Psyllid ID: psy7933

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
Protein Sequence
NLSPDKTARSLFEDSRGRPDSNEATQDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPASPALGPSSTQCLPQ
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccEEEEccccEEEEEEEEEEcccccccEEEEEEEEccEEEEEcccccccEEEEEEccccEEEEccHHHHHcccccEEEEEEcccEEEEEcccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHcccccccccccccccccccccEEcccEEEEEcccEEEEccEEEcccccccccEEEEEEEEccEEEEEEccccccEEEEEEccccEEEccHHHHHHHccccEEEEEEcccEEEEEcccHHHHHHHHHHHcHHHHHHHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
nlspdktarslfedsrgrpdsneatqdtsvilyvpeieeirispvvsrkgyLNILEQKTNGWKKRWVAVRrpyvfifrdekdPVERALVNLATAqveysedqqamvrvPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPllagqirsktsrrqppaspalgpsstqclpq
Flexible Loop (DISEMBL)
nlspdktarslfedsrgrpdsneatqdtsvilyvpeieeirispvvsrkgylnileqktngwkkrwvAVRRPYVfifrdekdpvERALVNLATAQveysedqqamVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPpaspalgpsstqclpq
Low Complexity Region (SEG)
NLSPDKTARSLFEDSRGRPDSNEATQDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPASPALGPSSTQCLPQ
Disordered region (IsUnstruct)
****************************SVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQ**************************
Disordered Region (DISOPRED)
*********************************************VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSE****MVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINP*******************************
Disordered Region (DISEMBL)
*************************QDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIR************************
Disordered Region (DISPRO)
****************************SVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRS***********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
NLSPDKTARSLFEDSRGRPDSNEATQDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPASPALGPSSTQCLPQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	171	2.2.26 [Sep-21-2011]
Q7PHR1	1644	Kinesin-like protein unc-	yes	N/A	0.719	0.074	0.780	1e-53
Q17BU3	1644	Kinesin-like protein unc-	N/A	N/A	0.719	0.074	0.764	1e-52
Q28WQ1	1671	Kinesin-like protein unc-	yes	N/A	0.742	0.076	0.742	3e-52
A1ZAJ2	1670	Kinesin-like protein unc-	yes	N/A	0.742	0.076	0.734	1e-51
Q12756	1690	Kinesin-like protein KIF1	yes	N/A	0.719	0.072	0.609	3e-42
P33173	1695	Kinesin-like protein KIF1	yes	N/A	0.719	0.072	0.601	3e-41
O60333	1816	Kinesin-like protein KIF1	no	N/A	0.730	0.068	0.616	2e-40
Q60575	1816	Kinesin-like protein KIF1	no	N/A	0.713	0.067	0.606	3e-40
O88658	1816	Kinesin-like protein KIF1	no	N/A	0.713	0.067	0.598	8e-40
P23678	1584	Kinesin-like protein unc-	yes	N/A	0.777	0.083	0.514	4e-39

>sp|Q7PHR1|KIF1A_ANOGA Kinesin-like protein unc-104 OS=Anopheles gambiae GN=unc-104 PE=3 SV=3

 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 96/123 (78%), Positives = 110/123 (89%)

Query: 25   TQDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPV 84
            TQD S+ LYVPE+EEIR+SPVV+RKGYLN+LE   +GWKKRWV VRRPYVFIFR +KDPV
Sbjct: 1522 TQDLSLRLYVPELEEIRVSPVVARKGYLNVLEHGGSGWKKRWVTVRRPYVFIFRSDKDPV 1581

Query: 85   ERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAG 144
            ERA++NLATAQVE SEDQ AMV+VP +FSVVTKH GYL+QT G +EVH+WLYAINPLLAG
Sbjct: 1582 ERAVLNLATAQVECSEDQAAMVKVPNTFSVVTKHRGYLLQTLGDKEVHDWLYAINPLLAG 1641

Query: 145  QIR 147
            QIR
Sbjct: 1642 QIR 1644

Required for presynaptic maturation, has a role in axonal transport of dense-core vesicles carrying synaptic vesicle precursors, components required for the morphological transformation of axonal growth cones to mature boutons.
Anopheles gambiae (taxid: 7165)

>sp|Q17BU3|KIF1A_AEDAE Kinesin-like protein unc-104 OS=Aedes aegypti GN=unc-104 PE=3 SV=1

 Score =  205 bits (521), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/123 (76%), Positives = 110/123 (89%)

Query: 25   TQDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPV 84
            +Q+ S+ LYVPE+EEIR+SPVV+RKGYLN+LE   +GWKKRWV VRRPYVFIFR +KDPV
Sbjct: 1522 SQEVSLRLYVPELEEIRVSPVVARKGYLNVLEHGGSGWKKRWVTVRRPYVFIFRSDKDPV 1581

Query: 85   ERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAG 144
            ERA++NLATAQVE SEDQ AMV+VP +FSVVTKH GYL+QT G +EVH+WLYAINPLLAG
Sbjct: 1582 ERAVLNLATAQVECSEDQAAMVKVPNTFSVVTKHRGYLLQTLGDKEVHDWLYAINPLLAG 1641

Query: 145  QIR 147
            QIR
Sbjct: 1642 QIR 1644

Required for presynaptic maturation, has a role in axonal transport of dense-core vesicles carrying synaptic vesicle precursors, components required for the morphological transformation of axonal growth cones to mature boutons.

Aedes aegypti (taxid: 7159)

>sp|Q28WQ1|KIF1A_DROPS Kinesin-like protein unc-104 OS=Drosophila pseudoobscura pseudoobscura GN=unc-104 PE=3 SV=1

 Score =  204 bits (518), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 95/128 (74%), Positives = 112/128 (87%), Gaps = 1/128 (0%)

Query: 32   LYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNL 91
            LYVPE+EEIR+SPVV+RKG LN+LE   +GWKKRWV VRRPYVFI+R EKDPVERA++NL
Sbjct: 1525 LYVPELEEIRVSPVVARKGLLNVLEHGGSGWKKRWVTVRRPYVFIYRSEKDPVERAVLNL 1584

Query: 92   ATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTS 151
            ATAQVE SEDQ AMV++P +FSVVTKH GYL+QT G +EVH+WLYAINPLLAGQI+S+ +
Sbjct: 1585 ATAQVECSEDQAAMVKIPNTFSVVTKHRGYLLQTLGDKEVHDWLYAINPLLAGQIKSRLA 1644

Query: 152  RRQ-PPAS 158
            RR   PAS
Sbjct: 1645 RRTLEPAS 1652

Required for presynaptic maturation, has a role in axonal transport of dense-core vesicles carrying synaptic vesicle precursors, components required for the morphological transformation of axonal growth cones to mature boutons.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|A1ZAJ2|KIF1A_DROME Kinesin-like protein unc-104 OS=Drosophila melanogaster GN=unc-104 PE=1 SV=1

 Score =  202 bits (513), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 94/128 (73%), Positives = 111/128 (86%), Gaps = 1/128 (0%)

Query: 32   LYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNL 91
            LYVPE+EEIR+SPVV+RKG LN+LE   +GWKKRWV VRRPYVFI+R EKDPVERA++NL
Sbjct: 1524 LYVPELEEIRVSPVVARKGLLNVLEHGGSGWKKRWVIVRRPYVFIYRSEKDPVERAVLNL 1583

Query: 92   ATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTS 151
            ATA VE SEDQ AMV++P +FSVVTKH GYL+QT G +EVH+WLYAINPLLAGQI+S+ +
Sbjct: 1584 ATAHVECSEDQAAMVKIPNTFSVVTKHRGYLLQTLGDKEVHDWLYAINPLLAGQIKSRLA 1643

Query: 152  RRQ-PPAS 158
            RR   PAS
Sbjct: 1644 RRTLEPAS 1651

Required for presynaptic maturation, has a role in axonal transport of dense-core vesicles carrying synaptic vesicle precursors, components required for the morphological transformation of axonal growth cones to mature boutons.

Drosophila melanogaster (taxid: 7227)

>sp|Q12756|KIF1A_HUMAN Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=1 SV=2

 Score =  170 bits (431), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 75/123 (60%), Positives = 101/123 (82%)

Query: 32   LYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNL 91
            L VP+I+EIR+SP+VS+KGYL+ LE  T+GW +R+V VRRPY +++  +KD VER ++NL
Sbjct: 1562 LLVPDIQEIRVSPIVSKKGYLHFLEPHTSGWARRFVVVRRPYAYMYNSDKDTVERFVLNL 1621

Query: 92   ATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTS 151
            ATAQVEYSEDQQAM++ P +F+V T+H G L+Q A  +++H+WLYA NPLLAG IRSK S
Sbjct: 1622 ATAQVEYSEDQQAMLKTPNTFAVCTEHRGILLQAASDKDMHDWLYAFNPLLAGTIRSKLS 1681

Query: 152  RRQ 154
            RR+
Sbjct: 1682 RRR 1684

Motor for anterograde axonal transport of synaptic vesicle precursors.

Homo sapiens (taxid: 9606)

>sp|P33173|KIF1A_MOUSE Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1a PE=1 SV=2

 Score =  167 bits (424), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 74/123 (60%), Positives = 99/123 (80%)

Query: 32   LYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNL 91
            L VP+I+EIR+SP+VS+KGYL+ LE  T GW KR+V VRRPY +++  +KD VER ++NL
Sbjct: 1567 LLVPDIQEIRVSPIVSKKGYLHFLEPHTAGWAKRFVVVRRPYAYMYNSDKDTVERFVLNL 1626

Query: 92   ATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTS 151
            +TAQVEYSEDQQAM++ P +F+V T+H G L+Q    +++H+WLYA NPLLAG IRSK S
Sbjct: 1627 STAQVEYSEDQQAMLKTPNTFAVCTEHRGILLQANSDKDMHDWLYAFNPLLAGTIRSKLS 1686

Query: 152  RRQ 154
            RR+
Sbjct: 1687 RRR 1689

Motor for anterograde axonal transport of synaptic vesicle precursors.

Mus musculus (taxid: 10090)

>sp|O60333|KIF1B_HUMAN Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1B PE=1 SV=5

 Score =  164 bits (416), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 96/125 (76%)

Query: 34   VPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLAT 93
            VP+IEEIR S VVS+KGYL+  E   + W K +V VRRPYVFI+  +KDPVER ++NL+T
Sbjct: 1690 VPDIEEIRPSSVVSKKGYLHFKEPLYSNWAKHFVVVRRPYVFIYNSDKDPVERGIINLST 1749

Query: 94   AQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRR 153
            AQVEYSEDQQAMV+ P +F+V TKH G L+Q    +++++WLYA NPLLAG IRSK SRR
Sbjct: 1750 AQVEYSEDQQAMVKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTIRSKLSRR 1809

Query: 154  QPPAS 158
             P  S
Sbjct: 1810 CPSQS 1814

Motor for anterograde transport of mitochondria. Has a microtubule plus end-directed motility. Isoform 2 is required for induction of neuronal apoptosis.

Homo sapiens (taxid: 9606)

>sp|Q60575|KIF1B_MOUSE Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1b PE=1 SV=2

 Score =  164 bits (414), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 95/122 (77%)

Query: 34   VPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLAT 93
            VP+IEE+R   VVS+KGYL+  E  ++ W K +V VRRPYVFI+  +KDPVER ++NL+T
Sbjct: 1690 VPDIEEVRAGSVVSKKGYLHFKEPLSSNWAKHFVVVRRPYVFIYNSDKDPVERGIINLST 1749

Query: 94   AQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRR 153
            AQVEYSEDQQAMV+ P +F+V TKH G L+Q    +++++WLYA NPLLAG IRSK SRR
Sbjct: 1750 AQVEYSEDQQAMVKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTIRSKLSRR 1809

Query: 154  QP 155
             P
Sbjct: 1810 CP 1811

Motor for anterograde transport of mitochondria. Has a microtubule plus end-directed motility.

Mus musculus (taxid: 10090)

>sp|O88658|KIF1B_RAT Kinesin-like protein KIF1B OS=Rattus norvegicus GN=Kif1b PE=1 SV=2

 Score =  162 bits (411), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 95/122 (77%)

Query: 34   VPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLAT 93
            VP+IEE+R   VVS+KGYL+  E  ++ W K +V VRRPYVFI+  +KDPVER ++NL+T
Sbjct: 1690 VPDIEEVRAGSVVSKKGYLHFKEPLSSNWAKHFVVVRRPYVFIYNSDKDPVERGIINLST 1749

Query: 94   AQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRR 153
            AQVEYSEDQQAM++ P +F+V TKH G L+Q    +++++WLYA NPLLAG IRSK SRR
Sbjct: 1750 AQVEYSEDQQAMLKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTIRSKLSRR 1809

Query: 154  QP 155
             P
Sbjct: 1810 CP 1811

Isoform 1 mediates the transport of synaptic vesicles in neuronal cells.

Rattus norvegicus (taxid: 10116)

>sp|P23678|UN104_CAEEL Kinesin-like protein unc-104 OS=Caenorhabditis elegans GN=unc-104 PE=2 SV=3

 Score =  160 bits (405), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 71/138 (51%), Positives = 102/138 (73%), Gaps = 5/138 (3%)

Query: 32   LYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNL 91
            + VPE+ E R+  VVS+KGY+N LE+KT GW +RWV VRRPY+ +FRD++D V R ++NL
Sbjct: 1447 ILVPEVLEERVGVVVSKKGYMNFLEEKTQGWTRRWVIVRRPYILLFRDDRDLVIRGIINL 1506

Query: 92   ATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIR---- 147
            A A++E+SEDQQAMV+VP +FSV T   G+LMQ     E+++WLYAINPL+AGQ++    
Sbjct: 1507 ANARIEHSEDQQAMVKVPNTFSVCTNQRGFLMQMMPGDEMYDWLYAINPLMAGQMKLHGN 1566

Query: 148  -SKTSRRQPPASPALGPS 164
             + T+ + P +S ++  S
Sbjct: 1567 QNGTTLKSPTSSSSIAAS 1584

Involved in microtubule-associated transport.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
328715398	1716	PREDICTED: kinesin-like protein unc-104-	0.906	0.090	0.697	1e-58
345482168	1720	PREDICTED: kinesin-like protein unc-104	0.760	0.075	0.8	3e-58
189239964	1635	PREDICTED: similar to Kinesin-like prote	0.760	0.079	0.792	1e-57
270012147	1676	hypothetical protein TcasGA2_TC006253 [T	0.760	0.077	0.792	1e-57
383850880	1702	PREDICTED: kinesin-like protein unc-104-	0.830	0.083	0.732	2e-57
307189944	1743	Kinesin-like protein unc-104 [Camponotus	0.760	0.074	0.792	2e-57
328786858	1703	PREDICTED: kinesin 3B isoform 1 [Apis me	0.830	0.083	0.732	3e-57
380016605	1703	PREDICTED: LOW QUALITY PROTEIN: kinesin-	0.830	0.083	0.732	6e-57
350399498	1688	PREDICTED: kinesin-like protein unc-104-	0.742	0.075	0.795	2e-56
340721053	1688	PREDICTED: kinesin-like protein unc-104-	0.742	0.075	0.795	2e-56

>gi|328715398|ref|XP_003245618.1| PREDICTED: kinesin-like protein unc-104-like [Acyrthosiphon pisum]

 Score =  230 bits (587), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 113/162 (69%), Positives = 131/162 (80%), Gaps = 7/162 (4%)

Query: 2    LSPDKTAR-------SLFEDSRGRPDSNEATQDTSVILYVPEIEEIRISPVVSRKGYLNI 54
             SPD++ +       S++ +      S+ +T +  ++LYVPE+EEIRISPV+SRKGYLNI
Sbjct: 1537 FSPDRSIQRGSNISDSIYLNQDVMVSSHSSTSEPQLVLYVPEVEEIRISPVISRKGYLNI 1596

Query: 55   LEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSV 114
            LE KTNGWKKRWV VRRPYVFIFRDEKDPVERAL+NL TAQVEYSEDQ AMV+VP SFSV
Sbjct: 1597 LEHKTNGWKKRWVTVRRPYVFIFRDEKDPVERALINLTTAQVEYSEDQLAMVKVPNSFSV 1656

Query: 115  VTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPP 156
            VTKH GYLMQT   +EV+EWLYAINPLLAGQIRSKTSR+  P
Sbjct: 1657 VTKHRGYLMQTLLDKEVYEWLYAINPLLAGQIRSKTSRQIMP 1698

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345482168|ref|XP_001605334.2| PREDICTED: kinesin-like protein unc-104 [Nasonia vitripennis]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 104/130 (80%), Positives = 121/130 (93%)

Query: 29   SVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERAL 88
            S++LYVPE+EEIRISPV++RKGYLN+LE KTNGWKKRWV+VRRPYVFIFRDEKDPVERAL
Sbjct: 1565 SLVLYVPEVEEIRISPVIARKGYLNVLEHKTNGWKKRWVSVRRPYVFIFRDEKDPVERAL 1624

Query: 89   VNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRS 148
            +NLATAQVEYSEDQ AMV+VP +FSVVTKH GYL+QT G +EV++WLYAINPLLAGQIRS
Sbjct: 1625 INLATAQVEYSEDQLAMVKVPNTFSVVTKHRGYLLQTLGDKEVYDWLYAINPLLAGQIRS 1684

Query: 149  KTSRRQPPAS 158
            K +R+ P A+
Sbjct: 1685 KLARKGPGAN 1694

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239964|ref|XP_001813344.1| PREDICTED: similar to Kinesin-like protein unc-104 (Protein immaculate connections) (DUnc104) [Tribolium castaneum]

 Score =  227 bits (579), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/130 (79%), Positives = 120/130 (92%)

Query: 26   QDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVE 85
            +D  ++LYVP++EEIRISPVV+RKGYLN+LE KT+GWKKRWVAVRRPYVFIFRDEKDPVE
Sbjct: 1493 RDPELVLYVPDMEEIRISPVVARKGYLNVLEHKTHGWKKRWVAVRRPYVFIFRDEKDPVE 1552

Query: 86   RALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQ 145
            RAL+NLATAQVEYSEDQ AMVR+P +FSVV+KH GYL+QT   +EVH+WLYAINPLLAGQ
Sbjct: 1553 RALINLATAQVEYSEDQLAMVRLPNTFSVVSKHRGYLLQTLHEKEVHDWLYAINPLLAGQ 1612

Query: 146  IRSKTSRRQP 155
            IRSK++RR P
Sbjct: 1613 IRSKSARRNP 1622

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270012147|gb|EFA08595.1| hypothetical protein TcasGA2_TC006253 [Tribolium castaneum]

 Score =  227 bits (578), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/130 (79%), Positives = 120/130 (92%)

Query: 26   QDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVE 85
            +D  ++LYVP++EEIRISPVV+RKGYLN+LE KT+GWKKRWVAVRRPYVFIFRDEKDPVE
Sbjct: 1534 RDPELVLYVPDMEEIRISPVVARKGYLNVLEHKTHGWKKRWVAVRRPYVFIFRDEKDPVE 1593

Query: 86   RALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQ 145
            RAL+NLATAQVEYSEDQ AMVR+P +FSVV+KH GYL+QT   +EVH+WLYAINPLLAGQ
Sbjct: 1594 RALINLATAQVEYSEDQLAMVRLPNTFSVVSKHRGYLLQTLHEKEVHDWLYAINPLLAGQ 1653

Query: 146  IRSKTSRRQP 155
            IRSK++RR P
Sbjct: 1654 IRSKSARRNP 1663

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850880|ref|XP_003701002.1| PREDICTED: kinesin-like protein unc-104-like [Megachile rotundata]

 Score =  226 bits (576), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 104/142 (73%), Positives = 123/142 (86%)

Query: 29   SVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERAL 88
            +++LYVPE+EEIRISPV++RKGYLN+LE KTNGWKKRWVAVRRPYV IFR+EKDPVERAL
Sbjct: 1551 NLVLYVPEVEEIRISPVIARKGYLNVLEHKTNGWKKRWVAVRRPYVLIFREEKDPVERAL 1610

Query: 89   VNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRS 148
            +NLATAQVEYSEDQ AMV+VP +FSVVTKH GYL+QT G +EV++WLYAINPLLAGQIRS
Sbjct: 1611 INLATAQVEYSEDQLAMVKVPNTFSVVTKHRGYLLQTLGDKEVYDWLYAINPLLAGQIRS 1670

Query: 149  KTSRRQPPASPALGPSSTQCLP 170
            K +R+ P A+  +  S     P
Sbjct: 1671 KLARKGPTATNLINASPVGLAP 1692

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189944|gb|EFN74180.1| Kinesin-like protein unc-104 [Camponotus floridanus]

 Score =  226 bits (576), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 103/130 (79%), Positives = 120/130 (92%)

Query: 29   SVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERAL 88
            +++LYVPE+EEIRISPV++RKGYLN+LE KTNGWKKRWVAVRRPYV IFR+EKDPVERAL
Sbjct: 1592 NLVLYVPEVEEIRISPVIARKGYLNVLEHKTNGWKKRWVAVRRPYVLIFREEKDPVERAL 1651

Query: 89   VNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRS 148
            +NLATAQVEYSEDQ AMV+VP +FSVVTKH GYL+QT G +EV++WLYAINPLLAGQIRS
Sbjct: 1652 INLATAQVEYSEDQLAMVKVPNTFSVVTKHRGYLLQTLGDKEVYDWLYAINPLLAGQIRS 1711

Query: 149  KTSRRQPPAS 158
            K +R+ P AS
Sbjct: 1712 KLARKGPAAS 1721

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786858|ref|XP_397276.3| PREDICTED: kinesin 3B isoform 1 [Apis mellifera]

 Score =  226 bits (575), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 104/142 (73%), Positives = 123/142 (86%)

Query: 29   SVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERAL 88
            +++LYVPE+EEIRISPV++RKGYLN+LE KTNGWKKRWVAVRRPYV IFR+EKDPVERAL
Sbjct: 1552 NLVLYVPEVEEIRISPVIARKGYLNVLEHKTNGWKKRWVAVRRPYVLIFREEKDPVERAL 1611

Query: 89   VNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRS 148
            +NLATAQVEYSEDQ AMV+VP +FSVVTKH GYL+QT G +EV++WLYAINPLLAGQIRS
Sbjct: 1612 INLATAQVEYSEDQLAMVKVPNTFSVVTKHRGYLLQTLGDKEVYDWLYAINPLLAGQIRS 1671

Query: 149  KTSRRQPPASPALGPSSTQCLP 170
            K +R+ P A+     S    +P
Sbjct: 1672 KLARKGPAATNLNNASPVGLIP 1693

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380016605|ref|XP_003692269.1| PREDICTED: LOW QUALITY PROTEIN: kinesin-like protein unc-104-like [Apis florea]

 Score =  225 bits (573), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 104/142 (73%), Positives = 123/142 (86%)

Query: 29   SVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERAL 88
            +++LYVPE+EEIRISPV++RKGYLN+LE KTNGWKKRWVAVRRPYV IFR+EKDPVERAL
Sbjct: 1552 NLVLYVPEVEEIRISPVIARKGYLNVLEHKTNGWKKRWVAVRRPYVLIFREEKDPVERAL 1611

Query: 89   VNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRS 148
            +NLATAQVEYSEDQ AMV+VP +FSVVTKH GYL+QT G +EV++WLYAINPLLAGQIRS
Sbjct: 1612 INLATAQVEYSEDQLAMVKVPNTFSVVTKHRGYLLQTLGDKEVYDWLYAINPLLAGQIRS 1671

Query: 149  KTSRRQPPASPALGPSSTQCLP 170
            K +R+ P A+     S    +P
Sbjct: 1672 KLARKGPMATNLNNASPVGLVP 1693

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350399498|ref|XP_003485547.1| PREDICTED: kinesin-like protein unc-104-like isoform 1 [Bombus impatiens]

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 101/127 (79%), Positives = 118/127 (92%)

Query: 29   SVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERAL 88
            +++LYVPE+EEIRISPV++RKGYLN+LE KTNGWKKRWVAVRRPYV IFR+EKDPVERAL
Sbjct: 1538 NLVLYVPEVEEIRISPVIARKGYLNVLEHKTNGWKKRWVAVRRPYVLIFREEKDPVERAL 1597

Query: 89   VNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRS 148
            +NLATAQVEYSEDQ AMV+VP +FSVVTKH GYL+QT G +EV++WLYAINPLLAGQIRS
Sbjct: 1598 INLATAQVEYSEDQLAMVKVPNTFSVVTKHRGYLLQTLGDKEVYDWLYAINPLLAGQIRS 1657

Query: 149  KTSRRQP 155
            K +R+ P
Sbjct: 1658 KLARKGP 1664

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340721053|ref|XP_003398941.1| PREDICTED: kinesin-like protein unc-104-like isoform 1 [Bombus terrestris]

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 101/127 (79%), Positives = 118/127 (92%)

Query: 29   SVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERAL 88
            +++LYVPE+EEIRISPV++RKGYLN+LE KTNGWKKRWVAVRRPYV IFR+EKDPVERAL
Sbjct: 1538 NLVLYVPEVEEIRISPVIARKGYLNVLEHKTNGWKKRWVAVRRPYVLIFREEKDPVERAL 1597

Query: 89   VNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRS 148
            +NLATAQVEYSEDQ AMV+VP +FSVVTKH GYL+QT G +EV++WLYAINPLLAGQIRS
Sbjct: 1598 INLATAQVEYSEDQLAMVKVPNTFSVVTKHRGYLLQTLGDKEVYDWLYAINPLLAGQIRS 1657

Query: 149  KTSRRQP 155
            K +R+ P
Sbjct: 1658 KLARKGP 1664

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
UNIPROTKB|Q7PHR1	1644	unc-104 "Kinesin-like protein	0.719	0.074	0.780	1.9e-47
UNIPROTKB|Q17BU3	1644	unc-104 "Kinesin-like protein	0.719	0.074	0.764	1.1e-46
UNIPROTKB|Q28WQ1	1671	unc-104 "Kinesin-like protein	0.789	0.080	0.715	1.1e-46
FB|FBgn0034155	1670	unc-104 "unc-104 ortholog" [Dr	0.789	0.080	0.708	4.8e-46
UNIPROTKB|J9NTH3	443	J9NTH3 "Uncharacterized protei	0.818	0.316	0.548	2.1e-38
UNIPROTKB|Q12756	1690	KIF1A "Kinesin-like protein KI	0.824	0.083	0.559	4.7e-38
RGD|2323765	1147	LOC100362928 "axonal transport	0.824	0.122	0.552	5.1e-38
UNIPROTKB|O60333	1816	KIF1B "Kinesin-like protein KI	0.730	0.068	0.616	7e-38
UNIPROTKB|E1BBN7	1818	Bt.102812 "Uncharacterized pro	0.713	0.067	0.622	7.1e-38
UNIPROTKB|J9NUM7	1347	KIF1B "Uncharacterized protein	0.730	0.092	0.608	1.6e-37

UNIPROTKB|Q7PHR1 unc-104 "Kinesin-like protein unc-104" [Anopheles gambiae (taxid:7165)]

 Score = 510 (184.6 bits), Expect = 1.9e-47, P = 1.9e-47
 Identities = 96/123 (78%), Positives = 110/123 (89%)

Query:    25 TQDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPV 84
             TQD S+ LYVPE+EEIR+SPVV+RKGYLN+LE   +GWKKRWV VRRPYVFIFR +KDPV
Sbjct:  1522 TQDLSLRLYVPELEEIRVSPVVARKGYLNVLEHGGSGWKKRWVTVRRPYVFIFRSDKDPV 1581

Query:    85 ERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAG 144
             ERA++NLATAQVE SEDQ AMV+VP +FSVVTKH GYL+QT G +EVH+WLYAINPLLAG
Sbjct:  1582 ERAVLNLATAQVECSEDQAAMVKVPNTFSVVTKHRGYLLQTLGDKEVHDWLYAINPLLAG 1641

Query:   145 QIR 147
             QIR
Sbjct:  1642 QIR 1644

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0047496 "vesicle transport along microtubule" evidence=ISS

GO:0048489 "synaptic vesicle transport" evidence=ISS

UNIPROTKB|Q17BU3 unc-104 "Kinesin-like protein unc-104" [Aedes aegypti (taxid:7159)]

 Score = 503 (182.1 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 94/123 (76%), Positives = 110/123 (89%)

Query:    25 TQDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPV 84
             +Q+ S+ LYVPE+EEIR+SPVV+RKGYLN+LE   +GWKKRWV VRRPYVFIFR +KDPV
Sbjct:  1522 SQEVSLRLYVPELEEIRVSPVVARKGYLNVLEHGGSGWKKRWVTVRRPYVFIFRSDKDPV 1581

Query:    85 ERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAG 144
             ERA++NLATAQVE SEDQ AMV+VP +FSVVTKH GYL+QT G +EVH+WLYAINPLLAG
Sbjct:  1582 ERAVLNLATAQVECSEDQAAMVKVPNTFSVVTKHRGYLLQTLGDKEVHDWLYAINPLLAG 1641

Query:   145 QIR 147
             QIR
Sbjct:  1642 QIR 1644

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0047496 "vesicle transport along microtubule" evidence=ISS

GO:0048489 "synaptic vesicle transport" evidence=ISS

UNIPROTKB|Q28WQ1 unc-104 "Kinesin-like protein unc-104" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 503 (182.1 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 98/137 (71%), Positives = 116/137 (84%)

Query:    24 ATQDTSVI-LYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD 82
             ATQ    + LYVPE+EEIR+SPVV+RKG LN+LE   +GWKKRWV VRRPYVFI+R EKD
Sbjct:  1516 ATQPALPLRLYVPELEEIRVSPVVARKGLLNVLEHGGSGWKKRWVTVRRPYVFIYRSEKD 1575

Query:    83 PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLL 142
             PVERA++NLATAQVE SEDQ AMV++P +FSVVTKH GYL+QT G +EVH+WLYAINPLL
Sbjct:  1576 PVERAVLNLATAQVECSEDQAAMVKIPNTFSVVTKHRGYLLQTLGDKEVHDWLYAINPLL 1635

Query:   143 AGQIRSKTSRRQ-PPAS 158
             AGQI+S+ +RR   PAS
Sbjct:  1636 AGQIKSRLARRTLEPAS 1652

GO:0003674 "molecular_function" evidence=ND

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0047496 "vesicle transport along microtubule" evidence=ISS

GO:0048489 "synaptic vesicle transport" evidence=ISS

FB|FBgn0034155 unc-104 "unc-104 ortholog" [Drosophila melanogaster (taxid:7227)]

 Score = 497 (180.0 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 97/137 (70%), Positives = 115/137 (83%)

Query:    24 ATQDTSVI-LYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD 82
             ATQ    + LYVPE+EEIR+SPVV+RKG LN+LE   +GWKKRWV VRRPYVFI+R EKD
Sbjct:  1515 ATQPALPLRLYVPELEEIRVSPVVARKGLLNVLEHGGSGWKKRWVIVRRPYVFIYRSEKD 1574

Query:    83 PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLL 142
             PVERA++NLATA VE SEDQ AMV++P +FSVVTKH GYL+QT G +EVH+WLYAINPLL
Sbjct:  1575 PVERAVLNLATAHVECSEDQAAMVKIPNTFSVVTKHRGYLLQTLGDKEVHDWLYAINPLL 1634

Query:   143 AGQIRSKTSRRQ-PPAS 158
             AGQI+S+ +RR   PAS
Sbjct:  1635 AGQIKSRLARRTLEPAS 1651

GO:0003777 "microtubule motor activity" evidence=ISS

GO:0005871 "kinesin complex" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IMP

GO:0048489 "synaptic vesicle transport" evidence=IMP

GO:0016188 "synaptic vesicle maturation" evidence=IMP

GO:0047496 "vesicle transport along microtubule" evidence=IMP

GO:0016192 "vesicle-mediated transport" evidence=IMP

GO:0007528 "neuromuscular junction development" evidence=IMP

GO:0008345 "larval locomotory behavior" evidence=IMP

GO:0048490 "anterograde synaptic vesicle transport" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

UNIPROTKB|J9NTH3 J9NTH3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 79/144 (54%), Positives = 109/144 (75%)

Query:    14 DSRGRPD---SNEATQDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVR 70
             DS+  P    + EA ++   +L VP+I+EIR+SP+VS+KGYL+ LE  T GW KR+V VR
Sbjct:   295 DSKKLPSPARAAEADKEPQRLL-VPDIQEIRVSPIVSKKGYLHFLEPHTAGWAKRFVVVR 353

Query:    71 RPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGARE 130
             RPY +++  +KD VER ++NL+TAQVEYSEDQQAM++ P +F+V T+H G L+Q    ++
Sbjct:   354 RPYAYLYNSDKDSVERFVLNLSTAQVEYSEDQQAMLKTPNTFAVCTEHRGILLQANSDKD 413

Query:   131 VHEWLYAINPLLAGQIRSKTSRRQ 154
             +H+WLYA NPLLAG IRSK SRR+
Sbjct:   414 MHDWLYAFNPLLAGTIRSKLSRRR 437

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|Q12756 KIF1A "Kinesin-like protein KIF1A" [Homo sapiens (taxid:9606)]

 Score = 422 (153.6 bits), Expect = 4.7e-38, P = 4.7e-38
 Identities = 80/143 (55%), Positives = 108/143 (75%)

Query:    14 DSRGRPDSNEATQDTSVI--LYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRR 71
             DS+  P    AT+       L VP+I+EIR+SP+VS+KGYL+ LE  T+GW +R+V VRR
Sbjct:  1542 DSKKLPSPARATETDKEPQRLLVPDIQEIRVSPIVSKKGYLHFLEPHTSGWARRFVVVRR 1601

Query:    72 PYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREV 131
             PY +++  +KD VER ++NLATAQVEYSEDQQAM++ P +F+V T+H G L+Q A  +++
Sbjct:  1602 PYAYMYNSDKDTVERFVLNLATAQVEYSEDQQAMLKTPNTFAVCTEHRGILLQAASDKDM 1661

Query:   132 HEWLYAINPLLAGQIRSKTSRRQ 154
             H+WLYA NPLLAG IRSK SRR+
Sbjct:  1662 HDWLYAFNPLLAGTIRSKLSRRR 1684

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0008219 "cell death" evidence=IEA

GO:0003774 "motor activity" evidence=TAS

GO:0008089 "anterograde axon cargo transport" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

RGD|2323765 LOC100362928 "axonal transport of synaptic vesicles-like" [Rattus norvegicus (taxid:10116)]

 Score = 413 (150.4 bits), Expect = 5.1e-38, Sum P(2) = 5.1e-38
 Identities = 79/143 (55%), Positives = 106/143 (74%)

Query:    14 DSRGRPDSNEATQDTSVI--LYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRR 71
             DS+  P    AT+       L VP+I+EIR+SP+VS+KGYL+ LE  T GW KR+V VRR
Sbjct:   999 DSKKTPSPVRATETEKEPQRLLVPDIQEIRVSPIVSKKGYLHFLEPHTAGWAKRFVVVRR 1058

Query:    72 PYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREV 131
             PY +++  +KD VER ++NL+TAQVEYSEDQQAM++ P +F+V T+H G L+Q    +++
Sbjct:  1059 PYAYMYNSDKDTVERFVLNLSTAQVEYSEDQQAMLKTPNTFAVCTEHRGILLQANSDKDM 1118

Query:   132 HEWLYAINPLLAGQIRSKTSRRQ 154
             H+WLYA NPLLAG IRSK SRR+
Sbjct:  1119 HDWLYAFNPLLAGTIRSKLSRRR 1141

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

UNIPROTKB|O60333 KIF1B "Kinesin-like protein KIF1B" [Homo sapiens (taxid:9606)]

 Score = 402 (146.6 bits), Expect = 7.0e-38, Sum P(2) = 7.0e-38
 Identities = 77/125 (61%), Positives = 96/125 (76%)

Query:    34 VPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLAT 93
             VP+IEEIR S VVS+KGYL+  E   + W K +V VRRPYVFI+  +KDPVER ++NL+T
Sbjct:  1690 VPDIEEIRPSSVVSKKGYLHFKEPLYSNWAKHFVVVRRPYVFIYNSDKDPVERGIINLST 1749

Query:    94 AQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRR 153
             AQVEYSEDQQAMV+ P +F+V TKH G L+Q    +++++WLYA NPLLAG IRSK SRR
Sbjct:  1750 AQVEYSEDQQAMVKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTIRSKLSRR 1809

Query:   154 QPPAS 158
              P  S
Sbjct:  1810 CPSQS 1814

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0047497 "mitochondrion transport along microtubule" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0019894 "kinesin binding" evidence=TAS

GO:0016887 "ATPase activity" evidence=ISS

GO:0008089 "anterograde axon cargo transport" evidence=ISS

GO:0030659 "cytoplasmic vesicle membrane" evidence=ISS

GO:0030705 "cytoskeleton-dependent intracellular transport" evidence=ISS

GO:0003777 "microtubule motor activity" evidence=ISS

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0007018 "microtubule-based movement" evidence=ISS

GO:0007270 "neuron-neuron synaptic transmission" evidence=ISS

GO:0007274 "neuromuscular synaptic transmission" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0031410 "cytoplasmic vesicle" evidence=ISS

GO:0043005 "neuron projection" evidence=ISS

UNIPROTKB|E1BBN7 Bt.102812 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 402 (146.6 bits), Expect = 7.1e-38, Sum P(2) = 7.1e-38
 Identities = 76/122 (62%), Positives = 95/122 (77%)

Query:    34 VPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLAT 93
             VP+IEEIR   VVS+KGYL+  E  ++ W K +V VRRPYVFI+  +KDPVER ++NL+T
Sbjct:  1692 VPDIEEIRPGSVVSKKGYLHFKEPLSSNWAKHFVVVRRPYVFIYNSDKDPVERGIINLST 1751

Query:    94 AQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRR 153
             AQVEYSEDQQAMV+ P +F+V TKH G L+Q    ++V++WLYA NPLLAG IRSK SRR
Sbjct:  1752 AQVEYSEDQQAMVKTPNTFAVCTKHRGVLLQALNDKDVNDWLYAFNPLLAGTIRSKLSRR 1811

Query:   154 QP 155
              P
Sbjct:  1812 CP 1813

GO:0047497 "mitochondrion transport along microtubule" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0008089 "anterograde axon cargo transport" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0007270 "neuron-neuron synaptic transmission" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|J9NUM7 KIF1B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 395 (144.1 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
 Identities = 76/125 (60%), Positives = 94/125 (75%)

Query:    34 VPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLAT 93
             VP+IEEIR   VVS+KGYL+  E   + W K +V VRRPYVFI+  +KDPVER ++NL+T
Sbjct:  1221 VPDIEEIRPGSVVSKKGYLHFKEPLYSNWAKHFVVVRRPYVFIYNSDKDPVERGIINLST 1280

Query:    94 AQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRR 153
             AQVEYSEDQQAMV+ P  F+V TKH G L+Q    +++++WLYA NPLLAG IRSK SRR
Sbjct:  1281 AQVEYSEDQQAMVKTPNIFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTIRSKLSRR 1340

Query:   154 QPPAS 158
              P  S
Sbjct:  1341 CPSES 1345

GO:0005543 "phospholipid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7PHR1	KIF1A_ANOGA	No assigned EC number	0.7804	0.7192	0.0748	yes	N/A
P33173	KIF1A_MOUSE	No assigned EC number	0.6016	0.7192	0.0725	yes	N/A
Q12756	KIF1A_HUMAN	No assigned EC number	0.6097	0.7192	0.0727	yes	N/A
P23678	UN104_CAEEL	No assigned EC number	0.5144	0.7777	0.0839	yes	N/A
A1ZAJ2	KIF1A_DROME	No assigned EC number	0.7343	0.7426	0.0760	yes	N/A
Q28WQ1	KIF1A_DROPS	No assigned EC number	0.7421	0.7426	0.0760	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	171
cd01233	111	cd01233, PH_KIFIA_KIFIB, KIFIA and KIFIB protein p	2e-57
pfam00169	101	pfam00169, PH, PH domain	2e-12
smart00233	102	smart00233, PH, Pleckstrin homology domain	2e-11
cd00821	92	cd00821, PH, Pleckstrin homology (PH) domain	4e-06
cd13298	106	cd13298, PH1_PH_fungal, Fungal proteins Pleckstrin	4e-06
cd13282	96	cd13282, PH1_PLEKHH1_PLEKHH2, Pleckstrin homology	2e-04
cd13255	110	cd13255, PH_TAAP2-like, Tandem PH-domain-containin	5e-04
cd13276	117	cd13276, PH_AtPH1, Arabidopsis thaliana Pleckstrin	8e-04
cd01265	101	cd01265, PH_TBC1D2A, TBC1 domain family member 2A	8e-04
cd10573	96	cd10573, PH_DAPP1, Dual Adaptor for Phosphotyrosin	0.001
cd13251	108	cd13251, PH_ASAP, ArfGAP with SH3 domain, ankyrin	0.004

