Psyllid ID: psy7758

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-----
Protein Sequence
DLYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECEKGKEVTRARKALKARRRNRRGASSGGEKGEVPAVVEVCERCGAEGGEMLRCALS
Secondary Structure (PSIPRED)
ccEEEEcccccccccccccccccccccccEEEEEcccccEEEEEccccccccEEEEEEcEEccHHHHHHHHHHHHHcccccEEEEEcccccEEEcccccccccccccccccccEEEEEEEccccEEEEEEccccccccEEEEcccccccccccccEEEccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccEEEccccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccEEEEccccccccccccccEEEEcccccEEEEEEcccccEEEEccccccccEEEEEccEEccHHHHHHHHHHHHHccccEEEEEEEcccEEEEccccccccHEEcccccccccEEEEEEcccEEEEEEEEEccccccEEEEEccHHHccccccEEEEcccccccEEEcccccccccHccccccccHHHHHHHHHHHHccccHHHHcccccccccHHHHHcccccccEEEEEccc
Coil and Loop (DISEMBL)
dlyvecnpdscpartkcqnrdfetrnypplevfntgsrgwglkaltDLKRGQFVVEYVGEmidqkelnrrrrdmdrnndhnyyflsldnsryidagkkgnlarfmnhscepnctaekwtvsgdtRVGLFalrdvpagteLVFNYElqkadndgmrrcmcgaascsgfigakkavpptsecekgkEVTRARKALKARRrnrrgassggekgevpAVVEVCERCGAEGGEMLRCALS
Flexible Loop (DISEMBL)
dlyvecnpdscpartkcqnrdfetrnypplevfntgsrgwgLKALTDLKRGQFVVEYvgemidqkelnrrrrdmdrnndhnyyflsldnsryIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGfigakkavpptsecekgkevtrarkalkarrrnrrgassggekgevpavVEVCERCgaeggemlrcals
Low Complexity Region (SEG)
DLYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELnrrrrdmdrnndHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECEKGKEVTrarkalkarrrnrrgaSSGGEKGEVPAVVEVCERCGAEGGEMLRCALS
Disordered region (IsUnstruct)
*********************FETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQ**************DHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGA*******************************************AVVEVCERCGA***********
Disordered Region (DISOPRED)
DLYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFI*****************************************************CGAEGGEMLRCA**
Disordered Region (DISEMBL)
DLYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKK**************************************EVPAVVEVCERCGAEGGEMLRCALS
Disordered Region (DISPRO)
DLYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAK*****************************************PAVVEVCERCGAEGGEMLRCALS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
DLYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECEKGKEVTRARKALKARRRNRRGASSGGEKGEVPAVVEVCERCGAEGGEMLRCALS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
UNIPROTKB|Q96L73	2696	NSD1 "Histone-lysine N-methylt	0.774	0.067	0.532	3.8e-49
UNIPROTKB|F1S3C1	2394	NSD1 "Uncharacterized protein"	0.774	0.076	0.532	4.2e-49
UNIPROTKB|J9NVX7	2429	NSD1 "Uncharacterized protein"	0.774	0.074	0.532	4.2e-49
UNIPROTKB|E1BM66	2698	NSD1 "Uncharacterized protein"	0.774	0.067	0.532	4.9e-49
UNIPROTKB|E2R3Q9	2698	NSD1 "Uncharacterized protein"	0.774	0.067	0.532	4.9e-49
MGI|MGI:1276545	2588	Nsd1 "nuclear receptor-binding	0.774	0.070	0.527	9.7e-49
UNIPROTKB|F1MMY4	1368	WHSC1 "Uncharacterized protein	0.923	0.158	0.456	1.2e-48
RGD|1307748	2381	Nsd1 "nuclear receptor binding	0.774	0.076	0.527	1.4e-48
ZFIN|ZDB-GENE-080519-2	1873	nsd1b "nuclear receptor bindin	0.774	0.097	0.524	2e-48
ZFIN|ZDB-GENE-030131-2581	1461	whsc1 "Wolf-Hirschhorn syndrom	0.910	0.146	0.454	4.5e-48

UNIPROTKB|Q96L73 NSD1 "Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific" [Homo sapiens (taxid:9606)]

 Score = 529 (191.3 bits), Expect = 3.8e-49, P = 3.8e-49
 Identities = 98/184 (53%), Positives = 123/184 (66%)

Query:     2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
             LY EC+P  CPA  +CQN+ F  R YP +E+F T  RGWGL+  TD+K+G+FV EYVGE+
Sbjct:  1917 LY-ECHPTVCPAGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGEL 1975

Query:    62 IDQKELXXXXXXXXXXXXHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS 121
             ID++E              N+Y L+LD  R IDAG KGN ARFMNH C+PNC  +KW+V+
Sbjct:  1976 IDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVN 2035

Query:   122 GDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECE 181
             GDTRVGLFAL D+ AGTEL FNY L+   N G   C CGA +CSGF+G +    P +  E
Sbjct:  2036 GDTRVGLFALSDIKAGTELTFNYNLECLGN-GKTVCKCGAPNCSGFLGVRPKNQPIATEE 2094

Query:   182 KGKE 185
             K K+
Sbjct:  2095 KSKK 2098

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0001702 "gastrulation with mouth forming second" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005694 "chromosome" evidence=IEA

GO:0003682 "chromatin binding" evidence=ISS

GO:0003714 "transcription corepressor activity" evidence=ISS

GO:0016571 "histone methylation" evidence=ISS

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=ISS

GO:0042799 "histone methyltransferase activity (H4-K20 specific)" evidence=ISS

GO:0042974 "retinoic acid receptor binding" evidence=ISS

GO:0046965 "retinoid X receptor binding" evidence=ISS

GO:0046966 "thyroid hormone receptor binding" evidence=ISS

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=ISS;IDA

GO:0050681 "androgen receptor binding" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0003712 "transcription cofactor activity" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0030331 "estrogen receptor binding" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0010452 "histone H3-K36 methylation" evidence=ISS;IDA

GO:0034770 "histone H4-K20 methylation" evidence=ISS

UNIPROTKB|F1S3C1 NSD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 528 (190.9 bits), Expect = 4.2e-49, P = 4.2e-49
 Identities = 98/184 (53%), Positives = 123/184 (66%)

Query:     2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
             LY EC+P  CPA  +CQN+ F  R YP +E+F T  RGWGL+  TD+K+G+FV EYVGE+
Sbjct:  1614 LY-ECHPTVCPAGGRCQNQCFTKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGEL 1672

Query:    62 IDQKELXXXXXXXXXXXXHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS 121
             ID++E              N+Y L+LD  R IDAG KGN ARFMNH C+PNC  +KW+V+
Sbjct:  1673 IDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVN 1732

Query:   122 GDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECE 181
             GDTRVGLFAL D+ AGTEL FNY L+   N G   C CGA +CSGF+G +    P +  E
Sbjct:  1733 GDTRVGLFALSDIKAGTELTFNYNLECLGN-GKTVCKCGAPNCSGFLGVRPKNQPIATEE 1791

Query:   182 KGKE 185
             K K+
Sbjct:  1792 KSKK 1795

GO:0050681 "androgen receptor binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003712 "transcription cofactor activity" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001702 "gastrulation with mouth forming second" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA

UNIPROTKB|J9NVX7 NSD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 528 (190.9 bits), Expect = 4.2e-49, P = 4.2e-49
 Identities = 98/184 (53%), Positives = 123/184 (66%)

Query:     2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
             LY EC+P  CPA  +CQN+ F  R YP +E+F T  RGWGL+  TD+K+G+FV EYVGE+
Sbjct:  1649 LY-ECHPTVCPAGGRCQNQCFTKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGEL 1707

Query:    62 IDQKELXXXXXXXXXXXXHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS 121
             ID++E              N+Y L+LD  R IDAG KGN ARFMNH C+PNC  +KW+V+
Sbjct:  1708 IDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVN 1767

Query:   122 GDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECE 181
             GDTRVGLFAL D+ AGTEL FNY L+   N G   C CGA +CSGF+G +    P +  E
Sbjct:  1768 GDTRVGLFALSDIKAGTELTFNYNLECLGN-GKTVCKCGAPNCSGFLGVRPKNQPIATEE 1826

Query:   182 KGKE 185
             K K+
Sbjct:  1827 KSKK 1830

GO:0005634 "nucleus" evidence=IEA

GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1BM66 NSD1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 528 (190.9 bits), Expect = 4.9e-49, P = 4.9e-49
 Identities = 98/184 (53%), Positives = 123/184 (66%)

Query:     2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
             LY EC+P  CPA  +CQN+ F  R YP +E+F T  RGWGL+  TD+K+G+FV EYVGE+
Sbjct:  1920 LY-ECHPTVCPAGGRCQNQCFTKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGEL 1978

Query:    62 IDQKELXXXXXXXXXXXXHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS 121
             ID++E              N+Y L+LD  R IDAG KGN ARFMNH C+PNC  +KW+V+
Sbjct:  1979 IDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVN 2038

Query:   122 GDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECE 181
             GDTRVGLFAL D+ AGTEL FNY L+   N G   C CGA +CSGF+G +    P +  E
Sbjct:  2039 GDTRVGLFALSDIKAGTELTFNYNLECLGN-GKTVCKCGAPNCSGFLGVRPKNQPIATEE 2097

Query:   182 KGKE 185
             K K+
Sbjct:  2098 KSKK 2101

GO:0050681 "androgen receptor binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003712 "transcription cofactor activity" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001702 "gastrulation with mouth forming second" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA

UNIPROTKB|E2R3Q9 NSD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 528 (190.9 bits), Expect = 4.9e-49, P = 4.9e-49
 Identities = 98/184 (53%), Positives = 123/184 (66%)

Query:     2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
             LY EC+P  CPA  +CQN+ F  R YP +E+F T  RGWGL+  TD+K+G+FV EYVGE+
Sbjct:  1918 LY-ECHPTVCPAGGRCQNQCFTKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGEL 1976

Query:    62 IDQKELXXXXXXXXXXXXHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS 121
             ID++E              N+Y L+LD  R IDAG KGN ARFMNH C+PNC  +KW+V+
Sbjct:  1977 IDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVN 2036

Query:   122 GDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECE 181
             GDTRVGLFAL D+ AGTEL FNY L+   N G   C CGA +CSGF+G +    P +  E
Sbjct:  2037 GDTRVGLFALSDIKAGTELTFNYNLECLGN-GKTVCKCGAPNCSGFLGVRPKNQPIATEE 2095

Query:   182 KGKE 185
             K K+
Sbjct:  2096 KSKK 2099

GO:0005634 "nucleus" evidence=IEA

GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1276545 Nsd1 "nuclear receptor-binding SET-domain protein 1" [Mus musculus (taxid:10090)]

 Score = 525 (189.9 bits), Expect = 9.7e-49, P = 9.7e-49
 Identities = 97/184 (52%), Positives = 122/184 (66%)

Query:     2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
             LY EC+P  CPA  +CQN+ F  R YP +E+F T  RGWGL+  TD+K+G+FV EYVGE+
Sbjct:  1815 LY-ECHPTVCPAGVRCQNQCFSKRQYPDVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGEL 1873

Query:    62 IDQKELXXXXXXXXXXXXHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS 121
             ID++E              N+Y L+LD  R IDAG KGN ARFMNH C+PNC  +KW+V+
Sbjct:  1874 IDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVN 1933

Query:   122 GDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECE 181
             GDTRVGLFAL D+ AGTEL FNY L+   N G   C CGA +CSGF+G +    P    E
Sbjct:  1934 GDTRVGLFALSDIKAGTELTFNYNLECLGN-GKTVCKCGAPNCSGFLGVRPKNQPIVTEE 1992

Query:   182 KGKE 185
             K ++
Sbjct:  1993 KSRK 1996

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0001702 "gastrulation with mouth forming second" evidence=IMP

GO:0003682 "chromatin binding" evidence=IDA

GO:0003712 "transcription cofactor activity" evidence=ISO;IDA

GO:0003714 "transcription corepressor activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IC;IDA

GO:0005694 "chromosome" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=ISO

GO:0010452 "histone H3-K36 methylation" evidence=ISO

GO:0016568 "chromatin modification" evidence=IEA

GO:0016571 "histone methylation" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=IPI

GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=IPI

GO:0032259 "methylation" evidence=IEA

GO:0035097 "histone methyltransferase complex" evidence=IC

GO:0042054 "histone methyltransferase activity" evidence=IDA

GO:0042799 "histone methyltransferase activity (H4-K20 specific)" evidence=IDA

GO:0042974 "retinoic acid receptor binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0046965 "retinoid X receptor binding" evidence=IPI

GO:0046966 "thyroid hormone receptor binding" evidence=IPI

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=ISO;IDA

GO:0050681 "androgen receptor binding" evidence=ISO

UNIPROTKB|F1MMY4 WHSC1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 520 (188.1 bits), Expect = 1.2e-48, P = 1.2e-48
 Identities = 106/232 (45%), Positives = 139/232 (59%)

Query:     2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
             L  EC+P  CPA   CQN+ F  R YP  ++  T  +GWGL A  D+++G+FV EYVGE+
Sbjct:  1040 LMFECHPQVCPAGESCQNQCFTKRQYPETKIVRTDGKGWGLVAKRDIRKGEFVNEYVGEL 1099

Query:    62 IDQKELXXXXXXXXXXXXHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS 121
             ID++E              ++Y L++D  R IDAG KGN +RFMNHSC+PNC   KWTV+
Sbjct:  1100 IDEEECMARIKRAHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCETLKWTVN 1159

Query:   122 GDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAK-KAVPPTSEC 180
             GDTRVGLFA+ D+PAGTEL FNY L    N+    C CGA++CSGF+G + K   P S  
Sbjct:  1160 GDTRVGLFAVCDIPAGTELTFNYNLDCLGNE-KTVCRCGASNCSGFLGDRPKTSAPLSSE 1218

Query:   181 EKGKEVTXXXXXXXXXXXXXXXXSSGGEKGEVPAVVEVCERCGAEGGEMLRC 232
             EKGK+                     GE G+ P+  E C RCG +GG+++ C
Sbjct:  1219 EKGKKTKKKARRRRTK----------GE-GKKPSEDE-CFRCG-DGGQLVLC 1257

GO:0060348 "bone development" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA

GO:0003289 "atrial septum primum morphogenesis" evidence=IEA

GO:0003149 "membranous septum morphogenesis" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1307748 Nsd1 "nuclear receptor binding SET domain protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 523 (189.2 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 97/184 (52%), Positives = 122/184 (66%)

Query:     2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
             LY EC+P  CPA  +CQN+ F  R YP +E+F T  RGWGL+  TD+K+G+FV EYVGE+
Sbjct:  1607 LY-ECHPTVCPAGGRCQNQCFSKRQYPDVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGEL 1665

Query:    62 IDQKELXXXXXXXXXXXXHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS 121
             ID++E              N+Y L+LD  R IDAG KGN ARFMNH C+PNC  +KW+V+
Sbjct:  1666 IDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVN 1725

Query:   122 GDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECE 181
             GDTRVGLFAL D+ AGTEL FNY L+   N G   C CGA +CSGF+G +    P    E
Sbjct:  1726 GDTRVGLFALSDIKAGTELTFNYNLECLGN-GKTVCKCGAPNCSGFLGVRPKNQPIVTEE 1784

Query:   182 KGKE 185
             K ++
Sbjct:  1785 KSRK 1788

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0001702 "gastrulation with mouth forming second" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0003682 "chromatin binding" evidence=IEA;ISO

GO:0003712 "transcription cofactor activity" evidence=IEA;ISO

GO:0003714 "transcription corepressor activity" evidence=ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA;ISO

GO:0010452 "histone H3-K36 methylation" evidence=ISO

GO:0016571 "histone methylation" evidence=ISO

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=ISO

GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=ISO

GO:0042054 "histone methyltransferase activity" evidence=ISO

GO:0042799 "histone methyltransferase activity (H4-K20 specific)" evidence=ISO

GO:0042974 "retinoic acid receptor binding" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA;ISO

GO:0046965 "retinoid X receptor binding" evidence=ISO

GO:0046966 "thyroid hormone receptor binding" evidence=ISO

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=ISO

GO:0050681 "androgen receptor binding" evidence=IEA;ISO

ZFIN|ZDB-GENE-080519-2 nsd1b "nuclear receptor binding SET domain protein 1b" [Danio rerio (taxid:7955)]

 Score = 520 (188.1 bits), Expect = 2.0e-48, P = 2.0e-48
 Identities = 97/185 (52%), Positives = 126/185 (68%)

Query:     2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
             LY EC+P  CPA  +CQN+ F  R Y  +E F T SRGWGL+ + D+K+G F+ EYVGE+
Sbjct:  1470 LY-ECHPQVCPAGERCQNQCFIKRQYCQVETFRTLSRGWGLRCVHDIKKGGFISEYVGEV 1528

Query:    62 IDQKELXXXXXXXXXXXXHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS 121
             ID++E              N+Y L+LD  R IDAG KGN ARFMNH C+PNC  +KWTV+
Sbjct:  1529 IDEEECRARIKHAQENNIGNFYMLTLDKDRIIDAGPKGNEARFMNHCCQPNCETQKWTVN 1588

Query:   122 GDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECE 181
             GDTRVGLF+L D+PAGTEL FNY L+   N G   C CGA++CSGF+G +    P S+ +
Sbjct:  1589 GDTRVGLFSLTDIPAGTELTFNYNLECLGN-GKTVCKCGASNCSGFLGVRPKNNPPSD-D 1646

Query:   182 KGKEV 186
             KG+++
Sbjct:  1647 KGRKL 1651

GO:0008270 "zinc ion binding" evidence=IEA

GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0032259 "methylation" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-030131-2581 whsc1 "Wolf-Hirschhorn syndrome candidate 1" [Danio rerio (taxid:7955)]

 Score = 515 (186.3 bits), Expect = 4.5e-48, P = 4.5e-48
 Identities = 105/231 (45%), Positives = 139/231 (60%)

Query:     2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
             LY EC+P  CPA  +CQN+DF  R YP  ++  T  +GWGL +L D+K+G+FV EYVGE+
Sbjct:  1129 LY-ECHPQVCPAGERCQNQDFTKRLYPETKIIRTAGKGWGLISLRDIKKGEFVNEYVGEL 1187

Query:    62 IDQKELXXXXXXXXXXXXHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS 121
             ID++E              ++Y L++D  R IDAG KGN +RFMNHSC+PNC  +KWTV+
Sbjct:  1188 IDEEECRSRIRHAQENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQPNCETQKWTVN 1247

Query:   122 GDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSECE 181
             GDTRVGLFA+ D+PAGTEL FNY L    N+    C CGA +CSGF+G +     TSE  
Sbjct:  1248 GDTRVGLFAVCDIPAGTELTFNYNLDCLGNE-KTVCRCGAPNCSGFLGDRPKNGHTSE-P 1305

Query:   182 KGKEVTXXXXXXXXXXXXXXXXSSGGEKGEVPAVVEVCERCGAEGGEMLRC 232
             K K                    + G+K E     + C RCG +GG+++ C
Sbjct:  1306 KAK--------LQKKKPKRKRARNEGKKSE-----DECFRCG-DGGQLVLC 1342

GO:0008270 "zinc ion binding" evidence=IEA

GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0051216 "cartilage development" evidence=IMP

GO:0010452 "histone H3-K36 methylation" evidence=IMP

GO:0048706 "embryonic skeletal system development" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0032259 "methylation" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.1.43	0.737
3rd Layer	2.1.1	0.691

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	235
smart00317	124	smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest	4e-44
pfam00856	113	pfam00856, SET, SET domain	6e-34
COG2940	480	COG2940, COG2940, Proteins containing SET domain [	1e-21

>gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain

 Score =  144 bits (364), Expect = 4e-44
 Identities = 53/117 (45%), Positives = 75/117 (64%)

Query: 28  PPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSL 87
             LEVF +  +GWG++A  D+ +G+F+ EYVGE+I  +E   R +  D +    +Y   +
Sbjct: 1   NKLEVFKSPGKGWGVRATEDIPKGEFIGEYVGEIITSEEAEERPKAYDTDGAKAFYLFDI 60

Query: 88  DNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
           D+   IDA +KGNLARF+NHSCEPNC      V+GD R+ +FALRD+  G EL  +Y
Sbjct: 61  DSDLCIDARRKGNLARFINHSCEPNCELLFVEVNGDDRIVIFALRDIKPGEELTIDY 117

