_ 138 FEGQ----------I----------------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGL 179 (241)
T ss_dssp HHCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred ccCC----------C----------------------------CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCc
Confidence 3221 0 117899999999998887765 689999999997
Q ss_pred cccccCCCCCCcccCCCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 211 IIPIWKDPLPGWTDNINGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 211 v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
+-.+... ... ........... +. ..-+...+|+|.++..++..... .++++.+.++
T Consensus 180 i~T~~~~-------~~~--~~~~~~~~~~~----~~----~~R~g~pedvA~~v~fL~s~~~i----TG~~i~VDGG 235 (241)
T d1uaya_ 180 FDTPLLQ-------GLP--EKAKASLAAQV----PF----PPRLGRPEEYAALVLHILENPML----NGEVVRLDGA 235 (241)
T ss_dssp CSSHHHH-------TSC--HHHHHHHHTTC----CS----SCSCCCHHHHHHHHHHHHHCTTC----CSCEEEESTT
T ss_pred ccccccc-------hhh--hhHHHHHHhcC----CC----CCCCcCHHHHHHHHHHHHhCCCC----CCCEEEECCc
Confidence 7432111 111 11222222211 00 01245689999999988864322 5888888776
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.40 E-value=8.8e-07 Score=74.08 Aligned_cols=212 Identities=11% Similarity=0.003 Sum_probs=121.1
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHH--
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQML-- 79 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~-- 79 (318)
+++++|+++ |.+|++..|++. +..+++. .....+...+.+|+++. ++...+
T Consensus 23 aiA~~la~~--Ga~Vil~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~dv~~~------~~~~~~~~ 75 (268)
T d2h7ma1 23 HIARVAQEQ--GAQLVLTGFDRL--RLIQRIT-----------------DRLPAKAPLLELDVQNE------EHLASLAG 75 (268)
T ss_dssp HHHHHHHHT--TCEEEEEECSCH--HHHHHHH-----------------TTSSSCCCEEECCTTCH------HHHHHHHH
T ss_pred HHHHHHHHc--CCEEEEEeCChH--HHHHHHH-----------------HHcCCceeeEeeecccc------cccccccc
Confidence 578899988 999999888532 2222222 22345677889999875 333332
Q ss_pred -----h---cCccEEEEcccccCc---------c---hhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEeccccccCCc
Q psy7539 80 -----S---ETIHIVYHIAATVRF---------D---DYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVSTAYCHPKEK 139 (318)
Q Consensus 80 -----~---~~~d~Vih~Aa~~~~---------~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS~~~~~~~~ 139 (318)
+ ..+|+++|+||.... + ......+..|+.+.......+....+....+.++|......
T Consensus 76 ~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~-- 153 (268)
T d2h7ma1 76 RVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-- 153 (268)
T ss_dssp HHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC--
T ss_pred hhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccccc--
Confidence 2 247999999996311 1 12233566677777777776665423334455554433221
Q ss_pred ccccccCCCCCChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEeccccccccc
Q psy7539 140 VLEEKTYPPPVSPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIW 215 (318)
Q Consensus 140 ~~~E~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~ 215 (318)
.| ....|+.+|.+.+.+.+..+. +|+++..+.||.+-.+.
T Consensus 154 --------~p----------------------------~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~ 197 (268)
T d2h7ma1 154 --------MP----------------------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLA 197 (268)
T ss_dssp --------CT----------------------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHH
T ss_pred --------Cc----------------------------ccchhhccccchhhccccchhhhhccCCcceEEecCCCCChh
Confidence 11 117899999999999887765 68999999999774321
Q ss_pred CCCCCCcccCCCchH--HHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 216 KDPLPGWTDNINGPT--GLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 216 ~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.....+ ...+.. .......... .......+-+...+|+|.++..++...... -.+.++.+.++
T Consensus 198 ~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~--iTG~~i~vDGG 262 (268)
T d2h7ma1 198 MSAIVG---GALGEEAGAQIQLLEEGW----DQRAPIGWNMKDATPVAKTVCALLSDWLPA--TTGDIIYADGG 262 (268)
T ss_dssp HHHHHT---TTTCHHHHHHHHHHHHHH----HHHCTTCCCTTCCHHHHHHHHHHHSSSCTT--CCSEEEEESTT
T ss_pred hhhhcc---chhhhhhccchHHHHHHH----HhcCCCCCCCCCHHHHHHHHHHHhCchhcC--ccCCEEEECcC
Confidence 110000 011110 0111111000 001112234677899999999888543221 24788888887
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.13 E-value=0.00011 Score=62.81 Aligned_cols=94 Identities=7% Similarity=0.035 Sum_probs=68.3
Q ss_pred cCccEEEEcccccC-----c----chhHHHHHHHhHHHHHHHHHHHHhc-CCCccEEEEeccccccCCcccccccCCCCC
Q psy7539 81 ETIHIVYHIAATVR-----F----DDYMQTYVFLNTRGTRDMLNLSKQM-IHLQLFVYVSTAYCHPKEKVLEEKTYPPPV 150 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~v~~SS~~~~~~~~~~~E~~~~~p~ 150 (318)
.++|++||+||... + ...+...+++|+.++..+.+++... ..-.++|.+||..+.... +.