>gnl|CDD|241266 cd01233, PH_KIFIA_KIFIB, KIFIA and KIFIB protein pleckstrin homology (PH) domain

 Score =  174 bits (444), Expect = 2e-57
 Identities = 60/111 (54%), Positives = 80/111 (72%)

Query: 33  YVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLA 92
            V E+E I  SPVVS+KGYL  LE  T+GW +RWV +RRPY+ I+  EKD  ER ++NL+
Sbjct: 1   LVAEVELIPKSPVVSKKGYLLFLEDATDGWVRRWVVLRRPYLHIYSSEKDGDERGVINLS 60

Query: 93  TAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLA 143
           TA+VEYS DQ+A++  P  F+V T    YL+Q    +E+H+WLYAI+PLLA
Sbjct: 61  TARVEYSPDQEALLGRPNVFAVYTPTNSYLLQARSEKEMHDWLYAIDPLLA 111

The kinesin-3 family motors KIFIA (Caenorhabditis elegans homolog unc-104) and KIFIB transport synaptic vesicle precursors that contain synaptic vesicle proteins, such as synaptophysin, synaptotagmin and the small GTPase RAB3A, but they do not transport organelles that contain plasma membrane proteins. They have a N-terminal motor domain, followed by a coiled-coil domain, and a C-terminal PH domain. KIF1A adopts a monomeric form in vitro, but acts as a processive dimer in vivo. KIF1B has alternatively spliced isoforms distinguished by the presence or absence of insertion sequences in the conserved amino-terminal region of the protein; this results in their different motor activities. KIF1A and KIF1B bind to RAB3 proteins through the adaptor protein mitogen-activated protein kinase (MAPK) -activating death domain (MADD; also calledDENN), which was first identified as a RAB3 guanine nucleotide exchange factor (GEF). PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 111

>gnl|CDD|215766 pfam00169, PH, PH domain

 Score = 60.2 bits (146), Expect = 2e-12
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 46  VSRKGYLNILEQ-KTNGWKKRWVAVRRPYVFIFRDEKDPVER--ALVNLATAQVEYSEDQ 102
           V ++G+L          WKKR+  +    +  ++D K    R    + L+  QV    D 
Sbjct: 1   VIKEGWLLKKGSGGRKSWKKRYFVLFDGVLLYYKDSKKSSSRPKGSIPLSGCQVTKVPDS 60

Query: 103 QAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
           +   R    F + T     +L+Q     E  EW+ AI 
Sbjct: 61  EDGKR-KNCFEIRTGDRETFLLQAESEEERKEWVKAIR 97

PH stands for pleckstrin homology. Length = 101

>gnl|CDD|214574 smart00233, PH, Pleckstrin homology domain

 Score = 57.2 bits (138), Expect = 2e-11
 Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 6/99 (6%)

Query: 46  VSRKGYLNILEQKTN-GWKKRWVAVRRPYVFIFRDEK---DPVERALVNLATAQVEYSED 101
           V ++G+L          WKKR+  +    +  ++ +K       +  ++L+   V  + D
Sbjct: 1   VIKEGWLYKKSGGGKKSWKKRYFVLFNSTLLYYKSKKDKKSYKPKGSIDLSGCTVREAPD 60

Query: 102 QQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
             +  + P  F + T      L+Q     E  +W+ A+ 
Sbjct: 61  PDSSKK-PHCFEIKTSDRKTLLLQAESEEEREKWVEALR 98

Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. Length = 102

>gnl|CDD|241231 cd00821, PH, Pleckstrin homology (PH) domain

 Score = 43.1 bits (101), Expect = 4e-06
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 48  RKGYLNILEQKTN-GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMV 106
           ++G+L     K    WKKRW  +    +  ++ +KD  ++    +         +  +  
Sbjct: 1   KEGWLKKRGGKGLKSWKKRWFVLFDDVLLYYKSKKDSSKKPKGLIPL-SDGLEVELVSSS 59

Query: 107 RVPFSFSVVTKHGG--YLMQTAGAREVHEWLYA 137
             P  F +VT   G  Y +Q     E  EWL A
Sbjct: 60  GKPNCFELVTPDRGRTYYLQAESEEEREEWLEA 92

PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 92

>gnl|CDD|241452 cd13298, PH1_PH_fungal, Fungal proteins Pleckstrin homology (PH) domain, repeat 1

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 17/109 (15%)

Query: 35  PEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNL--- 91
            E + +  S      G+L    +KT  WKKRW  +R   +  ++DEK+   R ++NL   
Sbjct: 1   FEFDRVLKS------GWLLKRSRKTKTWKKRWFVLRPCQLSYYKDEKEYKLRRVINLSEL 54

Query: 92  -ATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
            A A ++         +    F++ T    Y  Q +  ++ +EW+ AI 
Sbjct: 55  TAVAPLK-------DKKRKNVFAIYTPSKNYHFQASSEKDANEWVEAIR 96

The functions of these fungal proteins are unknown, but they all contain 2 PH domains. This cd represents the first PH repeat. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 106

>gnl|CDD|241436 cd13282, PH1_PLEKHH1_PLEKHH2, Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 10/101 (9%)

Query: 48  RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERAL--VNL-ATAQVEYSEDQQA 104
           + GYL  L  K   WK+RW  ++   +F ++   D + +    + L  + ++  +E  Q 
Sbjct: 1   KAGYLTKLGGKVKTWKRRWFVLKNGELFYYKSPNDVIRKPQGQIALDGSCEIARAEGAQ- 59

Query: 105 MVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQ 145
                 +F +VT+   Y +      ++ EW+  I  +L  Q
Sbjct: 60  ------TFEIVTEKRTYYLTADSENDLDEWIRVIQNVLRRQ 94

PLEKHH1 and PLEKHH2 (also called PLEKHH1L) are thought to function in phospholipid binding and signal transduction. There are 3 Human PLEKHH genes: PLEKHH1, PLEKHH2, and PLEKHH3. There are many isoforms, the longest of which contain a FERM domain, a MyTH4 domain, two PH domains, a peroximal domain, a vacuolar domain, and a coiled coil stretch. The FERM domain has a cloverleaf tripart structure (FERM_N, FERM_M, FERM_C/N, alpha-, and C-lobe/A-lobe, B-lobe, C-lobe/F1, F2, F3). The C-lobe/F3 within the FERM domain is part of the PH domain family. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 96

>gnl|CDD|241409 cd13255, PH_TAAP2-like, Tandem PH-domain-containing protein 2 Pleckstrin homology (PH) domain

 Score = 37.4 bits (87), Expect = 5e-04
 Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 11/102 (10%)

Query: 42  ISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNL----ATAQVE 97
           IS  V + GYL    ++   WKKRW  +R   +  ++++K+     L++L       +V+
Sbjct: 2   ISEAVLKAGYLEKKGERRKTWKKRWFVLRPTKLAYYKNDKEYRLLRLIDLTDIHTCTEVQ 61

Query: 98  YSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
                  + +   +F +VT    + +Q     E+  W+ AIN
Sbjct: 62  -------LKKHDNTFGIVTPARTFYVQADSKAEMESWISAIN 96

The binding of TAPP2 (also called PLEKHA2) adaptors to PtdIns(3,4)P(2), but not PI(3,4, 5)P3, function as negative regulators of insulin and PI3K signalling pathways (i.e. TAPP/utrophin/syntrophin complex). TAPP2 contains two sequential PH domains in which the C-terminal PH domain specifically binds PtdIns(3,4)P2 with high affinity. The N-terminal PH domain does not interact with any phosphoinositide tested. They also contain a C-terminal PDZ-binding motif that interacts with several PDZ-binding proteins, including PTPN13 (known previously as PTPL1 or FAP-1) as well as the scaffolding proteins MUPP1 (multiple PDZ-domain-containing protein 1), syntrophin and utrophin. The members here are most sequence similar to TAPP2 proteins, but may not be actual TAPP2 proteins. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 110

>gnl|CDD|241430 cd13276, PH_AtPH1, Arabidopsis thaliana Pleckstrin homolog (PH) 1 (AtPH1) PH domain

 Score = 37.0 bits (86), Expect = 8e-04
 Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 18/120 (15%)

Query: 48  RKGYLNILEQKTNG----WKKRWVAVRRPYVFIFRDEK-DPVERALVNLA-TAQVEYSED 101
           + G+L     K  G    W++RW  +++  +F F+DE  D   R +++L+    V+ +E+
Sbjct: 9   KAGWL----TKQGGSIKTWRRRWFVLKQGKLFYFKDEDPDSEPRGVIDLSDCLTVKSAEE 64

Query: 102 QQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPASPAL 161
                   F+F V T    + +     +E  EW+ AI   +      K SR +      L
Sbjct: 65  A---TNKEFAFEVSTPERTFYLIADSEKEKEEWISAIGRAIV-----KLSRSKGTIDEVL 116

AtPH1 is expressed in all plant tissue and is proposed to be the plant homolog of human pleckstrin. Pleckstrin consists of two PH domains separated by a linker region, while AtPH has a single PH domain with a short N-terminal extension. AtPH1 binds PtdIns3P specifically and is thought to be an adaptor molecule since it has no obvious catalytic functions. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 117

>gnl|CDD|241296 cd01265, PH_TBC1D2A, TBC1 domain family member 2A pleckstrin homology (PH) domain

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 9/90 (10%)

Query: 50  GYLNILEQKT--NGWKKRWVAV--RRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAM 105
           GYLN LE K     WK RW     R+  ++ +R  +D      ++L+ A   Y  + +  
Sbjct: 4   GYLNKLETKGLLKTWKSRWFVFDERKCQLYYYRSPQDITPLGSIDLSGAAFSYDPEAE-- 61

Query: 106 VRVPFSFSVVTKHGGYLMQTAGAREVHEWL 135
                +F + T    Y+++ +  + +  WL
Sbjct: 62  ---KGTFEIHTPGRVYILKASDRQAMLYWL 88

TBC1D2A (also called PARIS-1/Prostate antigen recognized and identified by SEREX 1 and ARMUS) contains a PH domain and a TBC-type GTPase catalytic domain. TBC1D2A integrates signaling between Arf6, Rac1, and Rab7 during junction disassembly. Activated Rac1 recruits TBC1D2A to locally inactivate Rab7 via its C-terminal TBC/RabGAP domain and facilitate E-cadherin degradation in lysosomes. The TBC1D2A PH domain mediates localization at cell-cell contacts and coprecipitates with cadherin complexes. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 101

>gnl|CDD|241309 cd10573, PH_DAPP1, Dual Adaptor for Phosphotyrosine and 3-Phosphoinositides Pleckstrin homology (PH) domain

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 44  PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQ-VEYSEDQ 102
            + S++GYL         WK RW  +R+  +  F+   D      ++L     V+    Q
Sbjct: 1   SLASKEGYLTKQGGIVKNWKTRWFVLRKNELKYFKTRTDTKPIRTLDLTECSSVQADYSQ 60

Query: 103 QAMVRVPFSFSVVTKHGGYLMQTAGAREVHEW 134
                 P  F +V     + M      E  EW
Sbjct: 61  GK----PNCFRLVFPDRTFYMYAKTEEEADEW 88

DAPP1 (also known as PHISH/3' phosphoinositide-interacting SH2 domain-containing protein or Bam32) plays a role in B-cell activation and has potential roles in T-cell and mast cell function. DAPP1 promotes B cell receptor (BCR) induced activation of Rho GTPases Rac1 and Cdc42, which feed into mitogen-activated protein kinases (MAPK) activation pathways and affect cytoskeletal rearrangement. DAPP1can also regulate BCR-induced activation of extracellular signal-regulated kinase (ERK), and c-jun NH2-terminal kinase (JNK). DAPP1 contains an N-terminal SH2 domain and a C-terminal pleckstrin homology (PH) domain with a single tyrosine phosphorylation site located centrally. DAPP1 binds strongly to both PtdIns(3,4,5)P3 and PtdIns(3,4)P2. The PH domain is essential for plasma membrane recruitment of PI3K upon cell activation. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 96

>gnl|CDD|241405 cd13251, PH_ASAP, ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain

 Score = 35.0 bits (81), Expect = 0.004
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 19/104 (18%)

Query: 43  SPVVSRKGYLNILEQKTNG-----WKKRWVAVRRPYVFIFRDE--KDPVERALVNLATAQ 95
                + GYL    +K+ G     W+KR  ++R  ++ I   +  K PV+   +NL T Q
Sbjct: 7   EHGTEKSGYL---LKKSEGKLRKVWQKRRCSIRNGFLTISHSDENKPPVK---LNLLTCQ 60

Query: 96  VEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
           V+ + +          F +++ +  Y  Q    +E   W+  + 
Sbjct: 61  VKPNPED------KKCFDLISHNRTYHFQAEDEQEAEAWISVLQ 98

ASAPs (ASAP1, ASAP2, and ASAP3) function as an Arf-specific GAPs, participates in rhodopsin trafficking, is associated with tumor cell metastasis, modulates phagocytosis, promotes cell proliferation, facilitates vesicle budding, Golgi exocytosis, and regulates vesicle coat assembly via a Bin/Amphiphysin/Rvs domain. ASAPs contain an NH2-terminal BAR domain, a tandem PH domain/GAP domain, three ankyrin repeats, two proline-rich regions, and a COOH-terminal Src homology 3 (SH3) domain. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	171
cd01233	100	Unc104 Unc-104 pleckstrin homology (PH) domain. Un	99.97
cd01251	103	PH_centaurin_alpha Centaurin alpha Pleckstrin homo	99.95
cd01265	95	PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain	99.94
cd01238	106	PH_Tec Tec pleckstrin homology (PH) domain. Tec pl	99.93
cd01264	101	PH_melted Melted pleckstrin homology (PH) domain.	99.93
cd01260	96	PH_CNK Connector enhancer of KSR (Kinase suppresso	99.93
cd01257	101	PH_IRS Insulin receptor substrate (IRS) pleckstrin	99.93
cd01247	91	PH_GPBP Goodpasture antigen binding protein (GPBP)	99.92
cd01235	101	PH_SETbf Set binding factor Pleckstrin Homology (P	99.92
cd01252	125	PH_cytohesin Cytohesin Pleckstrin homology (PH) do	99.92
cd01266	108	PH_Gab Gab (Grb2-associated binder) pleckstrin hom	99.91
cd01236	104	PH_outspread Outspread Pleckstrin homology (PH) do	99.91
cd01245	98	PH_RasGAP_CG5898 RAS GTPase-activating protein (GA	99.9
cd01246	91	PH_oxysterol_bp Oxysterol binding protein (OSBP) P	99.89
cd01250	94	PH_centaurin Centaurin Pleckstrin homology (PH) do	99.89
cd01241	102	PH_Akt Akt pleckstrin homology (PH) domain. Akt pl	99.87
PF00169	104	PH: PH domain; InterPro: IPR001849 The pleckstrin	99.87
cd01244	98	PH_RasGAP_CG9209 RAS_GTPase activating protein (GA	99.86
KOG0930|consensus	395		99.84
cd01219	101	PH_FGD FGD (faciogenital dysplasia protein) plecks	99.79
cd01263	122	PH_anillin Anillin Pleckstrin homology (PH) domain	99.77
cd01253	104	PH_beta_spectrin Beta-spectrin pleckstrin homology	99.76
cd01254	121	PH_PLD Phospholipase D (PLD) pleckstrin homology (	99.75
PF15409	89	PH_8: Pleckstrin homology domain	99.75
PF15413	112	PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE	99.72
smart00233	102	PH Pleckstrin homology domain. Domain commonly fou	99.72
cd01220	99	PH_CDEP Chondrocyte-derived ezrin-like domain cont	99.7
cd01230	117	PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6	99.7
cd00821	96	PH Pleckstrin homology (PH) domain. Pleckstrin hom	99.64
cd01237	106	Unc112 Unc-112 pleckstrin homology (PH) domain. Un	99.63
cd00900	99	PH-like Pleckstrin homology-like domain. Pleckstri	99.61
PF15410	119	PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN	99.6
cd01256	110	PH_dynamin Dynamin pleckstrin homology (PH) domain	99.59
cd01234	117	PH_CADPS CADPS (Ca2+-dependent activator protein)	99.43
KOG1090|consensus	1732		99.36
cd01218	104	PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain	99.35
cd01249	104	PH_oligophrenin Oligophrenin Pleckstrin homology (	99.29
cd01239	117	PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin hom	99.24
KOG0690|consensus	516		99.22
PF14593	104	PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.	99.2
cd01261	112	PH_SOS Son of Sevenless (SOS) Pleckstrin homology	99.11
KOG2059|consensus	800		99.05
cd01243	122	PH_MRCK MRCK (myotonic dystrophy-related Cdc42-bin	99.04
cd01242	112	PH_ROK Rok (Rho- associated kinase) pleckstrin hom	98.97
cd01259	114	PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor pr	98.95
KOG0521|consensus	785		98.91
KOG3640|consensus	1116		98.87
PTZ00267	478	NIMA-related protein kinase; Provisional	98.79
KOG0248|consensus	936		98.74
cd01258	108	PH_syntrophin Syntrophin pleckstrin homology (PH)	98.62
PLN02866	1068	phospholipase D	98.57
cd01262	89	PH_PDK1 3-Phosphoinositide dependent protein kinas	98.57
KOG1117|consensus	1186		98.53
PF12814	123	Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin	98.5
KOG0932|consensus	774		98.47
KOG1739|consensus	611		98.43
KOG3751|consensus	622		98.42
cd01240	116	PH_beta-ARK Beta adrenergic receptor kinase 1(beta	98.41
cd01222	97	PH_clg Clg (common-site lymphoma/leukemia guanine	98.41
cd01226	100	PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin	98.29
PTZ00283	496	serine/threonine protein kinase; Provisional	98.26
cd01224	109	PH_Collybistin Collybistin pleckstrin homology (PH	98.16
PLN00188	719	enhanced disease resistance protein (EDR2); Provis	98.15
KOG4424|consensus	623		98.1
KOG3531|consensus	1036		98.07
KOG3723|consensus	851		98.04
cd01225	111	PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-	97.99
cd01221	125	PH_ephexin Ephexin Pleckstrin homology (PH) domain	97.98
KOG1117|consensus	1186		97.9
cd01228	96	PH_BCR-related BCR (breakpoint cluster region)-rel	97.78
KOG3543|consensus	1218		97.72
cd01232	114	PH_TRIO Trio pleckstrin homology (PH) domain. Trio	97.7
cd01231	107	PH_Lnk LNK-family Pleckstrin homology (PH) domain.	97.67
PF15406	112	PH_6: Pleckstrin homology domain	97.61
PF15404	185	PH_4: Pleckstrin homology domain	97.5
cd01227	133	PH_Dbs Dbs (DBL's big sister) pleckstrin homology	97.35
KOG1738|consensus	638		97.33
KOG1737|consensus	799		97.31
KOG1451|consensus	812		97.27
cd01223	116	PH_Vav Vav pleckstrin homology (PH) domain. Vav pl	97.08
KOG4424|consensus	623		97.04
KOG4236|consensus	888		96.82
KOG0705|consensus	749		96.76
PF15408	104	PH_7: Pleckstrin homology domain	96.73
cd01248	115	PH_PLC Phospholipase C (PLC) pleckstrin homology (	96.6
KOG1170|consensus	1099		96.27
KOG0248|consensus	936		95.92
KOG3523|consensus	695		95.68
PF15405	135	PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.	95.58
KOG2070|consensus	661		95.42
KOG3549|consensus	505		95.38
PF08458	110	PH_2: Plant pleckstrin homology-like region; Inter	95.37
KOG4807|consensus	593		95.31
cd01255	160	PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM	94.98
KOG4047|consensus	429		93.58
KOG4407|consensus	1973		92.61
KOG1264|consensus	1267		90.52
KOG0517|consensus	2473		87.29
KOG3531|consensus	1036		86.59
KOG0592|consensus	604		86.53
KOG3551|consensus	506		85.11
cd05134	310	RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of	84.24
cd05394	313	RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the	83.54
cd05128	315	RasGAP_GAP1_like The GAP1 family of Ras GTPase-act	83.08
PF06017	199	Myosin_TH1: Myosin tail; InterPro: IPR010926 These	82.64

>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain

Probab=99.97  E-value=2.9e-30  Score=187.39  Aligned_cols=99  Identities=59%  Similarity=1.046  Sum_probs=91.4

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEEe
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQT  125 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~A  125 (171)
                      |+|+|||.|+++..++|+||||||++++|+||+++++..+.|.|+|.++.|...++.....+++++|.|.|++|+|+|+|
T Consensus         2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~~~~~~~~~~F~I~t~~rt~~~~A   81 (100)
T cd01233           2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDKDPVERGVINLSTARVEHSEDQAAMVKGPNTFAVCTKHRGYLFQA   81 (100)
T ss_pred             cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCCCccEeeEEEecccEEEEccchhhhcCCCcEEEEECCCCEEEEEc
Confidence            67999999999999999999999999999999999999999999999998887766554556899999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHhhh
Q psy7933         126 AGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       126 ~s~~E~~~WI~aI~~~~~~  144 (171)
                      +|++||++||++|+..++|
T Consensus        82 ~s~~e~~~Wi~ai~~~~~~  100 (100)
T cd01233          82 LSDKEMIDWLYALNPLYAG  100 (100)
T ss_pred             CCHHHHHHHHHHhhhhhcC
Confidence            9999999999999998764

Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.

>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain

Probab=99.95  E-value=2.8e-27  Score=172.82  Aligned_cols=96  Identities=22%  Similarity=0.429  Sum_probs=79.3

Q ss_pred             EEeEEEeeeCC-CCCceEEEEEEeCCcEEEecCCCCCccceEEECCCe----EEEeecchhhhcCCCcEEEEEeCCceEE
Q psy7933          48 RKGYLNILEQK-TNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATA----QVEYSEDQQAMVRVPFSFSVVTKHGGYL  122 (171)
Q Consensus        48 k~GwL~K~g~~-~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~----~V~~~~~~~~~~~r~~~F~I~t~~rt~~  122 (171)
                      |+|||.|+|+. .++||||||||+++.|+||+++.+..+.|.|+|..+    .|......+......++|.|.|++|+|+
T Consensus         1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~Rty~   80 (103)
T cd01251           1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPLDAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPERKFL   80 (103)
T ss_pred             CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCCCcCcCcEEEeeccccceeEeccCCccccccccceEEEEeCCeEEE
Confidence            68999999987 589999999999999999999999999999999754    3422100000112345999999999999


Q ss_pred             EEeCCHHHHHHHHHHHHHHhh
Q psy7933         123 MQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|+|++||++||+||+.++.
T Consensus        81 l~a~s~~e~~~Wi~ai~~v~~  101 (103)
T cd01251          81 FACETEQDRREWIAAFQNVLS  101 (103)
T ss_pred             EECCCHHHHHHHHHHHHHHhc
Confidence            999999999999999999874

Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici

>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain

Probab=99.94  E-value=2.3e-26  Score=165.69  Aligned_cols=88  Identities=23%  Similarity=0.477  Sum_probs=78.4

Q ss_pred             EeEEEeeeCC--CCCceEEEEEEeC--CcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEE
Q psy7933          49 KGYLNILEQK--TNGWKKRWVAVRR--PYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQ  124 (171)
Q Consensus        49 ~GwL~K~g~~--~~~WkrRWFVL~~--~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~  124 (171)
                      +|||.|+|+.  .++|+||||||++  +.|+||+++.+..++|.|+|.++.+...++     .++++|.|.|++|+|+|+
T Consensus         2 ~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d~~p~G~I~L~~~~~~~~~~-----~~~~~F~i~t~~r~y~l~   76 (95)
T cd01265           2 CGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQDAKPLGRVDLSGAAFTYDPR-----EEKGRFEIHSNNEVIALK   76 (95)
T ss_pred             cccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCcccccceEECCccEEEcCCC-----CCCCEEEEEcCCcEEEEE
Confidence            6999999874  5799999999984  589999999999999999999988765443     247899999999999999


Q ss_pred             eCCHHHHHHHHHHHHHH
Q psy7933         125 TAGAREVHEWLYAINPL  141 (171)
Q Consensus       125 A~s~~E~~~WI~aI~~~  141 (171)
                      |+|++||++||+||+..
T Consensus        77 A~s~~e~~~Wi~al~~~   93 (95)
T cd01265          77 ASSDKQMNYWLQALQSK   93 (95)
T ss_pred             CCCHHHHHHHHHHHHhh
Confidence            99999999999999875

PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01238 PH_Tec Tec pleckstrin homology (PH) domain

Probab=99.93  E-value=9.5e-26  Score=165.53  Aligned_cols=95  Identities=13%  Similarity=0.260  Sum_probs=78.5

Q ss_pred             eEEeEEEeeeCCCC-----CceEEEEEEeCCcEEEecCCCCC--ccceEEECCCeEEEeecchhhh----cCCCcEEEEE
Q psy7933          47 SRKGYLNILEQKTN-----GWKKRWVAVRRPYVFIFRDEKDP--VERALVNLATAQVEYSEDQQAM----VRVPFSFSVV  115 (171)
Q Consensus        47 ~k~GwL~K~g~~~~-----~WkrRWFVL~~~~L~yYk~~~d~--~~~g~I~L~~~~V~~~~~~~~~----~~r~~~F~I~  115 (171)
                      +|+|||.|++...+     +||+|||||+++.|+||+++.+.  .++|.|+|.++.+......+..    ..+.++|.|+
T Consensus         1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i~   80 (106)
T cd01238           1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEKRGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQVV   80 (106)
T ss_pred             CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCcccccCcceeEECCcceEEEEecCCcCcccccccCccEEEE
Confidence            58999999985433     99999999999999999998764  7999999998865443222111    1357999999


Q ss_pred             eCCceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         116 TKHGGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       116 t~~rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                      |++++|+|+|+|++||++||+||+.+
T Consensus        81 t~~r~~yl~A~s~~er~~WI~ai~~~  106 (106)
T cd01238          81 HDEGTLYVFAPTEELRKRWIKALKQV  106 (106)
T ss_pred             eCCCeEEEEcCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999874

Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis

>cd01264 PH_melted Melted pleckstrin homology (PH) domain

Probab=99.93  E-value=1.3e-25  Score=164.02  Aligned_cols=94  Identities=15%  Similarity=0.320  Sum_probs=79.0

Q ss_pred             EEeEEEeeeC---CCCCceEEEEEEeCCcEEEecCCCCCccc-eEEECCCeEEEeecchh-hhcCCCcEEEEEeCCceEE
Q psy7933          48 RKGYLNILEQ---KTNGWKKRWVAVRRPYVFIFRDEKDPVER-ALVNLATAQVEYSEDQQ-AMVRVPFSFSVVTKHGGYL  122 (171)
Q Consensus        48 k~GwL~K~g~---~~~~WkrRWFVL~~~~L~yYk~~~d~~~~-g~I~L~~~~V~~~~~~~-~~~~r~~~F~I~t~~rt~~  122 (171)
                      -+|||.|+|+   ..++|+||||||+++.|+||++..+..+. |+|+|++|..+...+.. ....++|+|+|.|++|+|+
T Consensus         2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~rt~~   81 (101)
T cd01264           2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKTYI   81 (101)
T ss_pred             cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCccCCCCceEEcccceEEeeccccccccccCcEEEEEcCCceEE
Confidence            5899999999   78899999999999999999988665555 99999998655443321 1124579999999999999


Q ss_pred             EEeCCHHHHHHHHHHHHHH
Q psy7933         123 MQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~  141 (171)
                      |+|+|++|+++||++|+.+
T Consensus        82 l~A~se~e~e~WI~~i~~a  100 (101)
T cd01264          82 LKAKDEKNAEEWLQCLNIA  100 (101)
T ss_pred             EEeCCHHHHHHHHHHHHhh
Confidence            9999999999999999865

Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain

Probab=99.93  E-value=2.3e-25  Score=159.40  Aligned_cols=89  Identities=15%  Similarity=0.436  Sum_probs=80.5

Q ss_pred             EEeEEEeeeCCCC----CceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ceEE
Q psy7933          48 RKGYLNILEQKTN----GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GGYL  122 (171)
Q Consensus        48 k~GwL~K~g~~~~----~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt~~  122 (171)
                      ++|||.|++...+    .|++|||||+++.|+||+++.+..+.|.|+|.+++|....+.    .++++|.|.+++ ++|+
T Consensus         2 ~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~----~k~~~F~I~~~~~~~~~   77 (96)
T cd01260           2 CDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQDEKAEGLIFLSGFTIESAKEV----KKKYAFKVCHPVYKSFY   77 (96)
T ss_pred             ceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCCCccceEEEccCCEEEEchhc----CCceEEEECCCCCcEEE
Confidence            6899999986555    999999999999999999999999999999999988765332    478999999998 9999


Q ss_pred             EEeCCHHHHHHHHHHHHH
Q psy7933         123 MQTAGAREVHEWLYAINP  140 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~  140 (171)
                      |+|+|++|+++||.+|+.
T Consensus        78 f~a~s~~e~~~Wi~ai~~   95 (96)
T cd01260          78 FAAETLDDLSQWVNHLIT   95 (96)
T ss_pred             EEeCCHHHHHHHHHHHHh
Confidence            999999999999999986

Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet

>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain

Probab=99.93  E-value=4.6e-25  Score=161.19  Aligned_cols=90  Identities=17%  Similarity=0.293  Sum_probs=77.2

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCC------cEEEecCCCC-----CccceEEECCCeEEEeecchhhhcCCCcEEE
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRP------YVFIFRDEKD-----PVERALVNLATAQVEYSEDQQAMVRVPFSFS  113 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~------~L~yYk~~~d-----~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~  113 (171)
                      +|+|+|||.|+    ++|+||||||++.      .|.||+++++     ..|.|+|+|.+|........   ..++|+|+
T Consensus         1 ~v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d---~k~~~~f~   73 (101)
T cd01257           1 DVRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRAD---AKHRHLIA   73 (101)
T ss_pred             CccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccc---cccCeEEE
Confidence            47899999997    8999999999987      7999999975     67999999999865432211   24579999


Q ss_pred             EEeCCceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         114 VVTKHGGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       114 I~t~~rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                      |.|++++|+|+|+|++||++||++|.++
T Consensus        74 i~t~dr~f~l~aese~E~~~Wi~~i~~~  101 (101)
T cd01257          74 LYTRDEYFAVAAENEAEQDSWYQALLEL  101 (101)
T ss_pred             EEeCCceEEEEeCCHHHHHHHHHHHhhC
Confidence            9999999999999999999999999763

Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.

>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain

Probab=99.92  E-value=5.9e-25  Score=157.50  Aligned_cols=87  Identities=15%  Similarity=0.290  Sum_probs=77.0

Q ss_pred             EEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC--CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ceEEEE
Q psy7933          48 RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD--PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GGYLMQ  124 (171)
Q Consensus        48 k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d--~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt~~f~  124 (171)
                      .+|||.|+++..++|++|||||+++.|+||+++.+  ..++|.|+|..+.|...+      .+++.|+|.+.. ++|+|.
T Consensus         1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~~~~~~G~I~L~~~~i~~~~------~~~~~F~i~~~~~r~~~L~   74 (91)
T cd01247           1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEKSHGCRGSIFLKKAIIAAHE------FDENRFDISVNENVVWYLR   74 (91)
T ss_pred             CceEEEEeccccCCCceEEEEEECCEEEEEecCccCcCCCcEEEECcccEEEcCC------CCCCEEEEEeCCCeEEEEE
Confidence            37999999999999999999999999999999877  347999999999876532      246899997766 999999


Q ss_pred             eCCHHHHHHHHHHHHH
Q psy7933         125 TAGAREVHEWLYAINP  140 (171)
Q Consensus       125 A~s~~E~~~WI~aI~~  140 (171)
                      |+|++||++||+||+.
T Consensus        75 A~s~~e~~~Wi~al~~   90 (91)
T cd01247          75 AENSQSRLLWMDSVVR   90 (91)
T ss_pred             eCCHHHHHHHHHHHhh
Confidence            9999999999999985

Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt

>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain

Probab=99.92  E-value=1.9e-24  Score=155.18  Aligned_cols=95  Identities=20%  Similarity=0.322  Sum_probs=78.9

Q ss_pred             EEeEEEeeeCCCCCceEEEEEEeC--CcEEEecCCCCCccceEEECCCeEEEeecchh----hhcCCCcEEEEEeCCceE
Q psy7933          48 RKGYLNILEQKTNGWKKRWVAVRR--PYVFIFRDEKDPVERALVNLATAQVEYSEDQQ----AMVRVPFSFSVVTKHGGY  121 (171)
Q Consensus        48 k~GwL~K~g~~~~~WkrRWFVL~~--~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~----~~~~r~~~F~I~t~~rt~  121 (171)
                      ++|||.|+|+..+.|++|||||.+  ..|+||+++.+..++|.|+|..+.........    ....+.++|.|.|++|+|
T Consensus         1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~~r~~   80 (101)
T cd01235           1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFEDTAEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTSKRTY   80 (101)
T ss_pred             CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCCCCccceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeCCceE
Confidence            489999999999999999999994  48999999999999999999987543321100    001356789999999999


Q ss_pred             EEEeCCHHHHHHHHHHHHHHh
Q psy7933         122 LMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      +|.|++++|+++||+||+.++
T Consensus        81 ~~~a~s~~e~~~Wi~ai~~~i  101 (101)
T cd01235          81 NFLAENINEAQRWKEKIQQCI  101 (101)
T ss_pred             EEECCCHHHHHHHHHHHHhhC
Confidence            999999999999999999864

Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .

>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain

Probab=99.92  E-value=3.8e-24  Score=160.61  Aligned_cols=93  Identities=24%  Similarity=0.546  Sum_probs=83.2

Q ss_pred             eEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC--------
Q psy7933          47 SRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH--------  118 (171)
Q Consensus        47 ~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~--------  118 (171)
                      .|+|||.|+++..+.|++|||||.++.|+||+++++..+.|.|+|.++.|...++.    .++++|+|.+++        
T Consensus         1 ~k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~~~~~~g~I~L~~~~v~~~~~~----~~~~~F~i~~~~~~~~i~~~   76 (125)
T cd01252           1 DREGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENVSIREVEDP----SKPFCFELFSPSDKQQIKAC   76 (125)
T ss_pred             CcEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCCCCCceEEEECCCcEEEEcccC----CCCeeEEEECCccccccccc
Confidence            37899999999999999999999999999999999999999999999888765432    478999998755        


Q ss_pred             -------------ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         119 -------------GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       119 -------------rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                                   ++|+|+|+|++|+++||+||+.++.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~  114 (125)
T cd01252          77 KTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASIS  114 (125)
T ss_pred             cccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence                         5799999999999999999999875

Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain

Probab=99.91  E-value=9e-24  Score=155.10  Aligned_cols=94  Identities=12%  Similarity=0.205  Sum_probs=76.9

Q ss_pred             EEeEEEeeeCCC----CCceEEEEEEeCCc-------EEEecCCCCCccceEEECCCeEEEeecch--hhhcCCCcEEEE
Q psy7933          48 RKGYLNILEQKT----NGWKKRWVAVRRPY-------VFIFRDEKDPVERALVNLATAQVEYSEDQ--QAMVRVPFSFSV  114 (171)
Q Consensus        48 k~GwL~K~g~~~----~~WkrRWFVL~~~~-------L~yYk~~~d~~~~g~I~L~~~~V~~~~~~--~~~~~r~~~F~I  114 (171)
                      .+|||.|+++..    ++||||||||++..       |+||+++.+.++.|.|+|..+.+......  .......+.|.|
T Consensus         1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f~i   80 (108)
T cd01266           1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRKFKLEFVIDLESCSQVDPGLLCTAGNCIFGYGFDI   80 (108)
T ss_pred             CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCCCCccceEEECCccEEEcccccccccCcccceEEEE
Confidence            479999999854    39999999999876       59999999999999999999765432100  101134578999


Q ss_pred             EeCCceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         115 VTKHGGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       115 ~t~~rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                      .|+.|+|+|+|+|++||++||++|+++
T Consensus        81 ~t~~r~y~l~A~s~ee~~~Wi~~I~~~  107 (108)
T cd01266          81 ETIVRDLYLVAKNEEEMTLWVNCICKL  107 (108)
T ss_pred             EeCCccEEEEECCHHHHHHHHHHHHhh
Confidence            999999999999999999999999875

Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str

>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain

Probab=99.91  E-value=9.7e-24  Score=154.94  Aligned_cols=91  Identities=14%  Similarity=0.313  Sum_probs=74.1

Q ss_pred             EEeEEEeeeCC---------CCCceEEEEEEeC-CcEEEecCC-CCCccceEEECCCeEEEeecchhhhcCCCcEEEEEe
Q psy7933          48 RKGYLNILEQK---------TNGWKKRWVAVRR-PYVFIFRDE-KDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVT  116 (171)
Q Consensus        48 k~GwL~K~g~~---------~~~WkrRWFVL~~-~~L~yYk~~-~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t  116 (171)
                      ++|||.|.++.         .++||||||||++ ..|+||++. .+..+.|.|+|..|..+...+.  ..+++++|.|.|
T Consensus         1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~~~~p~G~IdL~~~~~V~~~~~--~~~~~~~f~I~t   78 (104)
T cd01236           1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMPTTLPQGTIDMNQCTDVVDAEA--RTGQKFSICILT   78 (104)
T ss_pred             CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCCCcccceEEEccceEEEeeccc--ccCCccEEEEEC
Confidence            57999999864         3599999999985 567777655 4678999999998865443321  235679999999


Q ss_pred             CCceEEEEeCCHHHHHHHHHHHHH
Q psy7933         117 KHGGYLMQTAGAREVHEWLYAINP  140 (171)
Q Consensus       117 ~~rt~~f~A~s~~E~~~WI~aI~~  140 (171)
                      ++|+|+|.|+|++||++||++|..
T Consensus        79 p~R~f~l~Aete~E~~~Wi~~l~~  102 (104)
T cd01236          79 PDKEHFIKAETKEEISWWLNMLMV  102 (104)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHh
Confidence            999999999999999999999974

Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain

Probab=99.90  E-value=2e-23  Score=151.79  Aligned_cols=90  Identities=20%  Similarity=0.304  Sum_probs=79.8

Q ss_pred             EEeEEEeeeCC-CCCceEEEEEEeC----CcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCc--e
Q psy7933          48 RKGYLNILEQK-TNGWKKRWVAVRR----PYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHG--G  120 (171)
Q Consensus        48 k~GwL~K~g~~-~~~WkrRWFVL~~----~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~r--t  120 (171)
                      +.|||.|+|+. .+.||+|||+|.+    +.|+||++..+.+++|.|+|.++.|....+  ...+|||||+|.++.+  +
T Consensus         1 ~~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p~gli~l~~~~V~~v~d--s~~~r~~cFel~~~~~~~~   78 (98)
T cd01245           1 KKGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKPIGLIDLSDAYLYPVHD--SLFGRPNCFQIVERALPTV   78 (98)
T ss_pred             CCCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCccceeeccccEEEEccc--cccCCCeEEEEecCCCCeE
Confidence            46999999987 8899999999986    899999999999999999999997765443  2457899999999976  7


Q ss_pred             EEEEeCCHHHHHHHHHHHHH
Q psy7933         121 YLMQTAGAREVHEWLYAINP  140 (171)
Q Consensus       121 ~~f~A~s~~E~~~WI~aI~~  140 (171)
                      |+++|++ +|+++||++|+.
T Consensus        79 y~~~a~~-~er~~Wi~~l~~   97 (98)
T cd01245          79 YYSCRSS-EERDKWIESLQA   97 (98)
T ss_pred             EEEeCCH-HHHHHHHHHHhc
Confidence            9999999 999999999975

RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain

Probab=99.89  E-value=1.5e-22  Score=141.54  Aligned_cols=87  Identities=17%  Similarity=0.355  Sum_probs=78.7

Q ss_pred             EEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC--ccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ceEEEE
Q psy7933          48 RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP--VERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GGYLMQ  124 (171)
Q Consensus        48 k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~--~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt~~f~  124 (171)
                      ++|||.|+++..+.|++|||||+++.|+||+++.+.  .+.+.|+|..+.+..++      .++++|.|.+++ ++|+|+
T Consensus         1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~~~~~~~~~i~l~~~~~~~~~------~~~~~F~i~~~~~~~~~~~   74 (91)
T cd01246           1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSSMRGKPRGTILLSGAVISEDD------SDDKCFTIDTGGDKTLHLR   74 (91)
T ss_pred             CeEEEEEecccCCCceeeEEEEECCEEEEEecCccCCCCceEEEEeceEEEEECC------CCCcEEEEEcCCCCEEEEE
Confidence            489999999888999999999999999999999887  89999999998776532      247999999987 999999


Q ss_pred             eCCHHHHHHHHHHHHH
Q psy7933         125 TAGAREVHEWLYAINP  140 (171)
Q Consensus       125 A~s~~E~~~WI~aI~~  140 (171)
                      |+|.+|+++||.||+.
T Consensus        75 a~s~~e~~~Wi~al~~   90 (91)
T cd01246          75 ANSEEERQRWVDALEL   90 (91)
T ss_pred             CCCHHHHHHHHHHHHh
Confidence            9999999999999985

Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain

Probab=99.89  E-value=1.6e-22  Score=142.25  Aligned_cols=90  Identities=24%  Similarity=0.456  Sum_probs=78.8

Q ss_pred             EEeEEEeeeCC-CCCceEEEEEEeCCcEEEecCCCC--CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEE
Q psy7933          48 RKGYLNILEQK-TNGWKKRWVAVRRPYVFIFRDEKD--PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQ  124 (171)
Q Consensus        48 k~GwL~K~g~~-~~~WkrRWFVL~~~~L~yYk~~~d--~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~  124 (171)
                      |+|||.|+++. .+.|++|||||+++.|+||+++.+  ..+.+.|+|..+.|...++.   ..++++|.|.+++++|+|+
T Consensus         1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~~~~~~~~i~l~~~~v~~~~~~---~~~~~~f~i~~~~~~~~f~   77 (94)
T cd01250           1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDYDNAHVKEIDLRRCTVRHNGKQ---PDRRFCFEVISPTKTWHFQ   77 (94)
T ss_pred             CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCcccccccceEEeccceEEecCccc---cCCceEEEEEcCCcEEEEE
Confidence            68999999876 679999999999999999999876  56788999998887665432   1378999999999999999


Q ss_pred             eCCHHHHHHHHHHHHH
Q psy7933         125 TAGAREVHEWLYAINP  140 (171)
Q Consensus       125 A~s~~E~~~WI~aI~~  140 (171)
                      |+|.+|+++||.||+.
T Consensus        78 a~s~~~~~~Wi~al~~   93 (94)
T cd01250          78 ADSEEERDDWISAIQE   93 (94)
T ss_pred             CCCHHHHHHHHHHHhc
Confidence            9999999999999975

Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01241 PH_Akt Akt pleckstrin homology (PH) domain

Probab=99.87  E-value=8e-22  Score=143.68  Aligned_cols=95  Identities=16%  Similarity=0.305  Sum_probs=72.0

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEe-CCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEE------eCC
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVR-RPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVV------TKH  118 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~-~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~------t~~  118 (171)
                      ++|+|||.|+|+..+.|++|||||+ ++.|+||+++.+....+.|+|.++.|..+........++++|.|.      +..
T Consensus         1 v~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~~~~~   80 (102)
T cd01241           1 VVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPEDGDPFLPPLNNFSVAECQLMKTERPRPNTFIIRCLQWTTVIE   80 (102)
T ss_pred             CcEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCCccCccccccCCeEEeeeeeeeccCCCcceEEEEeccCCcccC
Confidence            5799999999999999999999999 678888887655455678888877653321110012467899997      234


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      |+|  .|+|++||++||+||+.++
T Consensus        81 r~f--~a~s~ee~~eWi~ai~~v~  102 (102)
T cd01241          81 RTF--HVESPEEREEWIHAIQTVA  102 (102)
T ss_pred             EEE--EeCCHHHHHHHHHHHHhhC
Confidence            544  6999999999999998763

Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]

Probab=99.87  E-value=5.7e-21  Score=133.70  Aligned_cols=97  Identities=22%  Similarity=0.471  Sum_probs=85.4

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCC---CCccceEEECCCeEEEeecchh--hhcCCCcEEEEEeCCc-
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEK---DPVERALVNLATAQVEYSEDQQ--AMVRVPFSFSVVTKHG-  119 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~---d~~~~g~I~L~~~~V~~~~~~~--~~~~r~~~F~I~t~~r-  119 (171)
                      ++++|||.+++...+.|++|||||.++.|+||+++.   +..+.+.|+|.++.|....+..  .....+++|.|.++.+ 
T Consensus         1 ~~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~   80 (104)
T PF00169_consen    1 CIKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGK   80 (104)
T ss_dssp             EEEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSE
T ss_pred             CEEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCccccceeeeEEEEecCceEEEcCccccccccCCCcEEEEEeCCCc
Confidence            579999999998888999999999999999999998   5789999999999887765431  1135789999999986 


Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         120 GYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      +|+|+|+|++|+++||++|+.++
T Consensus        81 ~~~~~~~s~~~~~~W~~~i~~~~  103 (104)
T PF00169_consen   81 SYLFSAESEEERKRWIQAIQKAI  103 (104)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHHHh
Confidence            99999999999999999999875

The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....