Putative methyl transferase, based on outlier plant homologues. Length = 124

>gnl|CDD|216155 pfam00856, SET, SET domain

 Score =  117 bits (295), Expect = 6e-34
 Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 6/112 (5%)

Query: 39  GWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRN------NDHNYYFLSLDNSRY 92
           G GL A  D+ +G+ ++EYVGE+I  +E   R    ++       +D   +   LD+   
Sbjct: 1   GRGLFATRDIPKGELIIEYVGELITPEEAEERELLYNKEELRGLLSDLELFLSRLDSEYD 60

Query: 93  IDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
           IDA   GN+ARF+NHSCEPNC      V+G  R+ + ALRD+  G EL  +Y
Sbjct: 61  IDATGLGNVARFINHSCEPNCEVRFVFVNGGDRIVVRALRDIKPGEELTIDY 112

SET domains are protein lysine methyltransferase enzymes. SET domains appear to be protein-protein interaction domains. It has been demonstrated that SET domains mediate interactions with a family of proteins that display similarity with dual-specificity phosphatases (dsPTPases). A subset of SET domains have been called PR domains. These domains are divergent in sequence from other SET domains, but also appear to mediate protein-protein interaction. The SET domain consists of two regions known as SET-N and SET-C. SET-C forms an unusual and conserved knot-like structure of probably functional importance. Additionally to SET-N and SET-C, an insert region (SET-I) and flanking regions of high structural variability form part of the overall structure. Length = 113

>gnl|CDD|225491 COG2940, COG2940, Proteins containing SET domain [General function prediction only]

 Score = 92.2 bits (229), Expect = 1e-21
 Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 7/149 (4%)

Query: 28  PPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSL 87
            P  V  +  +G+G+ AL  +K+G+F++EY GE+I +KE   R  + D   +   + L  
Sbjct: 332 EPNVVQESEIKGYGVFALESIKKGEFIIEYHGEIIRRKEAREREENYDLLGNEFSFGLLE 391

Query: 88  DNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQ 147
           D  +  D+ K G++ARF+NHSC PNC A    V+G  ++ ++A+RD+ AG EL ++Y   
Sbjct: 392 DKDKVRDSQKAGDVARFINHSCTPNCEASPIEVNGIFKISIYAIRDIKAGEELTYDYGPS 451

Query: 148 KADNDGMRR-------CMCGAASCSGFIG 169
             DN  +++       C CG   CS  + 
Sbjct: 452 LEDNRELKKLLEKRWGCACGEDRCSHTMS 480

Length = 480

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	235
KOG4442|consensus	729		100.0
KOG1082|consensus	364		99.97
KOG1080|consensus	1005		99.97
smart00317	116	SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)	99.95
KOG1079|consensus	739		99.94
KOG1083|consensus	1306		99.89
KOG1085|consensus	392		99.83
KOG1141|consensus	1262		99.77
PF00856	162	SET: SET domain; InterPro: IPR001214 The SET domai	99.75
COG2940	480	Proteins containing SET domain [General function p	99.74
KOG2589|consensus	453		99.61
KOG1081|consensus	463		99.51
KOG2461|consensus	396		98.69
KOG1141|consensus	1262		97.76
smart00570	51	AWS associated with SET domains. subdomain of PRES	97.48
smart00508	26	PostSET Cysteine-rich motif following a subset of	96.44
KOG2084|consensus	482		95.28
KOG1337|consensus	472		92.9

>KOG4442|consensus

Probab=100.00  E-value=2.2e-48  Score=361.32  Aligned_cols=175  Identities=42%  Similarity=0.913  Sum_probs=169.0

Q ss_pred             ceEEcCCCCCC-CCCCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCC
Q psy7758           2 LYVECNPDSCP-ARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDH   80 (235)
Q Consensus         2 ~~~eC~~~~C~-~~~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~   80 (235)
                      +..||+++.|+ ||.+|+|+.||+.++.+++||.+.++||||+|..+|++|+||+||.|++|+..++..|...|..++..
T Consensus        93 t~iECs~~~C~~cg~~C~NQRFQkkqyA~vevF~Te~KG~GLRA~~dI~~g~FI~EY~GEVI~~~Ef~kR~~~Y~~d~~k  172 (729)
T KOG4442|consen   93 TSIECSDRECPRCGVYCKNQRFQKKQYAKVEVFLTEKKGCGLRAEEDIPKGQFILEYIGEVIEEKEFEKRVKRYAKDGIK  172 (729)
T ss_pred             hhcccCCccCCCccccccchhhhhhccCceeEEEecCcccceeeccccCCCcEEeeeccccccHHHHHHHHHHHHhcCCc
Confidence            35799999999 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeeecCCCeEEeccccCCccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCCCCeEEecC
Q psy7758          81 NYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCG  160 (235)
Q Consensus        81 ~~~~~~~~~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~~~~~C~Cg  160 (235)
                      ++|++.+.++.+|||+.+||+||||||||+|||.++.|.|++..+|.|||.|+|++||||||||..+.++.. ...|.||
T Consensus       173 h~Yfm~L~~~e~IDAT~KGnlaRFiNHSC~PNa~~~KWtV~~~lRvGiFakk~I~~GEEITFDYqf~rYGr~-AQ~CyCg  251 (729)
T KOG4442|consen  173 HYYFMALQGGEYIDATKKGNLARFINHSCDPNAEVQKWTVPDELRVGIFAKKVIKPGEEITFDYQFDRYGRD-AQPCYCG  251 (729)
T ss_pred             eEEEEEecCCceecccccCcHHHhhcCCCCCCceeeeeeeCCeeEEEEeEecccCCCceeeEeccccccccc-ccccccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999988 8999999


Q ss_pred             CCCCceeccCCCCCCCC
Q psy7758         161 AASCSGFIGAKKAVPPT  177 (235)
Q Consensus       161 ~~~C~g~~~~~~~~~~~  177 (235)
                      +++|+|||++.++....
T Consensus       252 eanC~G~IGgk~q~da~  268 (729)
T KOG4442|consen  252 EANCRGWIGGKPQTDAS  268 (729)
T ss_pred             CcccccccCCCCccccc
Confidence            99999999998765433

>KOG1082|consensus

Probab=99.97  E-value=5.7e-32  Score=244.71  Aligned_cols=171  Identities=34%  Similarity=0.632  Sum_probs=141.1

Q ss_pred             CceEEcCCCCCCCCCCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCC-
Q psy7758           1 DLYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNND-   79 (235)
Q Consensus         1 ~~~~eC~~~~C~~~~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~-   79 (235)
                      +++|||++ .|+|+..|.||+.|++...+|+|++++.+||||++...|++|++|+||.|++++.++++.+......... 
T Consensus       150 ~~i~EC~~-~C~C~~~C~nRv~q~g~~~~leIfrt~~kGwgvRs~~~I~~G~fvcEyaGe~~t~~e~~~~~~~~~~~~~~  228 (364)
T KOG1082|consen  150 EPVFECSV-ACGCHPDCANRVVQKGLQFHLEVFRTPEKGWGVRTLDPIPAGEFVCEYAGEVLTSEEAQRRTHLREYLDDD  228 (364)
T ss_pred             cccccccc-CCCCCCcCcchhhccccccceEEEecCCceeeecccccccCCCeeEEEeeEecChHHhhhccccccccccc
Confidence            46899998 8999999999999999999999999999999999999999999999999999999998876332222111 


Q ss_pred             -Cce------e---------------eeecCCCeEEeccccCCccccccCCCCCCceeEEEEECCc----eEEEEEEccC
Q psy7758          80 -HNY------Y---------------FLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGD----TRVGLFALRD  133 (235)
Q Consensus        80 -~~~------~---------------~~~~~~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~----~~~~i~A~rd  133 (235)
                       ..+      |               .......+.|||...||++|||||||.||..++.+..+..    .++.++|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ida~~~GNv~RfinHSC~PN~~~~~v~~~~~~~~~~~i~ffa~~~  308 (364)
T KOG1082|consen  229 CDAYSIADREWVDESPVGNTFVAPSLPGGPGRELLIDAKPHGNVARFINHSCSPNLLYQAVFQDEFVLLYLRIGFFALRD  308 (364)
T ss_pred             cccchhhhccccccccccccccccccccCCCcceEEchhhcccccccccCCCCccceeeeeeecCCccchheeeeeeccc
Confidence             000      0               1112456789999999999999999999999887766532    7899999999


Q ss_pred             CCCCCeEEEecCCCcc-----C-----CCCCeEEecCCCCCceeccCCC
Q psy7758         134 VPAGTELVFNYELQKA-----D-----NDGMRRCMCGAASCSGFIGAKK  172 (235)
Q Consensus       134 I~~GEElt~~Y~~~~~-----~-----~~~~~~C~Cg~~~C~g~~~~~~  172 (235)
                      |.+|||||+||+..+.     +     ......|.|++..|++.+....
T Consensus       309 I~p~~ELT~dYg~~~~~~~~~~~~~~~~~~~~~c~c~~~~cr~~~~~~~  357 (364)
T KOG1082|consen  309 ISPGEELTLDYGKAYKLLVQDGANIYTPVMKKNCNCGLEKCRGLLGSAP  357 (364)
T ss_pred             cCCCcccchhhcccccccccccccccccccchhhcCCCHHhCcccCCCc
Confidence            9999999999997753     1     2247789999999999987643

>KOG1080|consensus

Probab=99.97  E-value=1.7e-31  Score=261.79  Aligned_cols=139  Identities=38%  Similarity=0.796  Sum_probs=131.5

Q ss_pred             CCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEEeccccCCccccccC
Q psy7758          28 PPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNH  107 (235)
Q Consensus        28 ~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~~gn~aRfiNH  107 (235)
                      ..|...++.++||||||+++|.+|++|+||+|+++...-++.|+..|...+....|+|.++..++|||+..||+||||||
T Consensus       866 k~~~F~~s~iH~wglfa~~~i~~~dmViEY~Ge~vR~~iad~RE~~Y~~~gi~~sYlfrid~~~ViDAtk~gniAr~InH  945 (1005)
T KOG1080|consen  866 KYVKFGRSGIHGWGLFAMENIAAGDMVIEYRGELVRSSIADLREARYERMGIGDSYLFRIDDEVVVDATKKGNIARFINH  945 (1005)
T ss_pred             hhhccccccccccceeeccCccccceEEEeeceehhhhHHHHHHHHHhccCcccceeeecccceEEeccccCchhheeec
Confidence            34788889999999999999999999999999999999999999999999989999999999999999999999999999


Q ss_pred             CCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCCCCeEEecCCCCCceec
Q psy7758         108 SCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFI  168 (235)
Q Consensus       108 SC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~~~~~C~Cg~~~C~g~~  168 (235)
                      ||.|||....+.++|+.+|+|+|.|+|.+|||||+||-....+.  ...|+|||++|||++
T Consensus       946 sC~PNCyakvi~V~g~~~IvIyakr~I~~~EElTYDYkF~~e~~--kipClCgap~Crg~~ 1004 (1005)
T KOG1080|consen  946 SCNPNCYAKVITVEGDKRIVIYSKRDIAAGEELTYDYKFPTEDD--KIPCLCGAPNCRGFL 1004 (1005)
T ss_pred             ccCCCceeeEEEecCeeEEEEEEecccccCceeeeecccccccc--ccccccCCCcccccc
Confidence            99999999999999999999999999999999999998766554  899999999999987

>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain

Probab=99.95  E-value=6.8e-27  Score=176.47  Aligned_cols=116  Identities=45%  Similarity=0.903  Sum_probs=100.4

Q ss_pred             CEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEEeccccCCccccccCC
Q psy7758          29 PLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHS  108 (235)
Q Consensus        29 ~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~~gn~aRfiNHS  108 (235)
                      +++++.++++|+||||+++|++|++|++|.|.++...+.......+........+++.......||+...++++||||||
T Consensus         1 ~~~~~~~~~~G~gl~a~~~i~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~iNHs   80 (116)
T smart00317        1 KLEVFKSPGKGWGVRATEDIPKGEFIGEYVGEIITSEEAEERSKAYDTDGADSFYLFEIDSDLCIDARRKGNIARFINHS   80 (116)
T ss_pred             CcEEEecCCCcEEEEECCccCCCCEEEEEEeEEECHHHHHHHHHHHHhcCCCCEEEEECCCCEEEeCCccCcHHHeeCCC
Confidence            36788899999999999999999999999999999988877654333333324567777777899999999999999999


Q ss_pred             CCCCceeEEEEECCceEEEEEEccCCCCCCeEEEec
Q psy7758         109 CEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNY  144 (235)
Q Consensus       109 C~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y  144 (235)
                      |.||+.+..+..++..++.++|+|||++|||||++|
T Consensus        81 c~pN~~~~~~~~~~~~~~~~~a~r~I~~GeEi~i~Y  116 (116)
T smart00317       81 CEPNCELLFVEVNGDSRIVIFALRDIKPGEELTIDY  116 (116)
T ss_pred             CCCCEEEEEEEECCCcEEEEEECCCcCCCCEEeecC
Confidence            999999987777666689999999999999999999

Putative methyl transferase, based on outlier plant homologues

>KOG1079|consensus

Probab=99.94  E-value=9.1e-28  Score=222.91  Aligned_cols=146  Identities=36%  Similarity=0.687  Sum_probs=136.4

Q ss_pred             EEcCCCCCCC-C---------CCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHh
Q psy7758           4 VECNPDSCPA-R---------TKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRD   73 (235)
Q Consensus         4 ~eC~~~~C~~-~---------~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~   73 (235)
                      -||+|++|.+ +         -+|.|-.++.+.+.++.+.+|...|||||+++.+.++++|.||+|++|+.+|+++|...
T Consensus       560 rECdPd~Cl~cg~~~~~d~~~~~C~N~~l~~~~qkr~llapSdVaGwGlFlKe~v~KnefisEY~GE~IS~dEADrRGki  639 (739)
T KOG1079|consen  560 RECDPDVCLMCGNVDHFDSSKISCKNTNLQRGEQKRVLLAPSDVAGWGLFLKESVSKNEFISEYTGEIISHDEADRRGKI  639 (739)
T ss_pred             cccCchHHhccCcccccccCccccccchhhhhhhcceeechhhccccceeeccccCCCceeeeecceeccchhhhhcccc
Confidence            5899999986 3         39999999999999999999999999999999999999999999999999999999988


Q ss_pred             hccCCCCceeeeecCCCeEEeccccCCccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCC
Q psy7758          74 MDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADN  151 (235)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~  151 (235)
                      ++..  ...|+|.+..+++||++..||.+||+|||-.|||....+.++|..+|.|+|.|+|.+|||||+||.++-...
T Consensus       640 YDr~--~cSflFnln~dyviDs~rkGnk~rFANHS~nPNCYAkvm~V~GdhRIGifAkRaIeagEELffDYrYs~~~~  715 (739)
T KOG1079|consen  640 YDRY--MCSFLFNLNNDYVIDSTRKGNKIRFANHSFNPNCYAKVMMVAGDHRIGIFAKRAIEAGEELFFDYRYSPEHA  715 (739)
T ss_pred             cccc--cceeeeeccccceEeeeeecchhhhccCCCCCCcEEEEEEecCCcceeeeehhhcccCceeeeeeccCcccc
Confidence            8876  556888999999999999999999999999999999999999999999999999999999999998876553

>KOG1083|consensus

Probab=99.89  E-value=1.5e-24  Score=208.73  Aligned_cols=137  Identities=43%  Similarity=0.896  Sum_probs=121.7

Q ss_pred             CCCCCccCCCCC-CCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEE
Q psy7758          15 TKCQNRDFETRN-YPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYI   93 (235)
Q Consensus        15 ~~C~N~~~~~~~-~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i   93 (235)
                      +.|.|+.|++.. -++|+|++.+..||||.|.++|++||+|+||+|++++..+++.++.....+. ...|.+.+..+.++
T Consensus      1164 d~c~nqrm~r~e~cp~L~v~~gp~~G~~v~tk~PikagtfI~EYvGeVit~ke~e~~mmtl~~~d-~~~~cL~I~p~l~i 1242 (1306)
T KOG1083|consen 1164 DSCSNQRMQRHEECPPLEVFRGPKKGWGVRTKEPIKAGTFIMEYVGEVITEKEFEPRMMTLYHND-DDHYCLVIDPGLFI 1242 (1306)
T ss_pred             hhhhhHHhhhhccCCCcceeccCCCCccccccccccccchHHHHHHHHHHHHhhcccccccCCCC-CcccccccCccccC
Confidence            468899888654 5899999999999999999999999999999999999999888854444433 34578899999999


Q ss_pred             eccccCCccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCC
Q psy7758          94 DAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADND  152 (235)
Q Consensus        94 Da~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~  152 (235)
                      |+..++|.+||+||+|.|||..+.|.++|..||.|||+|||.+|||||+||+...+...
T Consensus      1243 d~~R~~n~~RfinhscKPNc~~qkwSVNG~~Rv~L~A~rDi~kGEELtYDYN~ks~~~p 1301 (1306)
T KOG1083|consen 1243 DIPRMGNGARFINHSCKPNCEMQKWSVNGEYRVGLFALRDLPKGEELTYDYNFKSFNYP 1301 (1306)
T ss_pred             ChhhccccccccccccCCCCccccccccceeeeeeeecCCCCCCceEEEeccccccCCc
Confidence            99999999999999999999999999999999999999999999999999987655433

>KOG1085|consensus

Probab=99.83  E-value=1.4e-20  Score=160.52  Aligned_cols=124  Identities=30%  Similarity=0.485  Sum_probs=109.3

Q ss_pred             CCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCC---CCceeeeecCCCeEEeccccCC-
Q psy7758          25 RNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNN---DHNYYFLSLDNSRYIDAGKKGN-  100 (235)
Q Consensus        25 ~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~iDa~~~gn-  100 (235)
                      +....+.+....++|+||+|++++.+|+||.||.|.+|...++..++..|..+.   .+.|||-+....++|||+...+ 
T Consensus       253 g~~egl~~~~~dgKGRGv~a~~~F~rgdFVVEY~Gdliei~eAk~rE~~Ya~De~~GcYMYyF~h~sk~yCiDAT~et~~  332 (392)
T KOG1085|consen  253 GTNEGLLEVYKDGKGRGVRAKVNFERGDFVVEYRGDLIEISEAKVREEQYANDEEIGCYMYYFEHNSKKYCIDATKETPW  332 (392)
T ss_pred             ccccceeEEeeccccceeEeecccccCceEEEEecceeeechHHHHHHHhccCcccceEEEeeeccCeeeeeeccccccc
Confidence            455567777788899999999999999999999999999999999988887654   3566666778899999996555 


Q ss_pred             ccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCc
Q psy7758         101 LARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQK  148 (235)
Q Consensus       101 ~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~  148 (235)
                      ++|.||||-.+|+....+.+++.++++++|.|||.+||||++||+.-.
T Consensus       333 lGRLINHS~~gNl~TKvv~Idg~pHLiLvA~rdIa~GEELlYDYGDRS  380 (392)
T KOG1085|consen  333 LGRLINHSVRGNLKTKVVEIDGSPHLILVARRDIAQGEELLYDYGDRS  380 (392)
T ss_pred             chhhhcccccCcceeeEEEecCCceEEEEeccccccchhhhhhccccc
Confidence            789999999999999999999999999999999999999999998754

>KOG1141|consensus

Probab=99.77  E-value=4.8e-19  Score=167.60  Aligned_cols=165  Identities=30%  Similarity=0.549  Sum_probs=123.1

Q ss_pred             eEEcCCCCCCCCCCCCCccCCCCCCC--------CEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhh
Q psy7758           3 YVECNPDSCPARTKCQNRDFETRNYP--------PLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDM   74 (235)
Q Consensus         3 ~~eC~~~~C~~~~~C~N~~~~~~~~~--------~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~   74 (235)
                      ++||+. -|.|...|.|++++.....        .|.|+.+...|||+.+..||+.-++|.+|.|...+..-+.+.-...
T Consensus       981 f~e~~~-hss~~~~e~~~~v~~~~~~~me~~s~~~l~i~~~~~~~~~~~edtD~~~~~~~~~~~~~ppt~~l~~~~r~aq 1059 (1262)
T KOG1141|consen  981 FFECND-HSSCHRKEYNRVVQNNIKYPMEVSSFNDLQIFKTAQSGWGVREDTDIPQSTFICTYVGAPPTDDLADELRNAQ 1059 (1262)
T ss_pred             ceeccc-cchhcccccchhhhcCCccceeeeecccccccccccccccccccccCCCCcccccccCCCCchhhHHHHhhhh
Confidence            578985 7999999999998766443        4556666778999999999999999999998875543322111100