T Consensus 112 G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~--------p~-- 181 (329)
T d1uh5a_ 112 GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV--------PG-- 181 (329)
T ss_dssp CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC--------TT--
T ss_pred CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhcccc--------cc--
Confidence 47999999998632 1 1345678899999999998888764 222478999886653220 11
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEeccccc
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSII 211 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v 211 (318)
+...|+.+|...+.+.+..+. +|+++..+.||.|
T Consensus 182 ---------------------------y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i 220 (329)
T d1uh5a_ 182 ---------------------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL 220 (329)
T ss_dssp ---------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred ---------------------------cchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcc
Confidence 116799999999988877653 4899999999976
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.81 E-value=0.00034 Score=58.65 Aligned_cols=152 Identities=10% Similarity=-0.034 Sum_probs=94.3
Q ss_pred cCccEEEEcccccC-----c----chhHHHHHHHhHHHHHHHHHHHHhcCC-CccEEEEeccccccCCcccccccCCCCC
Q psy7539 81 ETIHIVYHIAATVR-----F----DDYMQTYVFLNTRGTRDMLNLSKQMIH-LQLFVYVSTAYCHPKEKVLEEKTYPPPV 150 (318)
Q Consensus 81 ~~~d~Vih~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~v~~SS~~~~~~~~~~~E~~~~~p~ 150 (318)
.++|++||+||... + ...+...+++|+.+...+.+++..... -...+.+++........ .
T Consensus 118 G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~-- 187 (297)
T d1d7oa_ 118 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP--------G-- 187 (297)
T ss_dssp SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT--------T--
T ss_pred CCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccccc--------c--
Confidence 47999999998631 1 123567889999999999998875311 12455666544322100 0
Q ss_pred ChhHHHHHHhhhcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh-----cCCcEEEecccccccccCCCCCCcccC
Q psy7539 151 SPHNVIEKAELLSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME-----AGMPCMILRPSIIIPIWKDPLPGWTDN 225 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~g~~~~ 225 (318)
....|..+|...+.+...... +|+++..+.||.+..+... .
T Consensus 188 ---------------------------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~-------~ 233 (297)
T d1d7oa_ 188 ---------------------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK-------A 233 (297)
T ss_dssp ---------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS-------C
T ss_pred ---------------------------cccceecccccccccccccchhccccceEEecccccccccchhhh-------h
Confidence 116899999988877755432 5899999999988543221 1
Q ss_pred CCchHHHHHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 226 INGPTGLLIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
......+........ | ..-+...+|+|.+++.++...... ..++++.+.++
T Consensus 234 ~~~~~~~~~~~~~~~----P-----lgR~~~peevA~~v~fL~S~~a~~--itGq~i~vDGG 284 (297)
T d1d7oa_ 234 IGFIDTMIEYSYNNA----P-----IQKTLTADEVGNAAAFLVSPLASA--ITGATIYVDNG 284 (297)
T ss_dssp CSHHHHHHHHHHHHS----S-----SCCCBCHHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred ccCCHHHHHHHHhCC----C-----CCCCCCHHHHHHHHHHHhCchhcC--CcCceEEECcC
Confidence 222223333333211 1 112567899999999988654421 24788888777
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.63 E-value=0.0012 Score=53.72 Aligned_cols=177 Identities=12% Similarity=-0.047 Sum_probs=88.3
Q ss_pred CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc---CCCccEEEEecccccc-CCcccccccCCCCCChhHHHH
Q psy7539 82 TIHIVYHIAATVRFDDYMQTYVFLNTRGTRDMLNLSKQM---IHLQLFVYVSTAYCHP-KEKVLEEKTYPPPVSPHNVIE 157 (318)
Q Consensus 82 ~~d~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~v~~SS~~~~~-~~~~~~E~~~~~p~~~~~~~~ 157 (318)
.+|.++|+|+..............|..+...+.+..... ........+++..... ..... +. .....