>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain

Probab=99.86  E-value=2.8e-21  Score=140.47  Aligned_cols=80  Identities=18%  Similarity=0.196  Sum_probs=68.0

Q ss_pred             CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEEeCCHHHHHHHHHHHH
Q psy7933          60 NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN  139 (171)
Q Consensus        60 ~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~A~s~~E~~~WI~aI~  139 (171)
                      .+||+|||||.+..|+||+++.+ .+.|.|+|..+..+...+.. ..+++|+|+|+|++++|+|+|+|++|+++||.||+
T Consensus        19 ~n~KkRwF~Lt~~~L~Y~k~~~~-~~~g~I~L~~i~~ve~v~~~-~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi~al~   96 (98)
T cd01244          19 LHFKKRYFQLTTTHLSWAKDVQC-KKSALIKLAAIKGTEPLSDK-SFVNVDIITIVCEDDTMQLQFEAPVEATDWLNALE   96 (98)
T ss_pred             cCCceeEEEECCCEEEEECCCCC-ceeeeEEccceEEEEEcCCc-ccCCCceEEEEeCCCeEEEECCCHHHHHHHHHHHh
Confidence            39999999999999999998874 89999999988654332222 23567999999999999999999999999999998


Q ss_pred             HH
Q psy7933         140 PL  141 (171)
Q Consensus       140 ~~  141 (171)
                      .+
T Consensus        97 k~   98 (98)
T cd01244          97 KQ   98 (98)
T ss_pred             cC
Confidence            63

RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG0930|consensus

Probab=99.84  E-value=4.2e-21  Score=161.34  Aligned_cols=108  Identities=21%  Similarity=0.437  Sum_probs=90.3

Q ss_pred             ceeEEeEEEeeeC-CCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC------
Q psy7933          45 VVSRKGYLNILEQ-KTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK------  117 (171)
Q Consensus        45 ~v~k~GwL~K~g~-~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~------  117 (171)
                      ++.++|||.|+|+ ..++||||||+|.+++||||.--.|.+|+|.|+|.++.|...++.    ++||||+|+.+      
T Consensus       259 npdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tTDKEPrGIIpLeNlsir~VedP----~kP~cfEly~ps~~gq~  334 (395)
T KOG0930|consen  259 NPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDP----KKPNCFELYIPSNKGQV  334 (395)
T ss_pred             CccccceeeeecCCcccchhheeEEeecceeeeeeeccCCCCCcceeccccceeeccCC----CCCCeEEEecCCCCcCe
Confidence            5669999999998 667999999999999999999999999999999999988766653    69999998632      


Q ss_pred             ----------------CceEEEEeCCHHHHHHHHHHHHHHhhhhh-hcccccCCCC
Q psy7933         118 ----------------HGGYLMQTAGAREVHEWLYAINPLLAGQI-RSKTSRRQPP  156 (171)
Q Consensus       118 ----------------~rt~~f~A~s~~E~~~WI~aI~~~~~~~~-~~~~~~r~~~  156 (171)
                                      +..|.++|.+.+||++||++|+..++... ...+.+|+..
T Consensus       335 IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is~~Pfy~mla~rK~~  390 (395)
T KOG0930|consen  335 IKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAISRDPFYEMLAARKKK  390 (395)
T ss_pred             eeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhccCcHHHHHhccccc
Confidence                            23699999999999999999999887443 3445555443

>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain

Probab=99.79  E-value=1.5e-18  Score=126.22  Aligned_cols=94  Identities=19%  Similarity=0.285  Sum_probs=80.8

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCC-----CCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCce
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEK-----DPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGG  120 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~-----d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt  120 (171)
                      .+|+|||.|.+...+.|+.|||+|-++.|.|++...     ....++.|+|.++.|....+    ...+|+|.|.+.+++
T Consensus         2 ~ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~v~~~~~----~~~~~~F~I~~~~rs   77 (101)
T cd01219           2 LLKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGMQVCEGDN----LERPHSFLVSGKQRC   77 (101)
T ss_pred             cccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccEEEEeCCC----CCcCceEEEecCCcE
Confidence            469999999999999999999999999999998532     23567889999998875432    246899999999999


Q ss_pred             EEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         121 YLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       121 ~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|+|+|++|+++||.||+.++.
T Consensus        78 f~l~A~s~eEk~~W~~ai~~~i~  100 (101)
T cd01219          78 LELQARTQKEKNDWVQAIFSIID  100 (101)
T ss_pred             EEEEcCCHHHHHHHHHHHHHHhh
Confidence            99999999999999999999874

FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain

Probab=99.77  E-value=2.6e-18  Score=129.46  Aligned_cols=94  Identities=18%  Similarity=0.379  Sum_probs=73.2

Q ss_pred             eEEeEEEeee--CCCCCceEEEEEEeCCcEEEecCCCC---CccceEEECCCeEEEeecc-hhhhcCCCcEEEEEeC--C
Q psy7933          47 SRKGYLNILE--QKTNGWKKRWVAVRRPYVFIFRDEKD---PVERALVNLATAQVEYSED-QQAMVRVPFSFSVVTK--H  118 (171)
Q Consensus        47 ~k~GwL~K~g--~~~~~WkrRWFVL~~~~L~yYk~~~d---~~~~g~I~L~~~~V~~~~~-~~~~~~r~~~F~I~t~--~  118 (171)
                      .-.|||.-..  +..++|+||||||++..|+||+.+.+   ..|.|.|+|.+|.+...+. .+....|+|.|.|.+.  .
T Consensus         2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~~   81 (122)
T cd01263           2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDDEKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRPK   81 (122)
T ss_pred             ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCccccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEeccc
Confidence            4579998533  45569999999999999999997776   5789999999987655421 1123468999999541  1


Q ss_pred             -----------------ce-EEEEeCCHHHHHHHHHHHHH
Q psy7933         119 -----------------GG-YLMQTAGAREVHEWLYAINP  140 (171)
Q Consensus       119 -----------------rt-~~f~A~s~~E~~~WI~aI~~  140 (171)
                                       ++ |+|+||+.+||++||.||+.
T Consensus        82 ~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~  121 (122)
T cd01263          82 METDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNS  121 (122)
T ss_pred             ccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhc
Confidence                             33 68999999999999999986

Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain

Probab=99.76  E-value=7.2e-18  Score=122.16  Aligned_cols=89  Identities=20%  Similarity=0.360  Sum_probs=68.9

Q ss_pred             EeEEEeeeC--------CCCCceEEEEEEeCCcEEEecCCCCC--ccce--EEECCCeEEEeecchhhhcCCCcEEEEEe
Q psy7933          49 KGYLNILEQ--------KTNGWKKRWVAVRRPYVFIFRDEKDP--VERA--LVNLATAQVEYSEDQQAMVRVPFSFSVVT  116 (171)
Q Consensus        49 ~GwL~K~g~--------~~~~WkrRWFVL~~~~L~yYk~~~d~--~~~g--~I~L~~~~V~~~~~~~~~~~r~~~F~I~t  116 (171)
                      +|+|..+-.        ..+.|++|||||++..|+||+++...  ...+  .|+|.++.|...++.   .+++++|.|.+
T Consensus         2 ~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~~~~~~~~~~i~l~~~~i~~~~~~---~k~~~~F~l~~   78 (104)
T cd01253           2 EGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMAAENVHGEPPVDLTGAQCEVASDY---TKKKHVFRLRL   78 (104)
T ss_pred             CceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcccccCCCCCCcEeccCCEEEecCCc---ccCceEEEEEe
Confidence            577763321        23499999999999999999988653  2233  678888777665432   25789999976


Q ss_pred             C-CceEEEEeCCHHHHHHHHHHHHH
Q psy7933         117 K-HGGYLMQTAGAREVHEWLYAINP  140 (171)
Q Consensus       117 ~-~rt~~f~A~s~~E~~~WI~aI~~  140 (171)
                      + .++|+|+|++++||++||.+|+.
T Consensus        79 ~~~~~~~f~a~s~e~~~~Wi~aL~~  103 (104)
T cd01253          79 PDGAEFLFQAPDEEEMSSWVRALKS  103 (104)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHhc
Confidence            5 48899999999999999999974

Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain

Probab=99.75  E-value=6.8e-18  Score=126.64  Aligned_cols=94  Identities=13%  Similarity=0.379  Sum_probs=76.4

Q ss_pred             EEeEEEeeeCCCC------------------CceEEEEEEeCCcEEEecCCCCCccceEEECC-CeEEEeecch------
Q psy7933          48 RKGYLNILEQKTN------------------GWKKRWVAVRRPYVFIFRDEKDPVERALVNLA-TAQVEYSEDQ------  102 (171)
Q Consensus        48 k~GwL~K~g~~~~------------------~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~-~~~V~~~~~~------  102 (171)
                      |+|||.|+++...                  +|++|||||++.+|.||+++.+..++|.|.+. +..|......      
T Consensus         1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~~~~~~~vil~D~~f~v~~~~~~~~~~~~   80 (121)
T cd01254           1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPSSAQILDVILFDVDFKVNGGGKEDISLAV   80 (121)
T ss_pred             CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCCCCceeeEEEEcCCccEEeCCcccccccc
Confidence            6899999875421                  69999999999999999999999999999885 4455443221      


Q ss_pred             --hhhcCCCcEEEEEeCCceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         103 --QAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       103 --~~~~~r~~~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                        ....++.+.|.|.|++|+|.|.|+|+.++.+||++|+.+
T Consensus        81 ~~~~~~~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a  121 (121)
T cd01254          81 ELKDITGLRHGLKITNSNRSLKLKCKSSRKLKQWMASIEDA  121 (121)
T ss_pred             cccccCCCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence              001256799999999999999999999999999999863

Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF15409 PH_8: Pleckstrin homology domain

Probab=99.75  E-value=1.5e-17  Score=118.81  Aligned_cols=85  Identities=13%  Similarity=0.342  Sum_probs=75.0

Q ss_pred             eEEEeeeC-CCCCceEEEEEE--eCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEEeC
Q psy7933          50 GYLNILEQ-KTNGWKKRWVAV--RRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTA  126 (171)
Q Consensus        50 GwL~K~g~-~~~~WkrRWFVL--~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~A~  126 (171)
                      |||.|+.. ..++|+||||||  ..+.|.||+++++...+|.|+|..+.|....       +...|.|.+++..|+|.|.
T Consensus         1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~~~rGsi~v~~a~is~~~-------~~~~I~idsg~~i~hLKa~   73 (89)
T PF15409_consen    1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNSGKLRGSIDVSLAVISANK-------KSRRIDIDSGDEIWHLKAK   73 (89)
T ss_pred             CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCCCeeEeEEEccceEEEecC-------CCCEEEEEcCCeEEEEEcC
Confidence            89988865 556999999999  8899999999998889999999998776532       3578999999999999999


Q ss_pred             CHHHHHHHHHHHHHH
Q psy7933         127 GAREVHEWLYAINPL  141 (171)
Q Consensus       127 s~~E~~~WI~aI~~~  141 (171)
                      |++|.+.||.||+.+
T Consensus        74 s~~~f~~Wv~aL~~a   88 (89)
T PF15409_consen   74 SQEDFQRWVSALQKA   88 (89)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            999999999999874

>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C

Probab=99.72  E-value=8.8e-17  Score=119.11  Aligned_cols=94  Identities=19%  Similarity=0.412  Sum_probs=56.6

Q ss_pred             EEeEEEeeeCC-CCCceEEEEEEe-CCcEEEecCCCCCc-------------cceEEECC--CeEEEeecchhhh-cCCC
Q psy7933          48 RKGYLNILEQK-TNGWKKRWVAVR-RPYVFIFRDEKDPV-------------ERALVNLA--TAQVEYSEDQQAM-VRVP  109 (171)
Q Consensus        48 k~GwL~K~g~~-~~~WkrRWFVL~-~~~L~yYk~~~d~~-------------~~g~I~L~--~~~V~~~~~~~~~-~~r~  109 (171)
                      |+|||.|+++. ++.||+|||||+ ++.|.|||.+.+..             ..+.+...  ...+....+.... ..-.
T Consensus         1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (112)
T PF15413_consen    1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIHL   80 (112)
T ss_dssp             EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-SS
T ss_pred             CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcCC
Confidence            68999999998 889999999999 99999999943321             12222211  1111110000000 0124


Q ss_pred             cEEEEEeCCceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         110 FSFSVVTKHGGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       110 ~~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                      .+|.|.|++++|+|.|++.+|+.+||+||+++
T Consensus        81 ~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~  112 (112)
T PF15413_consen   81 KVFSIFTPTKTFHLRCETREDRYDWIEALQEA  112 (112)
T ss_dssp             EEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred             CCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence            68899999999999999999999999999863

>smart00233 PH Pleckstrin homology domain

Probab=99.72  E-value=1.7e-16  Score=108.85  Aligned_cols=95  Identities=23%  Similarity=0.468  Sum_probs=80.6

Q ss_pred             eEEeEEEeeeC-CCCCceEEEEEEeCCcEEEecCCCC---CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCc-eE
Q psy7933          47 SRKGYLNILEQ-KTNGWKKRWVAVRRPYVFIFRDEKD---PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHG-GY  121 (171)
Q Consensus        47 ~k~GwL~K~g~-~~~~WkrRWFVL~~~~L~yYk~~~d---~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~r-t~  121 (171)
                      +++|||.++.. ....|++|||+|.++.|.||+++.+   ..+.+.|+|.++.|....+.. ....+++|.|.++++ .|
T Consensus         2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~-~~~~~~~f~l~~~~~~~~   80 (102)
T smart00233        2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSGITVREAPDPD-SAKKPHCFEIKTADRRSY   80 (102)
T ss_pred             ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCcCEEEeCCCCc-cCCCceEEEEEecCCceE
Confidence            58999999987 5679999999999999999998866   467899999998776544321 123679999999887 99


Q ss_pred             EEEeCCHHHHHHHHHHHHHHh
Q psy7933         122 LMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      +|+|+|.+|+++|+.+|+.++
T Consensus        81 ~f~~~s~~~~~~W~~~i~~~~  101 (102)
T smart00233       81 LLQAESEEEREEWVDALRKAI  101 (102)
T ss_pred             EEEcCCHHHHHHHHHHHHHhh
Confidence            999999999999999999865

Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.

>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain

Probab=99.70  E-value=3.8e-16  Score=113.61  Aligned_cols=94  Identities=18%  Similarity=0.242  Sum_probs=73.6

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC---ccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEE
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP---VERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYL  122 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~---~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~  122 (171)
                      .+++|+|.|..++ ..|+|+||.+.+-.||+.+...+.   ...+.|+|.++.|+..++.   .+.+|+|.|.++.++|.
T Consensus         2 ~ikEG~L~K~~~k-~~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~~~V~~~~~~---~~~~~~F~I~~~~ks~~   77 (99)
T cd01220           2 FIRQGCLLKLSKK-GLQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRGMLTEESEHE---WGVPHCFTIFGGQCAIT   77 (99)
T ss_pred             eeeEEEEEEEeCC-CCceEEEEEccceEEEEEeecCCCceEEEEEEEEcCceEEeeccCC---cCCceeEEEEcCCeEEE
Confidence            4799999999864 477766666666555544444332   5789999999998765542   24689999999999999


Q ss_pred             EEeCCHHHHHHHHHHHHHHhh
Q psy7933         123 MQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|+|++|+++||++|+.++.
T Consensus        78 l~A~s~~Ek~~Wi~~i~~aI~   98 (99)
T cd01220          78 VAASTRAEKEKWLADLSKAIA   98 (99)
T ss_pred             EECCCHHHHHHHHHHHHHHhh
Confidence            999999999999999999874

Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain

Probab=99.70  E-value=2.8e-16  Score=117.60  Aligned_cols=93  Identities=23%  Similarity=0.383  Sum_probs=74.1

Q ss_pred             EEeEEEeee-----C-C----CCCceEEEEEEeCCcEEEecCCCC-------CccceEEECCCeEEEeecchhhhcCCCc
Q psy7933          48 RKGYLNILE-----Q-K----TNGWKKRWVAVRRPYVFIFRDEKD-------PVERALVNLATAQVEYSEDQQAMVRVPF  110 (171)
Q Consensus        48 k~GwL~K~g-----~-~----~~~WkrRWFVL~~~~L~yYk~~~d-------~~~~g~I~L~~~~V~~~~~~~~~~~r~~  110 (171)
                      |+|+|..+-     + +    ...|+++|+||+++.|++||+++.       ......|.|..+......+-   .+|++
T Consensus         2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~~ia~dy---~Kr~~   78 (117)
T cd01230           2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHALATRASDY---SKKPH   78 (117)
T ss_pred             CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccceeEeeccc---cCCCc
Confidence            678887653     1 1    238999999999999999999964       34457788887654433332   37899


Q ss_pred             EEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         111 SFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       111 ~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +|.|.+++ +.|+|||.+.+||+.||.+|+.+.+
T Consensus        79 VF~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~  112 (117)
T cd01230          79 VFRLRTADWREFLFQTSSLKELQSWIERINVVAA  112 (117)
T ss_pred             EEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence            99999986 8899999999999999999999875

EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd00821 PH Pleckstrin homology (PH) domain

Probab=99.64  E-value=1.3e-15  Score=103.48  Aligned_cols=90  Identities=27%  Similarity=0.520  Sum_probs=77.6

Q ss_pred             EEeEEEeeeCCC-CCceEEEEEEeCCcEEEecCCCC---CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ceEE
Q psy7933          48 RKGYLNILEQKT-NGWKKRWVAVRRPYVFIFRDEKD---PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GGYL  122 (171)
Q Consensus        48 k~GwL~K~g~~~-~~WkrRWFVL~~~~L~yYk~~~d---~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt~~  122 (171)
                      ++|||.++.... ..|++|||+|.+..|++|+...+   ..+.+.|+|.++.|....+..   +.+++|.|.+.+ +.|+
T Consensus         1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~---~~~~~f~i~~~~~~~~~   77 (96)
T cd00821           1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSGAEVEESPDDS---GRKNCFEIRTPDGRSYL   77 (96)
T ss_pred             CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCCCEEEECCCcC---CCCcEEEEecCCCcEEE
Confidence            479999988766 79999999999999999998876   578999999998776654321   357999999987 9999


Q ss_pred             EEeCCHHHHHHHHHHHHH
Q psy7933         123 MQTAGAREVHEWLYAINP  140 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~  140 (171)
                      |+|+|++|+++|+.+|+.
T Consensus        78 ~~~~s~~~~~~W~~~l~~   95 (96)
T cd00821          78 LQAESEEEREEWIEALQS   95 (96)
T ss_pred             EEeCCHHHHHHHHHHHhc
Confidence            999999999999999985

Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain

Probab=99.63  E-value=1.3e-15  Score=111.98  Aligned_cols=82  Identities=13%  Similarity=0.306  Sum_probs=66.4

Q ss_pred             CCCceEEEEEEeCCcEEEecCCCCCc--cceEEECCCeEEEeecchhhhcCCCcEEEEEeCC----ceEEEEeCCHHHHH
Q psy7933          59 TNGWKKRWVAVRRPYVFIFRDEKDPV--ERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH----GGYLMQTAGAREVH  132 (171)
Q Consensus        59 ~~~WkrRWFVL~~~~L~yYk~~~d~~--~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~----rt~~f~A~s~~E~~  132 (171)
                      .++||||||+|++..|+|||+..+..  +.+.|+|.+|.|..+...   ..++|+|.+.++.    ++|+|.|+|++++.
T Consensus        17 ~K~~KrrwF~lk~~~L~YyK~kee~~~~p~i~lnl~gcev~~dv~~---~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya   93 (106)
T cd01237          17 LKGYKQYWFTFRDTSISYYKSKEDSNGAPIGQLNLKGCEVTPDVNV---AQQKFHIKLLIPTAEGMNEVWLRCDNEKQYA   93 (106)
T ss_pred             hhhheeEEEEEeCCEEEEEccchhcCCCCeEEEecCceEEcccccc---cccceEEEEecCCccCCeEEEEECCCHHHHH
Confidence            45899999999999999999887644  455566678877654432   2467999999876    99999999999999


Q ss_pred             HHHHHHHHHhh
Q psy7933         133 EWLYAINPLLA  143 (171)
Q Consensus       133 ~WI~aI~~~~~  143 (171)
                      +||.|+.-+..
T Consensus        94 ~Wmaa~rlas~  104 (106)
T cd01237          94 KWMAACRLASK  104 (106)
T ss_pred             HHHHHHHHhhC
Confidence            99999987654

Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd00900 PH-like Pleckstrin homology-like domain

Probab=99.61  E-value=1.1e-14  Score=99.73  Aligned_cols=90  Identities=24%  Similarity=0.509  Sum_probs=76.2

Q ss_pred             EEeEEEeeeCCC----CCceEEEEEEeCCcEEEecCCCCCccc-eEEECCCeEEEeecchhhhcCCCcEEEEEeC---Cc
Q psy7933          48 RKGYLNILEQKT----NGWKKRWVAVRRPYVFIFRDEKDPVER-ALVNLATAQVEYSEDQQAMVRVPFSFSVVTK---HG  119 (171)
Q Consensus        48 k~GwL~K~g~~~----~~WkrRWFVL~~~~L~yYk~~~d~~~~-g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~---~r  119 (171)
                      .+|||.+++...    ..|++|||+|.+..|+||+.+.+.... +.+++..+.|...++.   .+.+++|.|.+.   .+
T Consensus         1 ~~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~~~~~~~~~~l~~~~v~~~~~~---~~~~~~F~i~~~~~~~~   77 (99)
T cd00900           1 KEGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDKKEIKPGSIPLSEISVEEDPDG---SDDPNCFAIVTKDRGRR   77 (99)
T ss_pred             CccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCCCcCCCCEEEccceEEEECCCC---CCCCceEEEECCCCCcE
Confidence            369999988765    699999999999999999998876665 6899998886654332   146899999998   78


Q ss_pred             eEEEEeCCHHHHHHHHHHHHH
Q psy7933         120 GYLMQTAGAREVHEWLYAINP  140 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~  140 (171)
                      .|+|+|++.+|++.|+.+|+.
T Consensus        78 ~~~~~~~~~~~~~~W~~al~~   98 (99)
T cd00900          78 VFVFQADSEEEAQEWVEALQQ   98 (99)
T ss_pred             EEEEEcCCHHHHHHHHHHHhc
Confidence            899999999999999999986

Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.

>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A

Probab=99.60  E-value=1.8e-14  Score=107.65  Aligned_cols=92  Identities=24%  Similarity=0.438  Sum_probs=63.7

Q ss_pred             EEeEEEeee-----C-----CCCCceEEEEEEeCCcEEEecCCCC--------------CccceEEECCCeEEEeecchh
Q psy7933          48 RKGYLNILE-----Q-----KTNGWKKRWVAVRRPYVFIFRDEKD--------------PVERALVNLATAQVEYSEDQQ  103 (171)
Q Consensus        48 k~GwL~K~g-----~-----~~~~WkrRWFVL~~~~L~yYk~~~d--------------~~~~g~I~L~~~~V~~~~~~~  103 (171)
                      |+|||..+-     +     ....|+.-|+||++..|++|+++..              ..+.+.|+|..+......+  
T Consensus         2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~a~d--   79 (119)
T PF15410_consen    2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEIASD--   79 (119)
T ss_dssp             -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEEEETT--
T ss_pred             ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceEEEeCcc--
Confidence            789998753     1     1239999999999999999998421              1245669998877665443  


Q ss_pred             hhcCCCcEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         104 AMVRVPFSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       104 ~~~~r~~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                       ..+|+|+|.|.|.+ ..|+|||.|++||.+||++|+.+.
T Consensus        80 -Y~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~A  118 (119)
T PF15410_consen   80 -YTKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAA  118 (119)
T ss_dssp             -BTTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred             -cccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhc
Confidence             45799999999975 779999999999999999999865

>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain

Probab=99.59  E-value=1.5e-14  Score=104.83  Aligned_cols=93  Identities=17%  Similarity=0.300  Sum_probs=77.1

Q ss_pred             eeEEeEEEeeeCCC--CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC------
Q psy7933          46 VSRKGYLNILEQKT--NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK------  117 (171)
Q Consensus        46 v~k~GwL~K~g~~~--~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~------  117 (171)
                      +++.|||.-..-..  ..=|+|||||...+|+||++..|.++++.|+|.++.+...++  ....++|+|+|..+      
T Consensus         1 virkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~eeKE~kyilpLdnLk~Rdve~--gf~sk~~~FeLfnpd~rnvy   78 (110)
T cd01256           1 VIRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDEEKEKKYMLPLDGLKLRDIEG--GFMSRNHKFALFYPDGRNVY   78 (110)
T ss_pred             CeeeeeEEeeccceecCCCcceEEEEecceeeeecccccccccceeeccccEEEeecc--cccCCCcEEEEEcCcccccc
Confidence            57899998776543  368999999999999999999999999999999998866553  24578899999853      


Q ss_pred             --CceEEEEeCCHHHHHHHHHHHHH
Q psy7933         118 --HGGYLMQTAGAREVHEWLYAINP  140 (171)
Q Consensus       118 --~rt~~f~A~s~~E~~~WI~aI~~  140 (171)
                        .++.-|+|++++|++.|-..+-.
T Consensus        79 kd~k~lel~~~~~e~vdswkasflr  103 (110)
T cd01256          79 KDYKQLELGCETLEEVDSWKASFLR  103 (110)
T ss_pred             cchheeeecCCCHHHHHHHHHHHHh
Confidence              36678999999999999876543

Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain

Probab=99.43  E-value=1.6e-13  Score=100.28  Aligned_cols=95  Identities=20%  Similarity=0.354  Sum_probs=76.4

Q ss_pred             eEEeEEEeeeC-CCCCceEEEEEEeCCc-----EEEecCCCCCccceEEECCCeEEEeecchh-------hhcCCCcEEE
Q psy7933          47 SRKGYLNILEQ-KTNGWKKRWVAVRRPY-----VFIFRDEKDPVERALVNLATAQVEYSEDQQ-------AMVRVPFSFS  113 (171)
Q Consensus        47 ~k~GwL~K~g~-~~~~WkrRWFVL~~~~-----L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~-------~~~~r~~~F~  113 (171)
                      .++|||.|.|+ ..+.||||||||++-.     |.-|+..+ .+|.-.|.|.+.+|.+.+...       .+.+..+.|.
T Consensus         3 k~sGyL~k~Gg~~~KkWKKRwFvL~qvsQYtfamcsy~ekk-s~P~e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~ff~   81 (117)
T cd01234           3 KHCGYLYAIGKNVWKKWKKRFFVLVQVSQYTFAMCSYREKK-AEPTEFIQLDGYTVDYMPESDPDPNSELSLQGGRHFFN   81 (117)
T ss_pred             ceeEEEEeccchhhhhhheeEEEEEchhHHHHHHHhhhhhc-CCchhheeecceEEeccCCCCCCcccccccccchhhhh
Confidence            48999999998 7789999999999643     44555444 478889999999999875433       1225567888


Q ss_pred             EEeCCceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         114 VVTKHGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       114 I~t~~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      .+-.+.+..|+.+++.|++-||+|+=.+.
T Consensus        82 avkegd~~~fa~~de~~r~lwvqa~yrat  110 (117)
T cd01234          82 AVKEGDELKFATDDENERHLWVQAMYRAT  110 (117)
T ss_pred             eeccCcEEEEeccchHHHHHHHHHHHHHc
Confidence            88888999999999999999999997654

CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG1090|consensus

Probab=99.36  E-value=1.8e-13  Score=129.73  Aligned_cols=97  Identities=20%  Similarity=0.272  Sum_probs=81.2

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEe--CCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEE
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVR--RPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYL  122 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~--~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~  122 (171)
                      +.+-+|||.|+|...|.||.|||||.  .++|+||.+-.|.+++|.|+|..+.-...... ...+++-.|.+.|.+|+|-
T Consensus      1633 Nr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~edt~pkG~IdLaevesv~~~~~-k~vdekgffdlktt~rvyn 1711 (1732)
T KOG1090|consen 1633 NRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFEDTKPKGCIDLAEVESVALIGP-KTVDEKGFFDLKTTNRVYN 1711 (1732)
T ss_pred             ccCcccchhhcchhhcccccceeEecCCccceeeecccccccccchhhhhhhhhhcccCc-cccCccceeeeehhhHHHH
Confidence            44459999999999999999999997  47999999999999999999987643221110 1235678899999999999


Q ss_pred             EEeCCHHHHHHHHHHHHHHh
Q psy7933         123 MQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~  142 (171)
                      |+|.+..+..+||+-|+.++
T Consensus      1712 f~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1712 FCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred             HHhccchHHHHHHHHHHHhh
Confidence            99999999999999999875

>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain

Probab=99.35  E-value=2.4e-11  Score=89.28  Aligned_cols=96  Identities=20%  Similarity=0.190  Sum_probs=77.5

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecC---CCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceE
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRD---EKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGY  121 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~---~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~  121 (171)
                      ..+++|-|.|..  .+.-+.|+|.|-++.|.|-+-   .+...-.+.|+|.++.|+..++..   ..+|.|.|.++.++|
T Consensus         3 ~li~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~---~~~n~f~I~~~~kSf   77 (104)
T cd01218           3 VLVGEGVLTKMC--RKKPKQRQFFLFNDILVYGNIVISKKKYNKQHILPLEGVQVESIEDDG---IERNGWIIKTPTKSF   77 (104)
T ss_pred             EEEecCcEEEee--cCCCceEEEEEecCEEEEEEeecCCceeeEeeEEEccceEEEecCCcc---cccceEEEecCCeEE
Confidence            467899999987  567778999999998877532   112345678999999987665532   357999999999999


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      .++|+|.+|+.+|+++|+.++...
T Consensus        78 ~v~A~s~~eK~eWl~~i~~ai~~~  101 (104)
T cd01218          78 AVYAATETEKREWMLHINKCVTDL  101 (104)
T ss_pred             EEEcCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999988644

Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain

Probab=99.29  E-value=1.7e-11  Score=89.93  Aligned_cols=88  Identities=17%  Similarity=0.349  Sum_probs=63.0

Q ss_pred             EEeEEEeeeCCC--CCceEEEEEEeCC-cE----EEecC-CC----CCccceEEECCCeEEEeecchhhhcCCCcEEEEE
Q psy7933          48 RKGYLNILEQKT--NGWKKRWVAVRRP-YV----FIFRD-EK----DPVERALVNLATAQVEYSEDQQAMVRVPFSFSVV  115 (171)
Q Consensus        48 k~GwL~K~g~~~--~~WkrRWFVL~~~-~L----~yYk~-~~----d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~  115 (171)
                      |+|||+.+....  ..|.|.||..... .+    .++.. .+    .....-.|.|..|.+...++.    .|.|||+|.
T Consensus         1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~~r~~~~~----dRRFCFei~   76 (104)
T cd01249           1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCSRRKTESI----DKRFCFDVE   76 (104)
T ss_pred             CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeeccccccCCc----cceeeEeee
Confidence            689999987532  2899999888763 33    22222 11    112223467777877665543    488999999


Q ss_pred             eCCc--eEEEEeCCHHHHHHHHHHHH
Q psy7933         116 TKHG--GYLMQTAGAREVHEWLYAIN  139 (171)
Q Consensus       116 t~~r--t~~f~A~s~~E~~~WI~aI~  139 (171)
                      ++++  ++.|||+|++|+.+||.||+
T Consensus        77 ~~~~~~~~~lQA~Se~~~~~Wi~A~d  102 (104)
T cd01249          77 VEEKPGVITMQALSEKDRRLWIEAMD  102 (104)
T ss_pred             ecCCCCeEEEEecCHHHHHHHHHhhc
Confidence            8876  89999999999999999986

Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain

Probab=99.24  E-value=6.6e-11  Score=87.97  Aligned_cols=95  Identities=17%  Similarity=0.280  Sum_probs=76.4

Q ss_pred             eEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhh--hcCCCcEEEEEeCCceEEEE
Q psy7933          47 SRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQA--MVRVPFSFSVVTKHGGYLMQ  124 (171)
Q Consensus        47 ~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~--~~~r~~~F~I~t~~rt~~f~  124 (171)
                      +|+|||.--....+.|||+|++|....|.+|+++++.+....|+|..+..........  ....+|||+|.|.+.+|+..
T Consensus         1 lkEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~~skyyKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~~vY~VG   80 (117)
T cd01239           1 LKEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEESGSRYYKEIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTTNVYFVG   80 (117)
T ss_pred             CccceEEEEecCccceeeeEEEecCCeEEEEEcCCCCeeeEEeehHHheEEeccCCCcCCCCCCCcEEEEEecCEEEEec
Confidence            4899999888888999999999999999999999999999999999874332221110  02578999999999999997


Q ss_pred             eC--------------------CHHHHHHHHHHHHHH
Q psy7933         125 TA--------------------GAREVHEWLYAINPL  141 (171)
Q Consensus       125 A~--------------------s~~E~~~WI~aI~~~  141 (171)
                      ++                    ..+....|-.||+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA  117 (117)
T cd01239          81 GEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA  117 (117)
T ss_pred             ccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence            75                    334568899999863

Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG0690|consensus

Probab=99.22  E-value=9.1e-12  Score=108.08  Aligned_cols=104  Identities=16%  Similarity=0.226  Sum_probs=72.4

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEe-CCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC----C
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVR-RPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK----H  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~-~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~----~  118 (171)
                      ..++++|||+|+|...++|+.|||+|. ++.|.=|++.-.....-..+|.+..|..+.......-|||.|.|-+-    .
T Consensus        13 ~~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~m~~erPrPntFiiRcLQWTTV   92 (516)
T KOG0690|consen   13 EDVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQPTPEPLNNFMVRDCQTMKTERPRPNTFIIRCLQWTTV   92 (516)
T ss_pred             hhhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccCCCCcccccchhhhhhhhhhccCCCCceEEEEeeeeeee
Confidence            478899999999999999999999997 46788887543222222245655555432221111247999998642    2


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHhhhhhh
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLLAGQIR  147 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~~~~~~  147 (171)
                      -.-.|-+++.+++++|+.||+.+...-+.
T Consensus        93 IERTF~ves~~eRq~W~~AIq~vsn~l~q  121 (516)
T KOG0690|consen   93 IERTFYVESAEERQEWIEAIQAVSNRLKQ  121 (516)
T ss_pred             eeeeeecCCHHHHHHHHHHHHHHhhhhhh
Confidence            22456699999999999999998865443

>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A

Probab=99.20  E-value=3.8e-10  Score=82.94  Aligned_cols=91  Identities=18%  Similarity=0.250  Sum_probs=67.1

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCC-cEEEecCCCCCccceEEECCC-eEEEeecchhhhcCCCcEEEEEeCCce
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRP-YVFIFRDEKDPVERALVNLAT-AQVEYSEDQQAMVRVPFSFSVVTKHGG  120 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~-~L~yYk~~~d~~~~g~I~L~~-~~V~~~~~~~~~~~r~~~F~I~t~~rt  120 (171)
                      ...++++|++.|+.+..  .|+|||+|.+. .|+|++.... ..+|.|+++. ..++..        ....|.|.|++|+
T Consensus        10 ge~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~~-~~KGeI~~~~~l~v~~k--------~~~~F~I~tp~Rt   78 (104)
T PF14593_consen   10 GELILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKKM-VLKGEIPWSKELSVEVK--------SFKTFFIHTPKRT   78 (104)
T ss_dssp             T--EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTTT-EEEEEE--STT-EEEEC--------SSSEEEEEETTEE
T ss_pred             CCeEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCCC-eECcEEecCCceEEEEc--------cCCEEEEECCCcE
Confidence            34788999999998666  99999999986 7777776654 7889999984 455542        2358999999999