Q ss_pred             ccCC-------------------CCc------------------------------------------------------
Q psy7758          75 DRNN-------------------DHN------------------------------------------------------   81 (235)
Q Consensus        75 ~~~~-------------------~~~------------------------------------------------------   81 (235)
                      ....                   .+.                                                      
T Consensus      1060 ad~~sn~~D~~~~~~l~es~~~~~T~~r~~t~~~~~~~~~d~dd~q~I~k~ve~qd~~~~~~~T~~~~RQ~~~~s~k~~~ 1139 (1262)
T KOG1141|consen 1060 ADQYSNDLDLKDTVELEESREDHETDFRGDTSDYDDEEGSDGDDGQDIMKMVERQDSSESGEETKRLTRQKRKQSKKSGK 1139 (1262)
T ss_pred             hccccCccchhhhhhhhhcccccccccCCCCCCCcccccccCccHHHHHHHhhcccccccccccchhhhhhhhhhhhccc
Confidence            0000                   000                                                      


Q ss_pred             -----------e-------------------eeeecCCCeEEeccccCCccccccCCCCCCceeEEEEECCc----eEEE
Q psy7758          82 -----------Y-------------------YFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGD----TRVG  127 (235)
Q Consensus        82 -----------~-------------------~~~~~~~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~----~~~~  127 (235)
                                 .                   +++....-++|||...||++||+||||.||..++.++++.+    +.|+
T Consensus      1140 ~~s~~~~~~ts~~~~~~dkges~~~~~~~~~~y~~~~~~yvIDAk~eGNlGRfLNHSC~PNl~VQnVfvdTHdlrfPwVA 1219 (1262)
T KOG1141|consen 1140 GGSVEKDDTTSRDSMEKDKGESKDEPVFNWDKYFEPFPLYVIDAKQEGNLGRFLNHSCDPNLHVQNVFVDTHDLRFPWVA 1219 (1262)
T ss_pred             CccccccccCccchhhhccCccCcccccchhhccCCCceEEEecccccchhhhhccCCCccceeeeeeeeccccCCchhh
Confidence                       0                   00001123579999999999999999999999999998765    7799


Q ss_pred             EEEccCCCCCCeEEEecCCCccCCC-CCeEEecCCCCCceec
Q psy7758         128 LFALRDVPAGTELVFNYELQKADND-GMRRCMCGAASCSGFI  168 (235)
Q Consensus       128 i~A~rdI~~GEElt~~Y~~~~~~~~-~~~~C~Cg~~~C~g~~  168 (235)
                      +||.+-|++|.||||||++.-.... ....|+||+.+|||.|
T Consensus      1220 FFt~kyVkAgtELTWDY~Ye~g~v~~keL~C~CGa~~CrgrL 1261 (1262)
T KOG1141|consen 1220 FFTRKYVKAGTELTWDYQYEQGQVATKELTCHCGAENCRGRL 1261 (1262)
T ss_pred             hhhhhhhccCceeeeeccccccccccceEEEecChhhhhccc
Confidence            9999999999999999988765433 3678999999999976

>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco

Probab=99.75  E-value=1.9e-18  Score=136.07  Aligned_cols=107  Identities=21%  Similarity=0.270  Sum_probs=72.8

Q ss_pred             ceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHH---hhc------------------------------------cCCC
Q psy7758          39 GWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRR---DMD------------------------------------RNND   79 (235)
Q Consensus        39 G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~---~~~------------------------------------~~~~   79 (235)
                      |+||||+++|++|++|+...+.+++.........   ...                                    ....
T Consensus         1 GrGl~At~dI~~Ge~I~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (162)
T PF00856_consen    1 GRGLFATRDIKAGEVILIPRPAILTPDEVSPQPELLRLQLSKALEEQSRSDFSIQKKQKAEKSERSPQLESLHSISLRSE   80 (162)
T ss_dssp             SEEEEESS-B-TTEEEEEESEEEEEHHHHHCHHHHSHHTTCSSSCSHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCHTTT
T ss_pred             CEEEEECccCCCCCEEEEECcceEEehhhhhcccchhhhhhhhhcccccccccccccccccccccccccccccccccccc
Confidence            8999999999999999988888888776643100   000                                    0000


Q ss_pred             ----------------CceeeeecCCCeEEeccccCCccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEe
Q psy7758          80 ----------------HNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFN  143 (235)
Q Consensus        80 ----------------~~~~~~~~~~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~  143 (235)
                                      ..............++....+++.|+||||.|||.+..........+.|+|+|||++|||||++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~d~~NHsc~pn~~~~~~~~~~~~~~~~~a~r~I~~GeEi~is  160 (162)
T PF00856_consen   81 LQFSQAFQWSWFISWTRSDFSSRSFSEDDRDGIALYPFADMLNHSCDPNCEVSFDFDGDGGCLVVRATRDIKKGEEIFIS  160 (162)
T ss_dssp             CCTCCHHHHHHHHHHHHHEEEEEEETTEEEEEEEEETGGGGSEEESSTSEEEEEEEETTTTEEEEEESS-B-TTSBEEEE
T ss_pred             ccccccccchhhccccceeeeccccccccccccccCcHhHheccccccccceeeEeecccceEEEEECCccCCCCEEEEE
Confidence                            0001111112334555667778999999999999997765567799999999999999999999


Q ss_pred             cC
Q psy7758         144 YE  145 (235)
Q Consensus       144 Y~  145 (235)
                      ||
T Consensus       161 YG  162 (162)
T PF00856_consen  161 YG  162 (162)
T ss_dssp             ST
T ss_pred             EC
Confidence            97

The SET domain itself turned out to be an uncommon structure. Although in all three studies, electron density maps revealed the location of the AdoMet or AdoHcy cofactor, the SET domain bears no similarity at all to the canonical/AdoMet-dependent methyltransferase fold. Strictly conserved in the C-terminal motif of the SET domain tyrosine could be involved in abstracting a proton from the protonated amino group of the substrate lysine, promoting its nucleophilic attack on the sulphonium methyl group of the AdoMet cofactor. In contrast to the AdoMet-dependent protein methyltranferases of the classical type, which tend to bind their polypeptide substrates on top of the cofactor, it is noted from the Rubisco LSMT structure that the AdoMet seems to bind in a separate cleft, suggesting how a polypeptide substrate could be subjected to multiple rounds of methylation without having to be released from the enzyme. In contrast, SET7/9 is able to add only a single methyl group to its substrate. It has been demonstrated that association of SET domain and myotubularin-related proteins modulates growth control []. The SET domain-containing Drosophila melanogaster (Fruit fly) protein, enhancer of zeste, has a function in segment determination and the mammalian homologue may be involved in the regulation of gene transcription and chromatin structure. Histone lysine methylation is part of the histone code that regulated chromatin function and epigenetic control of gene function. Histone lysine methyltransferases (HMTase) differ both in their substrate specificity for the various acceptor lysines as well as in their product specificity for the number of methyl groups (one, two, or three) they transfer. With just one exception [], the HMTases belong to SET family that can be classified according to the sequences surrounding the SET domain [, ]. Structural studies on the human SET7/9, a mono-methylase, have revealed the molecular basis for the specificity of the enzyme for the histone-target and the roles of the invariant residues in the SET domain in determining the methylation specificities []. The pre-SET domain, as found in the SUV39 SET family, contains nine invariant cysteine residues that are grouped into two segments separated by a region of variable length. These 9 cysteines coordinate 3 zinc ions to form to form a triangular cluster, where each of the zinc ions is coordinated by 4 four cysteines to give a tetrahedral configuration. The function of this domain is structural, holding together 2 long segments of random coils. The C-terminal region including the post-SET domain is disordered when not interacting with a histone tail and in the absence of zinc. The three conserved cysteines in the post-SET domain form a zinc-binding site when coupled to a fourth conserved cysteine in the knot-like structure close to the SET domain active site []. The structured post-SET region brings in the C-terminal residues that participate in S-adenosylmethine-binding and histone tail interactions. The three conserved cysteine residues are essential for HMTase activity, as replacement with serine abolishes HMTase activity [], []. ; GO: 0005515 protein binding; PDB: 3TG5_A 3S7F_A 3RIB_B 3TG4_A 3S7J_A 3S7D_A 3S7B_A 3H6L_A 3SMT_A 3K5K_A ....

>COG2940 Proteins containing SET domain [General function prediction only]

Probab=99.74  E-value=5.3e-19  Score=165.56  Aligned_cols=145  Identities=35%  Similarity=0.667  Sum_probs=118.4

Q ss_pred             CCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEEeccccCCccc
Q psy7758          24 TRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLAR  103 (235)
Q Consensus        24 ~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~~gn~aR  103 (235)
                      .....+..+..+..+|+|+||.+.|++|++|.+|.|+++...++..+............+........++|+...|+.+|
T Consensus       328 ~~~~~~~~~~~~~~~~~g~fa~~~i~~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~r  407 (480)
T COG2940         328 KKRREPNVVQESEIKGYGVFALESIKKGEFIIEYHGEIIRRKEAREREENYDLLGNEFSFGLLEDKDKVRDSQKAGDVAR  407 (480)
T ss_pred             ccccchhhhhhhcccccceeehhhccchHHHHHhcCcccchHHHHhhhccccccccccchhhccccchhhhhhhcccccc
Confidence            33445667777789999999999999999999999999999888888776644333222222222377899999999999


Q ss_pred             cccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCC-------CCeEEecCCCCCceec
Q psy7758         104 FMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADND-------GMRRCMCGAASCSGFI  168 (235)
Q Consensus       104 fiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~-------~~~~C~Cg~~~C~g~~  168 (235)
                      |+||||.||+.......++...+.++|+|||.+||||+++|+...+...       ....|.|++..|++++
T Consensus       408 ~~nHS~~pN~~~~~~~~~g~~~~~~~~~rDI~~geEl~~dy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  479 (480)
T COG2940         408 FINHSCTPNCEASPIEVNGIFKISIYAIRDIKAGEELTYDYGPSLEDNRELKKLLEKRWGCACGEDRCSHTM  479 (480)
T ss_pred             eeecCCCCCcceecccccccceeeecccccchhhhhhccccccccccchhhhhhhhhhhccccCCCccCCCC
Confidence            9999999999987665555568999999999999999999999888755       4778999999999876

>KOG2589|consensus

Probab=99.61  E-value=8.5e-16  Score=135.10  Aligned_cols=123  Identities=23%  Similarity=0.335  Sum_probs=94.1

Q ss_pred             CCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEEeccccCCccccccCCCCCCcee
Q psy7758          36 GSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTA  115 (235)
Q Consensus        36 ~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~~gn~aRfiNHSC~PN~~~  115 (235)
                      ...|--|+|++.+.+|+-|...+|.|....+.+++........+++..+    ....-.+..+-.+++||||.|.|||.|
T Consensus       135 ~~~gAkivst~~w~~ndkIe~LvGcIaeLse~eE~~ll~~g~nDFSvmy----StRk~caqLwLGPaafINHDCrpnCkF  210 (453)
T KOG2589|consen  135 SQNGAKIVSTKSWSRNDKIELLVGCIAELSEAEERSLLRGGGNDFSVMY----STRKRCAQLWLGPAAFINHDCRPNCKF  210 (453)
T ss_pred             cCCCceEEeeccccCCccHHHhhhhhhhcChhhhHHHHhccCCceeeee----ecccchhhheeccHHhhcCCCCCCcee
Confidence            3579999999999999999999999987777777744444433332222    112233556778899999999999998


Q ss_pred             EEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCCCCeEEecCCCCCceec
Q psy7758         116 EKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFI  168 (235)
Q Consensus       116 ~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~~~~~C~Cg~~~C~g~~  168 (235)
                      +   ..|..++.|.++|||+||||||.-|+..+++.. +..|.|  ..|....
T Consensus       211 v---s~g~~tacvkvlRDIePGeEITcFYgs~fFG~~-N~~CeC--~TCER~g  257 (453)
T KOG2589|consen  211 V---STGRDTACVKVLRDIEPGEEITCFYGSGFFGEN-NEECEC--VTCERRG  257 (453)
T ss_pred             e---cCCCceeeeehhhcCCCCceeEEeecccccCCC-CceeEE--eeccccc
Confidence            4   334589999999999999999999999999988 777777  5665443

>KOG1081|consensus

Probab=99.51  E-value=3.1e-15  Score=138.83  Aligned_cols=151  Identities=44%  Similarity=0.858  Sum_probs=129.2

Q ss_pred             eEEcCCCCCCCCCCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCce
Q psy7758           3 YVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNY   82 (235)
Q Consensus         3 ~~eC~~~~C~~~~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~   82 (235)
                      +++|.|..|+++..|.|+.+.+...+.      +..    +|.++|.+|      .|++++..+...+...........+
T Consensus       289 ~~~~~p~~~~~~~~~~~~~~sk~~~~e------~~~----~~~~~~~k~------vg~~i~~~e~~~~~~~~~~~~~~~~  352 (463)
T KOG1081|consen  289 AYEVHPKVCSAEERCHNQQFSKESYPE------PQK----TAKADIRKG------VGEVIDDKECKARLQRVKESDLVDF  352 (463)
T ss_pred             hhhhcccccccccccccchhhhhcccc------cch----hhHHhhhcc------cCcccchhhheeehhhhhccchhhh
Confidence            567888899999999999988887755      222    899999998      8889999998888888887777888


Q ss_pred             eeeecCCCeEEeccccCCccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCCCCeEEecCCC
Q psy7758          83 YFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAA  162 (235)
Q Consensus        83 ~~~~~~~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~~~~~C~Cg~~  162 (235)
                      |+.....+..||+..++|.+||+||||.||+....|.+.+..++.++|.+.|++|||||++|...-...  .+.|.|++.
T Consensus       353 ~~~~~e~~~~id~~~~~n~sr~~nh~~~~~v~~~k~~~~~~t~~~~~a~~~i~~g~e~t~~~n~~~~~~--~~~~~~~~e  430 (463)
T KOG1081|consen  353 YMVFIQKDRIIDAGPKGNYSRFLNHSCQPNVETEKWQVIGDTRVGLFAPRQIEAGEELTFNYNGNCEGN--EKRCCCGSE  430 (463)
T ss_pred             hhhhhhcccccccccccchhhhhcccCCCceeechhheecccccccccccccccchhhhheeeccccCC--cceEeeccc
Confidence            877777666999999999999999999999999999999999999999999999999999998765543  578999888


Q ss_pred             CCceeccCC
Q psy7758         163 SCSGFIGAK  171 (235)
Q Consensus       163 ~C~g~~~~~  171 (235)
                      +|.++++..
T Consensus       431 ~~~~~~~k~  439 (463)
T KOG1081|consen  431 NCTETKGKK  439 (463)
T ss_pred             ccccCCccc
Confidence            887776654

>KOG2461|consensus

Probab=98.69  E-value=2.1e-08  Score=91.58  Aligned_cols=115  Identities=23%  Similarity=0.299  Sum_probs=82.9

Q ss_pred             CCCCEEEEEc--CCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecC-CCeEEecc--ccCC
Q psy7758          26 NYPPLEVFNT--GSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLD-NSRYIDAG--KKGN  100 (235)
Q Consensus        26 ~~~~lev~~s--~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~-~~~~iDa~--~~gn  100 (235)
                      ..+.|.|..+  +..|.||++...|.+|+.-+.|.|+++....      ....+......++..+ ...+||++  ...|
T Consensus        26 LP~~l~i~~Ssv~~~~lgV~s~~~i~~G~~FGP~~G~~~~~~~------~~~~n~~y~W~I~~~d~~~~~iDg~d~~~sN   99 (396)
T KOG2461|consen   26 LPPELRIKPSSVPVTGLGVWSNASILPGTSFGPFEGEIIASID------SKSANNRYMWEIFSSDNGYEYIDGTDEEHSN   99 (396)
T ss_pred             CCCceEeeccccCCccccccccccccCcccccCccCccccccc------cccccCcceEEEEeCCCceEEeccCChhhcc
Confidence            5678888888  5688999999999999999999999711110      0011111222222332 44789987  4789


Q ss_pred             ccccccCCCCC---CceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccC
Q psy7758         101 LARFMNHSCEP---NCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKAD  150 (235)
Q Consensus       101 ~aRfiNHSC~P---N~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~  150 (235)
                      +.||||-.+..   |...    ......|+++|+|+|.+||||.|+|+.++..
T Consensus       100 WmRYV~~Ar~~eeQNL~A----~Q~~~~Ifyrt~r~I~p~eELlVWY~~e~~~  148 (396)
T KOG2461|consen  100 WMRYVNSARSEEEQNLLA----FQIGENIFYRTIRDIRPNEELLVWYGSEYAE  148 (396)
T ss_pred             eeeeecccCChhhhhHHH----HhccCceEEEecccCCCCCeEEEEeccchHh
Confidence            99999988864   6543    2335789999999999999999999988743

>KOG1141|consensus

Probab=97.76  E-value=5.7e-06  Score=80.10  Aligned_cols=67  Identities=28%  Similarity=0.538  Sum_probs=60.2

Q ss_pred             eEEcCCCCCCC-CCCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHH
Q psy7758           3 YVECNPDSCPA-RTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRR   70 (235)
Q Consensus         3 ~~eC~~~~C~~-~~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~   70 (235)
                      +|||+. .|.| +.-|.||+++.+.+.+|.++.+..+|||++...+|..|.+|+.|.|.+++..-.+..
T Consensus       774 ~yEc~k-~ckc~~~~C~nrmvqhg~qvRlq~fkt~~kGWg~rclddi~~g~fVciy~g~~l~~~~sdks  841 (1262)
T KOG1141|consen  774 PYECLK-ACKCCGPDCLNRMVQHGYQVRLQRFKTIHKGWGRRCLDDITGGNFVCIYPGGALLHQISDKS  841 (1262)
T ss_pred             HHHHHH-hhccCcHHHHHHHhhcCceeEeeeccccccccceEeeeecCCceEEEEecchhhhhhhchhh
Confidence            589986 8986 579999999999999999999999999999999999999999999999887654443

>smart00570 AWS associated with SET domains

Probab=97.48  E-value=5.1e-05  Score=49.34  Aligned_cols=25  Identities=40%  Similarity=1.069  Sum_probs=22.2

Q ss_pred             ceEEcCCCCCCCCCCCCCccCCCCCC
Q psy7758           2 LYVECNPDSCPARTKCQNRDFETRNY   27 (235)
Q Consensus         2 ~~~eC~~~~C~~~~~C~N~~~~~~~~   27 (235)
                      |++|| |..|+||+.|+||.|+++++
T Consensus        27 l~~EC-~~~C~~G~~C~NqrFqk~~y   51 (51)
T smart00570       27 LLIEC-SSDCPCGSYCSNQRFQKRQY   51 (51)
T ss_pred             Hhhhc-CCCCCCCcCccCcccccCcC
Confidence            57899 57999999999999998864

subdomain of PRESET

>smart00508 PostSET Cysteine-rich motif following a subset of SET domains

Probab=96.44  E-value=0.0017  Score=36.19  Aligned_cols=18  Identities=44%  Similarity=1.261  Sum_probs=15.6

Q ss_pred             CeEEecCCCCCceeccCC
Q psy7758         154 MRRCMCGAASCSGFIGAK  171 (235)
Q Consensus       154 ~~~C~Cg~~~C~g~~~~~  171 (235)
                      .+.|.||+++|||++...
T Consensus         2 ~~~C~CGs~~CRG~l~~~   19 (26)
T smart00508        2 KQPCLCGAPNCRGFLGXX   19 (26)
T ss_pred             CeeeeCCCccccceeccc
Confidence            579999999999999654

>KOG2084|consensus

Probab=95.28  E-value=0.023  Score=52.51  Aligned_cols=44  Identities=27%  Similarity=0.468  Sum_probs=32.3

Q ss_pred             cccCCCCCCceeEEEEECCceEEEEEEccCCCCCC-eEEEecCCCccCC
Q psy7758         104 FMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGT-ELVFNYELQKADN  151 (235)
Q Consensus       104 fiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GE-Elt~~Y~~~~~~~  151 (235)
                      ++||||.||+..   ..+ .....+.+..++.+++ ||+++|....++.
T Consensus       208 ~~~hsC~pn~~~---~~~-~~~~~~~~~~~~~~~~~~l~~~y~~~~~~~  252 (482)
T KOG2084|consen  208 LFNHSCFPNISV---IFD-GRGLALLVPAGIDAGEEELTISYTDPLLST  252 (482)
T ss_pred             hcccCCCCCeEE---EEC-CceeEEEeecccCCCCCEEEEeecccccCH
Confidence            789999999983   233 3445566777777776 9999998877653