T Consensus 62 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~ 132 (257)
T d1fjha_ 62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKN-------PL--ALALE 132 (257)
T ss_dssp CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGC-------TT--HHHHH
T ss_pred CCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhh-------hh--hhhcc
Confidence 589999999986656666677788888887776654321 1334455555532211 10000 00 00000
Q ss_pred HHhh-hcHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHhhh----cCCcEEEecccccccccCCCCCCcccCCCchHHH
Q psy7539 158 KAEL-LSKNELELLKQELLQDFPNGYAYTKCLCEGVVTEYME----AGMPCMILRPSIIIPIWKDPLPGWTDNINGPTGL 232 (318)
Q Consensus 158 ~~~~-~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~ 232 (318)
.-.. ............. ....|+.||.+.+.+.+..+. +|+++..+.||.+-.+... .......+
T Consensus 133 ~g~~~~i~s~~~~~~~~~---~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~-------~~~~~~~~ 202 (257)
T d1fjha_ 133 AGEEAKARAIVEHAGEQG---GNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQ-------AGLQDPRY 202 (257)
T ss_dssp HTCHHHHHHHHHTCCTTH---HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------
T ss_pred CCcEEEEeeehhccCCCc---chHHHHHHhhhhhccccccccccccccccccccccCCcCChhHH-------hhcCCHHH
Confidence 0000 0000000000000 014699999999999888764 6899999999977432110 01110111
Q ss_pred HHHHhcCceeeEecCCCcccCcchHHHHHHHHHHHhhhccCCCCCCCcEEEeeCC
Q psy7539 233 LIGAGKGIIRTMYCDYSTCADFLPVDVLVNGVLLSTWNFLSNPGNTMRVINLTAN 287 (318)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~~~~~~~~~~ni~~~ 287 (318)
.....+.. .+ .-=+...+|+|.++..++...... ..+.++.+.++
T Consensus 203 ~~~~~~~~------~P--lgR~g~p~eva~~v~fL~S~~s~~--itG~~i~vDGG 247 (257)
T d1fjha_ 203 GESIAKFV------PP--MGRRAEPSEMASVIAFLMSPAASY--VHGAQIVIDGG 247 (257)
T ss_dssp ------CC------CS--TTSCCCTHHHHHHHHHHTSGGGTT--CCSCEEEESTT
T ss_pred HHHHHhcC------CC--CCCCcCHHHHHHHHHHHhCchhCC--ccCceEEeCCC
Confidence 11111100 01 112557899999999988655431 24788888776
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=95.66 E-value=0.0043 Score=48.15 Aligned_cols=66 Identities=12% Similarity=0.056 Sum_probs=46.2
Q ss_pred hhHHHHHhhCCCcEEEEEEccCCCCCHHHHHHHHHcChhhHHHhhhcCcchhccceEEEeccCCCCCCCCCHHHHHHHhc
Q psy7539 2 VLLEKILRTCENVKIYILLRPKKNKNSRERLEEIFQSPLYEALKKEQSESAIFEKVIPINGDVAVPDLGISAEDRQMLSE 81 (318)
Q Consensus 2 ~l~~~Ll~~~~~~~V~~l~R~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gDl~~~~~gl~~~~~~~~~~ 81 (318)
.+++.|+++ |.+|++..|+. +++.+..+ .+ . ...++.+..+|+++. ++++++++
T Consensus 38 ~ia~~la~~--G~~V~~~~r~~------~~~~~~~~-----~~------~-~~~~~~~~~~d~~~~------~~~~~~~~ 91 (191)
T d1luaa1 38 RSAALLAGE--GAEVVLCGRKL------DKAQAAAD-----SV------N-KRFKVNVTAAETADD------ASRAEAVK 91 (191)
T ss_dssp HHHHHHHHT--TCEEEEEESSH------HHHHHHHH-----HH------H-HHHTCCCEEEECCSH------HHHHHHTT
T ss_pred HHHHHHHhh--ccchhhcccch------HHHHHHHH-----HH------H-hccchhhhhhhcccH------HHHHHHhc
Confidence 577888888 99999999963 22222211 00 0 113566788899876 68888999
Q ss_pred CccEEEEccccc
Q psy7539 82 TIHIVYHIAATV 93 (318)
Q Consensus 82 ~~d~Vih~Aa~~ 93 (318)
++|+|||+||..
T Consensus 92 ~iDilin~Ag~g 103 (191)
T d1luaa1 92 GAHFVFTAGAIG 103 (191)
T ss_dssp TCSEEEECCCTT
T ss_pred CcCeeeecCccc
Confidence 999999999863
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=81.19 E-value=1.3 Score=31.84 Aligned_cols=56 Identities=9% Similarity=-0.070 Sum_probs=43.6
Q ss_pred HHHHHhcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEec
Q psy7539 75 DRQMLSETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 131 (318)
Q Consensus 75 ~~~~~~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS 131 (318)
++.+.++++|+||-+||.... ..+..++.+.|+.-.+.+++.+.++ +.+-++.+-|
T Consensus 61 ~~~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvt 117 (144)
T d1mlda1 61 QLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICIIS 117 (144)
T ss_dssp GHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred ChHHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhc-CCCeEEEEec
Confidence 466777999999999997532 2445578999999999999999986 6666666555
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=81.15 E-value=2.4 Score=30.34 Aligned_cols=51 Identities=10% Similarity=-0.003 Sum_probs=35.1
Q ss_pred hcCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcCCCccEEEEec
Q psy7539 80 SETIHIVYHIAATVRF-DDYMQTYVFLNTRGTRDMLNLSKQMIHLQLFVYVST 131 (318)
Q Consensus 80 ~~~~d~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~v~~SS 131 (318)
++++|+|+-+||.... .....+....|+.-.+.+.+...+. +.+-++.+-|
T Consensus 70 ~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvt 121 (146)
T d1ez4a1 70 CKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA 121 (146)
T ss_dssp GTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred hccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeC
Confidence 4799999999997532 3445578888999999999999885 6776666655
|