Q ss_pred             EEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         121 YLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       121 ~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      |+|... ..+...|+++|+.+...+
T Consensus        79 Y~l~d~-~~~A~~W~~~I~~~~~~~  102 (104)
T PF14593_consen   79 YYLEDP-EGNAQQWVEAIEEVKKQY  102 (104)
T ss_dssp             EEEE-T-TS-HHHHHHHHHHHHHHH
T ss_pred             EEEECC-CCCHHHHHHHHHHHHHHh
Confidence            999874 455788999999987643

>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain

Probab=99.11  E-value=1.3e-09  Score=81.17  Aligned_cols=95  Identities=12%  Similarity=0.195  Sum_probs=77.5

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC-----------CccceEEECCCeEEEeecchhhhcCCCcEEEE
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD-----------PVERALVNLATAQVEYSEDQQAMVRVPFSFSV  114 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d-----------~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I  114 (171)
                      .+++|-|.|-+...+..+.|+|.|-++.|.|-|....           ..-++.|+|..+.|.-.++.+   .-+|.|.|
T Consensus         4 lI~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d~~---~~knaF~I   80 (112)
T cd01261           4 FIMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDKPDSS---EYKNAFEI   80 (112)
T ss_pred             ccccCcEEEEecccCCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeeeeEEEEcCCCc---ccCceEEE
Confidence            4689999999877789999999999999988885332           223556899988887655543   34899999


Q ss_pred             EeC-CceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         115 VTK-HGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       115 ~t~-~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .+. .+.|.|+|.+.+|..+||++|..++.
T Consensus        81 ~~~~~~s~~l~Akt~eeK~~Wm~~l~~~~~  110 (112)
T cd01261          81 ILKDGNSVIFSAKNAEEKNNWMAALISVQT  110 (112)
T ss_pred             EcCCCCEEEEEECCHHHHHHHHHHHHHHhc
Confidence            985 68899999999999999999998763

Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG2059|consensus

Probab=99.05  E-value=3.8e-10  Score=104.50  Aligned_cols=98  Identities=20%  Similarity=0.303  Sum_probs=79.6

Q ss_pred             CCceeEEeEEEeeeCCCC-----CceEEEEEEeCCcEEEecCCCCCccceEEECCCeE-EEeecchhhhcCCCcEEEEEe
Q psy7933          43 SPVVSRKGYLNILEQKTN-----GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQ-VEYSEDQQAMVRVPFSFSVVT  116 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~-----~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~-V~~~~~~~~~~~r~~~F~I~t  116 (171)
                      .+.+.|.|.|.|+....+     ++|||||.|....|.|.|++.. .+.++|+|.++. |+..++.  ..+.+|+|.|++
T Consensus       562 ~p~v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~~-q~~~~Ipl~nI~avEklee~--sF~~knv~qVV~  638 (800)
T KOG2059|consen  562 EPVVLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPGK-QPIYTIPLSNIRAVEKLEEK--SFKMKNVFQVVH  638 (800)
T ss_pred             CCceecccceEeccccccchhhhhhhheEEEeccceeEEecCCcc-CcccceeHHHHHHHHHhhhh--ccCCCceEEEEe
Confidence            456777777777654332     7899999999999999999986 899999999884 3332322  246789999999


Q ss_pred             CCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         117 KHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       117 ~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .+|+.||||.+-.|.++|+.+|..+..
T Consensus       639 ~drtly~Q~~n~vEandWldaL~kvs~  665 (800)
T KOG2059|consen  639 TDRTLYVQAKNCVEANDWLDALRKVSC  665 (800)
T ss_pred             cCcceeEecCCchHHHHHHHHHHHHhc
Confidence            999999999999999999999998753

>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain

Probab=99.04  E-value=4.3e-09  Score=78.90  Aligned_cols=95  Identities=21%  Similarity=0.353  Sum_probs=69.4

Q ss_pred             eEEeEEEeeeC--CCCCceEEEEEEeCCcEEEecCCCCC------ccceEEECCC--eEEEeecchhhh-----cCCCcE
Q psy7933          47 SRKGYLNILEQ--KTNGWKKRWVAVRRPYVFIFRDEKDP------VERALVNLAT--AQVEYSEDQQAM-----VRVPFS  111 (171)
Q Consensus        47 ~k~GwL~K~g~--~~~~WkrRWFVL~~~~L~yYk~~~d~------~~~g~I~L~~--~~V~~~~~~~~~-----~~r~~~  111 (171)
                      ..+|||.-...  ..++|+|+|+||.+..|++|..+.+.      .+.-.|++++  +.|... .+.++     ...|+.
T Consensus         3 ~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV~~V-tasDvi~a~~kDiP~I   81 (122)
T cd01243           3 AYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSVSSV-LESDVIHASKKDIPCI   81 (122)
T ss_pred             cceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCCCCEEEEEe-cHHHccccCcccCCeE
Confidence            46899965443  34599999999999999999977753      2345678853  444321 11111     236999


Q ss_pred             EEEEe-------CCceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         112 FSVVT-------KHGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       112 F~I~t-------~~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      |.|.+       +..+.+|-|+|+.|.+.||.||+++.
T Consensus        82 f~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l~  119 (122)
T cd01243          82 FRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSELH  119 (122)
T ss_pred             EEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHHH
Confidence            99986       34779999999999999999999875

MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain

Probab=98.97  E-value=1.4e-08  Score=75.16  Aligned_cols=94  Identities=18%  Similarity=0.436  Sum_probs=69.0

Q ss_pred             EEeEEEeeeC-C---CCCceEEEEEEeCCcEEEecCCCCC---ccceEEECCCeEEEee-cchhh-----hcCCCcEEEE
Q psy7933          48 RKGYLNILEQ-K---TNGWKKRWVAVRRPYVFIFRDEKDP---VERALVNLATAQVEYS-EDQQA-----MVRVPFSFSV  114 (171)
Q Consensus        48 k~GwL~K~g~-~---~~~WkrRWFVL~~~~L~yYk~~~d~---~~~g~I~L~~~~V~~~-~~~~~-----~~~r~~~F~I  114 (171)
                      .+|||.-... .   .++|+|+|+||.+..|++|..+.+.   .+...|+|.. .+... ..+.+     -...|+.|.|
T Consensus         2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~~~~p~~vldl~~-~fhv~~V~asDVi~a~~kDiP~IF~I   80 (112)
T cd01242           2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKENSTPSMILDIDK-LFHVRPVTQGDVYRADAKEIPKIFQI   80 (112)
T ss_pred             cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCccccCCCcEEEEEccc-eeeeecccHHHeeecCcccCCeEEEE
Confidence            5899976554 2   2499999999999999999988763   3566777754 22211 11110     1236999999


Q ss_pred             EeCC--ceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         115 VTKH--GGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       115 ~t~~--rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      ....  ++.+|-|+++.|.+.||.+|...+
T Consensus        81 ~~~~~~~~lllLA~s~~ek~kWV~~L~~~~  110 (112)
T cd01242          81 LYANEARDLLLLAPQTDEQNKWVSRLVKKI  110 (112)
T ss_pred             EeCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence            8864  889999999999999999997654

Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain

Probab=98.95  E-value=4.6e-09  Score=77.86  Aligned_cols=98  Identities=19%  Similarity=0.261  Sum_probs=68.1

Q ss_pred             EEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccc---eEEECCCeEEEeecchhhhc--CCCcEEEEEeC-----
Q psy7933          48 RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVER---ALVNLATAQVEYSEDQQAMV--RVPFSFSVVTK-----  117 (171)
Q Consensus        48 k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~---g~I~L~~~~V~~~~~~~~~~--~r~~~F~I~t~-----  117 (171)
                      .+|+|+-+....++||||||||+...|||+-..+...++   ....+.+..|-..-.-....  --+|+|.|..+     
T Consensus         2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgksk~srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~~q~~   81 (114)
T cd01259           2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEKTKNTRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVGDQSK   81 (114)
T ss_pred             ccceEEEccCCCccceEEEEEEeCCeeEEccCCCcCCHHHHHHHHhcccCcEEEEechhhccCCCCCceEEEeccccCcc
Confidence            489999999999999999999999999988655544433   22344444432221111001  13688988643     


Q ss_pred             --CceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         118 --HGGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       118 --~rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                        ....+|+|++++.++-||.||+-+.-|.
T Consensus        82 ~s~~ik~lCaeDe~t~~~W~ta~Ri~KyG~  111 (114)
T cd01259          82 GSQSIKYLCAEDLPTLDRWLTAIRIAKYGK  111 (114)
T ss_pred             cchhheeeccCCHHHHHHHHHHHHHHhhhh
Confidence              1237999999999999999998766554

Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG0521|consensus

Probab=98.91  E-value=4.8e-10  Score=106.46  Aligned_cols=101  Identities=19%  Similarity=0.430  Sum_probs=84.2

Q ss_pred             CceeEEeEEEeeeCC-CCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEE
Q psy7933          44 PVVSRKGYLNILEQK-TNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYL  122 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~-~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~  122 (171)
                      ......|||.|+.+. .+.|+||||-+.++.+.|+..-.+......++|..|.|..++++.   .+.+||+|++++++|.
T Consensus       272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~~~~~~~~dL~~csvk~~~~~~---drr~CF~iiS~tks~~  348 (785)
T KOG0521|consen  272 LGYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGADAENVLIEDLRTCSVKPDAEQR---DRRFCFEIISPTKSYL  348 (785)
T ss_pred             chhhhhhhhhhhcccchhhHHhhhhhhhccccccccccccccccccccchhccccCCcccc---cceeeEEEecCCcceE
Confidence            456678899988765 569999999999999989887766444677789999887766542   3789999999999999


Q ss_pred             EEeCCHHHHHHHHHHHHHHhhhhhh
Q psy7933         123 MQTAGAREVHEWLYAINPLLAGQIR  147 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~~~~~~  147 (171)
                      |||+|+.+.++||.+|+..+.....
T Consensus       349 lQAes~~d~~~Wi~~i~nsi~s~l~  373 (785)
T KOG0521|consen  349 LQAESEKDCQDWISALQNSILSALN  373 (785)
T ss_pred             EecCchhHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999998875553

>KOG3640|consensus

Probab=98.87  E-value=4.1e-09  Score=100.08  Aligned_cols=101  Identities=20%  Similarity=0.421  Sum_probs=78.6

Q ss_pred             CCceeEEeEEEeeeC--CCCCceEEEEEEeCCcEEEecCCCCC---ccceEEECCCeEEEeecch-hhhcCCCcEEEEEe
Q psy7933          43 SPVVSRKGYLNILEQ--KTNGWKKRWVAVRRPYVFIFRDEKDP---VERALVNLATAQVEYSEDQ-QAMVRVPFSFSVVT  116 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~--~~~~WkrRWFVL~~~~L~yYk~~~d~---~~~g~I~L~~~~V~~~~~~-~~~~~r~~~F~I~t  116 (171)
                      +.+|.-.|+|.--..  ..+.|+|||++|.++.+.|+|.++|.   .+.|.|+|..|+-...+.. +..-.|+|.|.|.+
T Consensus       987 ~idVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDEkrK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~ 1066 (1116)
T KOG3640|consen  987 AIDVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDEKRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEV 1066 (1116)
T ss_pred             ccceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchhcccCcceeeehhhhhccccccchhhhccCCceeEEEe
Confidence            556778899876543  45599999999999999999977764   5789999999865433322 23457899999972


Q ss_pred             -------------CCc-eEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         117 -------------KHG-GYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       117 -------------~~r-t~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                                   ..| -..|.|++.+|++.|+.+|+.++.
T Consensus      1067 ~rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~ 1107 (1116)
T KOG3640|consen 1067 WRPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLK 1107 (1116)
T ss_pred             ecccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHH
Confidence                         123 468999999999999999999874

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.79  E-value=1.9e-08  Score=90.02  Aligned_cols=96  Identities=18%  Similarity=0.235  Sum_probs=66.0

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCC-C--CccceEEEC---CCeEEEeecchhhhcCCCcEEEEEe
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEK-D--PVERALVNL---ATAQVEYSEDQQAMVRVPFSFSVVT  116 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~-d--~~~~g~I~L---~~~~V~~~~~~~~~~~r~~~F~I~t  116 (171)
                      ..++.+.|||.|.+...+ |++|||.+.++.+.+....+ +  ......+++   .++...  +.. ....++++|.|.|
T Consensus       374 ~sDv~~~G~l~k~~~~~~-wk~ry~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~pv--~~~-~~~~~~~~~~i~~  449 (478)
T PTZ00267        374 TSDVTHGGYLYKYSSDMR-WKKRYFYIGNGQLRISLSENPENDGVAPKSVNLETVNDVFPV--PEV-YSQKHPNQLVLWF  449 (478)
T ss_pred             cCCcccceEEeccCCCcc-hhhheEEecCCceEEEeccccccCCCCCccccHHHhcccccc--cHH-hcCCCCceEEEEe
Confidence            346789999999887655 99999999988776653321 1  111122223   333211  110 1235799999987


Q ss_pred             -CCceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         117 -KHGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       117 -~~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                       ..+.++|.|+|++||++||.+|+.++
T Consensus       450 ~~~~~~~~~~~~~~~~~~W~~~~~~~~  476 (478)
T PTZ00267        450 NNGQKIIAYAKTAEDRDQWISKFQRAC  476 (478)
T ss_pred             cCCcEEEEecCChHHHHHHHHHHHHHh
Confidence             45779999999999999999999986

>KOG0248|consensus

Probab=98.74  E-value=1.1e-08  Score=94.95  Aligned_cols=105  Identities=15%  Similarity=0.371  Sum_probs=84.3

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC--CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceE
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD--PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGY  121 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d--~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~  121 (171)
                      ....|.||+.+.+...+.|+|||||++++++.||+.+.+  .++.+.|++....+.....      -...|.+++...+|
T Consensus       247 e~~ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d~~s~~~~~~~~------~s~~fqli~~t~~~  320 (936)
T KOG0248|consen  247 ETMEKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKIDIRSVTKLEQQG------AAYAFQLITSTDKM  320 (936)
T ss_pred             chhhcccchhcchHHHHHHHhHheeeccceEEEEEcCCCccccccCcccccccceeeccc------hhHHhhhhhhceeE
Confidence            456799999999988999999999999999999997765  5678889998665543332      24689999999999


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhhhhh-hcccccCC
Q psy7933         122 LMQTAGAREVHEWLYAINPLLAGQI-RSKTSRRQ  154 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~~~~-~~~~~~r~  154 (171)
                      +|.+++.--.++||..|+..+.-+. +.+-+.+.
T Consensus       321 ~~~~~s~~lt~dw~~iL~~~iKv~~~~~~a~~~~  354 (936)
T KOG0248|consen  321 NFMTESERTTHDWVTILSAAIKATTLREMASRVT  354 (936)
T ss_pred             EEeccChhhhhhhHHHHHHHHHHHhccchhhhcC
Confidence            9999999999999999998876433 33333333

>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain

Probab=98.62  E-value=1.2e-07  Score=70.14  Aligned_cols=91  Identities=13%  Similarity=0.237  Sum_probs=65.3

Q ss_pred             eEEEeeeC----CCCCceEEEEEEeCCcEEEecCCCC-----CccceEEECC--CeEEEee-cchhhhcCCCcEEEEEeC
Q psy7933          50 GYLNILEQ----KTNGWKKRWVAVRRPYVFIFRDEKD-----PVERALVNLA--TAQVEYS-EDQQAMVRVPFSFSVVTK  117 (171)
Q Consensus        50 GwL~K~g~----~~~~WkrRWFVL~~~~L~yYk~~~d-----~~~~g~I~L~--~~~V~~~-~~~~~~~~r~~~F~I~t~  117 (171)
                      |||..+-.    ..+.||.||++|++..|++|+..--     ..|....+|-  -.++... +..+...++++||.|-|+
T Consensus         3 GW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irtg   82 (108)
T cd01258           3 GWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRTG   82 (108)
T ss_pred             eecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEEcC
Confidence            88877633    2369999999999999999997643     2345555554  2222221 111101268899999998


Q ss_pred             C--ceEEEEeCCHHHHHHHHHHHHH
Q psy7933         118 H--GGYLMQTAGAREVHEWLYAINP  140 (171)
Q Consensus       118 ~--rt~~f~A~s~~E~~~WI~aI~~  140 (171)
                      .  .+++|..++..|+..|.+||++
T Consensus        83 ~~vesh~fsVEt~~dL~~W~raiv~  107 (108)
T cd01258          83 TQVENHYLRVETHRDLASWERALVR  107 (108)
T ss_pred             CceeeEEEEecCHHHHHHHHHHHhc
Confidence            7  5699999999999999999975

Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PLN02866 phospholipase D

Probab=98.57  E-value=5.9e-07  Score=87.11  Aligned_cols=100  Identities=17%  Similarity=0.398  Sum_probs=72.3

Q ss_pred             CceeEEeEEEeee-----C--C-C------------CCceEEEEEEeCCcEEEecCCCCCccceEEECC---------Ce
Q psy7933          44 PVVSRKGYLNILE-----Q--K-T------------NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLA---------TA   94 (171)
Q Consensus        44 ~~v~k~GwL~K~g-----~--~-~------------~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~---------~~   94 (171)
                      ..-.|+||+.|+.     +  . .            ..|.||||||+..+|.|.+++.+.++..+|-..         +.
T Consensus       180 g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~~~v~lfD~~~~~~~~~~~  259 (1068)
T PLN02866        180 GPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKPLDIIVFDVLPASNGNGEG  259 (1068)
T ss_pred             CCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCceeEEEEEecccccccCCCc
Confidence            3356999999991     1  0 0            269999999999999999888887776665332         11


Q ss_pred             EEEeecchhhhcCCCcEEEEEeCCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933          95 QVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus        95 ~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .+...........-.+.|.|.+.+|...|.|.|..++.+|+.+|+.+..
T Consensus       260 ~~~~~~~~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~  308 (1068)
T PLN02866        260 QISLAKEIKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGL  308 (1068)
T ss_pred             ceeecccccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHh
Confidence            1111111100012367999999999999999999999999999999863

>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain

Probab=98.57  E-value=5.8e-07  Score=64.24  Aligned_cols=87  Identities=15%  Similarity=0.139  Sum_probs=65.3

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCC-cEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEE
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRP-YVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQ  124 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~-~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~  124 (171)
                      +++.|.+.|+.+.  .+|||=|+|.+. .|+|+. +.....+|.|+++.+.+....      .....|.|.|++|+|+|.
T Consensus         1 Il~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvd-p~~~~~KgeIp~s~~~l~v~~------~~~~~F~I~Tp~rty~le   71 (89)
T cd01262           1 ILKIGAVKKRKGL--FAKKRQLILTNGPRLIYVD-PVKKVVKGEIPWSDVELRVEV------KNSSHFFVHTPNKVYSFE   71 (89)
T ss_pred             Cceeeeeeehhcc--ccceeeEEEecCceEEEEc-CCcCeEEeEecccccceEEEE------ecCccEEEECCCceEEEE
Confidence            4678999988763  779999999864 565555 445588999999873222111      234689999999999995


Q ss_pred             eCCHHHHHHHHHHHHHHh
Q psy7933         125 TAGAREVHEWLYAINPLL  142 (171)
Q Consensus       125 A~s~~E~~~WI~aI~~~~  142 (171)
                       |-......|+++|+.+.
T Consensus        72 -D~~~~a~~W~~~I~~~~   88 (89)
T cd01262          72 -DPKGRASQWKKAIEDLQ   88 (89)
T ss_pred             -CCCCCHHHHHHHHHHHh
Confidence             55688899999999864

3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG1117|consensus

Probab=98.53  E-value=6.7e-08  Score=91.48  Aligned_cols=94  Identities=21%  Similarity=0.379  Sum_probs=82.8

Q ss_pred             ceeEEeEEEeeeCCCC-CceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEE
Q psy7933          45 VVSRKGYLNILEQKTN-GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLM  123 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~-~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f  123 (171)
                      .+++.|||-|..+.+. ..+|||+.+.+..+.||.++++....|.|.+..+..+..       -..+.|+|+|+.|+|.|
T Consensus        86 p~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k~py~k~~i~va~is~v~~-------~gd~kfevitn~r~fvf  158 (1186)
T KOG1117|consen   86 PVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPKDPYSKGPIPVAAISAVRN-------FGDNKFEVITNQRTFVF  158 (1186)
T ss_pred             chhhcchhhccCcCcccccCccceecCCCCccccCCCCCCCCCCceeeehhhhhhh-------ccCceEEEEecceEEEE
Confidence            4889999999988776 999999999999999999999999999999977643321       13478999999999999


Q ss_pred             EeCCHHHHHHHHHHHHHHhhhh
Q psy7933         124 QTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       124 ~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      .++++.++..|+..++.....|
T Consensus       159 r~e~~~~r~~w~s~l~s~~~~Q  180 (1186)
T KOG1117|consen  159 RQESEGERFIWVSPLQSALKEQ  180 (1186)
T ss_pred             ecCCcccceeeechhhhcchhh
Confidence            9999999999999999998777

>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis

Probab=98.50  E-value=2.1e-06  Score=64.49  Aligned_cols=94  Identities=12%  Similarity=0.111  Sum_probs=65.3

Q ss_pred             eEEEeeeCCC-----CCceEEEEEEeC--CcEEEecCCCC-C----ccceEEECCCeEEEeecchhhhcC----CCcEEE
Q psy7933          50 GYLNILEQKT-----NGWKKRWVAVRR--PYVFIFRDEKD-P----VERALVNLATAQVEYSEDQQAMVR----VPFSFS  113 (171)
Q Consensus        50 GwL~K~g~~~-----~~WkrRWFVL~~--~~L~yYk~~~d-~----~~~g~I~L~~~~V~~~~~~~~~~~----r~~~F~  113 (171)
                      .||.|-....     ...++|||-|..  .+|+|...+.. .    ...+.|.|..+....+....+...    -.++|.
T Consensus        13 ~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~~~~si~   92 (123)
T PF12814_consen   13 EWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPDHNKSII   92 (123)
T ss_pred             cEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccccccceEEE
Confidence            4788877655     589999999986  46777664321 1    123456676665444322111111    246889


Q ss_pred             EEeCCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         114 VVTKHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       114 I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |.|++|+..|.|++.++.+-|+.+|+.++.
T Consensus        93 i~t~~R~L~l~a~s~~~~~~W~~aL~~L~~  122 (123)
T PF12814_consen   93 IVTPDRSLDLTAPSRERHEIWFNALRYLLQ  122 (123)
T ss_pred             EEcCCeEEEEEeCCHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999998763

During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex

>KOG0932|consensus

Probab=98.47  E-value=4.6e-08  Score=89.27  Aligned_cols=101  Identities=22%  Similarity=0.403  Sum_probs=68.4

Q ss_pred             CCceeEEeEEEeeeC---------CCC-CceEEEEEEeCCcEEEecCCCCC-ccceEEECCCe-EEEee--cchhhhcCC
Q psy7933          43 SPVVSRKGYLNILEQ---------KTN-GWKKRWVAVRRPYVFIFRDEKDP-VERALVNLATA-QVEYS--EDQQAMVRV  108 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~---------~~~-~WkrRWFVL~~~~L~yYk~~~d~-~~~g~I~L~~~-~V~~~--~~~~~~~~r  108 (171)
                      +-.+.|.|+|..+-+         .++ .||.=|-||++-.||+-|++-.. +.+-.-+|.++ .|...  .-.....+|
T Consensus       503 sa~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kalse~~lknavsvHHALAt~AtdY~KK  582 (774)
T KOG0932|consen  503 SAATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALSESDLKNAVSVHHALATPATDYSKK  582 (774)
T ss_pred             CchhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchhhhhhhhhhhhhhhhcCCCcccccC
Confidence            345679999976532         222 88888889998888777765321 11111123332 22211  001124589


Q ss_pred             CcEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         109 PFSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       109 ~~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +|+|.|.|.+ |.|+|||.+.+||+.||..|+-|.+
T Consensus       583 p~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA  618 (774)
T KOG0932|consen  583 PHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVAA  618 (774)
T ss_pred             CceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHH
Confidence            9999999987 9999999999999999999999876

>KOG1739|consensus

Probab=98.43  E-value=2.8e-07  Score=82.85  Aligned_cols=94  Identities=17%  Similarity=0.336  Sum_probs=80.3

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC--CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceE
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD--PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGY  121 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d--~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~  121 (171)
                      .-+...|+|.|.......|+-|||||..+.|.||+++.+  .-.+|.|.|..+.+.+-+..      .+.|-|.++...+
T Consensus        22 gw~e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~E~~hGcRgsi~l~ka~i~ahEfD------e~rfdIsvn~nv~   95 (611)
T KOG1739|consen   22 GWVERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSEDETEHGCRGSICLSKAVITAHEFD------ECRFDISVNDNVW   95 (611)
T ss_pred             CchhhcceeeeeecccccccceEEEEcccchhhhhhhhhhhcccceeeEeccCCcccccch------hheeeeEecccee
Confidence            345588999999999999999999999999999998765  35799999998877654432      3679999999999


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      ++.|.....++.||++|.....
T Consensus        96 ~lra~~~~hr~~w~d~L~wmk~  117 (611)
T KOG1739|consen   96 YLRAQDPDHRQQWIDALEWMKT  117 (611)
T ss_pred             eehhcCcHHHHHHHHHHHHHhh
Confidence            9999999999999999998665

>KOG3751|consensus

Probab=98.42  E-value=1.3e-06  Score=79.19  Aligned_cols=121  Identities=20%  Similarity=0.293  Sum_probs=80.1

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEE---ECC--CeEEEeecchhhhcCCCcEEEEEeC-
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALV---NLA--TAQVEYSEDQQAMVRVPFSFSVVTK-  117 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I---~L~--~~~V~~~~~~~~~~~r~~~F~I~t~-  117 (171)
                      ..+..+|+|+-++...|.|||-|||||...|||+-..+..+++..-   ++.  ++-+...-.+.--.--.++|.|... 
T Consensus       315 ~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~tsk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~K~~~  394 (622)
T KOG3751|consen  315 SPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTSKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCIKPNK  394 (622)
T ss_pred             CCccccceeeecccccccceeEEEEEecCcceEccCCCCCCchhhHHHHhcccCceEEeecchhccCCCCCceEEeeecc
Confidence            4567999999999999999999999999999999766654444321   222  2222211111000012567777642 


Q ss_pred             ----Cce-EEEEeCCHHHHHHHHHHHHHHhhhhhh-----cccccCCCCCCCCCCCC
Q psy7933         118 ----HGG-YLMQTAGAREVHEWLYAINPLLAGQIR-----SKTSRRQPPASPALGPS  164 (171)
Q Consensus       118 ----~rt-~~f~A~s~~E~~~WI~aI~~~~~~~~~-----~~~~~r~~~~~~~~~~~  164 (171)
                          .|. -+|+|+++.-+.-|+.||+-+.-|...     ...++|..+.+||..|+
T Consensus       395 ~~~~~r~lk~lCAEDe~t~~~WltAiRl~KyG~qL~~ny~~~~q~r~~~~~~assp~  451 (622)
T KOG3751|consen  395 LRNKRRFLKMLCAEDEQTRTCWLTAIRLLKYGMQLYQNYERAQQIRRETLSPASSPS  451 (622)
T ss_pred             ccCcccceeeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccCcc
Confidence                222 589999999999999999977655441     33556777777776654

>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain

Probab=98.41  E-value=3.1e-07  Score=67.83  Aligned_cols=96  Identities=8%  Similarity=0.187  Sum_probs=70.8

Q ss_pred             ceeEEeEEEeeeCCCC-CceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ceEE
Q psy7933          45 VVSRKGYLNILEQKTN-GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GGYL  122 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~-~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt~~  122 (171)
                      +++..||+.|.|+.+- .|++|||-|-.+.|.+|....+ .....|.+.++.-.. ++. ...+-.+|..|...+ ..|+
T Consensus         2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~-~~~eLi~M~~i~~V~-~e~-~~iK~~~CI~ik~k~~~k~v   78 (116)
T cd01240           2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEA-NKPELITMDQIEDVS-VEF-QQIKEENCILLKIRDEKKIV   78 (116)
T ss_pred             ceEEeeehhhhCCHHHHHHHHHHheeCcceeeecccccc-cCCcEEEeehhhhcc-hhh-eeeccCceEEEEEcCCceEE
Confidence            6789999999998765 9999999999999999755444 333445454442111 111 122456889888864 6699


Q ss_pred             EEeCCHHHHHHHHHHHHHHhh
Q psy7933         123 MQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |.++++.+..+|...|..+..
T Consensus        79 lt~~d~i~l~qW~~elr~a~r   99 (116)
T cd01240          79 LTNSDEIELKQWKKELRDAHR   99 (116)
T ss_pred             EecCCcHHHHHHHHHHHHHHH
Confidence            999999999999999998754

Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or

>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain

Probab=98.41  E-value=6.4e-06  Score=59.77  Aligned_cols=90  Identities=13%  Similarity=0.145  Sum_probs=68.0

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC-CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC---ce
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD-PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH---GG  120 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d-~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~---rt  120 (171)
                      ..+++|-|.-.+.    =+-|++-|-+..|.|-|...+ ..-+..|.+.+..|....+     +.++.|.|...+   +.
T Consensus         3 eLlleg~l~~~~~----~~eR~vFLFe~~ll~~K~~~~~y~~K~~i~~~~l~i~e~~~-----~d~~~F~v~~~~~p~~~   73 (97)
T cd01222           3 DLLLEGRFREHGG----GKPRLLFLFQTMLLIAKPRGDKYQFKAYIPCKNLMLVEHLP-----GEPLCFRVIPFDDPKGA   73 (97)
T ss_pred             ceeeeceEEeecC----CCceEEEEecccEEEEEecCCeeEEEEEEEecceEEecCCC-----CCCcEEEEEecCCCceE
Confidence            4567888764443    235999999999988886554 3456778888887764332     348999997653   78


Q ss_pred             EEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         121 YLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       121 ~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |.|+|.|.++...||++|+.++.
T Consensus        74 ~~l~A~s~e~K~~W~~~i~~~i~   96 (97)
T cd01222          74 LQLTARNREEKRIWTQQLKRAML   96 (97)
T ss_pred             EEEEecCHHHHHHHHHHHHHHhh
Confidence            99999999999999999998864

Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain

Probab=98.29  E-value=1.1e-05  Score=58.91  Aligned_cols=94  Identities=14%  Similarity=0.128  Sum_probs=68.3

Q ss_pred             eeEEeEEEeeeCCCC-CceEEEEEEeCCcEEEec--CCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEE
Q psy7933          46 VSRKGYLNILEQKTN-GWKKRWVAVRRPYVFIFR--DEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYL  122 (171)
Q Consensus        46 v~k~GwL~K~g~~~~-~WkrRWFVL~~~~L~yYk--~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~  122 (171)
                      ++.+|=|..-....+ .=+|.-|.|-++.|.|-.  .++..+-...++|.++.|+..+|.+   .-+|+|.|.|+.+++.
T Consensus         2 ~i~~G~l~e~~~~~~kp~~rv~~FLfND~Lvva~~~~~~ky~~~~~~~L~~i~V~ni~D~~---~~kNafki~t~~~s~i   78 (100)
T cd01226           2 VILYGELEEFDVETKKPVQRVMLFLLNDRLIVGNINAAGKYVMESTYSLNSVAVVNVKDRE---NAKKVLKLLIFPESRI   78 (100)
T ss_pred             EEEcCcEEEechhhCCccceEEEEEeccEEEEEEecccceEEEEEEEehHHeEEEecCCCc---CcCceEEEEeCCccEE
Confidence            456666665554444 333454666666666542  2333455677899999887766643   4589999999999999


Q ss_pred             EEeCCHHHHHHHHHHHHHHh
Q psy7933         123 MQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~  142 (171)
                      ++|++.++..+||..|+++.
T Consensus        79 ~qaes~~~K~eWl~~le~a~   98 (100)
T cd01226          79 YQCESARIKTEWFEELEQAK   98 (100)
T ss_pred             EEeCCHHHHHHHHHHHHHHh
Confidence            99999999999999999875

Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.26  E-value=3.2e-06  Score=76.44  Aligned_cols=99  Identities=15%  Similarity=0.239  Sum_probs=60.5

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCc-----------------cceEE--ECCCeEEEeecchh
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPV-----------------ERALV--NLATAQVEYSEDQQ  103 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~-----------------~~g~I--~L~~~~V~~~~~~~  103 (171)
                      ....+.+|.+.+.+... .||+||+.+++.-+--+....+..                 ....|  ++++..-.. +-..
T Consensus       370 ~~~~~~~g~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  447 (496)
T PTZ00283        370 GGLTLYEGIVKKQSSDL-SWKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVF-PVPS  447 (496)
T ss_pred             CCceeeeeEEecccCCc-ccceeEEEEeeecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccc-cccH
Confidence            34677889999876544 499999999742111110000100                 11122  222211111 1111


Q ss_pred             hhc--CCCcEEEEEe-CCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         104 AMV--RVPFSFSVVT-KHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       104 ~~~--~r~~~F~I~t-~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .+.  +.+|+|+|.+ +++.+.|+|.+++||+.||++||+++.
T Consensus       448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (496)
T PTZ00283        448 KYTGSNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLG  490 (496)
T ss_pred             HhhCCCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcC
Confidence            122  3799999976 568999999999999999999999874

>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain

Probab=98.16  E-value=6.5e-05  Score=55.66  Aligned_cols=95  Identities=16%  Similarity=0.188  Sum_probs=70.2

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCC---C-CccceEEECCCeEEEeecchhhh---cCCCcEEEEEeCC
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEK---D-PVERALVNLATAQVEYSEDQQAM---VRVPFSFSVVTKH  118 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~---d-~~~~g~I~L~~~~V~~~~~~~~~---~~r~~~F~I~t~~  118 (171)
                      .+.+|=|.+.+...+.=+.|.|.|-++.|.|.|...   + ..-+|.|+|..+.|.-.+|-...   ..-.|.|.|+...
T Consensus         2 li~~Gel~~~s~~~g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~   81 (109)
T cd01224           2 LFLQGEATRQKQNKGWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSES   81 (109)
T ss_pred             ceEeeeEEEEecccCCcccEEEEEecceEEEEecccccCCcEEEEEEEEcccEEEEECCCCccccCCceeEEEEEEEEcC
Confidence            357888887763222234699999999999999542   2 34578999999998776553211   1237899998754


Q ss_pred             --ceEEEEeCCHHHHHHHHHHHHH
Q psy7933         119 --GGYLMQTAGAREVHEWLYAINP  140 (171)
Q Consensus       119 --rt~~f~A~s~~E~~~WI~aI~~  140 (171)
                        ..|.|.|.+.++...|++||..
T Consensus        82 ~~~~~~f~~Kt~e~K~~Wm~a~~~  105 (109)
T cd01224          82 TDEWYLFSFKSAERKHRWLSAFAL  105 (109)
T ss_pred             CCeEEEEEECCHHHHHHHHHHHHH
Confidence              6699999999999999999875

Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PLN00188 enhanced disease resistance protein (EDR2); Provisional

Probab=98.15  E-value=1.5e-05  Score=74.96  Aligned_cols=99  Identities=13%  Similarity=0.197  Sum_probs=68.4

Q ss_pred             ceeEEeEEEeeeCCC-C--CceEEEEEEeCCcEEEecCC-C-CCccceEEECC-CeEEEeecchhhhcC-CCcEEEEEe-
Q psy7933          45 VVSRKGYLNILEQKT-N--GWKKRWVAVRRPYVFIFRDE-K-DPVERALVNLA-TAQVEYSEDQQAMVR-VPFSFSVVT-  116 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~-~--~WkrRWFVL~~~~L~yYk~~-~-d~~~~g~I~L~-~~~V~~~~~~~~~~~-r~~~F~I~t-  116 (171)
                      .+.++|||..-|... +  --++|||||.+.+|.|||.. . ...|..+..+. ++.|+-.- .+...+ --|+|.|+. 
T Consensus         3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~~~pirs~~id~~~rVed~G-r~~~~g~~~yvl~~Yn~   81 (719)
T PLN00188          3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRG-LKTHHGHMVYVLSVYNK   81 (719)
T ss_pred             cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccccccceeeccCCCceEeecC-ceEEcCceEEEEEEecC
Confidence            567999999888532 2  67899999999999999963 2 23444444443 44443211 111112 245777775 


Q ss_pred             --CCceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         117 --KHGGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       117 --~~rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                        ..+...|.|-+-+|...|++||+.++..
T Consensus        82 ~~~~~~~~~~a~~~eea~~W~~a~~~a~~q  111 (719)
T PLN00188         82 KEKYHRITMAAFNIQEALIWKEKIESVIDQ  111 (719)
T ss_pred             CCccccEEEecCCHHHHHHHHHHHHHHHhh
Confidence              3567999999999999999999998874

>KOG4424|consensus

Probab=98.10  E-value=4.5e-06  Score=76.44  Aligned_cols=102  Identities=20%  Similarity=0.300  Sum_probs=79.6

Q ss_pred             ccCCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC-----CccceEEECCCeEEEeecchhhhcCCCcEEEEE
Q psy7933          41 RISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD-----PVERALVNLATAQVEYSEDQQAMVRVPFSFSVV  115 (171)
Q Consensus        41 ~~~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d-----~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~  115 (171)
                      ..+..++|+|-|.|.......-..||++|-++.|.|-+...-     ...+..+.+.++.|..+..    ...++.|.|.
T Consensus       267 ~PsreLiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~~~~v~~~~~----~~~~~tF~~~  342 (623)
T KOG4424|consen  267 SPSRELIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSISHMQVQEDDN----EELPHTFILT  342 (623)
T ss_pred             CcHHHHhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhhcccceeccceeeccCcchhccccc----ccCCceEEEe
Confidence            345678899999999999889999999999998888775541     1223334555555543322    3478999999


Q ss_pred             eCCceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         116 TKHGGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       116 t~~rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      .+.|...|+|.+++|..+||++|+.++....
T Consensus       343 G~~r~vel~a~t~~ek~eWv~~I~~~Id~~k  373 (623)
T KOG4424|consen  343 GKKRGVELQARTEQEKKEWVQAIQDAIDKHK  373 (623)
T ss_pred             cccceEEeecCchhhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999987544

>KOG3531|consensus

Probab=98.07  E-value=7.1e-07  Score=84.46  Aligned_cols=95  Identities=19%  Similarity=0.381  Sum_probs=79.2

Q ss_pred             EEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEEeCC
Q psy7933          48 RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAG  127 (171)
Q Consensus        48 k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~A~s  127 (171)
                      ..|||..+=..-..|+|=|+|..+.+|++||+-+|..+..+.+|-++.|......+ -..|.++|.|.-..-.|+|.|++
T Consensus       926 Lsg~LlrkfknssgwqkLwvvft~fcl~fyKS~qD~~~laslPlLgysvs~P~~~d-~i~K~~vfkl~fk~hvyffraes 1004 (1036)
T KOG3531|consen  926 LSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQDSEPLASLPLLGYSVSIPAEPD-PIQKDYVFKLKFKSHVYFFRAES 1004 (1036)
T ss_pred             hhHHHHHHhhccccceeeeeeecceeeEeecccccccccccccccccccCCCCCCC-CcchhheeeeehhhhHHHHhhhh
Confidence            56777644333449999999999999999999999999999999888876544333 34678999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhh
Q psy7933         128 AREVHEWLYAINPLLA  143 (171)
Q Consensus       128 ~~E~~~WI~aI~~~~~  143 (171)
                      .--.+.|++.|+..-.
T Consensus      1005 ~yt~~rw~evi~~a~~ 1020 (1036)
T KOG3531|consen 1005 YYTFERWMEVITDAPS 1020 (1036)
T ss_pred             hhhhhhHHHHhhcCCc
Confidence            9999999999987543

>KOG3723|consensus

Probab=98.04  E-value=2e-06  Score=78.97  Aligned_cols=102  Identities=16%  Similarity=0.325  Sum_probs=71.9