>KOG1337|consensus

Probab=92.90  E-value=0.085  Score=49.69  Aligned_cols=41  Identities=39%  Similarity=0.399  Sum_probs=31.5

Q ss_pred             ccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCC
Q psy7758         103 RFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYEL  146 (235)
Q Consensus       103 RfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~  146 (235)
                      -+.||++.+...   .+......+.+++.++|.+||||+++||.
T Consensus       238 D~~NH~~~~~~~---~~~~~d~~~~l~~~~~v~~geevfi~YG~  278 (472)
T KOG1337|consen  238 DLLNHSPEVIKA---GYNQEDEAVELVAERDVSAGEEVFINYGP  278 (472)
T ss_pred             HhhccCchhccc---cccCCCCcEEEEEeeeecCCCeEEEecCC
Confidence            467999999222   11222348999999999999999999987

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	235
3h6l_A	278	Histone-lysine N-methyltransferase SETD2; SET doma	3e-82
3ooi_A	232	Histone-lysine N-methyltransferase, H3 lysine-36 l	3e-81
3ope_A	222	Probable histone-lysine N-methyltransferase ASH1L;	3e-80
2w5y_A	192	Histone-lysine N-methyltransferase HRX; transcript	3e-67
1mvh_A	299	Cryptic LOCI regulator 4; lysine methyltransferase	5e-67
3bo5_A	290	Histone-lysine N-methyltransferase setmar; SET dom	4e-64
2r3a_A	300	Histone-lysine N-methyltransferase SUV39H2; histon	6e-62
3f9x_A	166	Histone-lysine N-methyltransferase SETD8; methyltr	3e-61
1ml9_A	302	Histone H3 methyltransferase DIM-5; adoMet-depende	1e-60
3hna_A	287	Histone-lysine N-methyltransferase, H3 lysine-9 sp	3e-57
3s8p_A	273	Histone-lysine N-methyltransferase SUV420H1; SET d	1e-37
1n3j_A	119	A612L, histone H3 lysine methyltransferase; beta b	3e-34
3rq4_A	247	Histone-lysine N-methyltransferase SUV420H2; suppr	1e-29
2f69_A	261	Histone-lysine N-methyltransferase, H3 lysine-4 sp	2e-26
2qpw_A	149	PR domain zinc finger protein 2; methyltransferase	3e-16
3ihx_A	152	PR domain zinc finger protein 10; PRDM10, methyltr	1e-15
3ep0_A	170	PR domain zinc finger protein 12; PR domain-contai	2e-14
3dal_A	196	PR domain zinc finger protein 1; methyltransferase	7e-13
3db5_A	151	PR domain zinc finger protein 4; methyltransferase	3e-12
3ray_A	237	PR domain-containing protein 11; structural genomi	6e-06
3qwp_A	429	SET and MYND domain-containing protein 3; SMYD3,SE	1e-05
3qww_A	433	SET and MYND domain-containing protein 2; methyltr	5e-05
3n71_A	490	Histone lysine methyltransferase SMYD1; heart deve	4e-04

>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Length = 232

 Score =  241 bits (618), Expect = 3e-81
 Identities = 94/168 (55%), Positives = 118/168 (70%), Gaps = 1/168 (0%)

Query: 2   LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
           L  EC+P  CPA  +CQN+ F  R YP +E+F T  RGWGL+  TD+K+G+FV EYVGE+
Sbjct: 66  LLYECHPTVCPAGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGEL 125

Query: 62  IDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS 121
           ID++E   R R    ++  N+Y L+LD  R IDAG KGN ARFMNH C+PNC  +KW+V+
Sbjct: 126 IDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVN 185

Query: 122 GDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIG 169
           GDTRVGLFAL D+ AGTEL FNY L+   N     C CGA +CSGF+G
Sbjct: 186 GDTRVGLFALSDIKAGTELTFNYNLECLGNGKT-VCKCGAPNCSGFLG 232

>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Length = 222

 Score =  238 bits (610), Expect = 3e-80
 Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 2/172 (1%)

Query: 2   LYVECNPDSCPARTKCQNRDFETRNYPP-LEVFNTGSRGWGLKALTDLKRGQFVVEYVGE 60
           ++ EC+P++CP   +C N+  +   +   LE F    +GWG++    LK GQF++EY+GE
Sbjct: 47  IFAECSPNTCPCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGE 106

Query: 61  MIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTV 120
           ++ ++E   R  +   N+  +Y   +LD+   ID+ + GN ARF+NHSC+PNC  +KW+V
Sbjct: 107 VVSEQEFRNRMIEQYHNHSDHYCL-NLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSV 165

Query: 121 SGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKK 172
           +G  R+GL+AL+D+PAGTEL ++Y     + +  + C CG   C G IG K 
Sbjct: 166 NGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGGKS 217

>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Length = 192

 Score =  204 bits (522), Expect = 3e-67
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%)

Query: 1   DLYVECNPDSCPARTKC---QNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEY 57
           ++ ++       +       + R  +  +   + V+ +   G GL    ++  G+ V+EY
Sbjct: 23  EVQLKSAR-RATSMDLPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEY 81

Query: 58  VGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEK 117
            G +I   + ++R +  D      Y F  +D+S  +DA   GN ARF+NHSCEPNC +  
Sbjct: 82  AGNVIRSIQTDKREKYYDSKGIGCYMF-RIDDSEVVDATMHGNAARFINHSCEPNCYSRV 140

Query: 118 WTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFI 168
             + G   + +FA+R +  G EL ++Y+    D      C CGA  C  F+
Sbjct: 141 INIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRKFL 191

>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Length = 299

 Score =  208 bits (530), Expect = 5e-67
 Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 21/189 (11%)

Query: 2   LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
           +  ECN   C    +C NR  +     PLE+F T  +GWG+++L     G F+  Y+GE+
Sbjct: 112 VIYECNS-FCSCSMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEV 170

Query: 62  IDQKELNRRRRDMDRNNDHNYYFLSL---DNSRYIDAGKKGNLARFMNHSCEPNCTAEKW 118
           I   E  +R ++ D +     + L +    +   +DA   G+++RF NHSC PN      
Sbjct: 171 ITSAEAAKRDKNYDDDGITYLFDLDMFDDASEYTVDAQNYGDVSRFFNHSCSPNIAIYSA 230

Query: 119 TVSGDT----RVGLFALRDVPAGTELVFNYELQKADND-------------GMRRCMCGA 161
             +        +  FA++D+    EL F+Y   K  +                R+C CG+
Sbjct: 231 VRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRISKLRRQCKCGS 290

Query: 162 ASCSGFIGA 170
           A+C G++  
Sbjct: 291 ANCRGWLFG 299

>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Length = 290

 Score =  200 bits (510), Expect = 4e-64
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 20/189 (10%)

Query: 2   LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
              ECN   C     C+NR  +       +VF T  +GWGL+ L  + +G+FV EY GE+
Sbjct: 101 PVFECNV-LCRCSDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEV 159

Query: 62  IDQKELNRRRRDMDRNNDH------NYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTA 115
           +   E+ RR     +++ +       + +       ++D    GN+ RF+NHSCEPN   
Sbjct: 160 LGFSEVQRRIHLQTKSDSNYIIAIREHVYNGQVMETFVDPTYIGNIGRFLNHSCEPNLLM 219

Query: 116 EKWTVSGDT-RVGLFALRDVPAGTELVFNYELQKADNDG------------MRRCMCGAA 162
               +     ++ LFA +D+    EL ++Y  +  +                + C CGA 
Sbjct: 220 IPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDHGKLRKPCYCGAK 279

Query: 163 SCSGFIGAK 171
           SC+ F+   
Sbjct: 280 SCTAFLPFD 288

>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Length = 300

 Score =  195 bits (496), Expect = 6e-62
 Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 20/186 (10%)

Query: 2   LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGS-RGWGLKALTDLKRGQFVVEYVGE 60
              ECN   C     C NR  +      L +F T + RGWG+K L  +KR  FV+EYVGE
Sbjct: 115 PIYECNSR-CQCGPDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGE 173

Query: 61  MIDQKELNRRRRDMDRNNDHNYYFLSLDNSRY-IDAGKKGNLARFMNHSCEPNCTAEKWT 119
           +I  +E  RR +  D       + L  ++  + +DA + GN++ F+NHSC+PN       
Sbjct: 174 VITSEEAERRGQFYDNKGITYLFDLDYESDEFTVDAARYGNVSHFVNHSCDPNLQVFNVF 233

Query: 120 VSGDT----RVGLFALRDVPAGTELVFNYELQKADND-------------GMRRCMCGAA 162
           +        R+ LF+ R + AG EL F+Y+++ + +                  C CGA 
Sbjct: 234 IDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDISSDSIDHSPAKKRVRTVCKCGAV 293

Query: 163 SCSGFI 168
           +C G++
Sbjct: 294 TCRGYL 299

>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 2bqz_A* Length = 166

 Score =  188 bits (480), Expect = 3e-61
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 8/144 (5%)

Query: 5   ECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQ 64
           E   +      K  +   E+     +++     +G G+ A     RG FVVEY G++I+ 
Sbjct: 11  ELQSEER----KRIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEI 66

Query: 65  KELNRRRRDMDRNN---DHNYYFLSLDNSRYIDAGKKGN-LARFMNHSCEPNCTAEKWTV 120
            +  +R     ++     + YYF  L  +  +DA ++ N L R +NHS   NC  +   +
Sbjct: 67  TDAKKREALYAQDPSTGCYMYYFQYLSKTYCVDATRETNRLGRLINHSKCGNCQTKLHDI 126

Query: 121 SGDTRVGLFALRDVPAGTELVFNY 144
            G   + L A RD+ AG EL+F+Y
Sbjct: 127 DGVPHLILIASRDIAAGEELLFDY 150

>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Length = 302

 Score =  192 bits (488), Expect = 1e-60
 Identities = 60/195 (30%), Positives = 86/195 (44%), Gaps = 29/195 (14%)

Query: 2   LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
              EC+   C     C NR  E     PL++F T  RGWG+K   ++KRGQFV  Y+GE+
Sbjct: 108 PIYECHQ-GCACSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEI 166

Query: 62  IDQKELNRRRRDMDRNNDHNYYFLSLDNSR--------------YIDAGKKGNLARFMNH 107
           I  +E +RRR +       + Y  +LD                  +D        RF+NH
Sbjct: 167 ITSEEADRRRAESTIARRKDVYLFALDKFSDPDSLDPLLAGQPLEVDGEYMSGPTRFINH 226

Query: 108 SCEPNCTAEKWTVSGDT----RVGLFALRDVPAGTELVFNYELQKADND----------G 153
           SC+PN                 + LFA++D+P GTEL F+Y       +           
Sbjct: 227 SCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISE 286

Query: 154 MRRCMCGAASCSGFI 168
           M +C+CG A C G++
Sbjct: 287 MTKCLCGTAKCRGYL 301

>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Length = 287

 Score =  182 bits (463), Expect = 3e-57
 Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 1   DLYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGE 60
            L  ECN  +C     C+NR  +      L+++ T   GWG+++L D+  G FV EYVGE
Sbjct: 121 PLIFECNH-ACSCWRNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGE 179

Query: 61  MIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTV 120
           +I   E + R  D    +  N           IDA   GN++RF+NH CEPN    +  +
Sbjct: 180 LISDSEADVREEDSYLFDLDNKD----GEVYCIDARFYGNVSRFINHHCEPNLVPVRVFM 235

Query: 121 SGD----TRVGLFALRDVPAGTELVFNYELQKADNDGMR-RCMCGAASCSG 166
           +       R+  F+ R + AG +L F+Y  +  D  G    C CG+  C  
Sbjct: 236 AHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPKCRH 286

>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273

 Score =  131 bits (330), Expect = 1e-37
 Identities = 38/185 (20%), Positives = 61/185 (32%), Gaps = 22/185 (11%)

Query: 2   LYVECNPDSCPARTKCQNRDFETRNYPPLEVFN--------------TGSRGWGLKALTD 47
              E        + K Q + F+   +  L +F               +   G  + A  +
Sbjct: 96  TSGEWARHYFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKE 155

Query: 48  LKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNH 107
            KR   +   VG + +  E+          ND +  +    ++R   A      A F+NH
Sbjct: 156 WKRNDKIELLVGCIAELSEIEENMLLRHGENDFSVMY----STRKNCAQLWLGPAAFINH 211

Query: 108 SCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGF 167
            C PNC   K+  +G     + ALRD+  G E+   Y       +    C C      G 
Sbjct: 212 DCRPNC---KFVSTGRDTACVKALRDIEPGEEISCYYGDGF-FGENNEFCECYTCERRGT 267

Query: 168 IGAKK 172
              K 
Sbjct: 268 GAFKS 272

>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119

 Score =  117 bits (296), Expect = 3e-34
 Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 28  PPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSL 87
             + V  +   G+G+ A    ++G+ V E +  +    +              +Y F S 
Sbjct: 4   DRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTAL--------EDYLF-SR 54

Query: 88  DNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
            N   +  G         NHS +PN        +G  R+ +F ++ +  G E+  +Y
Sbjct: 55  KNMSAMALG----FGAIFNHSKDPNA--RHELTAGLKRMRIFTIKPIAIGEEITISY 105

>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247

 Score =  110 bits (275), Expect = 1e-29
 Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 25/187 (13%)

Query: 2   LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGS--------------RGWGLKALTD 47
                      +R   Q    +T  Y  L  F   S               G  + +   
Sbjct: 68  TLGGWTARYFQSRGPRQEAALKTHVYRYLRAFLPESGFTILPCTRYSMETNGAKIVSTRA 127

Query: 48  LKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMNH 107
            K+ + +   VG + + +E       + R  ++++    + ++R   A      A F+NH
Sbjct: 128 WKKNEKLELLVGCIAELRE---ADEGLLRAGENDFSI--MYSTRKRSAQLWLGPAAFINH 182

Query: 108 SCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGA--ASCS 165
            C+PNC   K+  +      +  LRD+  G E+   Y            C C        
Sbjct: 183 DCKPNC---KFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKN-EHCECHTCERKGE 238

Query: 166 GFIGAKK 172
           G    + 
Sbjct: 239 GAFRTRP 245

>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Length = 261

 Score =  101 bits (253), Expect = 2e-26
 Identities = 31/150 (20%), Positives = 47/150 (31%), Gaps = 16/150 (10%)

Query: 5   ECNPDSCPARTKCQNR-DFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMID 63
             +  +    +      D        +      S G GL +   +     +  Y G  I 
Sbjct: 87  HFDKSTSSCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRIT 146

Query: 64  QKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKK--------GNLARFMNHSCEPNCTA 115
            +E++ R   +      N   LSLD    ID  +          +L    NHS  PNC  
Sbjct: 147 HQEVDSRDWAL------NGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIY 200

Query: 116 EKW-TVSGDTRVGLFALRDVPAGTELVFNY 144
           + +          +  LR V A  EL   Y
Sbjct: 201 DMFVHPRFGPIKCIRTLRAVEADEELTVAY 230

>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Length = 149

 Score = 72.4 bits (177), Expect = 3e-16
 Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 12/118 (10%)

Query: 30  LEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDN 89
           L          G+ A   + +G+    +VG+   + ++       +    +  +      
Sbjct: 33  LFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVKNNVYMWEVYYPNLGWMCIDAT 92

Query: 90  SRYIDAGKKGNLARFMNHSC---EPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
                   KGN  R++N +C   E N       +  +  +    L+ +  G EL+  Y
Sbjct: 93  DPE-----KGNWLRYVNWACSGEEQNLFP----LEINRAIYYKTLKPIAPGEELLVWY 141

>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Length = 152

 Score = 70.5 bits (172), Expect = 1e-15
 Identities = 16/120 (13%), Positives = 32/120 (26%), Gaps = 10/120 (8%)

Query: 31  EVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKEL-NRRRRDMDRNNDHNYYFLSLDN 89
            V        G+ +   + +        G ++   EL +         +  +     L  
Sbjct: 23  LVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRGSELKDCYIHLKVSLDKGDRKERDLHE 82

Query: 90  SRYIDA--GKKGNLARFMNHSC---EPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
             + +       N   F+  +    E N  A          V    +++V    EL   Y
Sbjct: 83  DLWFELSDETLCNWMMFVRPAQNHLEQNLVA----YQYGHHVYYTTIKNVEPKQELKVWY 138

>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Length = 170

 Score = 67.8 bits (165), Expect = 2e-14
 Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 12/116 (10%)

Query: 34  NTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYI 93
           +    G G+ + T +K G  +  + G +I  + ++  +   + N     +        +I
Sbjct: 35  SIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICK---NNNLMWEVFNEDGTVRYFI 91

Query: 94  DAGK--KGNLARFMNHSC---EPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
           DA +    +   ++  +    E N       V   T +   A+  +P   EL+  Y
Sbjct: 92  DASQEDHRSWMTYIKCARNEQEQNLEV----VQIGTSIFYKAIEMIPPDQELLVWY 143

>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Length = 196

 Score = 64.0 bits (155), Expect = 7e-13
 Identities = 24/152 (15%), Positives = 49/152 (32%), Gaps = 20/152 (13%)

Query: 2   LYVECNPDSCPARTKCQNRDFETRNYPP---LEVFNTGSRGWGLKALTDLKRGQFVVEYV 58
             V  +P    A      +   +   P     +         G+ +   + +G      +
Sbjct: 33  YIVNDHPWDSGADGGTSVQAEAS--LPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLI 90

Query: 59  GEMIDQKELNRRRRDMDRNNDHNYYFLSLDN-SRYIDA--GKKGNLARFMNHSC---EPN 112
           GE+     +       + N  + +   S      +ID    +K N  R++N +    E N
Sbjct: 91  GEIYTNDTV-----PKNANRKYFWRIYSRGELHHFIDGFNEEKSNWMRYVNPAHSPREQN 145

Query: 113 CTAEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
             A          +  + ++ +PA  EL+  Y
Sbjct: 146 LAA----CQNGMNIYFYTIKPIPANQELLVWY 173

>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Length = 151

 Score = 61.5 bits (149), Expect = 3e-12
 Identities = 18/114 (15%), Positives = 34/114 (29%), Gaps = 17/114 (14%)

Query: 39  GWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSR---YIDA 95
             G+     +         +G+     E+         +   N+ +    N      I  
Sbjct: 35  EVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWT-----DKAVNHIWKIYHNGVLEFCIIT 89

Query: 96  --GKKGNLARFMNHSC---EPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
               + N   F+  +    E N  A       D ++     +D+P   EL+F Y
Sbjct: 90  TDENECNWMMFVRKARNREEQNLVAYPH----DGKIFFCTSQDIPPENELLFYY 139

>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Length = 237

 Score = 45.2 bits (106), Expect = 6e-06
 Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 14/121 (11%)

Query: 28  PPLEVFNTGSRGWGLKALT-DLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLS 86
             +EV    S    ++ +   + +G     Y G++  Q +       +  + ++ Y  + 
Sbjct: 72  QGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSID 131

Query: 87  LDNSRYIDAGKKGNLARFMNHSC---EPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFN 143
             +        K N  R++  S    E N  A         R+   A RD+  G  L   
Sbjct: 132 GSD------ETKANWMRYVVISREEREQNLLA----FQHSERIYFRACRDIRPGEWLRVW 181

Query: 144 Y 144
           Y
Sbjct: 182 Y 182

>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429

 Score = 44.5 bits (104), Expect = 1e-05
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)

Query: 101 LARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
               +NHSC+PNC+     V     + L A+RD+  G EL   Y
Sbjct: 201 SISLLNHSCDPNCSI----VFNGPHLLLRAVRDIEVGEELTICY 240

>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433

 Score = 42.6 bits (99), Expect = 5e-05
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 4/44 (9%)

Query: 101 LARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
               MNHSC PN           T   + A++++  G E+  +Y
Sbjct: 201 DVALMNHSCCPNVIV----TYKGTLAEVRAVQEIHPGDEVFTSY 240

>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Length = 490

 Score = 39.9 bits (92), Expect = 4e-04
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 9/50 (18%)

Query: 104 FMNHSCEPNCT---------AEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
            +NH C PNCT         A K       R+ L AL  +  G EL  +Y
Sbjct: 203 LVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSY 252