Q ss_pred             cCCceeEEeEEEeeeCC---CCCceEEEEEEeCCcEEEecCC--CCCccceEEECCCeEEEeecc-hhhhcCCCcEEEEE
Q psy7933          42 ISPVVSRKGYLNILEQK---TNGWKKRWVAVRRPYVFIFRDE--KDPVERALVNLATAQVEYSED-QQAMVRVPFSFSVV  115 (171)
Q Consensus        42 ~~~~v~k~GwL~K~g~~---~~~WkrRWFVL~~~~L~yYk~~--~d~~~~g~I~L~~~~V~~~~~-~~~~~~r~~~F~I~  115 (171)
                      .....+.+|-|.-+.+.   .+.|+-|||.|.+-.|.|-+..  .|... ..|+|..+.-+.... ......-|-.|+|.
T Consensus       731 ~~gqp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~~-~~IDl~~IRSVk~v~~kr~~rslpKAFEIF  809 (851)
T KOG3723|consen  731 QDGQPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSDD-CPIDLSKIRSVKAVAKKRRDRSLPKAFEIF  809 (851)
T ss_pred             CCCCchhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCCC-CCccHHHhhhHHHHHhhhhhcccchhhhee
Confidence            34455777877544443   4599999999999999986643  33323 568887664332111 11111236689999


Q ss_pred             eCCceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         116 TKHGGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       116 t~~rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      |.+.+|.|.|.+++..++|++-|+=+++-
T Consensus       810 TAD~T~ILKaKDeKNAEEWlqCL~IavAH  838 (851)
T KOG3723|consen  810 TADKTYILKAKDEKNAEEWLQCLNIAVAH  838 (851)
T ss_pred             ecCceEEeecccccCHHHHHHHHHHHHHH
Confidence            99999999999999999999999887763

>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain

Probab=97.99  E-value=5.7e-05  Score=56.03  Aligned_cols=79  Identities=11%  Similarity=0.198  Sum_probs=62.4

Q ss_pred             CceEEEEEEeCCcEEEecCCCC---CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ceEEEEeCCHHHHHHHHH
Q psy7933          61 GWKKRWVAVRRPYVFIFRDEKD---PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GGYLMQTAGAREVHEWLY  136 (171)
Q Consensus        61 ~WkrRWFVL~~~~L~yYk~~~d---~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt~~f~A~s~~E~~~WI~  136 (171)
                      -=..|||||-...|++..-...   -.-.|.++|+++.|...++.+   +.++.|+|.-+. ....+.|.+++|+.+||.
T Consensus        27 e~~eRyLvLFp~~LlilS~s~r~sGf~yqGkLPL~~i~v~~lEd~e---~~~~aFeI~G~li~~i~v~C~~~~e~~~Wl~  103 (111)
T cd01225          27 EKRERYLVLFPNVLLMLSASPRMSGFIYQGKLPLTGIIVTRLEDTE---ALKNAFEISGPLIERIVVVCNNPQDAQEWVE  103 (111)
T ss_pred             ccceeEEEEcCceEEEEEcCCCccceEEeeeecccccEEechHhcc---CccceEEEeccCcCcEEEEeCCHHHHHHHHH
Confidence            4457999999999888764321   234678899999987655544   568999999875 678999999999999999


Q ss_pred             HHHHHh
Q psy7933         137 AINPLL  142 (171)
Q Consensus       137 aI~~~~  142 (171)
                      .|++..
T Consensus       104 hL~~~~  109 (111)
T cd01225         104 LLNANN  109 (111)
T ss_pred             HHHhhc
Confidence            999853

Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain

Probab=97.98  E-value=0.0001  Score=55.82  Aligned_cols=94  Identities=18%  Similarity=0.274  Sum_probs=58.6

Q ss_pred             eEEeEEEeeeCCC--------CCceEEEEEEeCCcEEEecCCCCCc--cceEEECCCeEEEeecchh-------hhcCCC
Q psy7933          47 SRKGYLNILEQKT--------NGWKKRWVAVRRPYVFIFRDEKDPV--ERALVNLATAQVEYSEDQQ-------AMVRVP  109 (171)
Q Consensus        47 ~k~GwL~K~g~~~--------~~WkrRWFVL~~~~L~yYk~~~d~~--~~g~I~L~~~~V~~~~~~~-------~~~~r~  109 (171)
                      +|+|.|.......        ..-+-+|+.|-++.|.|-|...+..  -....+...+.|+..+...       .....+
T Consensus         4 vK~GEL~~l~~~~~~~~~~~k~~~~~vylfLFnDlLl~tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~   83 (125)
T cd01221           4 VKRGELTQLEERGSSNILRKKLKARTIYLFLFNDLLLITKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRP   83 (125)
T ss_pred             EEEeeEEEEeccCCcchhcccccCCcEEEEEecceEEEEEecCCCeEEEEeeccccceEEeecccccccccccccccCCC
Confidence            5677766544221        1344689999999999987553211  1111223445555433221       011468


Q ss_pred             cEEEEE------eCCceEEEEeCCHHHHHHHHHHHHH
Q psy7933         110 FSFSVV------TKHGGYLMQTAGAREVHEWLYAINP  140 (171)
Q Consensus       110 ~~F~I~------t~~rt~~f~A~s~~E~~~WI~aI~~  140 (171)
                      |.|.|.      ...+.+.|+|+|+.|+.+||+||..
T Consensus        84 ~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al~~  120 (125)
T cd01221          84 NLFLLTLLRNADDKQAELLLSADSQSDRERWLSALAP  120 (125)
T ss_pred             ceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhcCC
Confidence            999996      2346699999999999999999854

Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG1117|consensus

Probab=97.90  E-value=3.1e-05  Score=73.89  Aligned_cols=99  Identities=17%  Similarity=0.280  Sum_probs=77.1

Q ss_pred             CCceeEEeEEEeeeCCCC----------CceEEEEEEeCCcEEEecCCCCCccceEEECCCeE-E-EeecchhhhcCCCc
Q psy7933          43 SPVVSRKGYLNILEQKTN----------GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQ-V-EYSEDQQAMVRVPF  110 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~----------~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~-V-~~~~~~~~~~~r~~  110 (171)
                      +..+...|+|++.....+          .-.|+|+||-++.|+||.+++...|.|.|++..+. + ...++...-.+-.|
T Consensus       489 s~s~~~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~S~tP~~lI~~~Eivclav~~pd~~pn~~~~f  568 (1186)
T KOG1117|consen  489 SQSTFLCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEKSTTPNGLININEIVCLAVHPPDTYPNTGFIF  568 (1186)
T ss_pred             cccccccceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcCCCCCCceeeccceEEEeecCCCCCCCcCcee
Confidence            355667799998764331          55689999999999999999999999999998652 2 22233222236688


Q ss_pred             EEEEEeC-CceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         111 SFSVVTK-HGGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       111 ~F~I~t~-~rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                      .|+|+.+ +|.|.|-+++.++++.|..+|-..
T Consensus       569 ~fE~~l~~er~~~fgle~ad~l~~wt~aiaKh  600 (1186)
T KOG1117|consen  569 IFEIYLPGERVFLFGLETADALRKWTEAIAKH  600 (1186)
T ss_pred             EEEEeecccceEEeecccHHHHHHHHHHHHHh
Confidence            9999986 699999999999999999988754

>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain

Probab=97.78  E-value=0.00011  Score=53.15  Aligned_cols=85  Identities=15%  Similarity=0.160  Sum_probs=61.7

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCC-------CCCccceEEECCCeEEEeecchhhhcCCCcEEEE-Ee
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDE-------KDPVERALVNLATAQVEYSEDQQAMVRVPFSFSV-VT  116 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~-------~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I-~t  116 (171)
                      ..+++|.|.|.-  .+.=|.|=|.|-++.|.|-+=.       +..+....|+|.++.+...+           |.+ .+
T Consensus         2 ~Lv~eg~lvel~--~~~rK~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl~~~~~~-----------~~~~~~   68 (96)
T cd01228           2 QLVKDSFLVELV--EGSRKLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADLSFPSEP-----------FRIHNK   68 (96)
T ss_pred             cccccceeeeeh--hCCCcceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHheecchh-----------hhcccc
Confidence            357899998866  3344667777888877665421       22345668999988775432           333 46


Q ss_pred             CCceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         117 KHGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       117 ~~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      +.++|.|-|.|+.|+.+|+.+|++.+
T Consensus        69 ~~KSf~~~asS~~Er~eW~~hI~~~~   94 (96)
T cd01228          69 NGKSYTFLLSSDYERSEWRESIQKLQ   94 (96)
T ss_pred             CCceEEEEecCHHHHHHHHHHHHHHh
Confidence            88999999999999999999999865

BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.

>KOG3543|consensus

Probab=97.72  E-value=9.1e-06  Score=75.58  Aligned_cols=99  Identities=19%  Similarity=0.421  Sum_probs=77.2

Q ss_pred             CCceeEEeEEEeeeCCC-CCceEEEEEEeCCc-----EEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEe
Q psy7933          43 SPVVSRKGYLNILEQKT-NGWKKRWVAVRRPY-----VFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVT  116 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~-~~WkrRWFVL~~~~-----L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t  116 (171)
                      .++.-.+|||+--|... +.||||||||-.-.     +.-|+..+ .+|...|.|.+.+|.+.+....+.+..+.|..+-
T Consensus       461 p~nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyrekk-aepqel~qldgytvdytdp~pglqgg~~ffnavk  539 (1218)
T KOG3543|consen  461 PPNMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYREKK-AEPQELIQLDGYTVDYTDPSPGLQGGKHFFNAVK  539 (1218)
T ss_pred             CCccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhhcc-cChHHHhhccCeeeccCCCCCccccchHHHHHhc
Confidence            46777899999887543 59999999997643     44455443 4677889999999998765444556677788777


Q ss_pred             CCceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         117 KHGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       117 ~~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      .+.+..|..+++.|+.-||+|+-.+.
T Consensus       540 egdtvifasddeqdr~lwvqamyrat  565 (1218)
T KOG3543|consen  540 EGDTVIFASDDEQDRHLWVQAMYRAT  565 (1218)
T ss_pred             cCceEEeccCchhhhhHHHHHHHHhh
Confidence            78899999999999999999997754

>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain

Probab=97.70  E-value=0.0011  Score=49.49  Aligned_cols=93  Identities=11%  Similarity=0.228  Sum_probs=61.6

Q ss_pred             eeEEeEEEeeeCCC---CCceEEEEEEeCCcEEEecCCCCC----c----cceEEECCCeEEEeecchhhhcCCCcEEEE
Q psy7933          46 VSRKGYLNILEQKT---NGWKKRWVAVRRPYVFIFRDEKDP----V----ERALVNLATAQVEYSEDQQAMVRVPFSFSV  114 (171)
Q Consensus        46 v~k~GwL~K~g~~~---~~WkrRWFVL~~~~L~yYk~~~d~----~----~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I  114 (171)
                      .+.+|-+.-..+..   +.=+.|-+-|-...|.|-+...+.    .    -+..|.++++.++...+     +.++.|+|
T Consensus         5 Ll~Q~~f~v~~~~~~~~~K~~eR~vFLFe~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~l~l~e~v~-----gd~~kF~i   79 (114)
T cd01232           5 LLLQDTFQVWDPKAGLIQKGRERRVFLFEQSIIFAKEVKKKKQFGNPKYIYKSKLQVSKMGLTEHVE-----GDPCRFAL   79 (114)
T ss_pred             eEEEccEEEEeCCccccCCCceeEEEEeeceEEEEEEeccCCCCCceeEEEecceeeeeeEeEEccC-----CCCceEEE
Confidence            34555444443332   233557777877878777753321    1    13667787777654332     34788988


Q ss_pred             EeCC-----ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         115 VTKH-----GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       115 ~t~~-----rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      ...+     .+|.++|.|.++.+.||..|++++.
T Consensus        80 ~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~  113 (114)
T cd01232          80 WSGDPPISDNRIILKANSQETKQEWVKKIREILQ  113 (114)
T ss_pred             EeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence            6543     5799999999999999999999864

Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain

Probab=97.67  E-value=0.00019  Score=52.47  Aligned_cols=83  Identities=10%  Similarity=0.239  Sum_probs=55.7

Q ss_pred             CCCCceEEEEEEeC----CcEEEecC--CCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCc-eEEEEeCCHHH
Q psy7933          58 KTNGWKKRWVAVRR----PYVFIFRD--EKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHG-GYLMQTAGARE  130 (171)
Q Consensus        58 ~~~~WkrRWFVL~~----~~L~yYk~--~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~r-t~~f~A~s~~E  130 (171)
                      ....|+|.=.+|+.    ..|.+|-.  ++.++++-.|....+.-+.....=.|..+.|.|.|.-.+. .|.|.|.+.++
T Consensus        17 ~~~~WqkcRl~L~~~~gg~~le~~~~~pPKssrpk~~v~C~~I~EvR~tt~LEmPD~~nTFvLK~~~~~eyI~Ea~d~~q   96 (107)
T cd01231          17 SGARWQRGRLVLRKAVGGYMLEFYLPLPPKSSKPKLQVACSSISEVRECTRLEMPDNLYTFVLKVDDNTDIIFEVGDEQQ   96 (107)
T ss_pred             CccccceeeEEEEecCCCceEEEEccCCCCCCCCccccchhhhhhhhhcccccccCcccEEEEEecCCceEEEEcCCHHH
Confidence            44589998788863    34555554  7777887776554332111000001345789999987654 59999999999


Q ss_pred             HHHHHHHHHH
Q psy7933         131 VHEWLYAINP  140 (171)
Q Consensus       131 ~~~WI~aI~~  140 (171)
                      |+.|+..|+.
T Consensus        97 ~~SWla~Ir~  106 (107)
T cd01231          97 LNSWLAELRY  106 (107)
T ss_pred             HHHHHHHHhc
Confidence            9999999974

LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.

>PF15406 PH_6: Pleckstrin homology domain

Probab=97.61  E-value=0.00017  Score=53.31  Aligned_cols=61  Identities=20%  Similarity=0.280  Sum_probs=44.8

Q ss_pred             cEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEEeCCHHHHHHHHHHHHH
Q psy7933          73 YVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINP  140 (171)
Q Consensus        73 ~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~  140 (171)
                      .|+|-|.++...|.|+|+|.++.-.. .      .-.+-|.+...+....|+|.+..|++.||.+|+.
T Consensus        51 LLF~~K~~dka~P~GiinLadase~~-~------~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk~  111 (112)
T PF15406_consen   51 LLFFSKAEDKASPSGIINLADASEPE-K------DGSNKFHFKIKGHKHTFEAASAAERDNWVAQLKA  111 (112)
T ss_pred             EEEEeccccccCCcceEehhhccccc-c------CCCceEEEEeCCceeeeecCCHHHhccHHHHhhc
Confidence            34454545556899999998774221 1      1345677777888899999999999999999863

>PF15404 PH_4: Pleckstrin homology domain

Probab=97.50  E-value=0.0011  Score=53.49  Aligned_cols=49  Identities=22%  Similarity=0.276  Sum_probs=38.9

Q ss_pred             EEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC-----------CccceEEECCCeEE
Q psy7933          48 RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD-----------PVERALVNLATAQV   96 (171)
Q Consensus        48 k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d-----------~~~~g~I~L~~~~V   96 (171)
                      ++|+|+.+..+...++++++||..+.|..|+.-..           ..-..+|+|.+|-|
T Consensus         1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~~~Rs~tG~~~~~~~~~~~~tI~L~dcYv   60 (185)
T PF15404_consen    1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQLFKRSRTGFAKPTVHYEHYLTIPLRDCYV   60 (185)
T ss_pred             CCceeeecCCCCCCceEEEEEEeCCEEEEEEEEeeccCCcccceEEeEeeeeeccCCceE
Confidence            47999999999999999999999999999986321           12346688888754

>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain

Probab=97.35  E-value=0.0042  Score=47.57  Aligned_cols=80  Identities=11%  Similarity=0.227  Sum_probs=57.3

Q ss_pred             eEEEEEEeCCcEEEecCCCCC---------ccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC--ceEEEEeCCHHHH
Q psy7933          63 KKRWVAVRRPYVFIFRDEKDP---------VERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH--GGYLMQTAGAREV  131 (171)
Q Consensus        63 krRWFVL~~~~L~yYk~~~d~---------~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~--rt~~f~A~s~~E~  131 (171)
                      +.|.+.|-+..|.+-|-..+.         .-+..|.+..+.+....     .+.++.|+|.+.+  ..|.|+|.|.+..
T Consensus        30 ~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~lglte~v-----~gd~~kFeiw~~~~~~~yilqA~t~e~K  104 (133)
T cd01227          30 MQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQSLKMTAVGITENV-----KGDTKKFEIWYNAREEVYILQAPTPEIK  104 (133)
T ss_pred             ceeEEEEecceEEEEEEeccCCCCCcceeEEEeeeEEeecccccccC-----CCCccEEEEEeCCCCcEEEEEcCCHHHH
Confidence            468888888888888754321         12445666655554322     1457889998754  5699999999999


Q ss_pred             HHHHHHHHHHhhhhhh
Q psy7933         132 HEWLYAINPLLAGQIR  147 (171)
Q Consensus       132 ~~WI~aI~~~~~~~~~  147 (171)
                      +.|++.|..++..|..
T Consensus       105 ~~Wv~~I~~iL~~Q~~  120 (133)
T cd01227         105 AAWVNEIRKVLTSQLQ  120 (133)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999887753

Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG1738|consensus

Probab=97.33  E-value=2.6e-05  Score=72.10  Aligned_cols=74  Identities=15%  Similarity=0.373  Sum_probs=58.2

Q ss_pred             ceeEEeEEEeeeCCC---CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceE
Q psy7933          45 VVSRKGYLNILEQKT---NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGY  121 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~---~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~  121 (171)
                      ....+|||.+++...   ..|+|-||||++.+||.|.++++..+.++|.|...+|....+   ..+++..|........|
T Consensus       561 ~G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~~~~~e~~i~l~~~~i~~a~e---~~~~~~~~~~~~~~~~f  637 (638)
T KOG1738|consen  561 RGDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHRVRAAESVIKLPLFTISVAEE---VLGKPELTGEKFRQKSF  637 (638)
T ss_pred             cchhhccchhhccchHHHHHhhhheeeecCchhhhhhhhhhhchhheeeccchhhhhHHH---hccCHhhhccchhhccc
Confidence            355889999887551   199999999999999999999999999999999888866544   34667777665544444

>KOG1737|consensus

Probab=97.31  E-value=0.00011  Score=70.16  Aligned_cols=94  Identities=19%  Similarity=0.214  Sum_probs=70.6

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC--CccceEEECCCeEEEeecchhhhcCCCcEEEEE-eCCceE
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD--PVERALVNLATAQVEYSEDQQAMVRVPFSFSVV-TKHGGY  121 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d--~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~-t~~rt~  121 (171)
                      ....+|||.|.....+.|.+|||+|.++.|.||++...  ..+.|.|++....+...+.        .-+.+. .....|
T Consensus        76 ~~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~~~~~~~~~~~~~~a~i~~~~~--------~~~~~~~~~~q~~  147 (799)
T KOG1737|consen   76 GASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSFSKTTCGGGINLVTAWIQNGER--------MDICSVDGSCQIY  147 (799)
T ss_pred             cccccceeeccccccCCcccceEEecCcceeeeccCCccccCCCCcccccccccccCCC--------cccchhhcccchh
Confidence            44578999999999999999999999999999987654  4577888886665543221        122222 225779


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      +..+.+..+...||.+++-....++
T Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~  172 (799)
T KOG1737|consen  148 LVELSKKLQRQGWLHALELAPLIAV  172 (799)
T ss_pred             hhhhhHHHhhcchhhhhhhccchhh
Confidence            9999999999999999987744333

>KOG1451|consensus

Probab=97.27  E-value=0.00047  Score=63.87  Aligned_cols=96  Identities=18%  Similarity=0.322  Sum_probs=64.2

Q ss_pred             cCCceeEEeEEEeeeC--CCCCceEEEEEEeCCcEEE----ecCCC--CCccceEEECCCeEEEeecchhhhcCCCcEEE
Q psy7933          42 ISPVVSRKGYLNILEQ--KTNGWKKRWVAVRRPYVFI----FRDEK--DPVERALVNLATAQVEYSEDQQAMVRVPFSFS  113 (171)
Q Consensus        42 ~~~~v~k~GwL~K~g~--~~~~WkrRWFVL~~~~L~y----Yk~~~--d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~  113 (171)
                      ......++|||+-+..  .++.|.|-|||-.+..-.+    +....  +..+..++.|..|.-...+.    ..+.|||-
T Consensus       261 ~p~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g~k~g~~~~~~lKsC~RRktdS----IdKRFCFD  336 (812)
T KOG1451|consen  261 RPTPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTGTKMGQTATFKLKSCSRRKTDS----IDKRFCFD  336 (812)
T ss_pred             CCCCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCCCcCCCcceEEehhhccCcccc----cccceeee
Confidence            3556789999988763  4559999999987653222    21111  11233344555553222121    24789999


Q ss_pred             EEeCC--ceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         114 VVTKH--GGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       114 I~t~~--rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                      |.+..  .+..+||-|++++..||+|++-.
T Consensus       337 ve~~erpgviTmQALSE~drrlWmeAMDG~  366 (812)
T KOG1451|consen  337 VEVEERPGVITMQALSEKDRRLWMEAMDGA  366 (812)
T ss_pred             eeecccCCeeehHhhhhhHHHHHHHHhcCC
Confidence            99976  55999999999999999998754

>cd01223 PH_Vav Vav pleckstrin homology (PH) domain

Probab=97.08  E-value=0.0049  Score=46.19  Aligned_cols=98  Identities=16%  Similarity=0.254  Sum_probs=67.4

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC------ccceEEECCCeEEEeecchhhh---cCCCcEEEEEe
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP------VERALVNLATAQVEYSEDQQAM---VRVPFSFSVVT  116 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~------~~~g~I~L~~~~V~~~~~~~~~---~~r~~~F~I~t  116 (171)
                      +...|.|.-+......=+.|+..|-+..|.+.|...+.      .-+..+.|..+.|+..+..+..   .+-.+.|.|.+
T Consensus         4 ~~~DGelk~k~~~~~k~k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L~~   83 (116)
T cd01223           4 PLLDGEVRIKASEDQKTKLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYLAH   83 (116)
T ss_pred             cccCCceEEeEeccCCCceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEEEe
Confidence            34566665555544456689988888888888865542      2344566777666654321111   13467899988


Q ss_pred             CC--ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         117 KH--GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       117 ~~--rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .+  ..|.|.|.++++.+.|+.+|..++.
T Consensus        84 ~~~~~~~~f~~Ktee~K~kWm~al~~a~s  112 (116)
T cd01223          84 KQGKTGFTFYFKTEHLRKKWLKALEMAMS  112 (116)
T ss_pred             cCCCccEEEEeCCHHHHHHHHHHHHHHHh
Confidence            65  4599999999999999999998764

Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG4424|consensus

Probab=97.04  E-value=0.00077  Score=62.14  Aligned_cols=103  Identities=15%  Similarity=0.187  Sum_probs=77.0

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEe---CCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceE
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVR---RPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGY  121 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~---~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~  121 (171)
                      .-.-.+.|.+-...++.|+.-|+++-   ...+|.|..++|..+...|+|.+|.|...+... -....++|.++-....+
T Consensus       496 ~~~~~s~l~~~~~~~~~g~~a~~~vP~~d~~~~~~Yg~~qDv~a~~~iPl~~~~v~~pe~~~-~~D~~~~~k~~~s~~~~  574 (623)
T KOG4424|consen  496 ENVICSHLKYMEAAGKTGILAWSVVPKSDPLVDYSYGSPQDVRAQATIPLPGVEVTIPEFVR-REDLFHVFKLVQSHLSW  574 (623)
T ss_pred             CceehhhHHHHhhcCccceeeeeeccCCCCccccccCCccccccccccccCccccCCCcccc-cchhcchhhhhhhccee
Confidence            33344444444446679999999984   458999999999999999999999876322211 11245677777777899


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhhhhhhc
Q psy7933         122 LMQTAGAREVHEWLYAINPLLAGQIRS  148 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~~~~~~  148 (171)
                      +|.|++++-.+.|+..|.-+..+.+..
T Consensus       575 ~~~a~~~q~qq~wl~~l~~A~~~d~~~  601 (623)
T KOG4424|consen  575 HLAADDEQLQQRWLEVLLLAVSGDLKE  601 (623)
T ss_pred             eeccCCHHHHHHHHHHHHhhhcccccC
Confidence            999999999999999999988876543

>KOG4236|consensus

Probab=96.82  E-value=0.0011  Score=61.38  Aligned_cols=101  Identities=17%  Similarity=0.220  Sum_probs=74.9

Q ss_pred             cCCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCe-EEEeecchh--hhcCCCcEEEEEeCC
Q psy7933          42 ISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATA-QVEYSEDQQ--AMVRVPFSFSVVTKH  118 (171)
Q Consensus        42 ~~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~-~V~~~~~~~--~~~~r~~~F~I~t~~  118 (171)
                      .+....|+||+.--......-||.|..|+..++..|.++....-...|+|..+ .|+......  .....||||+|.|.+
T Consensus       409 ksst~~kEGWmvHyt~~d~lRkrHYWrldsk~itlfqn~s~~ryYkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~T~~  488 (888)
T KOG4236|consen  409 KSSTKLKEGWMVHYTSKDNLRKRHYWRLDSKCITLFQNESTNRYYKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIRTAT  488 (888)
T ss_pred             cchhhhhcceEEEEechhhhhhhhhheeccceeEeeecCCCceeEEeecHHHhheeeccCCcccCCCCCCCceEEEEeee
Confidence            46778999999877766667788888999999999999988888888999866 333322211  012469999999998


Q ss_pred             ceEEEEeCC------------HHHHHHHHHHHHHHhh
Q psy7933         119 GGYLMQTAG------------AREVHEWLYAINPLLA  143 (171)
Q Consensus       119 rt~~f~A~s------------~~E~~~WI~aI~~~~~  143 (171)
                      -+|+ ..++            .+....|-.||++.+-
T Consensus       489 ~vyf-Vge~p~~~~~~~~g~g~d~a~~w~~ai~~alM  524 (888)
T KOG4236|consen  489 TVYF-VGENPSSTPGGESGVGLDAAQGWETAIQQALM  524 (888)
T ss_pred             EEEE-ecCCCCCCccccccccchhhccCchhhhhccc
Confidence            5554 4455            5558889999998753

>KOG0705|consensus

Probab=96.76  E-value=0.00053  Score=63.38  Aligned_cols=36  Identities=17%  Similarity=0.354  Sum_probs=30.6

Q ss_pred             cEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         110 FSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       110 ~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      ++|+|+... .+++|.|.+.+|++.||+||+..+.-.
T Consensus       446 e~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIlaS  482 (749)
T KOG0705|consen  446 ECFEIVSNTGQTWHFEATTYEERDAWVQAIQSQILAS  482 (749)
T ss_pred             ceEEEeccccchhhhhhcchhhHHHHHHHHHHHHHHH
Confidence            499999864 779999999999999999999765433

>PF15408 PH_7: Pleckstrin homology domain

Probab=96.73  E-value=0.00079  Score=48.11  Aligned_cols=90  Identities=18%  Similarity=0.268  Sum_probs=56.9

Q ss_pred             EeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEee--cchhhhc--C-CCcEEEEEeCC-ceEE
Q psy7933          49 KGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYS--EDQQAMV--R-VPFSFSVVTKH-GGYL  122 (171)
Q Consensus        49 ~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~--~~~~~~~--~-r~~~F~I~t~~-rt~~  122 (171)
                      +|||....  ...-+|||.||++-.+.+|.++.. ....++.|+...+...  +-.+...  + .-|.|-.+.++ +...
T Consensus         1 EGYLY~~E--~~si~rRF~~L~~K~~~~~~~KGG-~~L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~~~   77 (104)
T PF15408_consen    1 EGYLYRDE--DSSIQRRFVMLRSKQFNMYEDKGG-QYLCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSRRHVQ   77 (104)
T ss_pred             CCeEEEec--cchHHHHHHhhhhceeEEecccCC-ceeeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCcchhh
Confidence            58887533  347789999999999999987765 4455555553322211  0000000  1 12345556665 4467


Q ss_pred             EEeCCHHHHHHHHHHHHHH
Q psy7933         123 MQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~  141 (171)
                      +-|+|.+.|+.||++++.-
T Consensus        78 ~FA~S~~~~~~Wi~~mN~~   96 (104)
T PF15408_consen   78 CFASSKKVCQSWIQVMNSP   96 (104)
T ss_pred             hhhhHHHHHHHHHHHhcCh
Confidence            7799999999999999864

>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain

Probab=96.60  E-value=0.016  Score=42.59  Aligned_cols=92  Identities=10%  Similarity=0.207  Sum_probs=53.4

Q ss_pred             eeEEeEEEeeeCCCCCce-EEEEEEeC--CcEEEecCCCCCccceEEECCCeEEEe-ecch---hh---h----cCCCcE
Q psy7933          46 VSRKGYLNILEQKTNGWK-KRWVAVRR--PYVFIFRDEKDPVERALVNLATAQVEY-SEDQ---QA---M----VRVPFS  111 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~Wk-rRWFVL~~--~~L~yYk~~~d~~~~g~I~L~~~~V~~-~~~~---~~---~----~~r~~~  111 (171)
                      .+++|-.+.+-.. +.++ +|.|.|..  .+|+|.. ... ...+.|+|..+.-.. ....   ..   .    .-...+
T Consensus         5 ~L~~G~~~~K~~~-~~~~~~~~f~ld~~~~~l~W~~-~~~-~~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~   81 (115)
T cd01248           5 ALQRGSVFIKWDD-TSRERRRLFRLDEKGFFLYWKD-EGK-KEKKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERC   81 (115)
T ss_pred             HHhCCCEEEEEcC-CCceeeEEEEEcCCCcEEEEeC-CCC-ccccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccE
Confidence            3455655444333 4564 56688863  4455544 332 145567776542111 1100   00   0    123578


Q ss_pred             EEEEeCC----ceEEEEeCCHHHHHHHHHHHHH
Q psy7933         112 FSVVTKH----GGYLMQTAGAREVHEWLYAINP  140 (171)
Q Consensus       112 F~I~t~~----rt~~f~A~s~~E~~~WI~aI~~  140 (171)
                      |.|+-..    ++..|.|+|.++++.|+..|..
T Consensus        82 fTIiy~~~~~~k~L~lVA~s~~~a~~W~~gL~~  114 (115)
T cd01248          82 FTIVYGTDLNLKSLDLVAPSEEEAKTWVSGLRK  114 (115)
T ss_pred             EEEEECCCCCeeEEEEEECCHHHHHHHHHHHhh
Confidence            9988643    4799999999999999999874

Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>KOG1170|consensus

Probab=96.27  E-value=0.00012  Score=69.64  Aligned_cols=99  Identities=19%  Similarity=0.267  Sum_probs=73.2

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCc-EEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEE
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPY-VFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQ  124 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~-L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~  124 (171)
                      +++.|...+.....-.|++|+|.+++.. ++|-+..... .--.+++....|......    .-++.|.|+|+-+...++
T Consensus         2 ~~~rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa~g~-~~~~~d~t~a~~~eSs~~----n~~~sf~vi~~~rk~r~~   76 (1099)
T KOG1170|consen    2 VVTRGLDNDVDNEREAWKQSILRAKDRMPEKVAKTASGP-LFALLDLTSAHVAESSTN----NPRPSFCVITPVRKHRLC   76 (1099)
T ss_pred             ccccccccccccHHHHHHHHHHHHHHHHHHHHHhccCCc-cHHHHhcccccccccccC----CCCCCeeEecccHHhhhh
Confidence            4567777777777779999999998875 5555655441 112345666666543322    356789999999999999


Q ss_pred             eCCHHHHHHHHHHHHHHhhhhhhcc
Q psy7933         125 TAGAREVHEWLYAINPLLAGQIRSK  149 (171)
Q Consensus       125 A~s~~E~~~WI~aI~~~~~~~~~~~  149 (171)
                      |++..||.+||.+++..+.+.+.+-
T Consensus        77 adn~ke~e~wi~~~kt~q~~e~~s~  101 (1099)
T KOG1170|consen   77 ADNRKEMEKWINQSKTPQHLEFISP  101 (1099)
T ss_pred             ccchhHHHHhhccccchhhccccCC
Confidence            9999999999999999887666544

>KOG0248|consensus

Probab=95.92  E-value=0.0028  Score=59.76  Aligned_cols=90  Identities=7%  Similarity=-0.213  Sum_probs=67.4

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECC-CeEEEeecchhhhcCCCcEEEEEeCCceEEEE
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLA-TAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQ  124 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~-~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~  124 (171)
                      ..+-|+|.|+....+.|++|||++.++.+.||+++-| ...+.+-+. ++.+......       -.-..++...++++-
T Consensus       259 ~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d-~~s~~~~~~~~~s~~fqli~-------~t~~~~~~~~s~~lt  330 (936)
T KOG0248|consen  259 TSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKID-IRSVTKLEQQGAAYAFQLIT-------STDKMNFMTESERTT  330 (936)
T ss_pred             hHHHHHHHhHheeeccceEEEEEcCCCccccccCccc-ccccceeeccchhHHhhhhh-------hceeEEEeccChhhh
Confidence            4678899999999999999999999999999999987 455555554 4444321111       122344556778999


Q ss_pred             eCCHHHHHHHHHHHHHHhh
Q psy7933         125 TAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       125 A~s~~E~~~WI~aI~~~~~  143 (171)
                      ++...-+++||++.+.+.-
T Consensus       331 ~dw~~iL~~~iKv~~~~~~  349 (936)
T KOG0248|consen  331 HDWVTILSAAIKATTLREM  349 (936)
T ss_pred             hhhHHHHHHHHHHHhccch
Confidence            9999999999999887643

>KOG3523|consensus

Probab=95.68  E-value=0.012  Score=54.84  Aligned_cols=80  Identities=14%  Similarity=0.288  Sum_probs=48.2

Q ss_pred             CceEEEEEEeCCcEEEecCCCC-------CccceEEECCCeEEEe-ecc-hhhhcCCCcEEEEEe----CC--ceEEEEe
Q psy7933          61 GWKKRWVAVRRPYVFIFRDEKD-------PVERALVNLATAQVEY-SED-QQAMVRVPFSFSVVT----KH--GGYLMQT  125 (171)
Q Consensus        61 ~WkrRWFVL~~~~L~yYk~~~d-------~~~~g~I~L~~~~V~~-~~~-~~~~~~r~~~F~I~t----~~--rt~~f~A  125 (171)
                      .-+.-|+.|-++.|.+-|....       ..+++.|.+..+.-+. .+. ......++|.|.+.-    .+  -.|.|+|
T Consensus       498 ~~~~vylfLFnD~Llitk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp~~~~~~~~~~hlF~ltLl~N~~~~~~e~lL~a  577 (695)
T KOG3523|consen  498 LSKTVYLFLFNDLLLITKKKSEGSFQVFDYAPRSLLQVEKCEPELKLPGGANSLSSRPHLFLLTLLSNHQGRQTELLLSA  577 (695)
T ss_pred             ccceeeeeeecceeeEeeecCCCceEEeeccchhhhhhhhcCcccCCCCCCcccccccceEEEehhhccCCCceeeeecC
Confidence            3445677788888888775532       2334444333322000 000 001235678998862    23  3499999


Q ss_pred             CCHHHHHHHHHHHHH
Q psy7933         126 AGAREVHEWLYAINP  140 (171)
Q Consensus       126 ~s~~E~~~WI~aI~~  140 (171)
                      +++.||..||.|+..
T Consensus       578 ~s~Sd~~RWi~Al~p  592 (695)
T KOG3523|consen  578 ESQSDRQRWISALRP  592 (695)
T ss_pred             CchHHHHHHHHhcCC
Confidence            999999999999985

>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A

Probab=95.58  E-value=0.06  Score=41.13  Aligned_cols=95  Identities=19%  Similarity=0.259  Sum_probs=45.0

Q ss_pred             eEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC------ccceEEECCCeEEEeecchh-----------------
Q psy7933          47 SRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP------VERALVNLATAQVEYSEDQQ-----------------  103 (171)
Q Consensus        47 ~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~------~~~g~I~L~~~~V~~~~~~~-----------------  103 (171)
                      +.+|=|.++++....|..=-+.|-+++|.+-|.....      .-+.-|+|.-..|+..++..                 
T Consensus         2 i~~G~L~Rk~~~~~~~~di~~~LFDh~Lll~K~k~~~k~e~ykV~r~PIPLeLL~l~~~~d~~~~~~~~~r~s~s~~~~~   81 (135)
T PF15405_consen    2 IYKGDLKRKGDNSFNWVDIHVYLFDHYLLLTKPKKVNKREQYKVYRRPIPLELLVLESMDDPPPQRSIAKRPSSSLISSS   81 (135)
T ss_dssp             ---------------S-EEEEEEESSEEEEEEEEEETTEEEEEESS--EEGGG-EEEE--TTTS---------S------
T ss_pred             ccccccccccccccccceeEEEeeccEEEEEEEEecCCeEEEEEEECCcCHHHeeeecccCCCcccCcccccccCccCCc
Confidence            5678888888888888888888888888887754211      12344666554444321110                 


Q ss_pred             ------------hhcCCCcEEEEEeCC---ceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         104 ------------AMVRVPFSFSVVTKH---GGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       104 ------------~~~~r~~~F~I~t~~---rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                                  ...+..|-|.+..-+   ..|.|.|+|..++++|+++|.+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q  134 (135)
T PF15405_consen   82 SSNSNSPSNPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ  134 (135)
T ss_dssp             -SHHHH--------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred             cCCCCccceeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence                        001233456665533   35799999999999999999875

>KOG2070|consensus

Probab=95.42  E-value=0.031  Score=51.21  Aligned_cols=76  Identities=12%  Similarity=0.158  Sum_probs=57.3

Q ss_pred             ceEEEEEEeCCcEEEecCCCCCc---cceEEECCCeEEEeecchhhhcCCCcEEEEEeCCce-EEEEeCCHHHHHHHHHH
Q psy7933          62 WKKRWVAVRRPYVFIFRDEKDPV---ERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYA  137 (171)
Q Consensus        62 WkrRWFVL~~~~L~yYk~~~d~~---~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt-~~f~A~s~~E~~~WI~a  137 (171)
                      =+.|||+|-.++|.++.-..+-.   -.|-+++++..|..-++.+   .-.+.|+|....-. ....+.++.++++|+++
T Consensus       325 ~~dRy~~LF~~~llflsvs~rMs~fIyegKlp~tG~iV~klEdte---~~~nafeis~~ti~rIv~~c~~~~~l~~wve~  401 (661)
T KOG2070|consen  325 EKDRYLLLFPNVLLFLSVSPRMSGFIYEGKLPTTGMIVTKLEDTE---NHRNAFEISGSTIERIVVSCNNQQDLQEWVEH  401 (661)
T ss_pred             hhhheeeeccceeeeeEeccccchhhhccccccceeEEeehhhhh---cccccccccccchhheeeccCChHHHHHHHHH
Confidence            34899999999988887544321   2456788888887766654   45688998766533 67789999999999999


Q ss_pred             HHH
Q psy7933         138 INP  140 (171)
Q Consensus       138 I~~  140 (171)
                      ++.
T Consensus       402 ln~  404 (661)
T KOG2070|consen  402 LNK  404 (661)
T ss_pred             hhh
Confidence            995

>KOG3549|consensus

Probab=95.38  E-value=0.048  Score=48.22  Aligned_cols=95  Identities=14%  Similarity=0.210  Sum_probs=68.1

Q ss_pred             CCceeEEeEEEeeeCCCC---CceEEEEEEeCCcEEEecCCCCCccceEEECCCeE-----------EEeecchhhhcCC
Q psy7933          43 SPVVSRKGYLNILEQKTN---GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQ-----------VEYSEDQQAMVRV  108 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~---~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~-----------V~~~~~~~~~~~r  108 (171)
                      +..++.-||..-.--..-   .++.||..|++..+|.|..+-    ..+.+...+.           |..+.+  -+-.|
T Consensus       278 ~~qivyMGWvne~~q~~~s~q~y~P~FLaLkG~~~y~F~tPP----v~t~dw~rAe~ty~vye~mfki~Kdsd--~~D~R  351 (505)
T KOG3549|consen  278 GEQIVYMGWVNEGVQNNISWQSYKPRFLALKGTEVYLFETPP----VNTADWSRAEVTYKVYETMFKIVKDSD--TVDSR  351 (505)
T ss_pred             cceEEEeeeccccccCcccccccCceeEEecCcEEEEEcCCC----cchhhhhhhhhhHHHHHHHHHHhcccc--ccccc
Confidence            566888899875432222   677899999999999998663    3333333222           222111  12368


Q ss_pred             CcEEEEEeC-CceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         109 PFSFSVVTK-HGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       109 ~~~F~I~t~-~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      ++||.|.+. +...||..+.+.|+-.|=++++.+..
T Consensus       352 ~~CF~~qs~~ge~~yfsVEl~seLa~wE~sfq~Atf  387 (505)
T KOG3549|consen  352 QHCFLLQSSGGEPRYFSVELRSELARWENSFQAATF  387 (505)
T ss_pred             cceEEEEcCCCCceEEEEehhhHHHHHHHHHhhHHh
Confidence            999999986 57799999999999999999998866

>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function

Probab=95.37  E-value=0.23  Score=36.93  Aligned_cols=36  Identities=22%  Similarity=0.367  Sum_probs=33.2

Q ss_pred             CCcEEEEEeCCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         108 VPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       108 r~~~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      ..+.|.|.|..+...|.|+|+.+.+.|++.|+..+.
T Consensus        69 ~~~yfgL~T~~G~vEfec~~~~~~k~W~~gI~~mL~  104 (110)
T PF08458_consen   69 ERRYFGLKTAQGVVEFECDSQREYKRWVQGIQHMLS  104 (110)
T ss_pred             eEEEEEEEecCcEEEEEeCChhhHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999875

>KOG4807|consensus

Probab=95.31  E-value=0.00018  Score=63.92  Aligned_cols=77  Identities=18%  Similarity=0.355  Sum_probs=61.9

Q ss_pred             CceEEEEEEeCCcEEEecCCCC---CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEEeCCHHHHHHHHHH
Q psy7933          61 GWKKRWVAVRRPYVFIFRDEKD---PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYA  137 (171)
Q Consensus        61 ~WkrRWFVL~~~~L~yYk~~~d---~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~A~s~~E~~~WI~a  137 (171)
                      .|++-||||....+-||.+..-   ....|.|+|.+|+-....    ...+.+.|.|.|.+..|.|.|-+--=+..||.|
T Consensus        34 ~~~k~~~~~~~~~~~~~~d~~A~~~~~L~~~~~LR~C~~v~e~----a~q~nY~~~i~~~~~~~tL~~~~s~Ir~~~~~A  109 (593)
T KOG4807|consen   34 QWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTDVTEY----AVQRNYGFQIHTKDAVYTLSAMTSGIRRNWIEA  109 (593)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHhcccCCccccHHHHHHHHHH----HHHhccceeecccchhhhhHHHHHHHHHHHHHH
Confidence            8999999999999999987643   245688999888522111    124789999999999999999999999999999


Q ss_pred             HHHH
Q psy7933         138 INPL  141 (171)
Q Consensus       138 I~~~  141 (171)
                      +...
T Consensus       110 ~~kT  113 (593)
T KOG4807|consen  110 LRKT  113 (593)
T ss_pred             HHhc
Confidence            9853

>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain

Probab=94.98  E-value=0.2  Score=39.06  Aligned_cols=81  Identities=15%  Similarity=0.307  Sum_probs=56.0

Q ss_pred             EEEEEeCCcEEEecCCCCCc--c-----------------ceEEECCCeEEEeecchhhhcCCCcEEEEEe--------C
Q psy7933          65 RWVAVRRPYVFIFRDEKDPV--E-----------------RALVNLATAQVEYSEDQQAMVRVPFSFSVVT--------K  117 (171)
Q Consensus        65 RWFVL~~~~L~yYk~~~d~~--~-----------------~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t--------~  117 (171)
                      --||.+.--+++||+....+  .                 +..|++...+|......+  ..-.++++|++        +
T Consensus        52 ~~FVFK~AVVlv~ke~~K~KkKl~~~~r~~~~~e~dp~rfr~miP~~alQVR~~n~ad--~e~~~vwEliH~kSe~egRp  129 (160)
T cd01255          52 MCFVFKSAVVLVYKERLKQKKKLMGVSRKNATNEVDPFRFRVLIPVTALQVRASSAAD--MESNFLWELIHLKSELEGRP  129 (160)
T ss_pred             EEEEecceEEEEEcCcchhhhccccccccccccccCceeEEEeeceeeeeeecCCCcC--cccceEEEEEeecccccCCC
Confidence            56778777777887553211  1                 235666666665443322  23457888875        4


Q ss_pred             CceEEEEeCCHHHHHHHHHHHHHHhhhhhh
Q psy7933         118 HGGYLMQTAGAREVHEWLYAINPLLAGQIR  147 (171)
Q Consensus       118 ~rt~~f~A~s~~E~~~WI~aI~~~~~~~~~  147 (171)
                      .++|.|++.+.+-.+..|+.|+.++.+..|
T Consensus       130 E~vfqLCcS~~E~k~~flK~Irsilre~~r  159 (160)
T cd01255         130 EKVFVLCCSTAESRNAFLKTIRSILRESVR  159 (160)
T ss_pred             cceEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence            678999999999999999999998876543

TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.

>KOG4047|consensus

Probab=93.58  E-value=0.041  Score=49.58  Aligned_cols=100  Identities=11%  Similarity=0.004  Sum_probs=60.7

Q ss_pred             CceeEEeEEEeeeCCCC--CceEEEEEEeCCc------EEEecCCCCC-------ccceEEECCCeEEEeecchhhhcCC
Q psy7933          44 PVVSRKGYLNILEQKTN--GWKKRWVAVRRPY------VFIFRDEKDP-------VERALVNLATAQVEYSEDQQAMVRV  108 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~--~WkrRWFVL~~~~------L~yYk~~~d~-------~~~g~I~L~~~~V~~~~~~~~~~~r  108 (171)
                      ...+|+|++..+..+.+  .|.++|.+|...+      |.+|...+..       --+..+-|+++.-......+.....
T Consensus         6 ~~~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~~g~aRle~~~~~g~~~~~~~~~~~rR~~~ls~~~S~e~~~~~~~~~~   85 (429)
T KOG4047|consen    6 SCLVKDGVPDNHRNKFKVKNVRDDGAELGSGSMELTARLEILESRGRESVRWPYRCLRRYGYLSNLFSFESGRRCQTGPG   85 (429)
T ss_pred             CcccccCccchhhhhhccccccccceeeeccccccchhhhhhhccCCcccccchhcceeeEeeccceeeecccccccCCC
Confidence            45679999888777655  9999999998753      4444432211       1135566766532222211111112


Q ss_pred             CcEE-EEEeCCceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         109 PFSF-SVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       109 ~~~F-~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      .+.| ...+..   +|.|+++-+..+||++|........
T Consensus        86 i~~~f~~~a~e---~~~~~q~l~~~~w~~~i~~~~~~~~  121 (429)
T KOG4047|consen   86 ITAFFCDRAEE---LFNMLQDLMQANWINAIEEPAIPTR  121 (429)
T ss_pred             ceEEEecchHH---HHHHHHHHHhhhhhhhhhhcccccc
Confidence            3333 333333   7888889999999999998876533

>KOG4407|consensus

Probab=92.61  E-value=0.0076  Score=60.29  Aligned_cols=97  Identities=11%  Similarity=0.150  Sum_probs=68.1

Q ss_pred             CceeEEeEEEeee----------CCCCCceEEEEEEeCCcEEEecCCCCCc--------------cceEEECCCeEEEee
Q psy7933          44 PVVSRKGYLNILE----------QKTNGWKKRWVAVRRPYVFIFRDEKDPV--------------ERALVNLATAQVEYS   99 (171)
Q Consensus        44 ~~v~k~GwL~K~g----------~~~~~WkrRWFVL~~~~L~yYk~~~d~~--------------~~g~I~L~~~~V~~~   99 (171)
                      .+..|+|||+.+.          .....|+.-|.+|.++.|+.|++..+..              .--.+-|..|-+...
T Consensus       921 sd~~megWly~~q~~SkkGk~tGssLr~wk~~y~~l~ghsl~L~ss~re~~~~~aas~as~~~st~tts~c~nscltdI~ 1000 (1973)
T KOG4407|consen  921 SDSEMEGWLYVLQSSSKKGKATGSSLREWKLSYTGLHGHSLVLNSSAREHNSQSAASLASSSCSTATTSECLNSCLTDIQ 1000 (1973)
T ss_pred             hhhhhhcceeeeeecccCCcccCcchhhhhhHHHHhccccceecccccccCcchhhhhcccccccccCccccccchhhhh
Confidence            4567999997643          1122899999999999999999876521              111233333332211


Q ss_pred             cchhhhcCCCcEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         100 EDQQAMVRVPFSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       100 ~~~~~~~~r~~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      - .  ..++.++|.+.|.+ -.+.|+|++.++|-.|++.++....
T Consensus      1001 y-s--etkrn~vfRLTt~d~ce~lfqaeDrddmlgG~~ttq~St~ 1042 (1973)
T KOG4407|consen 1001 Y-S--ETKRNQVFRLTTNDLCEGLFQAEDRDDMLGGLSTTQSSTT 1042 (1973)
T ss_pred             h-h--hhhhhhHHHhHHHHHHhHhhccCccccccchhhhhhhccc
Confidence            1 1  12578999999988 6699999999999999998876543

>KOG1264|consensus

Probab=90.52  E-value=0.47  Score=46.21  Aligned_cols=57  Identities=18%  Similarity=0.264  Sum_probs=40.8

Q ss_pred             cceEEECCCeEEEeecchhhhcCCCcEEEEEe---CCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933          85 ERALVNLATAQVEYSEDQQAMVRVPFSFSVVT---KHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus        85 ~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t---~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .+|+.++..+.|...+.-.  -.+.++|.|..   ..-.|.|.|++.+|+.+|+++|+++.-
T Consensus       852 ~rgi~d~~~~nvv~~~q~~--n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~  911 (1267)
T KOG1264|consen  852 CRGILDLNTYNVVKAPQGK--NQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITW  911 (1267)
T ss_pred             hhccccccccceeeccccc--CCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHH
Confidence            4556666666555443211  24678898863   456699999999999999999999753

>KOG0517|consensus

Probab=87.29  E-value=0.026  Score=58.19  Aligned_cols=95  Identities=19%  Similarity=0.303  Sum_probs=65.4

Q ss_pred             eeEEeEEEeeeC--------CCCCceEEEEEEeCCcEEEecCCCCCcc------ceEEEC--CCeEEEeecchhhhcCCC
Q psy7933          46 VSRKGYLNILEQ--------KTNGWKKRWVAVRRPYVFIFRDEKDPVE------RALVNL--ATAQVEYSEDQQAMVRVP  109 (171)
Q Consensus        46 v~k~GwL~K~g~--------~~~~WkrRWFVL~~~~L~yYk~~~d~~~------~g~I~L--~~~~V~~~~~~~~~~~r~  109 (171)
                      ..++|+|+.+-.        ....|..-|+||+...|.+|++.+....      .|...|  ..+.|....   ...+++
T Consensus      2299 ~~~eG~L~Rk~~~~A~e~k~~nRsw~~vy~~i~e~el~fykD~k~~~a~ve~~~r~e~~lel~~a~i~~a~---dy~kkk 2375 (2473)
T KOG0517|consen 2299 RQLEGFLYRKHLLGALEIKASNRSWDNVYCRIREKELGFYKDAKKDLASVELLVRGEPPLELDMAAIEVAS---DYHKKK 2375 (2473)
T ss_pred             HHHHhHHHHHHHHhhhhhhhhcccHHHHHHHHHhccchhhcccCcccccchhhccCCcchhcchhHHHHHH---HHHHHh
Confidence            467888854421        1238999999999999999998875222      122222  122221111   234688


Q ss_pred             cEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         110 FSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       110 ~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      ++|.+..+. ..|.|+|.++++|+.|+.++....+
T Consensus      2376 ~v~~l~~~~gae~llq~k~ee~m~sWL~~~a~~~~ 2410 (2473)
T KOG0517|consen 2376 HVFLLQLPPGAEHLLQAKDEEEMESWLRALAVKRA 2410 (2473)
T ss_pred             HhhhhcCCchHHHHHhhccHHHHHHHHHHHHHHHH
Confidence            999999764 6699999999999999999988776

>KOG3531|consensus

Probab=86.59  E-value=0.44  Score=46.31  Aligned_cols=92  Identities=18%  Similarity=0.259  Sum_probs=65.5

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC----CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCce
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD----PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGG  120 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d----~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt  120 (171)
                      ..+.+|-|.|..  .+.=++|=|.|-.+.|.|-.+.-+    -...|.|++. .+++..++..   .-||||.|.+..++
T Consensus       749 E~ir~g~llK~s--kkgLqqrmfFLfsdillytsk~~~~~~~fri~g~lP~~-l~~en~en~~---s~p~~~ti~~~qk~  822 (1036)
T KOG3531|consen  749 EFIRSGCLLKLS--KKGLQQRMFFLFSDILLYTSKGPDVQKCFRINGDLPLT-LTMENSENEW---SVPHCFTISGAQKQ  822 (1036)
T ss_pred             hhhhcCCchhhc--cccchhhhhhhhhhhheeccCCCChhheeEeccCCceE-eeeecccccc---cCCceEEEeccceE
Confidence            355778887754  345677777777776655432212    1345667777 6666555432   57999999999999


Q ss_pred             EEEEeCCHHHHHHHHHHHHHHh
Q psy7933         121 YLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       121 ~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      .+.+|.+..+++.|...++..+
T Consensus       823 i~vsast~~~sk~~~~~r~~~i  844 (1036)
T KOG3531|consen  823 IYVSASTRRESKKWEFDRRKAI  844 (1036)
T ss_pred             EEEeccchhhhhhhhhccchhh
Confidence            9999999999999999777766

>KOG0592|consensus

Probab=86.53  E-value=1.7  Score=40.57  Aligned_cols=85  Identities=16%  Similarity=0.273  Sum_probs=59.7

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeC-CcEEEecCCCCCccceEEECCCe-EEEeecchhhhcCCCcEEEEEeCCceEE
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRR-PYVFIFRDEKDPVERALVNLATA-QVEYSEDQQAMVRVPFSFSVVTKHGGYL  122 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~-~~L~yYk~~~d~~~~g~I~L~~~-~V~~~~~~~~~~~r~~~F~I~t~~rt~~  122 (171)
                      .+.|.|+|.|+.+.  -=+||.|+|.+ +.|+|+. +......|.|+++.. .++.        .....|.|.|++++|+
T Consensus       450 ~i~k~~~l~k~~~l--f~rkr~lllTn~~rll~~~-~~~~~lk~eip~~~~~~~e~--------~n~~~~~i~TP~k~~~  518 (604)
T KOG0592|consen  450 LILKEGALEKRQGL--FARKRMLLLTNGPRLLYVD-PQNLVLKGEIPWSPDLRVEL--------KNSSTFFIHTPNKVYY  518 (604)
T ss_pred             hHHhHHHHHhhhhh--hhceeEEEecCCCeEEEEe-cccceeccccccCcccceee--------ccCcceEEECCcccee
Confidence            45678888776422  34568899976 4566665 444467788888753 3332        3457899999999998


Q ss_pred             EEeCCHHHHHHHHHHHHHH
Q psy7933         123 MQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~  141 (171)
                      |.- -+.....|.++|..+
T Consensus       519 l~d-~~~~as~w~~ai~~~  536 (604)
T KOG0592|consen  519 LED-PEQRASVWCKAIETV  536 (604)
T ss_pred             ccC-cccchhHHHHhhhhh
Confidence            865 455677899999997

>KOG3551|consensus

Probab=85.11  E-value=0.72  Score=41.43  Aligned_cols=99  Identities=16%  Similarity=0.237  Sum_probs=65.6

Q ss_pred             CceeEEeEEEeeeCC--CCCceEEEEEEeCCcEEEecCCCCC-----ccceEEECCCeEEEe-ecchhh-hcCCCcEEEE
Q psy7933          44 PVVSRKGYLNILEQK--TNGWKKRWVAVRRPYVFIFRDEKDP-----VERALVNLATAQVEY-SEDQQA-MVRVPFSFSV  114 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~--~~~WkrRWFVL~~~~L~yYk~~~d~-----~~~g~I~L~~~~V~~-~~~~~~-~~~r~~~F~I  114 (171)
                      ..+-.=|||.++-..  ...|+.-+++|...-|.+|.+--..     .|..+.+|-.-.++. .+.... ..+-...|.+
T Consensus       290 ~evkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~  369 (506)
T KOG3551|consen  290 SEVKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGSGKGSVIKGLTLSFAT  369 (506)
T ss_pred             cchhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCCCCCCCcCCceEEEEE
Confidence            456677999887643  3489999999999888888865332     344555553322222 121110 0122357888


Q ss_pred             EeCC----ceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         115 VTKH----GGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       115 ~t~~----rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      -|.+    ++|.|.+++..||-.|...|=+..
T Consensus       370 RtGTrqGV~thlfrvEThrdLa~WtRslVqGc  401 (506)
T KOG3551|consen  370 RTGTRQGVETHLFRVETHRELAAWTRSLVQGC  401 (506)
T ss_pred             ecccccceEEEEEEeccHHHHHHHHHHHHHHH
Confidence            8754    569999999999999999886654

>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4)

Probab=84.24  E-value=0.26  Score=42.76  Aligned_cols=29  Identities=24%  Similarity=0.626  Sum_probs=21.6

Q ss_pred             CCceeEEeEEEeeeCC-----CCCceEEEEEEeC
Q psy7933          43 SPVVSRKGYLNILEQK-----TNGWKKRWVAVRR   71 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~-----~~~WkrRWFVL~~   71 (171)
                      .+.++|+|.|.|+...     .++||||||.|.+
T Consensus       277 ~~~~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt~  310 (310)
T cd05134         277 QPILLKEGFMIKRAQGRKRFGMKNFKKRWFRLTN  310 (310)
T ss_pred             CcchhhhhhHHHhcccCCcccccchhheeeecCC
Confidence            4578999999985422     1379999999863

Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.

>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL

Probab=83.54  E-value=0.2  Score=43.50  Aligned_cols=28  Identities=29%  Similarity=0.545  Sum_probs=22.0

Q ss_pred             CCceeEEeEEEeeeCCC-----CCceEEEEEEe
Q psy7933          43 SPVVSRKGYLNILEQKT-----NGWKKRWVAVR   70 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~-----~~WkrRWFVL~   70 (171)
                      .+.++|+|+|.|+....     +.||||||.|.
T Consensus       280 ~~~~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~  312 (313)
T cd05394         280 EPVHLKEGEMYKRAQGRTRIGKKNFKKRWFCLT  312 (313)
T ss_pred             CchhhHHHHHHhhccCCCccccccchhheeecC
Confidence            35678999999987332     38999999985

In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.

>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1

Probab=83.08  E-value=0.27  Score=42.68  Aligned_cols=28  Identities=29%  Similarity=0.552  Sum_probs=21.6

Q ss_pred             CCceeEEeEEEeeeCCC-----CCceEEEEEEe
Q psy7933          43 SPVVSRKGYLNILEQKT-----NGWKKRWVAVR   70 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~-----~~WkrRWFVL~   70 (171)
                      ...++|+|++.|+....     +.||||||.|.
T Consensus       283 ~~~~~k~g~~~~~~~~~~~~~~~~~k~r~~~lt  315 (315)
T cd05128         283 EPVVLKEGFMIKRAQGRGRLGRKNFKKRYFRLT  315 (315)
T ss_pred             CchhhhhhhhHhhcccCCCccccchhheeeecC
Confidence            46789999998876322     38999999983

The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.

>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT)

Probab=82.64  E-value=16  Score=29.24  Aligned_cols=86  Identities=14%  Similarity=0.135  Sum_probs=60.4

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEec-----CCCCCccceEEECCCeE-EEeecchhhhcCCCcEEEEEe
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFR-----DEKDPVERALVNLATAQ-VEYSEDQQAMVRVPFSFSVVT  116 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk-----~~~d~~~~g~I~L~~~~-V~~~~~~~~~~~r~~~F~I~t  116 (171)
                      ...++....+.|-.. ...=.+|.++|.+..+|...     +......+..|+|..+. |..++..      ...|.|..
T Consensus        47 ~e~vlFs~~v~K~nr-~~K~~~R~livT~~~iY~l~~~~~~~~~~~~~kr~i~l~~I~~IsvS~~~------D~~~vihv  119 (199)
T PF06017_consen   47 DEKVLFSDRVQKYNR-RNKPQPRILIVTDKAIYLLDQRKVKDPKKYKLKRRIPLSDITGISVSPLS------DNFFVIHV  119 (199)
T ss_pred             CcceEEEEEEEEecC-CCCccceEEEEeCCeEEEEEEeecCCceeeEEEeccCcccccEEEEccCC------CCEEEEEE
Confidence            347888888888775 44567899999999999996     55555677888887663 3333322      24566665


Q ss_pred             -CCceEEEEeCCHHHHHHHH
Q psy7933         117 -KHGGYLMQTAGAREVHEWL  135 (171)
Q Consensus       117 -~~rt~~f~A~s~~E~~~WI  135 (171)
                       ....+.|+++...|+-.=|
T Consensus       120 ~~~~D~il~~~~k~Elv~~L  139 (199)
T PF06017_consen  120 PGEGDLILESDFKTELVTIL  139 (199)
T ss_pred             CCCCCEEEEeCcHHHHHHHH
Confidence             4577999999986665433

Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	171
2da0_A	114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	8e-12
1pls_A	113	Pleckstrin homology domain; phosphorylation; NMR {	9e-11
1eaz_A	125	Tandem PH domain containing protein-1; lipid-bindi	2e-10
2j59_M	168	RHO-GTPase activating protein 10; ARF, ARF1, ARFBD	2e-10
1x1f_A	149	Signal-transducing adaptor protein 1; docking prot	8e-10
2cod_A	115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	8e-10
1wgq_A	109	FYVE, rhogef and PH domain containing 6; ethanol d	1e-09
2dn6_A	115	KIAA0640 protein; PH domain, structural genomics,	2e-09
1v89_A	118	Hypothetical protein KIAA0053; pleckstrin homology	3e-09
2d9v_A	130	Pleckstrin homology domain-containing protein fami	4e-09
2rsg_A	94	Collagen type IV alpha-3-binding protein; pleckstr	4e-09
1u5e_A	211	SRC-associated adaptor protein; novel dimerization	4e-09
1fao_A	126	Dual adaptor of phosphotyrosine and 3- phosphoinos	5e-09
1dro_A	122	Beta-spectrin; cytoskeleton; NMR {Drosophila melan	7e-09
2dkp_A	128	Pleckstrin homology domain-containing family A mem	1e-08
2p0d_A	129	RHO GTPase-activating protein 9; protein-phosphoin	1e-08
3pp2_A	124	RHO GTPase-activating protein 27; PH domain, GTPas	3e-08
1u5d_A	108	SKAP55, SRC kinase-associated phosphoprotein of 55	3e-08
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	4e-08
1wi1_A	126	Calcium-dependent activator protein for secretion,	5e-08
3cxb_B	112	Pleckstrin homology domain-containing family M mem	6e-08
2cof_A	107	Protein KIAA1914; PH domain, structural genomics,	9e-08
2d9y_A	117	Pleckstrin homology domain-containing protein fami	1e-07
1x05_A	129	Pleckstrin; PH domain, structural genomics, NPPSFA	1e-07
2yry_A	122	Pleckstrin homology domain-containing family A mem	2e-07
1u5f_A	148	SRC-associated adaptor protein; PH domain of SKAP-	3e-07
2i5f_A	109	Pleckstrin; PH domain, protein-inositol phosphate	3e-07
3a8p_A	263	T-lymphoma invasion and metastasis-inducing protei	3e-07
1wjm_A	123	Beta-spectrin III; PH domain, signal transduction,	4e-07
1x1g_A	129	Pleckstrin 2; PH domain, structural genomics, rike	6e-07
1upq_A	123	PEPP1; PH domain, phosphoinositide binding, signal	8e-07
1fgy_A	127	GRP1; PH domain, signaling protein; HET: 4IP; 1.50	9e-07
1btn_A	106	Beta-spectrin; signal transduction protein; HET: I	1e-06
2dhk_A	119	TBC1 domain family member 2; PH domain, paris-1, s	1e-06
1v5u_A	117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	1e-06
3aj4_A	112	Pleckstrin homology domain-containing family B ME;	2e-06
3a8n_A	279	TIAM-1, T-lymphoma invasion and metastasis-inducin	2e-06
1v5p_A	126	Pleckstrin homology domain-containing, family A; T	3e-06
2y7b_A	134	Actin-binding protein anillin; cell cycle; 1.90A {	3e-06
2d9x_A	120	Oxysterol binding protein-related protein 11; PH d	6e-06
1qqg_A	264	IRS-1, insulin receptor substrate 1; beta-sandwhic	6e-06
3rcp_A	103	Pleckstrin homology domain-containing family A ME;	9e-06
3hk0_A	256	Growth factor receptor-bound protein 10; GRB10, RA	2e-05
2q13_A	385	DCC-interacting protein 13 alpha; APPL1, BAR domai	3e-05
3lju_X	386	ARF-GAP with dual PH domain-containing protein 1;	4e-05
2lul_A	164	Tyrosine-protein kinase TEC; structural genomics,	4e-05
2ys3_A	137	UNC-112-related protein 2; PH domain, kindlin-3, s	1e-04
1unq_A	125	RAC-alpha serine/threonine kinase; transferase, pl	2e-04
1dyn_A	125	Dynamin; signal transduction protein; 2.20A {Homo	2e-04
2coc_A	112	FYVE, rhogef and PH domain containing protein 3; s	3e-04
2dtc_A	126	RAL guanine nucleotide exchange factor ralgps1A; P	4e-04
4a6h_A	120	Phosphatidylinositol 4,5-bisphosphate-binding Pro	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 57.9 bits (140), Expect = 8e-12
 Identities = 19/95 (20%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 46  VSRKGYLNIL-EQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQA 104
             +KGYL    +     W++R  +V+   + I     +  + A +NL T QV+ + +   
Sbjct: 10  SEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSNR-QPAKLNLLTCQVKPNAED-- 66

Query: 105 MVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
                 SF +++ +  Y  Q    ++   W+  + 
Sbjct: 67  ----KKSFDLISHNRTYHFQAEDEQDYVAWISVLT 97

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 113

 Score = 55.4 bits (134), Expect = 9e-11
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 3/99 (3%)

Query: 42  ISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSED 101
           + P   R+GYL       N WK  WV +    +  ++ + D   + ++ L  + +     
Sbjct: 1   MEPKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQ 60

Query: 102 QQAMVRVPFSFSVVT-KHGGYLMQTAGAREVHEWLYAIN 139
                +  F F + T K   +  Q A   E   W+  IN
Sbjct: 61  DFG--KRMFVFKITTTKQQDHFFQAAFLEERDAWVRDIN 97

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 Length = 125

 Score = 54.4 bits (131), Expect = 2e-10
 Identities = 22/116 (18%), Positives = 47/116 (40%), Gaps = 3/116 (2%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATA-QVEYSED 101
              V + GY          WK+R+  +    +  F+ E +     ++ L    +V+  + 
Sbjct: 11  DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQ 70

Query: 102 QQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQI-RSKTSRRQPP 156
              M+R    F +VT    + +Q     E+H W+ A++  +  Q    +++  + P
Sbjct: 71  SDIMMR-DNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQRGPGRSASSEHP 125

>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A Length = 168

 Score = 55.6 bits (133), Expect = 2e-10
 Identities = 16/140 (11%), Positives = 47/140 (33%), Gaps = 17/140 (12%)

Query: 46  VSRKGYLNILEQKTNG----------WKKRWVAVRRPYVFIFRDEKDPVER----ALVNL 91
            +++G+L+     T+           WK+ +V +R   +++++D+++          +++
Sbjct: 3   AAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISV 62

Query: 92  ATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTS 151
               ++ S  +    +    F + T     L Q     ++  W+  I             
Sbjct: 63  NACLIDISYSET---KRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSNLNEEDTGV 119

Query: 152 RRQPPASPALGPSSTQCLPQ 171
             +   S  +   +      
Sbjct: 120 TNRDLISRRIKEYNNLMSKA 139

>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 149

 Score = 53.6 bits (128), Expect = 8e-10
 Identities = 14/96 (14%), Positives = 35/96 (36%), Gaps = 2/96 (2%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQ 102
           +  +  +G+L I       ++  W  +R   +F + D+K  +    +++        ++ 
Sbjct: 15  ALPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNS 74

Query: 103 QAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAI 138
               +    F++V       ++T       EW   I
Sbjct: 75  TE--KNCAKFTLVLPKEEVQLKTENTESGEEWRGFI 108

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 115

 Score = 52.8 bits (127), Expect = 8e-10
 Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 8/117 (6%)

Query: 43  SPVVSRKGYLNIL-EQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSED 101
           S    + G+L+ L  Q    ++KRWV      +  + +EK+   + ++ L+       + 
Sbjct: 5   SSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG 64

Query: 102 QQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPAS 158
                     F VVT    ++ +     E ++W+  +   L  Q  +  S+   P+S
Sbjct: 65  -------DNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKSQSLTSQSQASGPSS 114

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 109

 Score = 52.0 bits (125), Expect = 1e-09
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 4/95 (4%)

Query: 46  VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAM 105
            +  GYL   +     WK  W  ++   ++ +   +D        L    V   +D+ + 
Sbjct: 8   STMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSE 67

Query: 106 VRVPFSFSVVT-KHGGYLMQTAGAREVHEWLYAIN 139
                 F ++      Y+ +   A     W+ A  
Sbjct: 68  ---SKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQ 99

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 51.6 bits (124), Expect = 2e-09
 Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 4/98 (4%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATA-QVEYSED 101
           S  V ++GY+     +   W +RW  ++   +  +  E    ++  + L     VE   D
Sbjct: 5   SSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPD 64

Query: 102 QQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
           +         F V      + +  +  ++  EW+ AI+
Sbjct: 65  KD---GKKCLFLVKCFDKTFEISASDKKKKQEWIQAIH 99

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 118

 Score = 51.3 bits (123), Expect = 3e-09
 Identities = 16/120 (13%), Positives = 42/120 (35%), Gaps = 18/120 (15%)

Query: 46  VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAM 105
             + G+L         W++R+  +R   ++ ++DE+D   +  + L    ++        
Sbjct: 8   PIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEE 67

Query: 106 VRVPFSFSVVTKHGG--------YLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPA 157
               F F ++             Y++  +   E+ EW+  +          + +   P +
Sbjct: 68  AG-KFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLR---------RVAGSGPSS 117

>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus} Length = 130

 Score = 51.5 bits (123), Expect = 4e-09
 Identities = 17/125 (13%), Positives = 41/125 (32%), Gaps = 9/125 (7%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIF---RDEKDPVERALVNLATAQVEYS 99
           S  + R G+L         WK+ W A+       +      +D  +R +++     ++  
Sbjct: 5   SSGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVG 64

Query: 100 EDQQAMV-----RVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAINPLLAGQIRSKTSRR 153
           ++ Q +            +V  + G    +      +   W  A+    +    +  +  
Sbjct: 65  QECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANSTPAPAGATVP 124

Query: 154 QPPAS 158
             P+S
Sbjct: 125 SGPSS 129

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} Length = 94

 Score = 50.5 bits (121), Expect = 4e-09
 Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 8/96 (8%)

Query: 46  VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVE--RALVNLATAQVEYSEDQQ 103
           V R G L+      +GW+ RWV ++   +  ++ E +     R  + L+ A +   +   
Sbjct: 1   VERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPHDFD- 59

Query: 104 AMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
                   F +      + ++        +W+ AI 
Sbjct: 60  -----ECRFDISVNDSVWYLRAQDPDHRQQWIDAIE 90

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A Length = 211

 Score = 52.4 bits (125), Expect = 4e-09
 Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 6/145 (4%)

Query: 3   SPDKTARSLFEDSRGRPDSNEATQDTSVILYVPEIEEIRISPVVSRKGYLNILEQK---- 58
             D  A      S      ++     S     P I    +  V+ + GYL    +     
Sbjct: 64  YDDPFAGPADTISLASERYDKDDDGPSDGNQFPPIAAQDLPFVI-KAGYLEKRRKDHSFL 122

Query: 59  TNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH 118
              W+KRW A+ +   + +  +KD  ++    +    V  +   +   +    F +    
Sbjct: 123 GFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPD 182

Query: 119 G-GYLMQTAGAREVHEWLYAINPLL 142
              Y    A  ++  EW+  +  +L
Sbjct: 183 KRIYQFTAASPKDAEEWVQQLKFIL 207

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A Length = 126

 Score = 50.9 bits (122), Expect = 5e-09
 Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 5/112 (4%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQ-VEYSED 101
             + +++GYL         WK RW  + R  +  F+D+  P    +++L     V++   
Sbjct: 15  PSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYS 74

Query: 102 QQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRR 153
           Q+        F +V     + +      E  EW+  +   L+   +      
Sbjct: 75  QER----VNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQIRKQLNQGE 122

>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1 Length = 122

 Score = 50.3 bits (120), Expect = 7e-09
 Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 14/106 (13%)

Query: 45  VVSRKGYLNILEQKTN--GWKKRWVAVRRPYVFIFRDEKDPVE--------RALVNLATA 94
            V+RK   +   +K +   W K ++A +   +  ++D+K                +L  A
Sbjct: 13  YVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNA 72

Query: 95  QVEYSEDQQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
            +E + D     +      V   +G  +L+Q     E+ +W+ ++ 
Sbjct: 73  AIEIASDYT---KKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLK 115

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens} Length = 128

 Score = 49.8 bits (119), Expect = 1e-08
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 3/108 (2%)

Query: 46  VSRKGYLNIL-EQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQA 104
           V R+G+L          WKKRW  +    +F +RDEK+      + L + Q+     +  
Sbjct: 21  VVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIALLTSEDH 80

Query: 105 MVRVPFSFSVVT-KHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTS 151
           + R  ++F         Y   T   +E+  W+ A+      Q    +S
Sbjct: 81  INR-KYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTSGPSS 127

>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A* Length = 129

 Score = 49.9 bits (119), Expect = 1e-08
 Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 15/112 (13%)

Query: 43  SPVVSRKGYLNILEQKTNG------WKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQV 96
           S  V + G LN+ +    G      W   WV +    +  +R+       +    A ++ 
Sbjct: 9   SHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRP 68

Query: 97  EYSED-QQAMVRV-------PFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
           E S D + A +              + T  G  +L+Q+    E+  W  A+ 
Sbjct: 69  ESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALR 120

>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens} Length = 124

 Score = 49.1 bits (117), Expect = 3e-08
 Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 22/117 (18%)

Query: 43  SPVVSRKGYLN---ILE----QKTNGWKKRWVAVRRPYVFIFRDEKDPVE---------- 85
           +  + + G L+     +     +   W   W  +    +  F+D K              
Sbjct: 5   TKTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFS 64

Query: 86  --RALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
                V L  A + ++   ++         + ++ G  YL+Q      +  W  AI 
Sbjct: 65  TPEYTVELRGATLSWAPKDKS--SRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIA 119

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1 Length = 108

 Score = 48.6 bits (116), Expect = 3e-08
 Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 5/99 (5%)

Query: 46  VSRKGYLN----ILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSED 101
           V ++GYL           + W+KRW  V R   + + +EK    +    +    V  +  
Sbjct: 3   VIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPH 62

Query: 102 QQAMVRVPFSFSVVTKHG-GYLMQTAGAREVHEWLYAIN 139
            +   +    F + ++    Y        E  +W+  I+
Sbjct: 63  LRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQIS 101

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} Length = 228

 Score = 50.0 bits (119), Expect = 4e-08
 Identities = 14/127 (11%), Positives = 41/127 (32%), Gaps = 10/127 (7%)

Query: 46  VSRKGYL-----NILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSE 100
             ++G+L              WKKRW  +R+  +  F ++ +   +  V + +A+     
Sbjct: 58  ALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEEKLKGTVEVRSAKEIIDN 117

Query: 101 DQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPASPA 160
             +          ++     + +      +  +W   ++ + +   +         A+P 
Sbjct: 118 TNK-----ENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSSTDQEIREMHDEQANPQ 172

Query: 161 LGPSSTQ 167
               +  
Sbjct: 173 NAVGTLD 179

>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 126

 Score = 48.4 bits (115), Expect = 5e-08
 Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 6/118 (5%)

Query: 46  VSRKGYLNIL-EQKTNGWKKRWVAVRRP----YVFIFRDEKDPVERALVNLATAQVEYSE 100
           +   GYL  + +     WKKR+  + +     +      EK    + L+ L    V+Y++
Sbjct: 8   MKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTD 67

Query: 101 DQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPAS 158
            Q  +      F+ V +    +  +   ++   W+ A+     GQ        Q   S
Sbjct: 68  PQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYR-ATGQSHKPVPPTQSGPS 124

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B Length = 112

 Score = 47.9 bits (114), Expect = 6e-08
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 12/119 (10%)

Query: 47  SRKGYLN----ILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQ 102
           +++G L+            WK  +V +    ++ + D  D +    VN+   Q       
Sbjct: 1   TKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGGCRRA 60

Query: 103 QAMVRVPFSFSVVTK-HGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPASPA 160
               R P +F V+        +      E+ EW+  +   ++  +  +        +P+
Sbjct: 61  NTTDR-PHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSKGVIPQ------GVAPS 112

>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 107

 Score = 47.1 bits (112), Expect = 9e-08
 Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 8/95 (8%)

Query: 46  VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVE-RALVNLATAQVEYSEDQQA 104
           +    YLN+     + WK RW +VR  ++  ++D       +  ++L   +V        
Sbjct: 8   LETSSYLNV--LVNSQWKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCEVVPDPSPDH 65

Query: 105 MVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAI 138
                +SF ++ K      ++   + E+  WL  +
Sbjct: 66  ----LYSFRILHKGEELAKLEAKSSEEMGHWLGLL 96

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 117

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 3/99 (3%)

Query: 43  SPVVSRKGYLNIL-EQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSED 101
           +  V++ G+L          W KRW  +    +F ++DEK+      + L + +V   + 
Sbjct: 8   NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQP 67

Query: 102 QQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
              + R   +F         Y        E   W+ A+ 
Sbjct: 68  SDNISR-KHTFKAEHAGVRTYFFSAESPEEQEAWIQAMG 105

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A Length = 129

 Score = 47.1 bits (112), Expect = 1e-07
 Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 5/115 (4%)

Query: 42  ISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFI--FRDEKDPVERALVNLATAQVEYS 99
              V+ ++G L     +   WK R   +R    ++  +           ++L    V   
Sbjct: 14  FRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSV 73

Query: 100 EDQQAMVRV--PFSFSVVT-KHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTS 151
           E      +      F ++T     Y +Q A  +E  EW+ AI           +S
Sbjct: 74  ESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRTGKSGPSS 128

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 122

 Score = 46.7 bits (111), Expect = 2e-07
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 3/99 (3%)

Query: 43  SPVVSRKGYLNIL-EQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSED 101
           +  V++ G+L          W KRW  +    +F ++DEK+      + L + +V   + 
Sbjct: 19  NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQP 78

Query: 102 QQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
              + R   +F         Y        E   W+ A+ 
Sbjct: 79  SDNISR-KHTFKAEHAGVRTYFFSAESPEEQEAWIQAMG 116

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A Length = 148

 Score = 46.5 bits (110), Expect = 3e-07
 Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 5/101 (4%)

Query: 44  PVVSRKGYL----NILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYS 99
           P V + GYL             W+KRW A+ +   + +  +KD  ++    +    V  +
Sbjct: 15  PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMN 74

Query: 100 EDQQAMVRVPFSFSVVTKHG-GYLMQTAGAREVHEWLYAIN 139
              +   +    F +       Y    A  ++  EW+  + 
Sbjct: 75  NTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLK 115

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A Length = 109

 Score = 45.9 bits (109), Expect = 3e-07
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 5/102 (4%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFI--FRDEKDPVERALVNLATAQVEYSE 100
           + V+ ++G L     +   WK R   +R    ++  +           ++L    V   E
Sbjct: 4   TGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVE 63

Query: 101 DQQAMVRV--PFSFSVVT-KHGGYLMQTAGAREVHEWLYAIN 139
                 +      F ++T     Y +Q A  +E  EW+ AI 
Sbjct: 64  SNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQ 105

>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A Length = 263

 Score = 47.7 bits (112), Expect = 3e-07
 Identities = 21/145 (14%), Positives = 41/145 (28%), Gaps = 24/145 (16%)

Query: 46  VSRKGYLNILEQKTNG------------WKKRWVAVRRPYVFIFRDEKDP------VERA 87
           V + G+L      T              WK+ WV ++   +  +              R 
Sbjct: 11  VRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRC 70

Query: 88  LVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAINPLLAGQI 146
            +    + V+   +     +    F +    G  YL Q     ++  W+ AI+   A   
Sbjct: 71  ALFAEDSIVQSVPEHP---KKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIH--SACAS 125