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	235
3h6l_A	278	Histone-lysine N-methyltransferase SETD2; SET doma	100.0
3ooi_A	232	Histone-lysine N-methyltransferase, H3 lysine-36 l	100.0
3ope_A	222	Probable histone-lysine N-methyltransferase ASH1L;	100.0
3bo5_A	290	Histone-lysine N-methyltransferase setmar; SET dom	100.0
1mvh_A	299	Cryptic LOCI regulator 4; lysine methyltransferase	100.0
1ml9_A	302	Histone H3 methyltransferase DIM-5; adoMet-depende	100.0
3hna_A	287	Histone-lysine N-methyltransferase, H3 lysine-9 sp	100.0
2r3a_A	300	Histone-lysine N-methyltransferase SUV39H2; histon	100.0
2w5y_A	192	Histone-lysine N-methyltransferase HRX; transcript	100.0
3f9x_A	166	Histone-lysine N-methyltransferase SETD8; methyltr	100.0
1n3j_A	119	A612L, histone H3 lysine methyltransferase; beta b	99.96
2f69_A	261	Histone-lysine N-methyltransferase, H3 lysine-4 sp	99.96
3s8p_A	273	Histone-lysine N-methyltransferase SUV420H1; SET d	99.95
1h3i_A	293	Histone H3 lysine 4 specific methyltransferase; 2.	99.94
2qpw_A	149	PR domain zinc finger protein 2; methyltransferase	99.94
3rq4_A	247	Histone-lysine N-methyltransferase SUV420H2; suppr	99.93
3ep0_A	170	PR domain zinc finger protein 12; PR domain-contai	99.86
3db5_A	151	PR domain zinc finger protein 4; methyltransferase	99.85
3dal_A	196	PR domain zinc finger protein 1; methyltransferase	99.8
3ray_A	237	PR domain-containing protein 11; structural genomi	99.76
3ihx_A	152	PR domain zinc finger protein 10; PRDM10, methyltr	99.64
3n71_A	490	Histone lysine methyltransferase SMYD1; heart deve	99.54
3qwp_A	429	SET and MYND domain-containing protein 3; SMYD3,SE	99.46
3qww_A	433	SET and MYND domain-containing protein 2; methyltr	99.41
3qxy_A	449	N-lysine methyltransferase SETD6; epigenetics, pro	97.73
2h21_A	440	Ribulose-1,5 bisphosphate carboxylase/oxygenase; S	97.56
3smt_A	497	Histone-lysine N-methyltransferase SETD3; histone	97.38
2l43_A	88	N-teminal domain from histone H3.3, linker, PHD1 f	94.47
1xwh_A	66	Autoimmune regulator; PHD domain, Zn binding domai	93.98
2lri_C	66	Autoimmune regulator; Zn binding protein domain, a	93.32
1fp0_A	88	KAP-1 corepressor; PHD domain, C3HC4 type zinc bin	92.74
2puy_A	60	PHD finger protein 21A; PHD finger, histone CODE,	92.41
2l5u_A	61	Chromodomain-helicase-DNA-binding protein 4; CHD4,	91.53
2yql_A	56	PHD finger protein 21A; PHD domain, structural gen	91.31
1mm2_A	61	MI2-beta; PHD, zinc finger, protein scaffold, DNA	91.22
3smt_A	497	Histone-lysine N-methyltransferase SETD3; histone	90.96
2lbm_A	142	Transcriptional regulator ATRX; metal binding prot	90.3
3ql9_A	129	Transcriptional regulator ATRX; zinc finger, trans	88.79
3qxy_A	449	N-lysine methyltransferase SETD6; epigenetics, pro	87.19

>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}

Probab=100.00  E-value=1.4e-49  Score=338.04  Aligned_cols=167  Identities=56%  Similarity=1.079  Sum_probs=158.9

Q ss_pred             ceEEcCCCCCCCCCCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCc
Q psy7758           2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHN   81 (235)
Q Consensus         2 ~~~eC~~~~C~~~~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~   81 (235)
                      |+|||++..|+|++.|+|++++++.+++|+|+.++++||||||+++|++|++|++|.|++++.+++..+...+.......
T Consensus        66 ~~~EC~~~~C~c~~~C~Nr~~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~  145 (232)
T 3ooi_A           66 LLYECHPTVCPAGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITN  145 (232)
T ss_dssp             TTBCCCTTTCTTGGGCCCCHHHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCC
T ss_pred             ceeEeCCCCCCCCCCcCCccccCCCCccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCc
Confidence            68999998999999999999999999999999999999999999999999999999999999999999887777666778


Q ss_pred             eeeeecCCCeEEeccccCCccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCCCCeEEecCC
Q psy7758          82 YYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGA  161 (235)
Q Consensus        82 ~~~~~~~~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~~~~~C~Cg~  161 (235)
                      +|++.++.+.+|||+.+||++|||||||.||+.++.|.+++..++.|+|+|||++|||||+||+.++|+.. .|.|.||+
T Consensus       146 ~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~-~~~C~CGs  224 (232)
T 3ooi_A          146 FYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNG-KTVCKCGA  224 (232)
T ss_dssp             CCEEEEETTEEEEEEEEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCT-TCBCCCCC
T ss_pred             eeeeecCcceEEeccccccccccccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCCC-CcEeECCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999998866 89999999


Q ss_pred             CCCceecc
Q psy7758         162 ASCSGFIG  169 (235)
Q Consensus       162 ~~C~g~~~  169 (235)
                      ++|||+|+
T Consensus       225 ~~CrG~lG  232 (232)
T 3ooi_A          225 PNCSGFLG  232 (232)
T ss_dssp             TTCCSBCC
T ss_pred             CcCcCcCC
Confidence            99999985

>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}

Probab=100.00  E-value=1.2e-48  Score=330.47  Aligned_cols=172  Identities=40%  Similarity=0.881  Sum_probs=154.1

Q ss_pred             ceEEcCCCCCCCCCCCCCccCCCCCCC-CEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCC
Q psy7758           2 LYVECNPDSCPARTKCQNRDFETRNYP-PLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDH   80 (235)
Q Consensus         2 ~~~eC~~~~C~~~~~C~N~~~~~~~~~-~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~   80 (235)
                      |++||+|+.|+|++.|+||++|++.+. +|+|+.++++||||||+++|++|++|++|.|++++.+++..+....... ..
T Consensus        47 ~~~EC~~~~C~C~~~C~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~-~~  125 (222)
T 3ope_A           47 IFAECSPNTCPCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYHN-HS  125 (222)
T ss_dssp             GTBCCCTTTCTTTTSCSSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTSTT-CC
T ss_pred             eEeEeCCCCCcCCCCCCCceEeCCCccccEEEEEcCCCceEEEECceECCCCEEEEecceecCHHHHHHHHHHHhcc-cC
Confidence            679999989999999999999998765 5999999999999999999999999999999999999998886554433 24


Q ss_pred             ceeeeecCCCeEEeccccCCccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCCCCeEEecC
Q psy7758          81 NYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCG  160 (235)
Q Consensus        81 ~~~~~~~~~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~~~~~C~Cg  160 (235)
                      ..|++.++.+.+|||+.+||++|||||||.||+.++.|.+++..++.|+|+|||++|||||+||+.++|+....|.|.||
T Consensus       126 ~~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~~C~CG  205 (222)
T 3ope_A          126 DHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCG  205 (222)
T ss_dssp             SCCEEEEETTEEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCCSCCCBCCCC
T ss_pred             CeEEEecCCCEEEeCccccccceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCCcCCCEeeCC
Confidence            56888889999999999999999999999999999999899999999999999999999999999999987778999999


Q ss_pred             CCCCceeccCCCCC
Q psy7758         161 AASCSGFIGAKKAV  174 (235)
Q Consensus       161 ~~~C~g~~~~~~~~  174 (235)
                      +++|||+|++..+.
T Consensus       206 s~~Crg~i~~~~q~  219 (222)
T 3ope_A          206 FEKCRGIIGGKSQR  219 (222)
T ss_dssp             CTTCCSBCC-----
T ss_pred             CcCCCCccCCCCcc
Confidence            99999999997654

>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}

Probab=100.00  E-value=8.5e-44  Score=311.37  Aligned_cols=167  Identities=31%  Similarity=0.638  Sum_probs=145.0

Q ss_pred             ceEEcCCCCCCCCCCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCc
Q psy7758           2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHN   81 (235)
Q Consensus         2 ~~~eC~~~~C~~~~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~   81 (235)
                      ++|||++ .|+|++.|+||++|++.+.+|+|++++.+||||||+++|++|++|++|.|++++.++++++...+....  .
T Consensus       101 ~~~EC~~-~C~C~~~C~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~--~  177 (290)
T 3bo5_A          101 PVFECNV-LCRCSDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTKSD--S  177 (290)
T ss_dssp             CEECCCT-TCCSCTTCTTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCCSSC--C
T ss_pred             ceEeCCC-CCCCCCCCCCeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhcccC--C
Confidence            6899986 899999999999999999999999999999999999999999999999999999999988876543322  2


Q ss_pred             eeeeecCC--------CeEEeccccCCccccccCCCCCCceeEEEEECC-ceEEEEEEccCCCCCCeEEEecCCCccCC-
Q psy7758          82 YYFLSLDN--------SRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSG-DTRVGLFALRDVPAGTELVFNYELQKADN-  151 (235)
Q Consensus        82 ~~~~~~~~--------~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~-~~~~~i~A~rdI~~GEElt~~Y~~~~~~~-  151 (235)
                      .|++.+..        ..+|||+.+||++|||||||+||+.++.|.+++ ..++.|+|+|||++|||||+||+..+|.. 
T Consensus       178 ~Y~~~l~~~~~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~  257 (290)
T 3bo5_A          178 NYIIAIREHVYNGQVMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLT  257 (290)
T ss_dssp             CCCEEEEECC-----EEEEEEEEEEECGGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCS
T ss_pred             cceeeecccccCCccceeEEeeeecCCchheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCcccccc
Confidence            24444321        368999999999999999999999998777665 47999999999999999999999988753 


Q ss_pred             -----------CCCeEEecCCCCCceeccCC
Q psy7758         152 -----------DGMRRCMCGAASCSGFIGAK  171 (235)
Q Consensus       152 -----------~~~~~C~Cg~~~C~g~~~~~  171 (235)
                                 ...+.|+||+++|||+|+.+
T Consensus       258 ~~~~~~~~~~~~~~~~C~CGs~~CrG~l~~~  288 (290)
T 3bo5_A          258 VSASKERLDHGKLRKPCYCGAKSCTAFLPFD  288 (290)
T ss_dssp             SSEEEEEEECSSCCCBCCCCCTTCCSBCCCE
T ss_pred             ccccccccccCCCCccccCCCcCCCccCCCC
Confidence                       23689999999999999754

>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A

Probab=100.00  E-value=1.4e-43  Score=311.19  Aligned_cols=166  Identities=33%  Similarity=0.644  Sum_probs=130.1

Q ss_pred             ceEEcCCCCCCCCCCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCc
Q psy7758           2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHN   81 (235)
Q Consensus         2 ~~~eC~~~~C~~~~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~   81 (235)
                      ++|||++ .|+|++.|+||++|++.+.+|+|++++++||||||+++|++|++|++|.|++++.+++..+...+....  .
T Consensus       112 ~i~EC~~-~C~C~~~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~~~--~  188 (299)
T 1mvh_A          112 VIYECNS-FCSCSMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDG--I  188 (299)
T ss_dssp             EEECCCT-TSCSCTTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCS--C
T ss_pred             CeEeCCC-CCCCCCCcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhccC--c
Confidence            6899997 899999999999999999999999999999999999999999999999999999999998887665432  3


Q ss_pred             eeeeecC-----CCeEEeccccCCccccccCCCCCCceeEEEEEC----CceEEEEEEccCCCCCCeEEEecCCCccC--
Q psy7758          82 YYFLSLD-----NSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS----GDTRVGLFALRDVPAGTELVFNYELQKAD--  150 (235)
Q Consensus        82 ~~~~~~~-----~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~----~~~~~~i~A~rdI~~GEElt~~Y~~~~~~--  150 (235)
                      .|++.++     ..++|||+.+||++|||||||+||+.++.++.+    +..++.|+|+|||++|||||+||+..+|.  
T Consensus       189 ~Y~f~l~~~~~~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~  268 (299)
T 1mvh_A          189 TYLFDLDMFDDASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSP  268 (299)
T ss_dssp             CCEEEECSSCSSSCEEEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSC
T ss_pred             eEEEEecCCCCCccEEEeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCcccccc
Confidence            4666665     368999999999999999999999998765543    34799999999999999999999999882  


Q ss_pred             C-----------CCCeEEecCCCCCceeccC
Q psy7758         151 N-----------DGMRRCMCGAASCSGFIGA  170 (235)
Q Consensus       151 ~-----------~~~~~C~Cg~~~C~g~~~~  170 (235)
                      .           ...+.|+||+++|||+|.+
T Consensus       269 ~~~~~~~~~~~~k~~~~C~CGs~~Crg~l~g  299 (299)
T 1mvh_A          269 VQSQKSQQNRISKLRRQCKCGSANCRGWLFG  299 (299)
T ss_dssp             CC-----------------------------
T ss_pred             cccccccccccccCCcCcCCCCCCCccccCC
Confidence            1           1137999999999999864

>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*

Probab=100.00  E-value=1.1e-43  Score=312.50  Aligned_cols=167  Identities=36%  Similarity=0.721  Sum_probs=126.5

Q ss_pred             ceEEcCCCCCCCCCCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCc
Q psy7758           2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHN   81 (235)
Q Consensus         2 ~~~eC~~~~C~~~~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~   81 (235)
                      ++|||++ .|+|+..|+||++|++.+.+|+|++++.+||||||+++|++|++|+||.|++++.+++..+...+.......
T Consensus       108 ~i~EC~~-~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~~  186 (302)
T 1ml9_A          108 PIYECHQ-GCACSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKD  186 (302)
T ss_dssp             CEECCCT-TCSSCTTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHH
T ss_pred             CeEecCC-CCCCCCCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHHHhhhcCCc
Confidence            6899998 699999999999999999999999999999999999999999999999999999999998877654333345


Q ss_pred             eeeeecCC--------------CeEEeccccCCccccccCCCCCCceeEEEEEC----CceEEEEEEccCCCCCCeEEEe
Q psy7758          82 YYFLSLDN--------------SRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS----GDTRVGLFALRDVPAGTELVFN  143 (235)
Q Consensus        82 ~~~~~~~~--------------~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~----~~~~~~i~A~rdI~~GEElt~~  143 (235)
                      .|++.++.              .++|||+.+||++|||||||.||+.+..+..+    +..++.|+|+|||++|||||+|
T Consensus       187 ~Y~f~l~~~~~~~~~d~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~d  266 (302)
T 1ml9_A          187 VYLFALDKFSDPDSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFD  266 (302)
T ss_dssp             HHEEECCSSCCSSSSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEEC
T ss_pred             eEEEEeccccCcccccccccCCcEEEeCcccCCHHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEE
Confidence            57776653              68999999999999999999999988654322    2268999999999999999999


Q ss_pred             cCCCccCCC----------CCeEEecCCCCCceecc
Q psy7758         144 YELQKADND----------GMRRCMCGAASCSGFIG  169 (235)
Q Consensus       144 Y~~~~~~~~----------~~~~C~Cg~~~C~g~~~  169 (235)
                      |+..+|...          ..+.|+||+++|||+|.
T Consensus       267 Y~~~~~~~~~~~~~~~k~~~~~~C~CGs~~Crg~l~  302 (302)
T 1ml9_A          267 YVNGLTGLESDAHDPSKISEMTKCLCGTAKCRGYLW  302 (302)
T ss_dssp             TTC---------------------------------
T ss_pred             ECCCccccccccccccccCCCcEeeCCCCcCccccC
Confidence            999887642          24799999999999973

>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*

Probab=100.00  E-value=2.8e-43  Score=307.56  Aligned_cols=158  Identities=35%  Similarity=0.679  Sum_probs=138.4

Q ss_pred             CceEEcCCCCCCCCCCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCC
Q psy7758           1 DLYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDH   80 (235)
Q Consensus         1 ~~~~eC~~~~C~~~~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~   80 (235)
                      .++|||++ .|+|+..|+||++|++.+.+|+|++++++||||||+++|++|++|++|.|++++.+++..+.        .
T Consensus       121 ~~i~EC~~-~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r~--------~  191 (287)
T 3hna_A          121 PLIFECNH-ACSCWRNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVRE--------E  191 (287)
T ss_dssp             CCEECCCT-TSSSCTTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTCS--------C
T ss_pred             ceEEecCC-CCCCCCCCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhhc--------c
Confidence            37999987 79999999999999999999999999999999999999999999999999999998876542        2


Q ss_pred             ceeeeecCCC----eEEeccccCCccccccCCCCCCceeEEEEECC----ceEEEEEEccCCCCCCeEEEecCCCccCCC
Q psy7758          81 NYYFLSLDNS----RYIDAGKKGNLARFMNHSCEPNCTAEKWTVSG----DTRVGLFALRDVPAGTELVFNYELQKADND  152 (235)
Q Consensus        81 ~~~~~~~~~~----~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~----~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~  152 (235)
                      ..|++.++..    ++|||+.+||++|||||||.||+.++.++...    .++|.|+|+|||++|||||+||+..+|+..
T Consensus       192 ~~Y~f~l~~~~~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~  271 (287)
T 3hna_A          192 DSYLFDLDNKDGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIK  271 (287)
T ss_dssp             CTTEEESCCSSSSCEEEEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHH
T ss_pred             cceEEEeccCCCceEEEeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccC
Confidence            3466666543    68999999999999999999999987665543    369999999999999999999999887532


Q ss_pred             -CCeEEecCCCCCcee
Q psy7758         153 -GMRRCMCGAASCSGF  167 (235)
Q Consensus       153 -~~~~C~Cg~~~C~g~  167 (235)
                       ..|.|.||+++|||.
T Consensus       272 ~~~~~C~CGs~~CRgs  287 (287)
T 3hna_A          272 GKLFSCRCGSPKCRHS  287 (287)
T ss_dssp             TTTCCCCCCCTTCSCC
T ss_pred             CCcCEeeCCCCCCCCC
Confidence             479999999999984

>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.3e-42  Score=303.44  Aligned_cols=165  Identities=36%  Similarity=0.718  Sum_probs=141.4

Q ss_pred             ceEEcCCCCCCCCCCCCCccCCCCCCCCEEEEEcC-CCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCC
Q psy7758           2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTG-SRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDH   80 (235)
Q Consensus         2 ~~~eC~~~~C~~~~~C~N~~~~~~~~~~lev~~s~-~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~   80 (235)
                      ++|||++ .|+|++.|+||++|++.+.+|+|+++. ++||||||+++|++|++|++|.|++++.+++..+...+....  
T Consensus       115 ~i~EC~~-~C~C~~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~~~--  191 (300)
T 2r3a_A          115 PIYECNS-RCQCGPDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKG--  191 (300)
T ss_dssp             CEECCCT-TSSCCTTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCHHH--
T ss_pred             cEEeCCC-CCCCCCcCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhhcc--
Confidence            6899986 899999999999999999999999985 799999999999999999999999999999988876554322  


Q ss_pred             ceeeeecC---CCeEEeccccCCccccccCCCCCCceeEEEEEC----CceEEEEEEccCCCCCCeEEEecCCCccCC--
Q psy7758          81 NYYFLSLD---NSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVS----GDTRVGLFALRDVPAGTELVFNYELQKADN--  151 (235)
Q Consensus        81 ~~~~~~~~---~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~----~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~--  151 (235)
                      ..|++.++   ..++|||+.+||++|||||||+||+.+..+.++    +..++.|+|+|||++|||||+||+......  
T Consensus       192 ~~Y~f~l~~~~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~  271 (300)
T 2r3a_A          192 ITYLFDLDYESDEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDIS  271 (300)
T ss_dssp             HHTEEECCSSCSSEEEECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSSCC---
T ss_pred             ccEEEEeecCCceEEEecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCcccccc
Confidence            23555554   568899999999999999999999998777654    347999999999999999999998774321  


Q ss_pred             -----------CCCeEEecCCCCCceecc
Q psy7758         152 -----------DGMRRCMCGAASCSGFIG  169 (235)
Q Consensus       152 -----------~~~~~C~Cg~~~C~g~~~  169 (235)
                                 ...+.|+||+++|||+|.
T Consensus       272 ~~~~d~~~~~~~~~~~C~CGs~~Crg~ln  300 (300)
T 2r3a_A          272 SDSIDHSPAKKRVRTVCKCGAVTCRGYLN  300 (300)
T ss_dssp             -----------CCCCBCCCCCTTCCSBCC
T ss_pred             ccccccccccccCCCEeeCCCccccccCc
Confidence                       125899999999999973

>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*

Probab=100.00  E-value=1.3e-40  Score=275.11  Aligned_cols=153  Identities=30%  Similarity=0.640  Sum_probs=129.4

Q ss_pred             CCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEEec
Q psy7758          16 KCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDA   95 (235)
Q Consensus        16 ~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~iDa   95 (235)
                      .|+++.++++...+|+|++++++||||||+++|++|++|++|.|++++..++..+...+..... ..|++.++...+|||
T Consensus        40 ~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~-~~Y~f~l~~~~~IDa  118 (192)
T 2w5y_A           40 PMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGI-GCYMFRIDDSEVVDA  118 (192)
T ss_dssp             HHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHTC-CCCEEECSSSEEEEC
T ss_pred             chhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcCC-ceeeeeecCceEEEC
Confidence            4555556666678999999999999999999999999999999999999888877665544332 357788888999999


Q ss_pred             cccCCccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCCCCeEEecCCCCCceecc
Q psy7758          96 GKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIG  169 (235)
Q Consensus        96 ~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~~~~~C~Cg~~~C~g~~~  169 (235)
                      +.+||++|||||||.||+.+..+.+++..++.|+|+|||++|||||++|+..+|.....|.|.||+++|+|+|.
T Consensus       119 ~~~Gn~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~~~C~Cgs~~Crg~ln  192 (192)
T 2w5y_A          119 TMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRKFLN  192 (192)
T ss_dssp             TTTCCGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-------CCBCCCCCTTCCSBCC
T ss_pred             ccccChhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcCCCCceeECCCCCCcCcCC
Confidence            99999999999999999999888888889999999999999999999999999987678999999999999973

>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*

Probab=100.00  E-value=5e-35  Score=236.21  Aligned_cols=133  Identities=29%  Similarity=0.500  Sum_probs=117.2

Q ss_pred             CccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCC---CceeeeecCCCeEEec
Q psy7758          19 NRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNND---HNYYFLSLDNSRYIDA   95 (235)
Q Consensus        19 N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~---~~~~~~~~~~~~~iDa   95 (235)
                      +++++++...+|+|+.++++||||||+++|++|++|++|.|++++..++..+...+.....   ..+++..++...+||+
T Consensus        21 ~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~iDa  100 (166)
T 3f9x_A           21 DELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYLSKTYCVDA  100 (166)
T ss_dssp             HHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEEETTEEEEEEC
T ss_pred             HHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEecCCCCeEEec
Confidence            4556778889999999999999999999999999999999999999999998877655332   2344445778899999


Q ss_pred             ccc-CCccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCC
Q psy7758          96 GKK-GNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADN  151 (235)
Q Consensus        96 ~~~-gn~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~  151 (235)
                      +.. ||++|||||||.|||.+..+.+++..++.|+|+|||++|||||+||+.+++..
T Consensus       101 ~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~  157 (166)
T 3f9x_A          101 TRETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSKAS  157 (166)
T ss_dssp             CSCCSCSGGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCHHH
T ss_pred             hhcCCChhheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChhhH
Confidence            996 99999999999999999988888889999999999999999999999987653

>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*

Probab=99.96  E-value=1.6e-30  Score=199.10  Aligned_cols=111  Identities=20%  Similarity=0.305  Sum_probs=96.8

Q ss_pred             CCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEEeccccCCcccccc
Q psy7758          27 YPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMN  106 (235)
Q Consensus        27 ~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~~gn~aRfiN  106 (235)
                      .++++|+.|+++||||||+++|++|++|++|.|++++.+++...         ...|.+.++.    |+...++++||||
T Consensus         3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~~---------~~~y~f~~~~----d~~~~~~~~~~~N   69 (119)
T 1n3j_A            3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTA---------LEDYLFSRKN----MSAMALGFGAIFN   69 (119)
T ss_dssp             CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHHH---------SCSEEEEETT----EEEEESSSHHHHH
T ss_pred             CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhhc---------cCCeEEEeCC----ccccccCceeeec
Confidence            47899999999999999999999999999999999998876651         2236666655    7888999999999


Q ss_pred             CCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCC
Q psy7758         107 HSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADND  152 (235)
Q Consensus       107 HSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~  152 (235)
                      |||.|||.+..  ..+..++.++|+|||++|||||++|+..+|...
T Consensus        70 Hsc~pN~~~~~--~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~r  113 (119)
T 1n3j_A           70 HSKDPNARHEL--TAGLKRMRIFTIKPIAIGEEITISYGDDYWLSR  113 (119)
T ss_dssp             SCSSCCCEEEE--CSSSSCEEEEECSCBCSSEEECCCCCCCCCCCC
T ss_pred             cCCCCCeeEEE--ECCCeEEEEEEccccCCCCEEEEecCchhhcCc
Confidence            99999999854  455679999999999999999999999999865

>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*

Probab=99.96  E-value=1.4e-29  Score=218.09  Aligned_cols=141  Identities=21%  Similarity=0.229  Sum_probs=112.4

Q ss_pred             ceEEcCCCCCCCCCCCCCccCCCC-CCCCEEEEEcCCC--ceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCC
Q psy7758           2 LYVECNPDSCPARTKCQNRDFETR-NYPPLEVFNTGSR--GWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNN   78 (235)
Q Consensus         2 ~~~eC~~~~C~~~~~C~N~~~~~~-~~~~lev~~s~~~--G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~   78 (235)
                      .+|+|++....  -.|.|..+... ....++|++|+.+  ||||||+++|++|++|++|.|++++..++..+...+.   
T Consensus        84 ~~~~~d~~~~~--~i~~~~~~~~~~~~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~~---  158 (261)
T 2f69_A           84 SVYHFDKSTSS--CISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN---  158 (261)
T ss_dssp             CEECCCCCCSS--CSCSCTTSCCHHHHTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGGC---
T ss_pred             ceEecCcccCc--ceeCccccCCcccCceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhhc---
Confidence            57899874332  23666655433 2467999999765  9999999999999999999999999999887654442   


Q ss_pred             CCceeeeecCCCeEEecc--------ccCCccccccCCCCCCceeEEEEECCceEE-EEEEccCCCCCCeEEEecCCCcc
Q psy7758          79 DHNYYFLSLDNSRYIDAG--------KKGNLARFMNHSCEPNCTAEKWTVSGDTRV-GLFALRDVPAGTELVFNYELQKA  149 (235)
Q Consensus        79 ~~~~~~~~~~~~~~iDa~--------~~gn~aRfiNHSC~PN~~~~~~~~~~~~~~-~i~A~rdI~~GEElt~~Y~~~~~  149 (235)
                         .+.+.++...+||+.        ..||++|||||||.|||.+..+...+..++ .|+|+|||++|||||+||+.++.
T Consensus       159 ---~~~f~l~~~~~IDa~~~~~~~~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~  235 (261)
T 2f69_A          159 ---GNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS  235 (261)
T ss_dssp             ---SSCEECSSSCEEECCTTTTSTTTCCSCCGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSC
T ss_pred             ---cceeeecCCeEEEccccccccccccccceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCccc
Confidence               235688889999995        499999999999999999987643332344 99999999999999999998775


Q ss_pred             C
Q psy7758         150 D  150 (235)
Q Consensus       150 ~  150 (235)
                      .
T Consensus       236 ~  236 (261)
T 2f69_A          236 P  236 (261)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}

Probab=99.95  E-value=1.2e-29  Score=218.49  Aligned_cols=135  Identities=21%  Similarity=0.293  Sum_probs=103.7

Q ss_pred             CCEEEEEcC-----CCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEEeccccCCcc
Q psy7758          28 PPLEVFNTG-----SRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLA  102 (235)
Q Consensus        28 ~~lev~~s~-----~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~~gn~a  102 (235)
                      .+++|..+.     ++||||||+++|++|++|.+|.|+++...+.++...  .......+.+.....  ..+++.+||++
T Consensus       131 ~gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~~--~~~~~~dF~i~~s~~--~~~a~~~g~~a  206 (273)
T 3s8p_A          131 SGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENML--LRHGENDFSVMYSTR--KNCAQLWLGPA  206 (273)
T ss_dssp             GCEEEEEECCCTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHHH--CCTTTSCTTEEEETT--TTEEEEEESGG
T ss_pred             CCceEEeccceeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHHH--hhhcccccceecccc--ccccceecchH
Confidence            467777764     499999999999999999999999976655544322  122222222222111  13477899999


Q ss_pred             ccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCCCCeEEecCCCCCceeccC
Q psy7758         103 RFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGA  170 (235)
Q Consensus       103 RfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~~~~~C~Cg~~~C~g~~~~  170 (235)
                      |||||||.|||.+.   ..+..++.|+|+|||++|||||++|+..+|+.. .|.|.|++++|+|..+.
T Consensus       207 rfiNHSC~PN~~~~---~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~~-~f~C~C~~c~crG~g~f  270 (273)
T 3s8p_A          207 AFINHDCRPNCKFV---STGRDTACVKALRDIEPGEEISCYYGDGFFGEN-NEFCECYTCERRGTGAF  270 (273)
T ss_dssp             GGCEECSSCSEEEE---EEETTEEEEEESSCBCTTCBCEECCCTTTTSGG-GTTCCCHHHHHHTCGGG
T ss_pred             HhhCCCCCCCeEEE---EcCCCEEEEEECceeCCCCEEEEecCchhcCCC-CeEEECCCCcCCCCCCC
Confidence            99999999999863   233468999999999999999999999999876 89999999999998654

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A

Probab=99.94  E-value=3.9e-27  Score=206.13  Aligned_cols=118  Identities=24%  Similarity=0.264  Sum_probs=100.2

Q ss_pred             CCCEEEEEcCCCc--eEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEEec--------c
Q psy7758          27 YPPLEVFNTGSRG--WGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDA--------G   96 (235)
Q Consensus        27 ~~~lev~~s~~~G--~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~iDa--------~   96 (235)
                      .+.++|++|+.+|  |||||+++|++|++|++|.|++++..++..+.....      .+.+.++...+||+        +
T Consensus       162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~~------~~~~~l~~~~~iDa~~~~~~~~~  235 (293)
T 1h3i_A          162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN------GNTLSLDEETVIDVPEPYNHVSK  235 (293)
T ss_dssp             HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGGC------TTEEECSSSCEEECCTTTTSTTT
T ss_pred             ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhcc------cCEEecCCCEEEeCcccccccce
Confidence            3579999997655  999999999999999999999999999888754432      24578889999999        7


Q ss_pred             ccCCccccccCCCCCCceeEEEEECCceEE-EEEEccCCCCCCeEEEecCCCccC
Q psy7758          97 KKGNLARFMNHSCEPNCTAEKWTVSGDTRV-GLFALRDVPAGTELVFNYELQKAD  150 (235)
Q Consensus        97 ~~gn~aRfiNHSC~PN~~~~~~~~~~~~~~-~i~A~rdI~~GEElt~~Y~~~~~~  150 (235)
                      ..||++|||||||.|||.++.+......++ .|+|+|||++|||||++|+.+..+
T Consensus       236 ~~gn~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~~~  290 (293)
T 1h3i_A          236 YCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSP  290 (293)
T ss_dssp             CCSCCGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTBCC
T ss_pred             eeccceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCCCC
Confidence            799999999999999999987644443554 899999999999999999987654

>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*

Probab=99.94  E-value=6.3e-27  Score=185.72  Aligned_cols=112  Identities=21%  Similarity=0.347  Sum_probs=92.8

Q ss_pred             CCCCCEEEEEcC--CCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeec---CC-CeEEeccc-
Q psy7758          25 RNYPPLEVFNTG--SRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSL---DN-SRYIDAGK-   97 (235)
Q Consensus        25 ~~~~~lev~~s~--~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~---~~-~~~iDa~~-   97 (235)
                      .....|+|+.|.  ++||||||+++|++|++|++|.|++++.+++.           ...|++.+   +. .++|||+. 
T Consensus        26 ~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~-----------~~~Y~f~i~~~~~~~~~IDa~~~   94 (149)
T 2qpw_A           26 GLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK-----------NNVYMWEVYYPNLGWMCIDATDP   94 (149)
T ss_dssp             TCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC-----------CSSSEEEEEETTTEEEEEECSSG
T ss_pred             CCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc-----------cCceEEEEecCCCeeEEEeCCCC
Confidence            456789999995  67999999999999999999999999876531           12355554   22 35799997 


Q ss_pred             -cCCccccccCCCCC---CceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCC
Q psy7758          98 -KGNLARFMNHSCEP---NCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADN  151 (235)
Q Consensus        98 -~gn~aRfiNHSC~P---N~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~  151 (235)
                       .||++|||||||.|   |+....  .  ..+|+++|+|||++|||||+||+..+++.
T Consensus        95 ~~gn~~RfINhSc~p~eqNl~~~~--~--~~~I~~~A~RdI~~GEEL~~dY~~~~~~~  148 (149)
T 2qpw_A           95 EKGNWLRYVNWACSGEEQNLFPLE--I--NRAIYYKTLKPIAPGEELLVWYNGEDNPE  148 (149)
T ss_dssp             GGSCGGGGCEECBTTBTCCEEEEE--E--TTEEEEEESSCBCTTCBCEECCCCCCCCC
T ss_pred             CCCcceeeeeccCChhhcCEEEEE--E--CCEEEEEEccCCCCCCEEEEccCCccCCC
Confidence             99999999999999   887632  2  47999999999999999999999998763

>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}

Probab=99.93  E-value=6.1e-27  Score=199.51  Aligned_cols=127  Identities=19%  Similarity=0.305  Sum_probs=94.7

Q ss_pred             CCEEEEEc-----CCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEEeccccCCcc
Q psy7758          28 PPLEVFNT-----GSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLA  102 (235)
Q Consensus        28 ~~lev~~s-----~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~~gn~a  102 (235)
                      .+++|..+     .++|+||||+++|++|++|.+|.|+++...+.+.+.   .......+.+....  ...++..+++++
T Consensus       103 ~g~eV~~~~Ry~~~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~---~~~~~n~f~i~~~~--~~~~~~l~~~~a  177 (247)
T 3rq4_A          103 SGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGL---LRAGENDFSIMYST--RKRSAQLWLGPA  177 (247)
T ss_dssp             GCEEEEECCCCTTCSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGG---CCTTTSCTTEEEET--TTTEEEEEESGG
T ss_pred             CCcEEEeeeeeeecCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHh---hhccCCcEEEEecC--Ccccceeecchh
Confidence            46777775     478999999999999999999999998544333311   11111222222221  124677889999


Q ss_pred             ccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCCCCeEEecCCCC
Q psy7758         103 RFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAAS  163 (235)
Q Consensus       103 RfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~~~~~C~Cg~~~  163 (235)
                      |||||||.|||.+..  . +..++.|+|+|||++|||||++|+..+|+.. +|.|.|+++.
T Consensus       178 r~iNHSC~PN~~~~~--~-~~~~i~v~A~rdI~~GEElt~~Y~~~~~~~~-~f~C~C~~C~  234 (247)
T 3rq4_A          178 AFINHDCKPNCKFVP--A-DGNAACVKVLRDIEPGDEVTCFYGEGFFGEK-NEHCECHTCE  234 (247)
T ss_dssp             GGCEECSSCSEEEEE--E-TTTEEEEEESSCBCTTCBCEECCCTTSSSGG-GTTCCCHHHH
T ss_pred             hhcCCCCCCCEEEEE--e-CCCEEEEEECCcCCCCCEEEEecCchhcCCC-CCEEECCCCC
Confidence            999999999997643  2 3468999999999999999999999999866 7889886543

>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}

Probab=99.86  E-value=3.3e-21  Score=155.65  Aligned_cols=116  Identities=16%  Similarity=0.234  Sum_probs=80.9

Q ss_pred             CCCCCEEEEEc--CCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeec--CCC---eEEeccc
Q psy7758          25 RNYPPLEVFNT--GSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSL--DNS---RYIDAGK   97 (235)
Q Consensus        25 ~~~~~lev~~s--~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~--~~~---~~iDa~~   97 (235)
                      ...+.|+|+.|  ++.|+||||+++|++|+.+++|.|++++.+++...     .   ...|++.+  .++   ++||+..
T Consensus        24 sLP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~-----~---~~~y~w~i~~~~G~~~~~IDa~~   95 (170)
T 3ep0_A           24 VLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDIC-----K---NNNLMWEVFNEDGTVRYFIDASQ   95 (170)
T ss_dssp             SCCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC------------------CEEEEECTTSSEEEEEECC-
T ss_pred             CCCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhccc-----c---CCceEEEEecCCCcEEEEEECCC
Confidence            34578999999  55699999999999999999999999998765431     1   12233333  222   5899997


Q ss_pred             --cCCccccccCCCC---CCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCC
Q psy7758          98 --KGNLARFMNHSCE---PNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADND  152 (235)
Q Consensus        98 --~gn~aRfiNHSC~---PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~  152 (235)
                        .+|++|||||+|.   +|+....  .  ..+|+++|+|||.+||||+++|+..|....
T Consensus        96 e~~~NWmR~Vn~A~~~~eqNl~a~q--~--~~~I~~~a~RdI~pGeELlvwYg~~y~~~l  151 (170)
T 3ep0_A           96 EDHRSWMTYIKCARNEQEQNLEVVQ--I--GTSIFYKAIEMIPPDQELLVWYGNSHNTFL  151 (170)
T ss_dssp             -----GGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECC------
T ss_pred             CCCcceeeeEEecCCcccCCeeeEE--E--CCEEEEEECcCcCCCCEEEEeeCHHHHHHc
Confidence              7999999999996   7876532  2  469999999999999999999999997654

>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}

Probab=99.85  E-value=5.6e-21  Score=151.85  Aligned_cols=120  Identities=16%  Similarity=0.139  Sum_probs=80.6

Q ss_pred             CCCCEEEEEc-CCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCC-CeEEeccc--cCCc
Q psy7758          26 NYPPLEVFNT-GSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDN-SRYIDAGK--KGNL  101 (235)
Q Consensus        26 ~~~~lev~~s-~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~iDa~~--~gn~  101 (235)
                      ....|+|+.| +++|+||||+++|++|+.+++|.|++++.+++..+.   ..+....+.++..+. .++||+..  .+|+
T Consensus        21 lP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~---~~~~~y~w~i~~~~~~~~~iD~~~~~~~NW   97 (151)
T 3db5_A           21 LPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWT---DKAVNHIWKIYHNGVLEFCIITTDENECNW   97 (151)
T ss_dssp             CCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC--------------CCSEEEEEETTEEEEEEECCCTTTSCG
T ss_pred             CCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhccc---ccCCCceEEEEeCCCEEEEEECcCCCCCcc
Confidence            4567999997 679999999999999999999999999998876542   111111111222221 25799987  5999


Q ss_pred             cccccCCCCC---CceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCC
Q psy7758         102 ARFMNHSCEP---NCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADND  152 (235)
Q Consensus       102 aRfiNHSC~P---N~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~  152 (235)
                      +|||||+|.+   |+....  .  ..+|+++|+|||.+||||+++|+.+|+...
T Consensus        98 mR~Vn~A~~~~eqNl~a~q--~--~~~I~~~a~rdI~pGeELlv~Yg~~y~~~l  147 (151)
T 3db5_A           98 MMFVRKARNREEQNLVAYP--H--DGKIFFCTSQDIPPENELLFYYSRDYAQQI  147 (151)
T ss_dssp             GGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECC------
T ss_pred             eeEEEecCCcccCceEEEE--E--CCEEEEEEccccCCCCEEEEecCHHHHHHh
Confidence            9999999965   877633  2  478999999999999999999999997644

>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}

Probab=99.80  E-value=3.4e-20  Score=152.66  Aligned_cols=115  Identities=18%  Similarity=0.266  Sum_probs=90.1

Q ss_pred             CCCCEEEEEcC--CCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeec--CC--CeEEeccc--
Q psy7758          26 NYPPLEVFNTG--SRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSL--DN--SRYIDAGK--   97 (235)
Q Consensus        26 ~~~~lev~~s~--~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~--~~--~~~iDa~~--   97 (235)
                      ....|+|+.|.  ++|+||||+++|++|+.+++|.|++++.+++...     .   ...|++.+  ++  ..+||+..  
T Consensus        56 LP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~-----~---~~~y~w~i~~~g~~~~~IDas~e~  127 (196)
T 3dal_A           56 LPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKN-----A---NRKYFWRIYSRGELHHFIDGFNEE  127 (196)
T ss_dssp             CCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC-----------CCTTEEEEEETTEEEEEEECCCTT
T ss_pred             CCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhc-----c---CCcceeeeccCCCEEEEEECCCCC
Confidence            45789999994  5999999999999999999999999998754211     1   12233333  22  26899986  