Query: 147 RSKTSRRQPPASPALGPSSTQCLPQ 171
                  +      L   +   L +
Sbjct: 126 LFAKKHGKEDTVRLLKSQTRSLLQK 150

>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 123

 Score = 45.7 bits (108), Expect = 4e-07
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 12/104 (11%)

Query: 45  VVSRKGYLNILEQKTN--GWKKRWVAVRRPYVFIFRDEKDPVERA------LVNLATAQV 96
           ++ RK  +    +K     W+  +  +RR  +  ++D K             V+LA AQ 
Sbjct: 13  MLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQG 72

Query: 97  EYSEDQQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
             + D +   +    F +  + G  YL Q     E+  WL  +N
Sbjct: 73  SVAFDYR---KRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVN 113

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 129

 Score = 45.3 bits (107), Expect = 6e-07
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 9/109 (8%)

Query: 46  VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIF---RDEKDPVERALVNLATAQVEYSEDQ 102
           V ++GYL     K   WK R   +R+   F+      +++       +L  + V   ED 
Sbjct: 18  VVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDN 77

Query: 103 QAMVRV-----PFSFSVVT-KHGGYLMQTAGAREVHEWLYAINPLLAGQ 145
                V        F V+T     Y +Q +   E  EW+ AI  L +G 
Sbjct: 78  GVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTSGP 126

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A* Length = 123

 Score = 44.7 bits (106), Expect = 8e-07
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 3/112 (2%)

Query: 46  VSRKGYLNIL-EQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQA 104
           V  +G+L+         WK+RW  +    +F ++D ++      V L +  +        
Sbjct: 11  VHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAP 70

Query: 105 MVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQP 155
             R  F+F+        Y++      ++  WL A+      +       R P
Sbjct: 71  RGR-RFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASRAEGDDYGQPRSP 121

>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A* Length = 127

 Score = 45.0 bits (106), Expect = 9e-07
 Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 18/110 (16%)

Query: 48  RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQ----- 102
           R+G+L  L  +   WK+RW  +    ++ F    D   R ++ L    +    D      
Sbjct: 7   REGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVLDPRKPNC 66

Query: 103 -------------QAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
                        +A         V   H  Y +      E  EW+ +I 
Sbjct: 67  FELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIK 116

>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A Length = 106

 Score = 44.2 bits (104), Expect = 1e-06
 Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 12/104 (11%)

Query: 45  VVSRKGYLNILEQKTN--GWKKRWVAVRRPYVFIFRDEKDPVERA------LVNLATAQV 96
            ++RK       +K +   W   +  +    +  ++D K             V+L  A  
Sbjct: 4   FLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAIC 63

Query: 97  EYSEDQQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
           E + D +   +    F +    G  YL Q     E++ W+ AI+
Sbjct: 64  EVALDYK---KKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAIS 104

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 13/105 (12%)

Query: 61  GWKKRWVA--VRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH 118
           GWK RW     R+  ++  R  +D      ++L++A  +   D +        F + T  
Sbjct: 25  GWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCKADAE-----EGIFEIKTPS 79

Query: 119 GGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQP-PASPALG 162
               ++ A  + +  WL  +        R +     P P+ P+ G
Sbjct: 80  RVITLKAATKQAMLYWLQQLQ-----MKRWEFHNSPPAPSGPSSG 119

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 Length = 117

 Score = 44.0 bits (104), Expect = 1e-06
 Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 6/103 (5%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVR--RPYVFIFRDEKDPVERALVNLATA-QVEYS 99
           S   S +G L         WK RW  +   +  +  +    D   + +++LA    V   
Sbjct: 5   SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPG 64

Query: 100 EDQQAMVRVP---FSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
                  +       F V T    Y           +W+  I 
Sbjct: 65  TPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQ 107

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A Length = 112

 Score = 43.7 bits (103), Expect = 2e-06
 Identities = 14/106 (13%), Positives = 30/106 (28%), Gaps = 9/106 (8%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRW-VAVRRPYVFIFRDEKDPVERALVNLATAQVEYSED 101
           S    + G+L         WKK W       ++  + D+        V++    +     
Sbjct: 2   SMAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTG 61

Query: 102 QQAMVRVP-------FSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
           Q+     P           +V + G    +      +   W + + 
Sbjct: 62  QECRDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQ 107

>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus} Length = 279

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 25/149 (16%)

Query: 42  ISPVVSRKGYLNI---LEQKTNG---------WKKRWVAVRRPYVFIFRDEK------DP 83
               V + G L +   L  K N          WK  WV+++   +F +  +       + 
Sbjct: 7   AQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNS 66

Query: 84  VERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAINPLL 142
           V +  V +  + V+   +     +  F F +    G  +L QT    E+  W+ AI+   
Sbjct: 67  VPKHAVWVENSIVQAVPEHP---KKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSAC 123

Query: 143 AGQIRSKTSRRQPPASPALGPSSTQCLPQ 171
           A  +     +     +  L  S  + L Q
Sbjct: 124 AAAVARHHHKED---TLRLLKSEIKKLEQ 149

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1 Length = 126

 Score = 43.4 bits (102), Expect = 3e-06
 Identities = 19/108 (17%), Positives = 45/108 (41%), Gaps = 12/108 (11%)

Query: 44  PVVSRK----GYLNILEQKTNG-WKKRWVA--VRRPYVFIFRDEKDPVERALVNLATAQV 96
           P V R+    G+L+I + + +G + +R+     +   +  + D    +      + + Q+
Sbjct: 9   PYVDRQNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQL 68

Query: 97  EYSED-----QQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
            Y         +   + PF F +      Y +Q    +++ +W+ A+N
Sbjct: 69  TYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALN 116

>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens} Length = 134

 Score = 43.5 bits (102), Expect = 3e-06
 Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 26/124 (20%)

Query: 42  ISPVVSRKGYLNILEQKTN--GWKKRWVAVRRPYVFIFR---DEKDPVERALVNLATAQV 96
           ++  V  +G+L I E  +    W +RW  +    +  +    DEK       +NLA    
Sbjct: 1   VNSSVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTS 60

Query: 97  -EYSEDQQAMVRVPFSFSVVTKHGG--------------------YLMQTAGAREVHEWL 135
            +     +       +F ++T                          +      E   W+
Sbjct: 61  RQIEPANREFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWM 120

Query: 136 YAIN 139
             +N
Sbjct: 121 QKLN 124

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 42.6 bits (100), Expect = 6e-06
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIF----RDEKDPVERALVNLATAQVEY 98
           S   +  GYL        GW+ R+  +      +        ++   R  + LA A +  
Sbjct: 5   SSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISP 64

Query: 99  SEDQQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPA 157
           S++         +F+V    G  Y ++   A+E   W+  +         +       P+
Sbjct: 65  SDED------SHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTEAIGKNNSGPS 118

Query: 158 S 158
           S
Sbjct: 119 S 119

>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A* Length = 264

 Score = 44.1 bits (103), Expect = 6e-06
 Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 13/132 (9%)

Query: 46  VSRKGYLNILEQKTNGWKKRWVAVRRP-------YVFIFRDEKDPVERALVNLATAQVE- 97
           V + GYL    +K     KR+  +R          +  + +EK    ++     +  +E 
Sbjct: 10  VRKVGYL----RKPKSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLES 65

Query: 98  -YSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPP 156
            ++ +++A  +     ++ T+   + +      E   W  A+  L               
Sbjct: 66  CFNINKRADSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRAKGHHDGAAALG 125

Query: 157 ASPALGPSSTQC 168
           A    G  S   
Sbjct: 126 AGGGGGSCSGSS 137

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A Length = 103

 Score = 41.7 bits (98), Expect = 9e-06
 Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 12/110 (10%)

Query: 49  KGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVE--RALVNLATAQVEYSEDQQAMV 106
           +G L        GW+ RW  +    +  +  + D  +  +  + +A  +++         
Sbjct: 2   EGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAVCEIKVHSAD---- 57

Query: 107 RVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQP 155
                  ++      + M+   A E   WL A+    + +     +R  P
Sbjct: 58  --NTRMELIIPGEQHFYMKAVNAAERQRWLVALG---SSKASLTDTRLVP 102

>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens} Length = 256

 Score = 42.5 bits (99), Expect = 2e-05
 Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 11/107 (10%)

Query: 50  GYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLAT---AQVEYSEDQQAMV 106
           G+L++ E     WKK +V +RR  ++          R L  LA    + +      +   
Sbjct: 136 GFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQY 195

Query: 107 RVPFSFSVVTKHGG--------YLMQTAGAREVHEWLYAINPLLAGQ 145
             P    +  K            L+     +    W+ A   L  G 
Sbjct: 196 NAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYGM 242

>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A Length = 385

 Score = 42.3 bits (98), Expect = 3e-05
 Identities = 9/83 (10%), Positives = 30/83 (36%), Gaps = 7/83 (8%)

Query: 59  TNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVT-- 116
           ++ W +++   +     + +   D      +++    V   + +       + F + +  
Sbjct: 294 SSTWDRQFYFTQGGN-LMSQARGDVAGGLAMDIDNCSVMAVDCEDR----RYCFQITSFD 348

Query: 117 KHGGYLMQTAGAREVHEWLYAIN 139
                ++Q    ++  EW+  IN
Sbjct: 349 GKKSSILQAESKKDHEEWICTIN 371

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C* Length = 386

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 10/115 (8%)

Query: 41  RISPVVSRKGYLNILEQK-TNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYS 99
           ++S    ++GY+     K T G++KRW  +    +  F+D  D   R  V + + +  Y+
Sbjct: 264 KLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYT 323

Query: 100 -----EDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYA----INPLLAGQ 145
                         P   ++VT    +L       +  EW+ A    ++  +  Q
Sbjct: 324 VLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPMLPQ 378

>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens} Length = 164

 Score = 40.9 bits (95), Expect = 4e-05
 Identities = 11/104 (10%), Positives = 33/104 (31%), Gaps = 9/104 (8%)

Query: 46  VSRKGYLNILEQKTNG-----WKKRWVAVRRPYVFIFRDEK-DPVERALVNLATAQ-VEY 98
              +  L    Q+        +K+R   + +  +  +         +  ++++  + VE 
Sbjct: 15  TILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEI 74

Query: 99  --SEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINP 140
             ++D     +  + F VV       +     +    W+  +  
Sbjct: 75  VKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKE 118

>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 137

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 15/117 (12%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 42  ISPVVSRKGYLNILEQKTN---GWKKRWVAVRRPYVFIFRDEKDPVE--RALVNLATAQV 96
            S +   K +L I   +     G+++ WV  +   +  ++ + +        +NL   +V
Sbjct: 5   SSGIPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKGCEV 64

Query: 97  EYSEDQQAMVRVPFSFSVVTKHGG--YLMQTAGAREVHEWLYAINPLLAGQIRSKTS 151
               +     +      V +  G     ++    ++   W+        G+  + +S
Sbjct: 65  VPDVNVSGQ-KFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLASKGRTMADSS 120

>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A Length = 125

 Score = 38.4 bits (89), Expect = 2e-04
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 5/99 (5%)

Query: 46  VSRKGYLNILEQKTNGWKKRWVAVRRPYVFI-FRDEKDPVERALVNLATAQVEYSEDQQA 104
           + ++G+L+   +    W+ R+  ++    FI +++    V++    L    V   +  + 
Sbjct: 8   IVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKT 67

Query: 105 MVRVPFSFSVVTKHG----GYLMQTAGAREVHEWLYAIN 139
               P +F +                   E  EW  AI 
Sbjct: 68  ERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQ 106

>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A Length = 125

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 16/102 (15%), Positives = 38/102 (37%), Gaps = 8/102 (7%)

Query: 46  VSRKGYLNILE--QKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQ 103
           V RKG+L I        G K+ W  +    +  ++D+++  ++ ++++   ++   E   
Sbjct: 12  VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGF 71

Query: 104 AMVRVPF------SFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
              +  F        +V   +    +      EV  W  +  
Sbjct: 72  MSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFL 113

>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1 Length = 112

 Score = 37.6 bits (87), Expect = 3e-04
 Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 5/93 (5%)

Query: 50  GYLNILEQKTNGWKKRWVAVRR--PYV-FIFRDEKDPVERALVNLATAQVEYSEDQQAMV 106
           G L + E     W + W A+    P V  +    +D      + L + ++    D +  +
Sbjct: 12  GPLRLSE-SGETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSV-PDPEERL 69

Query: 107 RVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
                + +      + +  + A    +WL  ++
Sbjct: 70  DSGHVWKLQWAKQSWYLSASSAELQQQWLETLS 102

>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus} Length = 126

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 22/126 (17%)

Query: 45  VVSRKGYLNILEQKTN-GWKKRWVAVRRPYVFIFRDEKDPVE---------RALVNLATA 94
            + RK  L    +     W + WV +    +  +  +                 V++   
Sbjct: 6   PLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGW 65

Query: 95  QVEYSEDQQAMVRVPFSFSVVTKHGG--YLMQTAGAREVHEWLYAINPLLAGQIRSKTSR 152
            V+  +D       P  F +     G  Y  QT        W   ++         K+SR
Sbjct: 66  MVQLPDD----PEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDA------CKSSR 115

Query: 153 RQPPAS 158
            Q PA+
Sbjct: 116 PQVPAN 121

>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A Length = 120

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 14/109 (12%), Positives = 33/109 (30%), Gaps = 15/109 (13%)

Query: 48  RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDE---KDPVERALVNLATAQVEYSEDQQA 104
           + G+L    +    + K +  +   ++  F+     KD V    + L+   V     + +
Sbjct: 8   KSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNS 67

Query: 105 MVRVP-----FSFSVVTKHGG-------YLMQTAGAREVHEWLYAINPL 141
                       F +  K  G       ++ +      +  W   +  L
Sbjct: 68  TSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKIL 116

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 37.9 bits (87), Expect = 9e-04
 Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 25/131 (19%)

Query: 20  DSNEATQDTSVILYVPEIEEIRISP-VVSRKGYL-NILEQKTNGWKKRWV--AVRRPYVF 75
           D  +       IL   EI+ I +S   VS    L   L  K     +++V   +R  Y F
Sbjct: 34  DCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF 93

Query: 76  I---FRDE-KDPVERALVNLATAQVEYSEDQQAMVRVPFSFS--VVTKHGGYLMQTAGAR 129
           +    + E + P        +     Y E +  +      F+   V++   YL       
Sbjct: 94  LMSPIKTEQRQP--------SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL------- 138

Query: 130 EVHEWLYAINP 140
           ++ + L  + P
Sbjct: 139 KLRQALLELRP 149

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	171
1wi1_A	126	Calcium-dependent activator protein for secretion,	99.96
1x1f_A	149	Signal-transducing adaptor protein 1; docking prot	99.95
1v88_A	130	Oxysterol binding protein-related protein 8; vesic	99.94
1u5d_A	108	SKAP55, SRC kinase-associated phosphoprotein of 55	99.94
1fao_A	126	Dual adaptor of phosphotyrosine and 3- phosphoinos	99.94
1wgq_A	109	FYVE, rhogef and PH domain containing 6; ethanol d	99.94
2rsg_A	94	Collagen type IV alpha-3-binding protein; pleckstr	99.94
1pls_A	113	Pleckstrin homology domain; phosphorylation; NMR {	99.94
2dkp_A	128	Pleckstrin homology domain-containing family A mem	99.94
2dhk_A	119	TBC1 domain family member 2; PH domain, paris-1, s	99.94
1v89_A	118	Hypothetical protein KIAA0053; pleckstrin homology	99.94
1upq_A	123	PEPP1; PH domain, phosphoinositide binding, signal	99.94
1eaz_A	125	Tandem PH domain containing protein-1; lipid-bindi	99.94
2dn6_A	115	KIAA0640 protein; PH domain, structural genomics,	99.94
1fgy_A	127	GRP1; PH domain, signaling protein; HET: 4IP; 1.50	99.94
2d9x_A	120	Oxysterol binding protein-related protein 11; PH d	99.94
2cod_A	115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	99.94
2d9v_A	130	Pleckstrin homology domain-containing protein fami	99.94
2i5f_A	109	Pleckstrin; PH domain, protein-inositol phosphate	99.93
2coc_A	112	FYVE, rhogef and PH domain containing protein 3; s	99.93
1x05_A	129	Pleckstrin; PH domain, structural genomics, NPPSFA	99.93
2p0d_A	129	RHO GTPase-activating protein 9; protein-phosphoin	99.93
1v5p_A	126	Pleckstrin homology domain-containing, family A; T	99.93
2d9y_A	117	Pleckstrin homology domain-containing protein fami	99.93
2yry_A	122	Pleckstrin homology domain-containing family A mem	99.93
3rcp_A	103	Pleckstrin homology domain-containing family A ME;	99.93
3cxb_B	112	Pleckstrin homology domain-containing family M mem	99.93
1wg7_A	150	Dedicator of cytokinesis protein 9; pleckstrin hom	99.93
1v5u_A	117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	99.93
3aj4_A	112	Pleckstrin homology domain-containing family B ME;	99.93
2da0_A	114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	99.93
1u5f_A	148	SRC-associated adaptor protein; PH domain of SKAP-	99.93
4a6h_A	120	Phosphatidylinositol 4,5-bisphosphate-binding Pro	99.92
1dyn_A	125	Dynamin; signal transduction protein; 2.20A {Homo	99.92
1wjm_A	123	Beta-spectrin III; PH domain, signal transduction,	99.92
1btk_A	169	Bruton'S tyrosine kinase; transferase, PH domain,	99.92
1x1g_A	129	Pleckstrin 2; PH domain, structural genomics, rike	99.92
2w2x_D	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.92
2cof_A	107	Protein KIAA1914; PH domain, structural genomics,	99.92
2lul_A	164	Tyrosine-protein kinase TEC; structural genomics,	99.92
2y7b_A	134	Actin-binding protein anillin; cell cycle; 1.90A {	99.92
1unq_A	125	RAC-alpha serine/threonine kinase; transferase, pl	99.92
1btn_A	106	Beta-spectrin; signal transduction protein; HET: I	99.91
1u5e_A	211	SRC-associated adaptor protein; novel dimerization	99.91
2j59_M	168	RHO-GTPase activating protein 10; ARF, ARF1, ARFBD	99.91
1dro_A	122	Beta-spectrin; cytoskeleton; NMR {Drosophila melan	99.91
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	99.9
2rlo_A	128	Centaurin-gamma 1; split PH domain, alternative sp	99.9
3pp2_A	124	RHO GTPase-activating protein 27; PH domain, GTPas	99.89
3a8p_A	263	T-lymphoma invasion and metastasis-inducing protei	99.89
2r09_A	347	Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph	99.88
1qqg_A	264	IRS-1, insulin receptor substrate 1; beta-sandwhic	99.88
3lju_X	386	ARF-GAP with dual PH domain-containing protein 1;	99.88
2q13_A	385	DCC-interacting protein 13 alpha; APPL1, BAR domai	99.87
2dtc_A	126	RAL guanine nucleotide exchange factor ralgps1A; P	99.86
4h8s_A	407	DCC-interacting protein 13-beta; BAR domain, pleck	99.86
3lju_X	386	ARF-GAP with dual PH domain-containing protein 1;	99.85
3tca_A	291	Amyloid beta A4 precursor protein-binding family 1	99.84
2fjl_A	150	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.81
2ys3_A	137	UNC-112-related protein 2; PH domain, kindlin-3, s	99.77
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.76
2rov_A	117	RHO-associated protein kinase 2; ATP-binding, coil	99.75
3a8n_A	279	TIAM-1, T-lymphoma invasion and metastasis-inducin	99.75
2d9w_A	127	Docking protein 2; PH domain, structural genomics,	99.74
3hk0_A	256	Growth factor receptor-bound protein 10; GRB10, RA	99.71
4gmv_A	281	RAS-associated and pleckstrin homology domains-CO	99.64
1w1g_A	151	HPDK1, 3-phosphoinositide dependent protein kinase	99.63
2coa_A	125	Protein kinase C, D2 type; protein kinase D2, PH d	99.59
2d9z_A	129	Protein kinase C, NU type; PH domain, structural g	99.54
4f7h_A	173	Fermitin family homolog 2; beta-barrel, membrane b	99.53
4bbk_A	165	Kindlin-1, fermitin family homolog 1; PH domain, c	99.49
1v5m_A	136	SH2 and PH domain-containing adapter protein APS;	99.09
1zc3_B	113	Exocyst complex protein EXO84; exocytosis, small G	98.97
3ml4_A	224	Protein DOK-7; tyrosine phosphorylation, adapter p	98.91
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	98.79
1v61_A	132	RAC/CDC42 guanine nucleotide exchange factor (GEF)	98.68
3mpx_A	434	FYVE, rhogef and PH domain-containing protein 5; s	98.65
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	98.48
1dbh_A	354	Protein (human SOS 1); guanine nucleotide exchange	98.44
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	98.37
3qwm_A	140	Iqsec1, IQ motif and SEC7 domain-containing protei	98.36
3t06_A	418	PDZ-rhogef, RHO guanine nucleotide exchange factor	98.35
2dfk_A	402	Collybistin II; DH domain, PH domain, cell cycle;	98.32
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	98.31
2lg1_A	185	A-kinase anchor protein 13; metal binding protein;	98.3
1kz7_A	353	Guanine nucleotide exchange factor DBS; guanine nu	98.26
3jzy_A	510	Intersectin 2; C2 domain, structural genomics cons	98.26
1mai_A	131	Phospholipase C delta-1; pleckstrin, inositol tris	98.23
1xcg_A	368	PDZ-rhogef, RHO guanine nucleotide exchange factor	98.2
1nty_A	311	Triple functional domain protein; DBL, pleckstrin,	98.17
3p6a_A	377	RHO guanine nucleotide exchange factor 1; regulati	98.16
2rgn_B	354	RHOA/RAC/CDC42 exchange factor; heterotrimeric G-p	98.11
1txd_A	385	RHO guanine nucleotide exchange factor 12; helical	98.09
3odw_A	536	RHO guanine nucleotide exchange factor 1; regulati	98.07
2z0q_A	346	XPLN, RHO guanine nucleotide exchange factor 3; DH	98.0
3ksy_A	1049	SOS-1, SON of sevenless homolog 1; RAS, RAS activa	97.78
1foe_A	377	T-lymphoma invasion and metastasis inducing protei	97.76
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	97.63
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	97.62
1fho_A	119	UNC-89; pleckstrin homology domain, electrostatics	96.96
1z87_A	263	Alpha-1-syntrophin; protein binding; NMR {Mus musc	96.75
2adz_A	178	Alpha-1-syntrophin; protein binding; NMR {Mus musc	95.95
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	92.39
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	90.89
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	90.07
3a98_B	203	Engulfment and cell motility protein 1; protein-pr	87.89
3ulb_A	121	Target of rapamycin complex 2 subunit AVO1; PH dom	87.56
3hie_A	171	Protein PSL1, exocyst complex component SEC3; PH d	84.04
3a58_A	320	Exocyst complex component SEC3; protein complex, P	83.86

>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.96  E-value=2.7e-28  Score=183.46  Aligned_cols=101  Identities=20%  Similarity=0.335  Sum_probs=88.3

Q ss_pred             CCceeEEeEEEeeeC-CCCCceEEEEEEeCCcEEEec----CCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC
Q psy7933          43 SPVVSRKGYLNILEQ-KTNGWKKRWVAVRRPYVFIFR----DEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK  117 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~-~~~~WkrRWFVL~~~~L~yYk----~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~  117 (171)
                      ..++.++|||.|+|+ ..+.||||||||+++.||||+    ++.+.++.|.|.|.+++|.+.+......+++|+|+|+++
T Consensus         5 p~n~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~   84 (126)
T 1wi1_A            5 SSGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKE   84 (126)
T ss_dssp             CCCEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECS
T ss_pred             CCCCceeEEEEEeCCCcccccceEEEEEeCCEEEEEEcccccccCCCCceEEECCCcEEEEecCCcccccCceEEEEecC
Confidence            357889999999998 457999999999999999999    888899999999999999864221223468899999999


Q ss_pred             CceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         118 HGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       118 ~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +++|+|+|+|++||++||+||..++.
T Consensus        85 ~~ty~~~Adseee~~~WikAi~~A~~  110 (126)
T 1wi1_A           85 GDTVIFASDDEQDRILWVQAMYRATG  110 (126)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEcCCHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999874

>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.95  E-value=2.2e-27  Score=182.82  Aligned_cols=97  Identities=14%  Similarity=0.244  Sum_probs=86.2

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEE
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQ  124 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~  124 (171)
                      .++|+|||.|+|+..+.||||||||+++.|+||+++.+..+.|.|+|.++.+..++...  ..+.++|+|.|++++|+|+
T Consensus        17 pv~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~~~~~~~~~~--~~~~~~F~I~t~~r~~~f~   94 (149)
T 1x1f_A           17 PLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNST--EKNCAKFTLVLPKEEVQLK   94 (149)
T ss_dssp             CEEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSCCEEEECCCT--TSCCCEEEEECSSCCEEEE
T ss_pred             CccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCCccccCcEEECCCceEEeeccCC--CCcCcEEEEEcCCCEEEEE
Confidence            48999999999999999999999999999999999999999999999988765332211  1357899999999999999


Q ss_pred             eCCHHHHHHHHHHHHHHhh
Q psy7933         125 TAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       125 A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|.+||++||+||+.++.
T Consensus        95 A~s~ee~~eWi~aI~~v~~  113 (149)
T 1x1f_A           95 TENTESGEEWRGFILTVTE  113 (149)
T ss_dssp             CSSHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHc
Confidence            9999999999999999876

>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.94  E-value=4.9e-27  Score=176.68  Aligned_cols=97  Identities=15%  Similarity=0.307  Sum_probs=84.4

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC----
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH----  118 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~----  118 (171)
                      +..++++|||.|++ ..+.|+||||||+++.|+||+++++..+.|.|+|.++.|...++    .+++|+|+|.++.    
T Consensus         5 ~~~v~k~GwL~K~g-~~k~WkrRWfVLk~~~L~yyk~~~~~~p~G~I~L~~~~v~~~~~----~~~~~~F~i~~~~~~~i   79 (130)
T 1v88_A            5 SSGIVMADWLKIRG-TLKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPS----KKDGFCFKLFHPLEQSI   79 (130)
T ss_dssp             SSSCCEEEEEEECC-SSSSCEEEEEEEETTEEEEESCSSSCCCCEEEECSSCEECCCCT----TTSSCEEEEECTTCCCC
T ss_pred             CCceEEEeEEEEeC-CCCCceEEEEEEECCEEEEECCCCCCCceEEEEcCCCEEEECCC----CCCCeEEEEEcCCcccc
Confidence            45788999999988 78899999999999999999999999999999999998854332    2467999999763    


Q ss_pred             --------------------ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         119 --------------------GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       119 --------------------rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                                          +.|+|+|+|++||++||+||+.++..
T Consensus        80 ~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~  125 (130)
T 1v88_A           80 WAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS  125 (130)
T ss_dssp             SCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred             ccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence                                34999999999999999999998853

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1

Probab=99.94  E-value=1.4e-26  Score=164.12  Aligned_cols=99  Identities=20%  Similarity=0.422  Sum_probs=86.9

Q ss_pred             ceeEEeEEEeeeCCC----CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-c
Q psy7933          45 VVSRKGYLNILEQKT----NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-G  119 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~----~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-r  119 (171)
                      .++++|||.|+++..    +.|++|||||+++.|+||+++.+..+.|.|+|.++.|...+......+++++|.|.+++ +
T Consensus         2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r   81 (108)
T 1u5d_A            2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRR   81 (108)
T ss_dssp             CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSC
T ss_pred             CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCCCCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCc
Confidence            688999999999653    79999999999999999999999999999999999887654322223578999999997 9


Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         120 GYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +|+|+|+|++|+++||.+|+.++.
T Consensus        82 ~~~l~a~s~~e~~~Wi~ai~~~i~  105 (108)
T 1u5d_A           82 TYEFTATSPAEARDWVDQISFLLK  105 (108)
T ss_dssp             CEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999875

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A

Probab=99.94  E-value=1.3e-26  Score=170.05  Aligned_cols=109  Identities=18%  Similarity=0.340  Sum_probs=88.5

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYL  122 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~  122 (171)
                      ...++++|||.|+++..+.|++|||||+++.|+||+++.+..+.|.|+|.++.+....+   ..+++++|.|.+++++|+
T Consensus        15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~---~~~~~~~F~i~~~~r~~~   91 (126)
T 1fao_A           15 PSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDY---SQERVNCFCLVFPFRTFY   91 (126)
T ss_dssp             CCTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEEC---SSSSSSEEEEEETTEEEE
T ss_pred             CCCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCCCCCceeEEEccceEEEEecc---cCCCCCEEEEEeCCcEEE
Confidence            34678999999999888899999999999999999999999999999999887433222   135789999999999999


Q ss_pred             EEeCCHHHHHHHHHHHHHHhhhhhhcccccCCC
Q psy7933         123 MQTAGAREVHEWLYAINPLLAGQIRSKTSRRQP  155 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~~~~~~~~~~~r~~  155 (171)
                      |+|+|++|+++||.+|+.++.. +..++..+.+
T Consensus        92 l~a~s~~e~~~Wi~al~~~i~~-~~~~~~~~~g  123 (126)
T 1fao_A           92 LCAKTGVEADEWIKILRWKLSQ-IRKQLNQGEG  123 (126)
T ss_dssp             EECSSHHHHHHHHHHHHHHHHT-C---------
T ss_pred             EECCCHHHHHHHHHHHHHHHHH-HHhcCccCCC
Confidence            9999999999999999999875 5555555443

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.94  E-value=3.2e-26  Score=164.33  Aligned_cols=97  Identities=16%  Similarity=0.297  Sum_probs=86.6

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ceEE
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GGYL  122 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt~~  122 (171)
                      ..++++|||.|+++..+.|+||||||+++.|+||+++.+..+.+.|+|.++.+....+.   ..++++|.|.+++ ++|+
T Consensus         6 ~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~---~~~~~~F~i~~~~~~~~~   82 (109)
T 1wgq_A            6 SGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDE---NSESKVFQLLHKGMVFYV   82 (109)
T ss_dssp             CSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCS---SCSSSEEEEEETTEEEEE
T ss_pred             CCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCcCccCceEECCCCEEEECCCC---CCCCcEEEEEeCCCeEEE
Confidence            46789999999998889999999999999999999999999999999999987765432   2467999999875 7899


Q ss_pred             EEeCCHHHHHHHHHHHHHHhh
Q psy7933         123 MQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|+|++||++||.+|+.+..
T Consensus        83 ~~a~s~~e~~~Wi~al~~a~~  103 (109)
T 1wgq_A           83 FKADDAHSTQRWIDAFQEGTV  103 (109)
T ss_dssp             EECSSHHHHHHHHHHHHHHHS
T ss_pred             EECCCHHHHHHHHHHHHHHhc
Confidence            999999999999999999875

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}

Probab=99.94  E-value=7.8e-27  Score=163.68  Aligned_cols=90  Identities=19%  Similarity=0.405  Sum_probs=81.0

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC--ccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEE
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP--VERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLM  123 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~--~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f  123 (171)
                      |.|+|||.|+|+..++|+||||||+++.|+||+++.+.  .+.|.|+|.++.+....      .++++|.|.+++++|+|
T Consensus         1 V~k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~~~~------~~~~~F~i~~~~r~~~l   74 (94)
T 2rsg_A            1 VERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPHD------FDECRFDISVNDSVWYL   74 (94)
T ss_dssp             CCEEEEEEEESSSTTCEEEEEEEEETTEEEEESSTTGGGTCCSEEEETTTCEEEECS------SCSSEEEEEETTEEEEE
T ss_pred             CCEEEEEEEeCCCCCCceEEEEEEECCEEEEEEecccccccceeeEecceeeeecCc------ccceeEEEEeCCeEEEE
Confidence            57999999999999999999999999999999988763  57899999998876533      35799999999999999


Q ss_pred             EeCCHHHHHHHHHHHHHH
Q psy7933         124 QTAGAREVHEWLYAINPL  141 (171)
Q Consensus       124 ~A~s~~E~~~WI~aI~~~  141 (171)
                      +|+|++||++||+||+++
T Consensus        75 ~A~s~~e~~~Wi~aLq~A   92 (94)
T 2rsg_A           75 RAQDPDHRQQWIDAIEQH   92 (94)
T ss_dssp             ECCSSCCTHHHHHHHHHH
T ss_pred             ECCCHHHHHHHHHHHHhh
Confidence            999999999999999975

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.94  E-value=3.2e-26  Score=165.04  Aligned_cols=98  Identities=21%  Similarity=0.374  Sum_probs=87.1

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ceEE
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GGYL  122 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt~~  122 (171)
                      +.++++|||.|+++..+.|+||||||+++.|+||+++.+..+.|.|+|.++.+......  ..+++|+|.|.+++ ++|+
T Consensus         3 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~--~~~~~~~F~i~~~~~r~~~   80 (113)
T 1pls_A            3 PKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQD--FGKRMFVFKITTTKQQDHF   80 (113)
T ss_dssp             CCCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSCCS--SCCSSSEEEEEETTTEEEE
T ss_pred             CCCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCCCCCcceEEEcCCCEEEEecCC--CCCCccEEEEEcCCCCEEE
Confidence            46889999999999889999999999999999999999999999999999887642111  23678999999986 8999


Q ss_pred             EEeCCHHHHHHHHHHHHHHhh
Q psy7933         123 MQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|+|++|+++||.+|+.++.
T Consensus        81 l~a~s~~e~~~Wi~ai~~~~~  101 (113)
T 1pls_A           81 FQAAFLEERDAWVRDINKAIK  101 (113)
T ss_dssp             EECSSHHHHHHHHHHHHHHHH
T ss_pred             EECCCHHHHHHHHHHHHHHHh
Confidence            999999999999999999886

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}

Probab=99.94  E-value=4.1e-26  Score=167.30  Aligned_cols=100  Identities=22%  Similarity=0.416  Sum_probs=87.9

Q ss_pred             CCceeEEeEEEeeeC-CCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ce
Q psy7933          43 SPVVSRKGYLNILEQ-KTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GG  120 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~-~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt  120 (171)
                      ...++++|||.|+++ ..+.|+||||||+++.|+||+++.+..+.|.|+|.++.|...+..+ ..+++|+|.|.+++ ++
T Consensus        18 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~-~~~~~~~F~i~~~~~r~   96 (128)
T 2dkp_A           18 NAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIALLTSED-HINRKYAFKAAHPNMRT   96 (128)
T ss_dssp             TSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCCSEEEEECGGGSEEEECCGGG-CCSSCSEEEEECSSSCC
T ss_pred             CCCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCCcccceEEEcCceEEEEcCCcc-cCCCCeEEEEEcCCCCE
Confidence            346789999999998 6789999999999999999999999999999999998887644322 23678999999985 99


Q ss_pred             EEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         121 YLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       121 ~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|+|++++|+++||++|+.+..
T Consensus        97 ~~l~a~s~~e~~~Wi~al~~a~~  119 (128)
T 2dkp_A           97 YYFCTDTGKEMELWMKAMLDAAL  119 (128)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHS
T ss_pred             EEEEcCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999875

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.94  E-value=3e-26  Score=167.96  Aligned_cols=100  Identities=19%  Similarity=0.255  Sum_probs=87.8

Q ss_pred             CceeEEeEEEeeeC--CCCCceEEEEEEeCC--cEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCc
Q psy7933          44 PVVSRKGYLNILEQ--KTNGWKKRWVAVRRP--YVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHG  119 (171)
Q Consensus        44 ~~v~k~GwL~K~g~--~~~~WkrRWFVL~~~--~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~r  119 (171)
                      ..++++|||.|+++  ..+.|+||||||+++  .|+||+++++..++|.|+|.++.+.....     .++++|.|.|++|
T Consensus         6 ~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~~~-----~~~~~F~i~~~~r   80 (119)
T 2dhk_A            6 SGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCKAD-----AEEGIFEIKTPSR   80 (119)
T ss_dssp             SCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEECTT-----GGGCEEEEECSSC
T ss_pred             CCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCcccccEEECCCCEEEecCC-----CCCCEEEEEeCCc
Confidence            46779999999997  567999999999998  99999999999999999999988765432     3579999999999


Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHhhhhhhc
Q psy7933         120 GYLMQTAGAREVHEWLYAINPLLAGQIRS  148 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~~~~~~~~~  148 (171)
                      +|+|+|++++||++||.+|+.++.....+
T Consensus        81 ~~~l~a~s~~e~~~Wi~al~~~~~~~~~~  109 (119)
T 2dhk_A           81 VITLKAATKQAMLYWLQQLQMKRWEFHNS  109 (119)
T ss_dssp             CEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEEECCCHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999988655443

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.94  E-value=5e-26  Score=163.90  Aligned_cols=99  Identities=15%  Similarity=0.391  Sum_probs=87.5

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEe-------
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVT-------  116 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t-------  116 (171)
                      ..++++|||.|+++..+.|++|||||+++.|+||+++.+..+.|.|+|.++.|....... ...++|+|.|.+       
T Consensus         6 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~-~~~~~~~f~i~~~~~~~~~   84 (118)
T 1v89_A            6 SGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNP-EEAGKFVFEIIPASWDQNR   84 (118)
T ss_dssp             SCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCCS-SCCCCCEEEEEESCCSSCC
T ss_pred             CCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcCc-ccCCcceEEEECCcccccc
Confidence            478899999999988889999999999999999999999999999999999876433211 125689999998       


Q ss_pred             -CCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         117 -KHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       117 -~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                       +.++|+|+|++++|+++||.+|+.++.
T Consensus        85 ~~~~~~~l~a~s~~e~~~Wi~al~~~~~  112 (118)
T 1v89_A           85 MGQDSYVLMASSQAEMEEWVKFLRRVAG  112 (118)
T ss_dssp             SSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence             779999999999999999999999885

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*

Probab=99.94  E-value=4.9e-26  Score=165.84  Aligned_cols=101  Identities=18%  Similarity=0.356  Sum_probs=87.6

Q ss_pred             CceeEEeEEEeeeC-CCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ceE
Q psy7933          44 PVVSRKGYLNILEQ-KTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GGY  121 (171)
Q Consensus        44 ~~v~k~GwL~K~g~-~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt~  121 (171)
                      ..++++|||.|+++ ..+.|++|||||+++.|+||+++.+..+.|.|+|.++.|...... ...+++|+|.|.+++ ++|
T Consensus         9 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~v~~~~~~-~~~~~~~~f~i~~~~~r~~   87 (123)
T 1upq_A            9 LPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPG-APRGRRFTFTAEHPGMRTY   87 (123)
T ss_dssp             SCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGGCEEEECCSS-CTTSSSSEEEEECTTSCCE
T ss_pred             CCceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCCCcccceEEECCCCEEEECCCC-ccCCCcEEEEEECCCCeEE
Confidence            45889999999995 678999999999999999999999999999999999988765321 123578999999986 999


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      +|+|+|++||++||.+|+.++...
T Consensus        88 ~l~a~s~~e~~~Wi~al~~a~~~~  111 (123)
T 1upq_A           88 VLAADTLEDLRGWLRALGRASRAE  111 (123)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHC--
T ss_pred             EEECCCHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999998653

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1

Probab=99.94  E-value=3.9e-26  Score=166.56  Aligned_cols=102  Identities=18%  Similarity=0.328  Sum_probs=87.7

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYL  122 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~  122 (171)
                      ...++++|||.|+++..+.|++|||||+++.|+||+++.+..+.|.|+|.++.............++++|.|.+++++|+
T Consensus        11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r~~~   90 (125)
T 1eaz_A           11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFY   90 (125)
T ss_dssp             -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEE
T ss_pred             CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEeCCcEEE
Confidence            45788999999999888999999999999999999999999999999999875433221112346799999999999999


Q ss_pred             EEeCCHHHHHHHHHHHHHHhhh
Q psy7933         123 MQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      |+|++++|+++||.+|+.++..
T Consensus        91 l~a~s~~e~~~W~~al~~~i~~  112 (125)
T 1eaz_A           91 VQADSPEEMHSWIKAVSGAIVA  112 (125)
T ss_dssp             EECSSHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCHHHHHHHHHHHHHHHHh
Confidence            9999999999999999998863

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.94  E-value=8.1e-26  Score=162.66  Aligned_cols=98  Identities=18%  Similarity=0.326  Sum_probs=87.1