Q ss_pred             cCCccccccCCCC---CCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCC
Q psy7758          98 KGNLARFMNHSCE---PNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADND  152 (235)
Q Consensus        98 ~gn~aRfiNHSC~---PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~  152 (235)
                      .+|++|||||+|.   +|+....  .  ..+|+++|+|||.+||||+++|+.+|+...
T Consensus       128 ~gNWmRfVn~A~~~~eqNl~a~q--~--~~~I~y~a~RdI~pGeELlvwYg~~Y~~~l  181 (196)
T 3dal_A          128 KSNWMRYVNPAHSPREQNLAACQ--N--GMNIYFYTIKPIPANQELLVWYCRDFAERL  181 (196)
T ss_dssp             SSCGGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECHHHHHHT
T ss_pred             CCceEEeEEecCCcccCCcEEEE--E--CCEEEEEECcccCCCCEEEEecCHHHHHHc
Confidence            8999999999996   6876532  2  478999999999999999999999886533

>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}

Probab=99.76  E-value=7.8e-19  Score=147.72  Aligned_cols=135  Identities=19%  Similarity=0.202  Sum_probs=88.9

Q ss_pred             CCCCEEEEEcCCCceEEEEc-eeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCC--CeEEeccc--cCC
Q psy7758          26 NYPPLEVFNTGSRGWGLKAL-TDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDN--SRYIDAGK--KGN  100 (235)
Q Consensus        26 ~~~~lev~~s~~~G~GlfA~-~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~~iDa~~--~gn  100 (235)
                      ....|+|+.|...|.|||+. +.|++|+.+++|.|++++..++.         . ...|.+..+.  ..+||+..  .+|
T Consensus        70 LP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~---------~-~y~wei~~~~g~~~~IDgsde~~gN  139 (237)
T 3ray_A           70 IPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA---------G-FFSWLIVDKNNRYKSIDGSDETKAN  139 (237)
T ss_dssp             CCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC---------------CCEEEEECTTSCEEEEECCCTTTSC
T ss_pred             CCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc---------c-cceEEEEcCCCcEEEEecCCCCCCc
Confidence            34579999999999999987 89999999999999999875431         1 1122222222  34899997  799


Q ss_pred             ccccccCCCC---CCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCCCCeEEecCCCCCceeccCCCCCCCC
Q psy7758         101 LARFMNHSCE---PNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPT  177 (235)
Q Consensus       101 ~aRfiNHSC~---PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~~~~~C~Cg~~~C~g~~~~~~~~~~~  177 (235)
                      ++|||||+|.   +|+....  .  ..+|+++|+|||.+||||+++|+.+|+.   .+...|++.-|+...++.++.+.+
T Consensus       140 WmRfVn~Ar~~~EqNL~A~q--~--~~~Iyy~a~RdI~pGeELlVwYg~~Y~~---~l~~~~~~~~~~~~~~~~k~~~~~  212 (237)
T 3ray_A          140 WMRYVVISREEREQNLLAFQ--H--SERIYFRACRDIRPGEWLRVWYSEDYMK---RLHSMSQETIHRNLARGEKRLQRE  212 (237)
T ss_dssp             GGGGCEECCCTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECHHHHH---HHCC--------------------
T ss_pred             ceeEEEcCCCcccccceeEE--e--CCEEEEEEccccCCCCEEEEeeCHHHHH---Hhcccccchhcccccchhhccccc
Confidence            9999999996   5766532  2  4789999999999999999999999987   456677778888887777665554

>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}

Probab=99.64  E-value=5.5e-17  Score=128.75  Aligned_cols=110  Identities=15%  Similarity=0.076  Sum_probs=79.9

Q ss_pred             CCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeee-------cCCCeEEeccc--c
Q psy7758          28 PPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLS-------LDNSRYIDAGK--K   98 (235)
Q Consensus        28 ~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~-------~~~~~~iDa~~--~   98 (235)
                      ..|+|..   .|+||||+++|++|+.+++|.|++++.+++..      ..-....|.-.       .+...+||+..  .
T Consensus        23 ~~L~i~~---~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~~------~~~~~~v~~~d~~~~~~~~~~~~~iD~~~~~~   93 (152)
T 3ihx_A           23 LVLYIDR---FLGGVFSKRRIPKRTQFGPVEGPLVRGSELKD------CYIHLKVSLDKGDRKERDLHEDLWFELSDETL   93 (152)
T ss_dssp             TTEEECT---TTCSEEESSCBCSSCEECCCCSCEECSTTCCS------SSCCCBC---------------CEECCCCTTT
T ss_pred             cceEEee---cCCeEEECceecCCCEEEeeccEEcCHHHhcc------CcceEEEEccccccccccCCccEEEEccCCCC
Confidence            4566643   58999999999999999999999998865311      00000111000       01357899986  5


Q ss_pred             CCccccccCCCC---CCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccC
Q psy7758          99 GNLARFMNHSCE---PNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKAD  150 (235)
Q Consensus        99 gn~aRfiNHSC~---PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~  150 (235)
                      +|+.|||||+|.   +|+....    ...++++.|+|||.+||||+++|+.+|..
T Consensus        94 ~NWmr~vn~a~~~~eqNl~a~q----~~~~I~~~~~r~I~pGeELlv~Y~~~y~~  144 (152)
T 3ihx_A           94 CNWMMFVRPAQNHLEQNLVAYQ----YGHHVYYTTIKNVEPKQELKVWYAASYAE  144 (152)
T ss_dssp             SCGGGGCCBCCSTTTCCEEEEE----CSSSEEEEESSCBCTTCBCCEEECHHHHH
T ss_pred             CcceeeeeccCCccCCCcEEEE----eCCeEEEEEeeecCCCCEEEEechHHHHH
Confidence            999999999998   6776532    24789999999999999999999988754

>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}

Probab=99.54  E-value=1.6e-14  Score=134.33  Aligned_cols=61  Identities=31%  Similarity=0.521  Sum_probs=47.0

Q ss_pred             ccccccCCCCCCceeEEEEECCc-----------eEEEEEEccCCCCCCeEEEecCCCccCCC---------CCeEEecC
Q psy7758         101 LARFMNHSCEPNCTAEKWTVSGD-----------TRVGLFALRDVPAGTELVFNYELQKADND---------GMRRCMCG  160 (235)
Q Consensus       101 ~aRfiNHSC~PN~~~~~~~~~~~-----------~~~~i~A~rdI~~GEElt~~Y~~~~~~~~---------~~~~C~Cg  160 (235)
                      .+.++||||.||+.+..  .++.           ..+.|+|+|||++||||||+|....++..         .+|.|.| 
T Consensus       200 ~~s~~NHSC~PN~~~~~--~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C~C-  276 (490)
T 3n71_A          200 NLGLVNHDCWPNCTVIF--NNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSC-  276 (490)
T ss_dssp             TGGGCEECSSCSEEEEE--ECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCCCC-
T ss_pred             hhhhcccCCCCCeeEEe--cCCccccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEeeC-
Confidence            35688999999998743  3321           28999999999999999999998766422         3788887 


Q ss_pred             CCCCc
Q psy7758         161 AASCS  165 (235)
Q Consensus       161 ~~~C~  165 (235)
                       ..|.
T Consensus       277 -~~C~  280 (490)
T 3n71_A          277 -EHCQ  280 (490)
T ss_dssp             -HHHH
T ss_pred             -CCCC
Confidence             5665

>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*

Probab=99.46  E-value=1.5e-13  Score=125.83  Aligned_cols=60  Identities=30%  Similarity=0.522  Sum_probs=47.0

Q ss_pred             ccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCC---------CCeEEecCCCCCce
Q psy7758         101 LARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADND---------GMRRCMCGAASCSG  166 (235)
Q Consensus       101 ~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~---------~~~~C~Cg~~~C~g  166 (235)
                      .++|+||||.||+.+..  .  ...+.|+|+|||++||||||+|....++..         ..|.|.|  ..|..
T Consensus       201 ~~s~~NHsC~PN~~~~~--~--~~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L~~~~~F~C~C--~~C~~  269 (429)
T 3qwp_A          201 SISLLNHSCDPNCSIVF--N--GPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDC--FRCQT  269 (429)
T ss_dssp             TGGGCEECSSCSEEEEE--E--TTEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHHHHHHCCCCCS--HHHHH
T ss_pred             hhHhhCcCCCCCeEEEE--e--CCEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHHhccCCeEeeC--CCCCC
Confidence            46789999999998742  2  357899999999999999999998766531         3777777  56653

>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*

Probab=99.41  E-value=3.6e-13  Score=123.51  Aligned_cols=59  Identities=25%  Similarity=0.424  Sum_probs=45.9

Q ss_pred             ccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCC---------CCeEEecCCCCCc
Q psy7758         101 LARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADND---------GMRRCMCGAASCS  165 (235)
Q Consensus       101 ~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~---------~~~~C~Cg~~~C~  165 (235)
                      .+.++||||.||+.+.  +.  ...+.|+|+|||++||||||+|....++..         .+|.|.|  ..|.
T Consensus       201 ~~s~~NHsC~PN~~~~--~~--~~~~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C~C--~~C~  268 (433)
T 3qww_A          201 DVALMNHSCCPNVIVT--YK--GTLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCEC--RECT  268 (433)
T ss_dssp             TGGGSEECSSCSEEEE--EE--TTEEEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHHSCCCCS--HHHH
T ss_pred             cccccCCCCCCCceEE--Ec--CCEEEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcCCEEeEC--CCCC
Confidence            4568899999999763  23  357889999999999999999998765422         3788988  3453

>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*

Probab=97.73  E-value=2.9e-05  Score=71.25  Aligned_cols=43  Identities=26%  Similarity=0.378  Sum_probs=35.9

Q ss_pred             CccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCC
Q psy7758         100 NLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYEL  146 (235)
Q Consensus       100 n~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~  146 (235)
                      .++.++||+|.||+.+..   + ...+.++|.++|++||||+++||.
T Consensus       221 P~~D~~NH~~~~~~~~~~---~-~~~~~~~a~~~i~~Geei~~~YG~  263 (449)
T 3qxy_A          221 PAADILNHLANHNANLEY---S-ANCLRMVATQPIPKGHEIFNTYGQ  263 (449)
T ss_dssp             TTGGGCEECSSCSEEEEE---C-SSEEEEEESSCBCTTCEEEECCSS
T ss_pred             ecHHHhcCCCCCCeEEEE---e-CCeEEEEECCCcCCCchhhccCCC
Confidence            346789999999987632   2 357889999999999999999987

>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*

Probab=97.56  E-value=4.5e-05  Score=69.54  Aligned_cols=47  Identities=26%  Similarity=0.372  Sum_probs=34.9

Q ss_pred             ccccccCCCCCCceeEEEEEC-------CceEEEEEEccCCCCCCeEEEecCCC
Q psy7758         101 LARFMNHSCEPNCTAEKWTVS-------GDTRVGLFALRDVPAGTELVFNYELQ  147 (235)
Q Consensus       101 ~aRfiNHSC~PN~~~~~~~~~-------~~~~~~i~A~rdI~~GEElt~~Y~~~  147 (235)
                      ++-++||++.||.....+.+.       ....+.++|.++|++||||+++||..
T Consensus       189 ~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~  242 (440)
T 2h21_A          189 MADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLN  242 (440)
T ss_dssp             STTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTT
T ss_pred             chHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCC
Confidence            456789999997532223332       24678999999999999999999975

>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}

Probab=97.38  E-value=0.00013  Score=67.79  Aligned_cols=44  Identities=27%  Similarity=0.322  Sum_probs=34.2

Q ss_pred             ccccccCCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCC
Q psy7758         101 LARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQ  147 (235)
Q Consensus       101 ~aRfiNHSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~  147 (235)
                      ++.++||+|.||...  + ......+.++|.++|++||||+++||..
T Consensus       272 ~~Dm~NH~~~~~~~~--~-~~~~~~~~~~a~~~i~~Geei~isYG~~  315 (497)
T 3smt_A          272 LWDMCNHTNGLITTG--Y-NLEDDRCECVALQDFRAGEQIYIFYGTR  315 (497)
T ss_dssp             TGGGCEECSCSEEEE--E-ETTTTEEEEEESSCBCTTCEEEECCCSC
T ss_pred             hHHhhcCCCccccee--e-eccCCeEEEEeCCccCCCCEEEEeCCCC
Confidence            456799999996321  2 2234578899999999999999999864

>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}

Probab=94.47  E-value=0.017  Score=40.83  Aligned_cols=21  Identities=29%  Similarity=0.586  Sum_probs=18.2

Q ss_pred             ccccccccccCCCCC-----eEEEeec
Q psy7758         213 PAVVEVCERCGAEGG-----EMLRCAL  234 (235)
Q Consensus       213 ~~~~d~~~~c~~~~~-----~~~~~~~  234 (235)
                      .+.++.|..|+ ++|     +||.||.
T Consensus        22 ~~~~~~C~vC~-~~~s~~~~~ll~CD~   47 (88)
T 2l43_A           22 IDEDAVCSICM-DGESQNSNVILFCDM   47 (88)
T ss_dssp             CCCCCCCSSCC-SSSSCSEEEEEECSS
T ss_pred             CCCCCcCCcCC-CCCCCCCCCEEECCC
Confidence            45679999999 988     9999984

>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A

Probab=93.98  E-value=0.019  Score=38.23  Aligned_cols=21  Identities=29%  Similarity=0.727  Sum_probs=18.5

Q ss_pred             ccccccccccCCCCCeEEEeec
Q psy7758         213 PAVVEVCERCGAEGGEMLRCAL  234 (235)
Q Consensus       213 ~~~~d~~~~c~~~~~~~~~~~~  234 (235)
                      ...++.|+.|+ ++|+||.||.
T Consensus         5 ~~~~~~C~vC~-~~g~ll~CD~   25 (66)
T 1xwh_A            5 QKNEDECAVCR-DGGELICCDG   25 (66)
T ss_dssp             CSCCCSBSSSS-CCSSCEECSS
T ss_pred             CCCCCCCccCC-CCCCEEEcCC
Confidence            45689999999 9999999984

>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}

Probab=93.32  E-value=0.035  Score=37.11  Aligned_cols=21  Identities=38%  Similarity=0.813  Sum_probs=18.0

Q ss_pred             ccccccccccCCCCCeEEEeec
Q psy7758         213 PAVVEVCERCGAEGGEMLRCAL  234 (235)
Q Consensus       213 ~~~~d~~~~c~~~~~~~~~~~~  234 (235)
                      ....+.|..|+ ++|+||.||.
T Consensus         9 ~~~~~~C~vC~-~~~~ll~Cd~   29 (66)
T 2lri_C            9 LAPGARCGVCG-DGTDVLRCTH   29 (66)
T ss_dssp             CCTTCCCTTTS-CCTTCEECSS
T ss_pred             CCCCCCcCCCC-CCCeEEECCC
Confidence            44567899999 9999999984

>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2

Probab=92.74  E-value=0.05  Score=38.50  Aligned_cols=21  Identities=19%  Similarity=0.681  Sum_probs=19.0

Q ss_pred             ccccccccccCCCCCeEEEeec
Q psy7758         213 PAVVEVCERCGAEGGEMLRCAL  234 (235)
Q Consensus       213 ~~~~d~~~~c~~~~~~~~~~~~  234 (235)
                      .+.++.|+.|+ ++|+||.||.
T Consensus        22 d~n~~~C~vC~-~~g~LL~CD~   42 (88)
T 1fp0_A           22 DDSATICRVCQ-KPGDLVMCNQ   42 (88)
T ss_dssp             SSSSSCCSSSC-SSSCCEECTT
T ss_pred             CCCCCcCcCcC-CCCCEEECCC
Confidence            66789999999 9999999984

>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}

Probab=92.41  E-value=0.04  Score=35.88  Aligned_cols=20  Identities=25%  Similarity=0.720  Sum_probs=17.7

Q ss_pred             cccccccccCCCCCeEEEeec
Q psy7758         214 AVVEVCERCGAEGGEMLRCAL  234 (235)
Q Consensus       214 ~~~d~~~~c~~~~~~~~~~~~  234 (235)
                      .+++.|..|+ ++|+||.||.
T Consensus         3 ~~~~~C~vC~-~~g~ll~Cd~   22 (60)
T 2puy_A            3 IHEDFCSVCR-KSGQLLMCDT   22 (60)
T ss_dssp             CCCSSCTTTC-CCSSCEECSS
T ss_pred             CCCCCCcCCC-CCCcEEEcCC
Confidence            3579999999 9999999984

>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}

Probab=91.53  E-value=0.1  Score=34.13  Aligned_cols=21  Identities=33%  Similarity=0.841  Sum_probs=18.5

Q ss_pred             ccccccccccCCCCCeEEEeec
Q psy7758         213 PAVVEVCERCGAEGGEMLRCAL  234 (235)
Q Consensus       213 ~~~~d~~~~c~~~~~~~~~~~~  234 (235)
                      .++++.|..|+ ++|+||.||.
T Consensus         8 ~~~~~~C~vC~-~~g~ll~CD~   28 (61)
T 2l5u_A            8 TDHQDYCEVCQ-QGGEIILCDT   28 (61)
T ss_dssp             SCCCSSCTTTS-CCSSEEECSS
T ss_pred             CCCCCCCccCC-CCCcEEECCC
Confidence            45679999999 9999999984

>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.31  E-value=0.067  Score=34.29  Aligned_cols=21  Identities=24%  Similarity=0.713  Sum_probs=18.2

Q ss_pred             ccccccccccCCCCCeEEEeec
Q psy7758         213 PAVVEVCERCGAEGGEMLRCAL  234 (235)
Q Consensus       213 ~~~~d~~~~c~~~~~~~~~~~~  234 (235)
                      ..+++.|+.|+ ++|+||.||.
T Consensus         6 ~~~~~~C~vC~-~~g~ll~Cd~   26 (56)
T 2yql_A            6 SGHEDFCSVCR-KSGQLLMCDT   26 (56)
T ss_dssp             CSSCCSCSSSC-CSSCCEECSS
T ss_pred             CCCCCCCccCC-CCCeEEEcCC
Confidence            44578999999 9999999984

>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A

Probab=91.22  E-value=0.05  Score=35.63  Aligned_cols=21  Identities=38%  Similarity=0.890  Sum_probs=18.3

Q ss_pred             ccccccccccCCCCCeEEEeec
Q psy7758         213 PAVVEVCERCGAEGGEMLRCAL  234 (235)
Q Consensus       213 ~~~~d~~~~c~~~~~~~~~~~~  234 (235)
                      ..+++.|+.|+ ++|+||.||.
T Consensus         6 d~~~~~C~vC~-~~g~ll~Cd~   26 (61)
T 1mm2_A            6 DHHMEFCRVCK-DGGELLCCDT   26 (61)
T ss_dssp             CSSCSSCTTTC-CCSSCBCCSS
T ss_pred             cCCCCcCCCCC-CCCCEEEcCC
Confidence            45578999999 9999999984

>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}

Probab=90.96  E-value=0.2  Score=46.20  Aligned_cols=31  Identities=26%  Similarity=0.414  Sum_probs=28.0

Q ss_pred             CCEEEEEcCCCceEEEEceeCCCCCEEEEec
Q psy7758          28 PPLEVFNTGSRGWGLKALTDLKRGQFVVEYV   58 (235)
Q Consensus        28 ~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~   58 (235)
                      ..++|...++.|+||+|+++|++|++|+...
T Consensus        93 ~~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP  123 (497)
T 3smt_A           93 EGFEMVNFKEEGFGLRATRDIKAEELFLWVP  123 (497)
T ss_dssp             TTEEEEEETTTEEEEEESSCBCTTCEEEEEE
T ss_pred             cceEEEEcCCCccEEEEcccCCCCCEEEEcC
Confidence            4699999999999999999999999998753

>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A

Probab=90.30  E-value=0.1  Score=40.19  Aligned_cols=21  Identities=33%  Similarity=0.907  Sum_probs=18.5

Q ss_pred             ccccccccccCCCCCeEEEeec
Q psy7758         213 PAVVEVCERCGAEGGEMLRCAL  234 (235)
Q Consensus       213 ~~~~d~~~~c~~~~~~~~~~~~  234 (235)
                      ..++|+|..|+ +||+|+.||.
T Consensus        60 Dg~~d~C~vC~-~GG~LlcCD~   80 (142)
T 2lbm_A           60 DGMDEQCRWCA-EGGNLICCDF   80 (142)
T ss_dssp             TSCBCSCSSSC-CCSSEEECSS
T ss_pred             CCCCCeecccC-CCCcEEeCCC
Confidence            44689999999 9999999984

>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A

Probab=88.79  E-value=0.2  Score=37.89  Aligned_cols=21  Identities=33%  Similarity=0.907  Sum_probs=18.3

Q ss_pred             ccccccccccCCCCCeEEEeec
Q psy7758         213 PAVVEVCERCGAEGGEMLRCAL  234 (235)
Q Consensus       213 ~~~~d~~~~c~~~~~~~~~~~~  234 (235)
                      ...+|+|..|+ +||||+.||.
T Consensus        54 Dg~~~~C~vC~-dGG~LlcCd~   74 (129)
T 3ql9_A           54 DGMDEQCRWCA-EGGNLICCDF   74 (129)
T ss_dssp             TSCBSSCTTTC-CCSEEEECSS
T ss_pred             CCCCCcCeecC-CCCeeEecCC
Confidence            44578999999 9999999984

>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*

Probab=87.19  E-value=0.43  Score=43.30  Aligned_cols=31  Identities=19%  Similarity=0.389  Sum_probs=26.1

Q ss_pred             CCEEEEEc-CCCceEEEEceeCCCCCEEEEec
Q psy7758          28 PPLEVFNT-GSRGWGLKALTDLKRGQFVVEYV   58 (235)
Q Consensus        28 ~~lev~~s-~~~G~GlfA~~~I~~Ge~I~ey~   58 (235)
                      +.++|... +..|+||+|+++|++|++|+...
T Consensus        38 ~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP   69 (449)
T 3qxy_A           38 PKVAVSRQGTVAGYGMVARESVQAGELLFVVP   69 (449)
T ss_dssp             TTEEEESSSCSSSSEEEESSCBCTTCEEEEEE
T ss_pred             CceEEEecCCCceEEEEECCCCCCCCEEEEeC
Confidence            56888765 47899999999999999998753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	235
d1mvha_	269	b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (S	1e-34
d1ml9a_	284	b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [T	5e-34
d2f69a2	171	b.85.7.1 (A:194-364) Histone H3 K4-specific methyl	1e-29
d2g46a1	119	b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth	9e-20
d2h2ja2	261	b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain	1e-04

>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 269

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: SET domain of Clr4
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  122 bits (308), Expect = 1e-34
 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)

Query: 2   LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEM 61
           +  ECN   C    +C NR  +     PLE+F T  +GWG+++L     G F+  Y+GE+
Sbjct: 111 VIYECNSF-CSCSMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEV 169

Query: 62  IDQKELNRRRRDMDRNNDHNYYFLSL---DNSRYIDAGKKGNLARFMNHSCEPNCTAEKW 118
           I   E  +R ++ D +     + L +    +   +DA   G+++RF NHSC PN      
Sbjct: 170 ITSAEAAKRDKNYDDDGITYLFDLDMFDDASEYTVDAQNYGDVSRFFNHSCSPNIAIYSA 229

Query: 119 TVSGDT----RVGLFALRDVPAGTELVFNY 144
             +        +  FA++D+    EL F+Y
Sbjct: 230 VRNHGFRTIYDLAFFAIKDIQPLEELTFDY 259

>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Length = 284

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Dim-5
species: Fungus (Neurospora crassa) [TaxId: 5141]

 Score =  121 bits (304), Expect = 5e-34
 Identities = 56/183 (30%), Positives = 80/183 (43%), Gaps = 29/183 (15%)

Query: 5   ECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQ 64
           EC+   C     C NR  E     PL++F T  RGWG+K   ++KRGQFV  Y+GE+I  
Sbjct: 103 ECHQ-GCACSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITS 161

Query: 65  KELNRRRRDMDRNNDHNYYFLSLDN--------------SRYIDAGKKGNLARFMNHSCE 110
           +E +RRR +       + Y  +LD                  +D        RF+NHSC+
Sbjct: 162 EEADRRRAESTIARRKDVYLFALDKFSDPDSLDPLLAGQPLEVDGEYMSGPTRFINHSCD 221

Query: 111 PNCTAEKWTVSGDT----RVGLFALRDVPAGTELVFNY----------ELQKADNDGMRR 156
           PN                 + LFA++D+P GTEL F+Y              +    M +
Sbjct: 222 PNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTK 281

Query: 157 CMC 159
           C+C
Sbjct: 282 CLC 284

>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Histone H3 K4-specific methyltransferase SET7/9 catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 1e-29
 Identities = 27/173 (15%), Positives = 51/173 (29%), Gaps = 10/173 (5%)

Query: 10  SCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNR 69
           SC +        +E+     +      S G GL +   +     +  Y G  I  +E++ 
Sbjct: 6   SCISTNALLPDPYESERVY-VAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDS 64

Query: 70  RRRDMDRN--NDHNYYFLSLDNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDT-RV 126
           R   ++ N  +      + +       +    +L    NHS  PNC  + +         
Sbjct: 65  RDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIK 124

Query: 127 GLFALRDVPAGTELVFNYELQKADNDGMRRCMCGAASCSGFIGAKKAVPPTSE 179
            +  LR V A  EL   Y                      +   +      ++
Sbjct: 125 CIRTLRAVEADEELTVAY------GYDHSPPGKSGPEAPEWYQVELKAFQATQ 171

>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Viral histone H3 Lysine 27 Methyltransferase
domain: Viral histone H3 Lysine 27 Methyltransferase
species: Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]

 Score = 79.5 bits (195), Expect = 9e-20
 Identities = 19/115 (16%), Positives = 40/115 (34%), Gaps = 15/115 (13%)

Query: 30  LEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDN 89
           + V  +   G+G+ A    ++G+ V E +  +    +      D   +  +         
Sbjct: 6   VIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTALEDYLFSRKNMSAMA---- 61

Query: 90  SRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNY 144
                           NHS +PN        +G  R+ +F ++ +  G E+  +Y
Sbjct: 62  ---------LGFGAIFNHSKDPNARH--ELTAGLKRMRIFTIKPIAIGEEITISY 105

>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Length = 261

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: RuBisCo LSMT catalytic domain
domain: RuBisCo LSMT catalytic domain
species: Garden pea (Pisum sativum) [TaxId: 3888]

 Score = 39.6 bits (91), Expect = 1e-04
 Identities = 22/131 (16%), Positives = 42/131 (32%), Gaps = 12/131 (9%)

Query: 38  RGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGK 97
           +G  L   T   +     E +    +    N+R        D  ++   +  SR     +
Sbjct: 120 QGSQLLKTTVSVKEYVKNECLKLEQEIILPNKRLFPDPVTLDDFFWAFGILRSRAFSRLR 179

Query: 98  K-----GNLARFMNHSCEPNCTAEKWTVSGDTRVG-------LFALRDVPAGTELVFNYE 145
                   +A  +NHS         + V G   +        L +   V AG ++   Y+
Sbjct: 180 NENLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYD 239

Query: 146 LQKADNDGMRR 156
           L K++ +    
Sbjct: 240 LNKSNAELALD 250

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	235
d1mvha_	269	SET domain of Clr4 {Fission yeast (Schizosaccharom	100.0
d1ml9a_	284	Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}	100.0
d2f69a2	171	Histone H3 K4-specific methyltransferase SET7/9 ca	99.94
d2g46a1	119	Viral histone H3 Lysine 27 Methyltransferase {Para	99.94
d2h2ja2	261	RuBisCo LSMT catalytic domain {Garden pea (Pisum s	99.27
d1mm2a_	61	Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606	92.7
d1fp0a1	70	Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo	87.37

>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: SET domain of Clr4
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=3.5e-40  Score=283.67  Aligned_cols=147  Identities=31%  Similarity=0.599  Sum_probs=131.2

Q ss_pred             ceEEcCCCCCCCCCCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCc
Q psy7758           2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHN   81 (235)
Q Consensus         2 ~~~eC~~~~C~~~~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~   81 (235)
                      ++|||++ .|+|+.+|.||++|++.+.+|+|++++.+||||||+++|++|++|++|.|++++..++..+...+.......
T Consensus       111 ~i~EC~~-~C~C~~~C~Nr~~q~g~~~~leV~~t~~~G~GvfA~~~I~kGt~I~eY~Gevi~~~e~~~R~~~y~~~~~~~  189 (269)
T d1mvha_         111 VIYECNS-FCSCSMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITY  189 (269)
T ss_dssp             EEECCCT-TSCSCTTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCC
T ss_pred             eEEECCC-CCCCCCCCCCeecCCCCccCEEEEEcCCCCeEEEeCcccCCCceEEEecceEEcHHHHHHHHHhHhhcCCcc
Confidence            6899998 799999999999999999999999999999999999999999999999999999999999988777665544


Q ss_pred             eeeeec---CCCeEEeccccCCccccccCCCCCCceeEEEEECCc----eEEEEEEccCCCCCCeEEEecCCCcc
Q psy7758          82 YYFLSL---DNSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGD----TRVGLFALRDVPAGTELVFNYELQKA  149 (235)
Q Consensus        82 ~~~~~~---~~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~----~~~~i~A~rdI~~GEElt~~Y~~~~~  149 (235)
                      +|.+..   ...++|||..+||++|||||||.||+.++.+++++.    ++|+|+|+|||++|||||+||+....
T Consensus       190 ~~~l~~~~~~~~~~iDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GEELt~DYG~~~d  264 (269)
T d1mvha_         190 LFDLDMFDDASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKD  264 (269)
T ss_dssp             EEEECSSCSSSCEEEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred             hhheecccccccceeeeeecCcceEEeecCCCCCcEEEEEEecCCcCccceEEEEECCccCCCCEEEEecCCCcC
Confidence            444433   356889999999999999999999999998887653    68999999999999999999997543

>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Dim-5
species: Fungus (Neurospora crassa) [TaxId: 5141]

Probab=100.00  E-value=1.5e-40  Score=288.33  Aligned_cols=149  Identities=36%  Similarity=0.668  Sum_probs=128.4

Q ss_pred             ceEEcCCCCCCCCCCCCCccCCCCCCCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCc
Q psy7758           2 LYVECNPDSCPARTKCQNRDFETRNYPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHN   81 (235)
Q Consensus         2 ~~~eC~~~~C~~~~~C~N~~~~~~~~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~   81 (235)
                      +||||++ .|+|+..|.||++|++.+.+|+|++++.+||||||+++|++|++|++|.|++++.+++..+...........
T Consensus       100 ~i~EC~~-~C~C~~~C~Nr~~q~g~~~~lev~kt~~kG~Gv~a~~~I~kGt~I~eY~Gevi~~~ea~~~~~~~~~~~~~~  178 (284)
T d1ml9a_         100 PIYECHQ-GCACSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKD  178 (284)
T ss_dssp             CEECCCT-TCSSCTTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHH
T ss_pred             ceeCCCC-CCCcCCCCCCeeccCCCccCEEEEEcCCCceEEeeCCCcCCCCEEEEecCcccCHHHHHHHHHHHHhhccCC
Confidence            5899998 899999999999999999999999999999999999999999999999999999999988877666555455


Q ss_pred             eeeeecC--------------CCeEEeccccCCccccccCCCCCCceeEEEEECCc----eEEEEEEccCCCCCCeEEEe
Q psy7758          82 YYFLSLD--------------NSRYIDAGKKGNLARFMNHSCEPNCTAEKWTVSGD----TRVGLFALRDVPAGTELVFN  143 (235)
Q Consensus        82 ~~~~~~~--------------~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~----~~~~i~A~rdI~~GEElt~~  143 (235)
                      .|++.++              ..++||+...||++|||||||.||+.++.+++++.    .+|+|+|+|||++|||||||
T Consensus       179 ~y~~~l~~~~~~~~~~~~~~~~~~~iDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~d  258 (284)
T d1ml9a_         179 VYLFALDKFSDPDSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFD  258 (284)
T ss_dssp             HHEEECCSSCCSSSSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEEC
T ss_pred             ccceecccccccccccccccCCceeEeeeeccchhheeeccccCCcceEEEEeccCCCCceEEEEEECCccCCCCEEEEe
Confidence            5555554              34589999999999999999999999987766533    78999999999999999999


Q ss_pred             cCCCccCC
Q psy7758         144 YELQKADN  151 (235)
Q Consensus       144 Y~~~~~~~  151 (235)
                      |+..+++.
T Consensus       259 Yg~~~~~~  266 (284)
T d1ml9a_         259 YVNGLTGL  266 (284)
T ss_dssp             TTC-----
T ss_pred             cCCCCCCc
Confidence            99887753

>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Histone H3 K4-specific methyltransferase SET7/9 catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.7e-27  Score=190.13  Aligned_cols=117  Identities=26%  Similarity=0.319  Sum_probs=95.0

Q ss_pred             CCEEEEEc--CCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEEe--------ccc
Q psy7758          28 PPLEVFNT--GSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYID--------AGK   97 (235)
Q Consensus        28 ~~lev~~s--~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~iD--------a~~   97 (235)
                      ..|.|..|  |++|+||||+++|++|++|++|.|++++..++..+....      ..|++.+.....+|        +..
T Consensus        21 ~~v~v~~S~Ip~~G~GlFA~~~I~kG~~I~~Y~G~~i~~~e~~~~~~~~------~~y~~~l~~~~~~d~~~~~~~~~~~   94 (171)
T d2f69a2          21 ERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWAL------NGNTLSLDEETVIDVPEPYNHVSKY   94 (171)
T ss_dssp             TTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGG------CSSCEECSSSCEEECCTTTTSTTTC
T ss_pred             ceEEEEeeccCCCceehccCcccCCCCEEEEeeeEEECHHHHhhhhhhc------cccEEEeccceeecCCccccccccc
Confidence            45889988  578999999999999999999999999998876654332      23555565555555        445


Q ss_pred             cCCccccccCCCCCCceeEEEEECC-ceEEEEEEccCCCCCCeEEEecCCCccC
Q psy7758          98 KGNLARFMNHSCEPNCTAEKWTVSG-DTRVGLFALRDVPAGTELVFNYELQKAD  150 (235)
Q Consensus        98 ~gn~aRfiNHSC~PN~~~~~~~~~~-~~~~~i~A~rdI~~GEElt~~Y~~~~~~  150 (235)
                      .||++|||||||.|||.+..+.... ..++.++|+|||++|||||+||+.++.+
T Consensus        95 ~g~~~rfiNHsc~pN~~~~~~~~~~~~~~i~~~A~RdI~~GEEL~~dYG~~~~~  148 (171)
T d2f69a2          95 CASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSP  148 (171)
T ss_dssp             CSCCGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSCC
T ss_pred             ccCcceeeEccCCCCceEEEEEecCCCeEEEEEEccCcCCCCEEEEEeCCCCCC
Confidence            6899999999999999987766544 4788899999999999999999987765

>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Viral histone H3 Lysine 27 Methyltransferase
domain: Viral histone H3 Lysine 27 Methyltransferase
species: Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]

Probab=99.94  E-value=1.5e-27  Score=180.59  Aligned_cols=111  Identities=20%  Similarity=0.311  Sum_probs=92.2

Q ss_pred             CCCEEEEEcCCCceEEEEceeCCCCCEEEEeccEEeCHHHHHHHHHhhccCCCCceeeeecCCCeEEeccccCCcccccc
Q psy7758          27 YPPLEVFNTGSRGWGLKALTDLKRGQFVVEYVGEMIDQKELNRRRRDMDRNNDHNYYFLSLDNSRYIDAGKKGNLARFMN  106 (235)
Q Consensus        27 ~~~lev~~s~~~G~GlfA~~~I~~Ge~I~ey~G~ii~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~iDa~~~gn~aRfiN  106 (235)
                      ...++|.+|+.+|+||||+++|++||+|.+|.|++++..+.....         .-|.+..+....+    ..+.+||+|
T Consensus         3 ~~~v~v~~s~~~G~GvfA~~~i~~g~~i~~~~g~~~~~~~~~~~~---------~~y~~~~~~~~~~----~~~~~~~~N   69 (119)
T d2g46a1           3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTAL---------EDYLFSRKNMSAM----ALGFGAIFN   69 (119)
T ss_dssp             CSSCEECCCSSCSSCEEECSCBCTTCCCEEEECEEECSTHHHHHT---------CSSEEEETTEEEE----CCSTTSSCC
T ss_pred             cCcEEEEEcCCCceEEEECchhhCCCEEecccEEEecHHHHhhhh---------hceeeecccccce----ecCCeEEEE
Confidence            356999999999999999999999999999999999887765442         1255566555444    346789999


Q ss_pred             CCCCCCceeEEEEECCceEEEEEEccCCCCCCeEEEecCCCccCCC
Q psy7758         107 HSCEPNCTAEKWTVSGDTRVGLFALRDVPAGTELVFNYELQKADND  152 (235)
Q Consensus       107 HSC~PN~~~~~~~~~~~~~~~i~A~rdI~~GEElt~~Y~~~~~~~~  152 (235)
                      |||.|||.+.  ...+..++.++|+|||++|||||++|+.+||...
T Consensus        70 Hsc~pN~~~~--~~~~~~~~~~~A~rdI~~GEEL~~dYg~~yw~~r  113 (119)
T d2g46a1          70 HSKDPNARHE--LTAGLKRMRIFTIKPIAIGEEITISYGDDYWLSR  113 (119)
T ss_dssp             CCSSCCCEEE--ECSSSSEEEEECSSCBCTTEEECCCCCSSSCCSS
T ss_pred             ecCCcCceEE--EECCCCEEEEEECcccCCCCEEEEecChhHhccC
Confidence            9999999874  3566788999999999999999999999999754

>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: RuBisCo LSMT catalytic domain
domain: RuBisCo LSMT catalytic domain
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=99.27  E-value=1.7e-12  Score=107.89  Aligned_cols=48  Identities=25%  Similarity=0.350  Sum_probs=36.0

Q ss_pred             CccccccCCCCCCceeEEEE-------ECCceEEEEEEccCCCCCCeEEEecCCC
Q psy7758         100 NLARFMNHSCEPNCTAEKWT-------VSGDTRVGLFALRDVPAGTELVFNYELQ  147 (235)
Q Consensus       100 n~aRfiNHSC~PN~~~~~~~-------~~~~~~~~i~A~rdI~~GEElt~~Y~~~  147 (235)
                      ..+.++||||.||+......       ..++..+.++|+|||++|||||++||..
T Consensus       187 P~~d~~NHsc~pn~~~~~~~~~~~~~~~~~~~~~~l~A~r~I~~GEEI~isYG~~  241 (261)
T d2h2ja2         187 PMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLN  241 (261)
T ss_dssp             TTGGGCEECSSCCSCCCCCC-----------CEEEEECSSCCCTTSBCEECSCSS
T ss_pred             hhhHHhhcCCCCCcccccccccCcccccCCCcEEEEEECCCCCCCCEEEEecCCC
Confidence            34668999999999753211       1223578999999999999999999854

>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Mi2-beta (CHD4)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.70  E-value=0.012  Score=37.00  Aligned_cols=21  Identities=38%  Similarity=0.890  Sum_probs=18.5

Q ss_pred             ccccccccccCCCCCeEEEeec
Q psy7758         213 PAVVEVCERCGAEGGEMLRCAL  234 (235)
Q Consensus       213 ~~~~d~~~~c~~~~~~~~~~~~  234 (235)
                      ..++|.|+.|+ ++|+||.||.
T Consensus         6 d~~~~~C~~C~-~~g~lv~Cd~   26 (61)
T d1mm2a_           6 DHHMEFCRVCK-DGGELLCCDT   26 (61)
T ss_dssp             CSSCSSCTTTC-CCSSCBCCSS
T ss_pred             cCCcCCCcCCC-CCCeEEEeCC
Confidence            45678999999 9999999984

>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Nuclear corepressor KAP-1 (TIF-1beta)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.37  E-value=0.11  Score=33.26  Aligned_cols=21  Identities=19%  Similarity=0.681  Sum_probs=18.2

Q ss_pred             ccccccccccCCCCCeEEEeec
Q psy7758         213 PAVVEVCERCGAEGGEMLRCAL  234 (235)
Q Consensus       213 ~~~~d~~~~c~~~~~~~~~~~~  234 (235)
                      .+....|..|+ ++|+||+||.
T Consensus         4 Dd~c~~C~~C~-~~~~ll~Cd~   24 (70)
T d1fp0a1           4 DDSATICRVCQ-KPGDLVMCNQ   24 (70)
T ss_dssp             SSSSSCCSSSC-SSSCCEECTT
T ss_pred             CCCCCCCCCCC-CcCEEEECCC
Confidence            45678999999 9999999985