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCe-EEEeecchhhhcCCCcEEEEEeCCceE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATA-QVEYSEDQQAMVRVPFSFSVVTKHGGY  121 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~-~V~~~~~~~~~~~r~~~F~I~t~~rt~  121 (171)
                      ...++++|||.|+++..+.|++|||||.++.|+||+++++..+.|.|+|.++ .|...++.   .+++++|.|.+++++|
T Consensus         5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~---~~~~~~F~i~~~~r~~   81 (115)
T 2dn6_A            5 SSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDK---DGKKCLFLVKCFDKTF   81 (115)
T ss_dssp             CCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTTCSSEEEEECCCTTCEEEEECCC---TTCCSEEEEECSSCEE
T ss_pred             CCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCCCcccCcEEEecCcEEEEECCCC---CCCeeEEEEEeCCCEE
Confidence            3578899999999998899999999999999999999999899999999975 55544332   2578999999999999


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +|+|++++|+++||.+|+.++.
T Consensus        82 ~l~a~s~~e~~~Wi~ai~~~~~  103 (115)
T 2dn6_A           82 EISASDKKKKQEWIQAIHSTIH  103 (115)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999875

>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*

Probab=99.94  E-value=8.2e-26  Score=164.97  Aligned_cols=97  Identities=22%  Similarity=0.432  Sum_probs=86.9

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-----
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-----  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-----  118 (171)
                      ..++++|||.|+++..+.|++|||||+++.|+||+++.+..+.|.|+|.++.|...++.    +++++|.|.+++     
T Consensus         3 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~----~~~~~f~i~~~~~~~~~   78 (127)
T 1fgy_A            3 FNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVLDP----RKPNCFELYNPSHKGQV   78 (127)
T ss_dssp             SSCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECCS----SCSSEEEEECSSSTTCC
T ss_pred             CCCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCCCCCcceEEECCceEEEEccCC----CCCceEEEecCCccccc
Confidence            36789999999998889999999999999999999999999999999999987655432    579999998763     


Q ss_pred             -----------------ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         119 -----------------GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       119 -----------------rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                                       ++|+|+|+|++|+++||.+|+.++..
T Consensus        79 ~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~  121 (127)
T 1fgy_A           79 IKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR  121 (127)
T ss_dssp             CCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             cccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhcc
Confidence                             78999999999999999999998864

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.94  E-value=2.5e-26  Score=168.20  Aligned_cols=98  Identities=19%  Similarity=0.328  Sum_probs=85.1

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEe--CCcEEEecCCCCC--ccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVR--RPYVFIFRDEKDP--VERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~--~~~L~yYk~~~d~--~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-  118 (171)
                      ..++++|||.|+++..+.|++|||||+  ++.|+||+++.+.  .++|.|+|.++.|...+      .++++|.|.+++ 
T Consensus         6 ~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~v~~~~------~~~~~F~i~~~~~   79 (120)
T 2d9x_A            6 SGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPSD------EDSHTFTVNAASG   79 (120)
T ss_dssp             SCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCCEECCS------SSSSCEEECCSSS
T ss_pred             CCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcceEEEEecC------CCCCEEEEEcCCC
Confidence            357799999999988899999999999  5799999988764  78999999999876532      357999999986 


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHhhhhhh
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLLAGQIR  147 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~~~~~~  147 (171)
                      ++|+|+|+|++||++||++|+.++.....
T Consensus        80 r~~~l~a~s~~e~~~Wi~al~~~~~~~~~  108 (120)
T 2d9x_A           80 EQYKLRATDAKERQHWVSRLQICTQHHTE  108 (120)
T ss_dssp             CCEEECCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999998865443

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.94  E-value=1.5e-25  Score=162.24  Aligned_cols=96  Identities=20%  Similarity=0.365  Sum_probs=84.7

Q ss_pred             CCceeEEeEEEeeeC-CCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceE
Q psy7933          43 SPVVSRKGYLNILEQ-KTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGY  121 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~-~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~  121 (171)
                      +..++++|||.|+++ ..+.|+||||||+++.|+||+++.+..++|.|+|.++......       .+++|.|.+++++|
T Consensus         5 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~-------~~~~F~i~~~~r~~   77 (115)
T 2cod_A            5 SSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQ-------GDNKFEVVTTQRTF   77 (115)
T ss_dssp             CSCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEEE-------TTTEEEEEESSCCE
T ss_pred             CCCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCCcccCCEEECCcceEEEeC-------CCCEEEEEeCCcEE
Confidence            356789999999998 6789999999999999999999999899999999988533222       26999999999999


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      +|+|++++|+++||.+|+.++..+
T Consensus        78 ~l~a~s~~e~~~Wi~~l~~~~~~~  101 (115)
T 2cod_A           78 VFRVEKEEERNDWISILLNALKSQ  101 (115)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999988543

>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.94  E-value=1.7e-25  Score=166.59  Aligned_cols=116  Identities=17%  Similarity=0.200  Sum_probs=89.4

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEE-eCCcEEEecCCCCCccceEEECC-Ce-EEEeec-----chhhhcCCCcEEEE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAV-RRPYVFIFRDEKDPVERALVNLA-TA-QVEYSE-----DQQAMVRVPFSFSV  114 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL-~~~~L~yYk~~~d~~~~g~I~L~-~~-~V~~~~-----~~~~~~~r~~~F~I  114 (171)
                      ...++++|||.|+++..+.|||||||| +++.|+||+++.+..+.|.|.|. .+ .|....     .......++++|.|
T Consensus         5 ~~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I   84 (130)
T 2d9v_A            5 SSGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTV   84 (130)
T ss_dssp             CCCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEE
T ss_pred             CCceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCCCCCcCcEEEE
Confidence            457889999999999889999999999 89999999999988899999886 33 222110     00011357899999


Q ss_pred             EeC-CceEEEEeCCHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCCCCCCC
Q psy7933         115 VTK-HGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPASPALGPSS  165 (171)
Q Consensus       115 ~t~-~rt~~f~A~s~~E~~~WI~aI~~~~~~~~~~~~~~r~~~~~~~~~~~~  165 (171)
                      .|+ .++|+|+|+|++||++||+||+.++..       .--++.....|||+
T Consensus        85 ~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~-------~~~~~~~~p~~~~~  129 (130)
T 2d9v_A           85 NLREGSRLHLCAETRDDAIAWKTALMEANST-------PAPAGATVPSGPSS  129 (130)
T ss_dssp             EETTSCEEEEECSSHHHHHHHHHHHHHHHTC-------CCCTTSCCCCCCCC
T ss_pred             EeCCCCEEEEEcCCHHHHHHHHHHHHHHHcC-------CCCCCCCCCCCCCC
Confidence            995 499999999999999999999998742       12244455566665

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A

Probab=99.93  E-value=2.2e-25  Score=158.99  Aligned_cols=100  Identities=21%  Similarity=0.324  Sum_probs=84.5

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCC--cEEEecCCCCCccceEEECCCeEEEeecchh--hhcCCCcEEEEEeCC
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRP--YVFIFRDEKDPVERALVNLATAQVEYSEDQQ--AMVRVPFSFSVVTKH  118 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~--~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~--~~~~r~~~F~I~t~~  118 (171)
                      ...++++|||.|+++..+.|++|||||+++  .|+||+++.+..+.|.|+|.++.|....+..  ...+++++|.|.+++
T Consensus         4 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~   83 (109)
T 2i5f_A            4 TGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITAD   83 (109)
T ss_dssp             CCCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEECTT
T ss_pred             cCceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCC
Confidence            357899999999999889999999999986  9999999998899999999998876543221  012478999999986


Q ss_pred             -ceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         119 -GGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       119 -rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                       ++|+|+|+|++||++||.+|+.++
T Consensus        84 ~~~~~l~a~s~~e~~~Wi~ai~~~~  108 (109)
T 2i5f_A           84 EVHYFLQAATPKERTEWIKAIQMAS  108 (109)
T ss_dssp             CCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCHHHHHHHHHHHHHHh
Confidence             669999999999999999999875

>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.93  E-value=5.4e-26  Score=167.37  Aligned_cols=101  Identities=11%  Similarity=0.211  Sum_probs=85.9

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCC---cEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCce
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRP---YVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGG  120 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~---~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt  120 (171)
                      .+++++|||.|++. .+.|+||||||+++   .||||++++|..+.|.|+|.++.|..... .....++|+|+|.++.++
T Consensus         6 ~~~~~~G~L~k~~~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g~~V~~~~~-~~~~~~~~~Fki~~~~~~   83 (112)
T 2coc_A            6 SGSLLCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDP-EERLDSGHVWKLQWAKQS   83 (112)
T ss_dssp             SSSSSEEEEEEESS-SSCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGGCEEECCCS-SSCCSSSEEEEEEETTEE
T ss_pred             CCceEEEEEEecCC-CCCceEEEEEEECCCccEEEEECCCCccCcceEEEcCCCEEEecCc-ccccCCCCEEEEecCCeE
Confidence            45668899999754 78999999999985   79999999999999999999999875211 112357899999999999


Q ss_pred             EEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         121 YLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       121 ~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      |+|+|+|+++|++||++|+.+..+..
T Consensus        84 y~f~A~s~e~~~~Wl~al~~A~~~~~  109 (112)
T 2coc_A           84 WYLSASSAELQQQWLETLSTAAHSGP  109 (112)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEcCCHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999876543

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A

Probab=99.93  E-value=2e-25  Score=164.33  Aligned_cols=101  Identities=21%  Similarity=0.313  Sum_probs=86.7

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCC--cEEEecCCCCCccceEEECCCeEEEeecchh--hhcCCCcEEEEEeCC
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRP--YVFIFRDEKDPVERALVNLATAQVEYSEDQQ--AMVRVPFSFSVVTKH  118 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~--~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~--~~~~r~~~F~I~t~~  118 (171)
                      ...++++|||.|+++..+.|++|||||+++  .|+||+++.+..+.|.|+|.++.|....+..  ...+++++|.|.+++
T Consensus        15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~   94 (129)
T 1x05_A           15 RGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITAD   94 (129)
T ss_dssp             CSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTT
T ss_pred             cCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCC
Confidence            357899999999999889999999999976  8999999998999999999999876543220  012478999999975


Q ss_pred             -ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         119 -GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       119 -rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                       ++|+|+|++++||++||.+|+.++.
T Consensus        95 ~~~~~l~a~s~~e~~~Wi~al~~~~~  120 (129)
T 1x05_A           95 EVHYFLQAATPKERTEWIKAIQMASR  120 (129)
T ss_dssp             CCCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHHHH
Confidence             7799999999999999999999875

>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*

Probab=99.93  E-value=1.9e-25  Score=166.81  Aligned_cols=99  Identities=17%  Similarity=0.336  Sum_probs=82.7

Q ss_pred             CceeEEeEEEee----eC--CCCCceEEEEEEeCCcEEEecCCC-----------CCccceEEECCCeEEEeecchhhhc
Q psy7933          44 PVVSRKGYLNIL----EQ--KTNGWKKRWVAVRRPYVFIFRDEK-----------DPVERALVNLATAQVEYSEDQQAMV  106 (171)
Q Consensus        44 ~~v~k~GwL~K~----g~--~~~~WkrRWFVL~~~~L~yYk~~~-----------d~~~~g~I~L~~~~V~~~~~~~~~~  106 (171)
                      ..+.|+|||.|+    ++  ..++|++|||||+++.|+||++++           +..+.|.|+|.++.|....+   ..
T Consensus        10 ~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~---~~   86 (129)
T 2p0d_A           10 HEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRH---LS   86 (129)
T ss_dssp             CSEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECTT---SC
T ss_pred             cceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCC---CC
Confidence            478899999996    23  237999999999999999999994           56899999999998876433   23


Q ss_pred             CCCcEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         107 RVPFSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       107 ~r~~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      +++|+|+|.|++ ++|+|+|+|++||++||++|+.++...
T Consensus        87 kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~  126 (129)
T 2p0d_A           87 SRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL  126 (129)
T ss_dssp             SSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence            688999999986 679999999999999999999998643

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.93  E-value=1.4e-25  Score=167.72  Aligned_cols=98  Identities=15%  Similarity=0.349  Sum_probs=80.4

Q ss_pred             ceeEEeEEEeee-CCCCCceEEEEEEe---CCcEEEecC----CCCCccceEEECCCe-EEEeecchhhhcCCCcEEEEE
Q psy7933          45 VVSRKGYLNILE-QKTNGWKKRWVAVR---RPYVFIFRD----EKDPVERALVNLATA-QVEYSEDQQAMVRVPFSFSVV  115 (171)
Q Consensus        45 ~v~k~GwL~K~g-~~~~~WkrRWFVL~---~~~L~yYk~----~~d~~~~g~I~L~~~-~V~~~~~~~~~~~r~~~F~I~  115 (171)
                      ...++|||.|++ ...+.||||||||+   +..|+||++    +.+.++.|.|+|..+ .|....... -.+++|+|.|.
T Consensus        14 ~~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~-~~~~~~~F~i~   92 (126)
T 1v5p_A           14 QNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQ-KPKTPFCFVIN   92 (126)
T ss_dssp             CCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTT-SCSCSSEEEEE
T ss_pred             CCceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCccc-CCCCCEEEEEE
Confidence            445899999998 56789999999999   557888898    567889999999984 555432111 12567999999


Q ss_pred             eCCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         116 TKHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       116 t~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+.|+|+|+|+|++||++||++|+.+..
T Consensus        93 t~~r~y~l~A~s~~e~~~Wi~al~~a~~  120 (126)
T 1v5p_A           93 ALSQRYFLQANDQKDLKDWVEALNQASK  120 (126)
T ss_dssp             CSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999998764

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.93  E-value=3.1e-25  Score=160.08  Aligned_cols=100  Identities=18%  Similarity=0.356  Sum_probs=86.0

Q ss_pred             CceeEEeEEEeeeC-CCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-CceE
Q psy7933          44 PVVSRKGYLNILEQ-KTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-HGGY  121 (171)
Q Consensus        44 ~~v~k~GwL~K~g~-~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-~rt~  121 (171)
                      ..++++|||.|+++ ..+.|++|||||+++.|+||+++++..+.|.|+|.++.|...... ....++|+|.|.++ .++|
T Consensus         9 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~-~~~~~~~~F~i~~~~~r~~   87 (117)
T 2d9y_A            9 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPS-DNISRKHTFKAEHAGVRTY   87 (117)
T ss_dssp             CCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTCCSCCEEEECSSCEEEECCTT-TTCCCSSEEEEECSSSCEE
T ss_pred             CCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCCCCCcCCEEEeCCeEEEEcCcc-ccCCCccEEEEEcCCCcEE
Confidence            46789999999984 677999999999999999999999999999999999987543221 12467899999764 6999


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      +|+|+|++|+++||.+|+.++..
T Consensus        88 ~l~a~s~~e~~~Wi~al~~~~~~  110 (117)
T 2d9y_A           88 FFSAESPEEQEAWIQAMGEAARV  110 (117)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCC
T ss_pred             EEEcCCHHHHHHHHHHHHHHHhh
Confidence            99999999999999999998753

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.93  E-value=4.1e-25  Score=160.70  Aligned_cols=99  Identities=18%  Similarity=0.371  Sum_probs=85.0

Q ss_pred             CceeEEeEEEeeeC-CCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-CceE
Q psy7933          44 PVVSRKGYLNILEQ-KTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-HGGY  121 (171)
Q Consensus        44 ~~v~k~GwL~K~g~-~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-~rt~  121 (171)
                      ..++++|||.|+++ ..+.|++|||||+++.|+||+++.+..+.|.|+|.++.|...... ...+++++|.|.++ .++|
T Consensus        20 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~-~~~~~~~~F~i~~~~~r~~   98 (122)
T 2yry_A           20 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPS-DNISRKHTFKAEHAGVRTY   98 (122)
T ss_dssp             CCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEESTTCCCEECCTT-CSCSSSSEEEEECSSSCEE
T ss_pred             CCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCCCCCcccEEEcCCCEEEEcCcc-ccCCcccEEEEecCCCcEE
Confidence            46889999999984 677999999999999999999999999999999999876543211 12367899999865 6999


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +|+|+|++|+++||.+|+.++.
T Consensus        99 ~l~a~s~~e~~~Wi~al~~a~~  120 (122)
T 2yry_A           99 FFSAESPEEQEAWIQAMGEAAR  120 (122)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHC
T ss_pred             EEEcCCHHHHHHHHHHHHHHHh
Confidence            9999999999999999998864

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A

Probab=99.93  E-value=1.4e-25  Score=159.17  Aligned_cols=91  Identities=16%  Similarity=0.367  Sum_probs=80.4

Q ss_pred             EEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC--ccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-CceEEEE
Q psy7933          48 RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP--VERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-HGGYLMQ  124 (171)
Q Consensus        48 k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~--~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-~rt~~f~  124 (171)
                      ++|||.|+++..+.|++|||||+++.|+||+++++.  .+.|.|+|.++.|...++      .+++|.|+++ .++|+|+
T Consensus         1 ~eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~~~v~~~~~------~~~~F~i~~~~~r~~~l~   74 (103)
T 3rcp_A            1 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAVCEIKVHSA------DNTRMELIIPGEQHFYMK   74 (103)
T ss_dssp             CEEEEEEECCTTTCEEEEEEEEETTEEEEESSCC---CCCSCEEEGGGCEEECCTT------CSSEEEEEETTTEEEEEE
T ss_pred             CceEEEEccCCCCCeeceEEEEECCEEEEEecCCcccCCcccEEEeeeeEEEEcCC------CCceEEEEeCCCCEEEEE
Confidence            489999999999999999999999999999999863  589999999888865432      4789999997 7999999


Q ss_pred             eCCHHHHHHHHHHHHHHhhh
Q psy7933         125 TAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       125 A~s~~E~~~WI~aI~~~~~~  144 (171)
                      |+|++||++||.+|+.++..
T Consensus        75 a~s~~e~~~Wi~al~~a~~~   94 (103)
T 3rcp_A           75 AVNAAERQRWLVALGSSKAS   94 (103)
T ss_dssp             CSSHHHHHHHHHHHHTTSCC
T ss_pred             CCCHHHHHHHHHHHHHHHHh
Confidence            99999999999999998754

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B

Probab=99.93  E-value=2.5e-25  Score=162.29  Aligned_cols=97  Identities=16%  Similarity=0.350  Sum_probs=79.9

Q ss_pred             eEEeEEEeeeC----CCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEE--eecchhhhcCCCcEEEEEeC-Cc
Q psy7933          47 SRKGYLNILEQ----KTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVE--YSEDQQAMVRVPFSFSVVTK-HG  119 (171)
Q Consensus        47 ~k~GwL~K~g~----~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~--~~~~~~~~~~r~~~F~I~t~-~r  119 (171)
                      .|+|||.|+++    ..+.|++|||||+++.|+||+++++..+.+.|+|.++.+.  ...+   ...|+|+|+|.+. .+
T Consensus         1 tkeG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~~~p~~~i~l~~~~~~~~~~~~---~~~r~~~F~l~~~~~~   77 (112)
T 3cxb_B            1 TKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGGCRRAN---TTDRPHAFQVILSDRP   77 (112)
T ss_dssp             CEEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSCCSCSEEEETTC-CEEEEEECC---CSSCTTEEEEEETTSC
T ss_pred             CceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCCCCccceEEecCCEEEeeeccC---CCCCCeEEEEEcCCCC
Confidence            38999998754    4569999999999999999999999999999999876443  2122   2368999999975 67


Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         120 GYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      +|+|+|+|++||++||++|+.++.+..
T Consensus        78 ~y~f~A~s~ee~~~Wi~ai~~~~~~~~  104 (112)
T 3cxb_B           78 CLELSAESEAEMAEWMQHLCQAVSKGV  104 (112)
T ss_dssp             CEEEECSSHHHHHHHHHHHHHHHTCC-
T ss_pred             EEEEEcCCHHHHHHHHHHHHHHhhccc
Confidence            999999999999999999999886543

>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.93  E-value=9.8e-26  Score=170.41  Aligned_cols=105  Identities=16%  Similarity=0.325  Sum_probs=89.6

Q ss_pred             CceeEEeEEEeeeC------CCCCceEEEEEEeCC-----cEEEecCCC-CCccceEEECCCeEEEeecchhhhcCCCcE
Q psy7933          44 PVVSRKGYLNILEQ------KTNGWKKRWVAVRRP-----YVFIFRDEK-DPVERALVNLATAQVEYSEDQQAMVRVPFS  111 (171)
Q Consensus        44 ~~v~k~GwL~K~g~------~~~~WkrRWFVL~~~-----~L~yYk~~~-d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~  111 (171)
                      ..++++|||.|++.      ..+.|+||||||++.     .|+||+++. +..+.|.|+|.+|.+.....    ..++|+
T Consensus        16 ~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~~~----~~~~~~   91 (150)
T 1wg7_A           16 GGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNN----KVRRFA   91 (150)
T ss_dssp             CCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCCC----SSCTTE
T ss_pred             CCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccCEEEecCC----CCCceE
Confidence            46889999999984      346999999999987     999999988 78899999999998775432    257899


Q ss_pred             EEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhhhhhhccccc
Q psy7933         112 FSVVTKH-GGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSR  152 (171)
Q Consensus       112 F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~~~~~~~~~~  152 (171)
                      |.|.+++ ++|+|+|++++||++||.+|+.++.......+..
T Consensus        92 F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~~~~~~~~  133 (150)
T 1wg7_A           92 FELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQE  133 (150)
T ss_dssp             EEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            9999995 9999999999999999999999987665544444

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.93  E-value=1.8e-25  Score=161.32  Aligned_cols=101  Identities=19%  Similarity=0.271  Sum_probs=86.2

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEe--CCcEEEecCCCCCccceEEECCCeEEEeecchh----hhcCCCcEEEEEe
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVR--RPYVFIFRDEKDPVERALVNLATAQVEYSEDQQ----AMVRVPFSFSVVT  116 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~--~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~----~~~~r~~~F~I~t  116 (171)
                      ...++++|||.|+++..+.|+||||||+  ++.|+||+++.+..++|.|+|.++.+....+..    ....++++|.|.|
T Consensus         5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~   84 (117)
T 1v5u_A            5 SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKT   84 (117)
T ss_dssp             CCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEE
T ss_pred             cCCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEEEEC
Confidence            3567899999999998899999999999  889999999999899999999998765432210    0124569999999


Q ss_pred             CCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         117 KHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       117 ~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +.++|+|+|+|++|+++||.+|+.++.
T Consensus        85 ~~r~~~l~a~s~~e~~~Wi~al~~~i~  111 (117)
T 1v5u_A           85 TRRVYNFCAQDVPSAQQWVDRIQSCLS  111 (117)
T ss_dssp             SSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred             CCceEEEECCCHHHHHHHHHHHHHHhc
Confidence            999999999999999999999998774

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A

Probab=99.93  E-value=2.1e-25  Score=160.56  Aligned_cols=99  Identities=10%  Similarity=0.212  Sum_probs=81.9

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEE-eCCcEEEecCCCCCccceEEECCCeEEEeecc-------hhhhcCCCcEEEEE
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAV-RRPYVFIFRDEKDPVERALVNLATAQVEYSED-------QQAMVRVPFSFSVV  115 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL-~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~-------~~~~~~r~~~F~I~  115 (171)
                      ..++++|||.|+++..+.|++||||| .++.|+||+++.+..+.|.|+|....|.....       ......++++|.|.
T Consensus         3 ~~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~   82 (112)
T 3aj4_A            3 MAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIV   82 (112)
T ss_dssp             CSCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEE
T ss_pred             cceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcEEEEE
Confidence            46789999999999889999999999 88899999999998999999997655432110       11112347899999


Q ss_pred             eC-CceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         116 TK-HGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       116 t~-~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      ++ .++|+|+|+|++||++||.+|+.+.
T Consensus        83 ~~~~r~~~l~a~s~~e~~~Wi~al~~a~  110 (112)
T 3aj4_A           83 CRDGKTISLCAESTDDCLAWKFTLQDSR  110 (112)
T ss_dssp             ETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence            76 7999999999999999999999876

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.93  E-value=9.1e-25  Score=158.72  Aligned_cols=100  Identities=19%  Similarity=0.278  Sum_probs=85.4

Q ss_pred             CceeEEeEEEeeeCCC-CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEE
Q psy7933          44 PVVSRKGYLNILEQKT-NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYL  122 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~-~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~  122 (171)
                      ..++++|||.|+++.. +.|+||||||+++.|+||+++.+ .+.+.|.|.++.|...+      .++++|.|.|+.++|+
T Consensus         8 ~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~~-~~~~~i~l~~~~v~~~~------~~~~~F~I~~~~r~~~   80 (114)
T 2da0_A            8 YGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSN-RQPAKLNLLTCQVKPNA------EDKKSFDLISHNRTYH   80 (114)
T ss_dssp             CCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSCC-SCCEEEETTTSEEEECS------SSSSCEEEEETTEEEE
T ss_pred             CCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCCC-CCCCEEEeeeeEEEECC------CCCCEEEEEcCCcEEE
Confidence            4678999999999866 89999999999999999999776 56677888777766322      3679999999999999


Q ss_pred             EEeCCHHHHHHHHHHHHHHhhhhhhccc
Q psy7933         123 MQTAGAREVHEWLYAINPLLAGQIRSKT  150 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~~~~~~~~~  150 (171)
                      |+|+|++||++||.+|+.++........
T Consensus        81 l~a~s~~e~~~Wi~al~~~~~~~~~~~~  108 (114)
T 2da0_A           81 FQAEDEQDYVAWISVLTNSKEEALTMAF  108 (114)
T ss_dssp             EECSSHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             EEcCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999998876655443

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A

Probab=99.93  E-value=5.5e-25  Score=166.38  Aligned_cols=101  Identities=19%  Similarity=0.440  Sum_probs=86.9

Q ss_pred             CceeEEeEEEeeeCCC----CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-
Q psy7933          44 PVVSRKGYLNILEQKT----NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~----~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-  118 (171)
                      ..++++|||.|+++..    +.|+||||||+++.|+||+++.+..+.|.|+|.++.|...++.....+++++|.|.+++ 
T Consensus        15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~   94 (148)
T 1u5f_A           15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK   94 (148)
T ss_dssp             SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTS
T ss_pred             CCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCCcccceEEEcCCcEEEECCCcccCCCCccEEEEECCCC
Confidence            5889999999999754    59999999999999999999999999999999999887543211123567999999987 


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      ++|+|+|+|++||++||.+|+.++..
T Consensus        95 r~~~l~a~s~~e~~~Wi~al~~~i~~  120 (148)
T 1u5f_A           95 RIYQFTAASPKDAEEWVQQLKFILQD  120 (148)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHCC-
T ss_pred             cEEEEECCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999998764

>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A

Probab=99.92  E-value=3.9e-25  Score=164.46  Aligned_cols=97  Identities=12%  Similarity=0.253  Sum_probs=81.9

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCC---CCccceEEECCCeEEEeecchhh-----hcCCCcEEEEEeC
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEK---DPVERALVNLATAQVEYSEDQQA-----MVRVPFSFSVVTK  117 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~---d~~~~g~I~L~~~~V~~~~~~~~-----~~~r~~~F~I~t~  117 (171)
                      ++++|||.|++...++|++|||||++++|+||++++   +..+.|.|+|.+|.|....+.+.     ...+++.|.|.+.
T Consensus         6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~   85 (120)
T 4a6h_A            6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAK   85 (120)
T ss_dssp             CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEES
T ss_pred             ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeC
Confidence            889999999999899999999999999999999875   66799999999999977443210     0126789999876


Q ss_pred             C-------ceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         118 H-------GGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       118 ~-------rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      +       ++|+|+|+|.+||++||++|+.+.
T Consensus        86 ~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~  117 (120)
T 4a6h_A           86 QNGIIRRGHNWVFKADSYESMMSWFDNLKILT  117 (120)
T ss_dssp             SSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred             CCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence            5       589999999999999999999875

>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A

Probab=99.92  E-value=6.5e-25  Score=164.33  Aligned_cols=96  Identities=16%  Similarity=0.283  Sum_probs=82.4

Q ss_pred             CceeEEeEEEee-eCCCC-CceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC---
Q psy7933          44 PVVSRKGYLNIL-EQKTN-GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH---  118 (171)
Q Consensus        44 ~~v~k~GwL~K~-g~~~~-~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~---  118 (171)
                      ..|+++|||.|+ ++..+ +||+|||||++++|+|||++.+.+++|.|+|.++.|...+. .. ..++|+|+|.+++   
T Consensus        10 ~~VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~eke~~G~IpL~~~~vr~v~~-~~-~~rk~~F~l~~~d~r~   87 (125)
T 1dyn_A           10 ILVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEK-GF-MSSKHIFALFNTEQRN   87 (125)
T ss_dssp             CCEEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTTCSCEEEEEECTTEEEEECCS-CS-SSSCEEEEEEETTSSC
T ss_pred             cceEEEEEEEEecCccccCCceeeEEEEeccceeeecCCcccccceEEECCCceEeccCC-CC-CCCceEEEEECCCCcc
Confidence            358999999995 55565 59999999999999999999999999999999999865433 22 2689999999864   


Q ss_pred             -----ceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         119 -----GGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       119 -----rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                           ++|.|+|+|.+||++||.+|..+
T Consensus        88 v~~~h~~y~LsA~t~ee~~~Wi~s~~ra  115 (125)
T 1dyn_A           88 VYKDYRQLELACETQEEVDSWKASFLRA  115 (125)
T ss_dssp             SSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred             ccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence                 48999999999999999999654

>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.92  E-value=2.7e-25  Score=163.09  Aligned_cols=98  Identities=23%  Similarity=0.354  Sum_probs=82.4

Q ss_pred             CCceeEEeEEEeeeCC--------CCCceEEEEEEeCCcEEEecCCCCCc------cceEEECCCeEEEeecchhhhcCC
Q psy7933          43 SPVVSRKGYLNILEQK--------TNGWKKRWVAVRRPYVFIFRDEKDPV------ERALVNLATAQVEYSEDQQAMVRV  108 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~--------~~~WkrRWFVL~~~~L~yYk~~~d~~------~~g~I~L~~~~V~~~~~~~~~~~r  108 (171)
                      ...+.++|||.|++..        .+.|++|||||+++.|+||+++++..      +...|+|.++.+....+   ..++
T Consensus         5 ~~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~---~~~r   81 (123)
T 1wjm_A            5 SSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFD---YRKR   81 (123)
T ss_dssp             CCCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTT---CSSC
T ss_pred             CCCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeeccc---ccCC
Confidence            3577899999999864        67999999999999999999887632      34568888887765443   2368


Q ss_pred             CcEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         109 PFSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       109 ~~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +|+|.|.|++ ++|+|+|+|++||++||++|+.++.
T Consensus        82 ~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~  117 (123)
T 1wjm_A           82 KHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIA  117 (123)
T ss_dssp             SSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence            9999999886 8999999999999999999999886

>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*

Probab=99.92  E-value=3.3e-25  Score=173.18  Aligned_cols=99  Identities=11%  Similarity=0.182  Sum_probs=80.7

Q ss_pred             ceeEEeEEEeeeCC-----CCCceEEEEEEeCCcEEEecC----CCCCccceEEECCCeEEEeec---chhhh-------
Q psy7933          45 VVSRKGYLNILEQK-----TNGWKKRWVAVRRPYVFIFRD----EKDPVERALVNLATAQVEYSE---DQQAM-------  105 (171)
Q Consensus        45 ~v~k~GwL~K~g~~-----~~~WkrRWFVL~~~~L~yYk~----~~d~~~~g~I~L~~~~V~~~~---~~~~~-------  105 (171)
                      .++|+|||.|++..     .++||+|||||+++.|+||++    +.+.+++|.|+|.++.+....   +....       
T Consensus         2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~   81 (169)
T 1btk_A            2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRR   81 (169)
T ss_dssp             CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---
T ss_pred             ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccc
Confidence            47899999998743     368999999999999999998    566789999999988643222   11100       


Q ss_pred             -------------cCCCcEEEEEeCCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         106 -------------VRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       106 -------------~~r~~~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                                   ..++++|.|+|++++|+|+|+|++||++||++|+.++.
T Consensus        82 ~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~  132 (169)
T 1btk_A           82 GEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIR  132 (169)
T ss_dssp             ------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred             cCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHH
Confidence                         01239999999999999999999999999999999986

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.92  E-value=4.1e-25  Score=162.43  Aligned_cols=101  Identities=26%  Similarity=0.365  Sum_probs=85.5

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEe--CCcEEEecCC-CCCccceEEECCCeEEEeecchh-----hhcCCCcEEEE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVR--RPYVFIFRDE-KDPVERALVNLATAQVEYSEDQQ-----AMVRVPFSFSV  114 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~--~~~L~yYk~~-~d~~~~g~I~L~~~~V~~~~~~~-----~~~~r~~~F~I  114 (171)
                      ...++++|||.|++...+.|+||||||+  +..|+||+++ .+..++|.|+|.++.|...++..     ....++++|.|
T Consensus        15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I   94 (129)
T 1x1g_A           15 SGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKV   94 (129)
T ss_dssp             CSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEE
T ss_pred             CCCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEE
Confidence            4689999999999988899999999999  4699999998 77899999999998776543320     00126899999


Q ss_pred             EeCC-ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         115 VTKH-GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       115 ~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .+++ ++|+|+|++++||++||.+|+.++.
T Consensus        95 ~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~  124 (129)
T 1x1g_A           95 ITKDDTHYYIQASSKAERAEWIEAIKKLTS  124 (129)
T ss_dssp             CCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred             EcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence            9986 7899999999999999999999875

>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A

Probab=99.92  E-value=2.3e-25  Score=165.23  Aligned_cols=98  Identities=17%  Similarity=0.279  Sum_probs=81.6

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC---------CccceEEECCCeEEEeecchhhhcCCCcEEEE
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD---------PVERALVNLATAQVEYSEDQQAMVRVPFSFSV  114 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d---------~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I  114 (171)
                      ..++|+|||.|+++..+.|++|||||.++.|+||+++.+         ..++|.|+|.+|.|+..++.  ..+++|+|+|
T Consensus        10 ~~~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~--~~~k~~~F~I   87 (124)
T 2w2x_D           10 DEHKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQG--KNQKSFVFIL   87 (124)
T ss_dssp             ---CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTC--BTTBSEEEEE
T ss_pred             hhcceeEEEEEECCCCCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCC--cCCCCEEEEE
Confidence            367899999999999999999999999999999997532         24589999999998765431  2358899999


Q ss_pred             EeC---CceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         115 VTK---HGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       115 ~t~---~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .++   .++|+|+|+|.+||++||+||+.++.
T Consensus        88 ~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~  119 (124)
T 2w2x_D           88 EPKQQGDPPVEFATDKVEELFEWFQSIREITW  119 (124)
T ss_dssp             EECC--CCCEEEEECCCHHHHHHHHHHHHHHC
T ss_pred             ECCCCCCceEEEEECCHHHHHHHHHHHHHHHH
Confidence            986   36799999999999999999998764

>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.92  E-value=4.2e-25  Score=158.64  Aligned_cols=94  Identities=21%  Similarity=0.400  Sum_probs=81.0

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC-CccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-CceE
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD-PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-HGGY  121 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d-~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-~rt~  121 (171)
                      ..++++|||.|+  ..+.|+||||||+++.|+||+++.+ ..+.+.|+|.++.|...++    .+++|+|.|.++ .++|
T Consensus         6 ~~~~~~G~L~K~--~~k~Wk~RwfvL~~~~L~yyk~~~~~~~~~~~i~l~~~~v~~~~~----~~~~~~F~i~~~~~r~~   79 (107)
T 2cof_A            6 SGLETSSYLNVL--VNSQWKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCEVVPDPS----PDHLYSFRILHKGEELA   79 (107)
T ss_dssp             CCCTTCCEEEEE--ETTEEEEEEEEECSSCEEEECSSTTCSEEEEEECTTTCEEECCCB----TTBSCEEEEEETTEEEE
T ss_pred             CCCcEeEEEEEe--cCCCcceEEEEEECCEEEEEeCCcccCCCeeEEeccceEEEECCC----CCCCeEEEEEeCCCeEE
Confidence            467899999999  6789999999999999999998865 4566777888887765443    257899999998 7999


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +|+|+|++||++||++|+.++.
T Consensus        80 ~l~A~s~~e~~~Wi~al~~~~~  101 (107)
T 2cof_A           80 KLEAKSSEEMGHWLGLLLSESG  101 (107)
T ss_dssp             EEECSSHHHHHHHHHHHHHHSS
T ss_pred             EEEcCCHHHHHHHHHHHHHHHc
Confidence            9999999999999999998764

>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}

Probab=99.92  E-value=2e-24  Score=167.60  Aligned_cols=102  Identities=8%  Similarity=0.180  Sum_probs=83.6

Q ss_pred             CCceeEEeEEEeeeCCC-----CCceEEEEEEeCCcEEEecCCCC-CccceEEECCCeEEEee-cchh--hhcCCCcEEE
Q psy7933          43 SPVVSRKGYLNILEQKT-----NGWKKRWVAVRRPYVFIFRDEKD-PVERALVNLATAQVEYS-EDQQ--AMVRVPFSFS  113 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~-----~~WkrRWFVL~~~~L~yYk~~~d-~~~~g~I~L~~~~V~~~-~~~~--~~~~r~~~F~  113 (171)
                      +.+++++|||.|++...     ++||||||||+++.|+||+++.+ ..++|.|+|..+.+... .+..  ....++++|.
T Consensus        12 ~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~   91 (164)
T 2lul_A           12 NFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQ   91 (164)
T ss_dssp             CSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEE
T ss_pred             CCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcccccccEEEEeeeEEEEeccccccCcccccceeEE
Confidence            56899999999998643     37999999999999999998765 45789999987654322 2111  1124679999


Q ss_pred             EEeCCceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         114 VVTKHGGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       114 I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      |.|++|+|+|+|+|++||++||+||++++..
T Consensus        92 i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~  122 (164)
T 2lul_A           92 VVHDANTLYIFAPSPQSRDLWVKKLKEEIKN  122 (164)
T ss_dssp             EECSSCEEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred             EecCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999863

>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}

Probab=99.92  E-value=5.1e-25  Score=162.88  Aligned_cols=99  Identities=18%  Similarity=0.382  Sum_probs=82.0

Q ss_pred             CceeEEeEEEee--eCCCCCceEEEEEEeCCcEEEecCCCC---CccceEEECCCeE---EEeecchhhhcCCCcEEEEE
Q psy7933          44 PVVSRKGYLNIL--EQKTNGWKKRWVAVRRPYVFIFRDEKD---PVERALVNLATAQ---VEYSEDQQAMVRVPFSFSVV  115 (171)
Q Consensus        44 ~~v~k~GwL~K~--g~~~~~WkrRWFVL~~~~L~yYk~~~d---~~~~g~I~L~~~~---V~~~~~~~~~~~r~~~F~I~  115 (171)
                      ..++++|||.|+  ++..+.|+||||||+++.|+||+++.+   ..+.|.|+|.++.   |...+.  ...+++|+|.|.
T Consensus         3 ~~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~--~~~~~~~~F~i~   80 (134)
T 2y7b_A            3 SSVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANR--EFCARRNTFELI   80 (134)
T ss_dssp             CCCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCT--TTCCCTTEEEEE
T ss_pred             CCceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccch--hhccCCCEEEEE
Confidence            468899999999  777789999999999999999996544   7899999999886   443221  123689999998


Q ss_pred             e--CC------------------ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         116 T--KH------------------GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       116 t--~~------------------rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      +  +.                  ++|+|+|+|++||++||.+|+.++..
T Consensus        81 ~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~  129 (134)
T 2y7b_A           81 TVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD  129 (134)
T ss_dssp             EEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence            7  33                  47999999999999999999998753

>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A

Probab=99.92  E-value=2e-25  Score=163.72  Aligned_cols=102  Identities=15%  Similarity=0.258  Sum_probs=82.7

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeC-CcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEe----CC
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRR-PYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVT----KH  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~-~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t----~~  118 (171)
                      ..++++|||.|+|+..+.|+||||||++ ..|+||+++.+..+.|.|+|..+.+..........+++++|.|.+    +.
T Consensus         6 ~~~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~   85 (125)
T 1unq_A            6 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTV   85 (125)
T ss_dssp             GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEE
T ss_pred             CCeeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeeeecccccCCCCEEEEEecCCCCc
Confidence            4688999999999988999999999995 699999999888888888887665421100000125789999995    56


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      ++|+|+|+|++||++||.+|+.++...
T Consensus        86 ~~~~~~a~s~~e~~~Wi~al~~~~~~~  112 (125)
T 1unq_A           86 IERTFHVETPEEREEWTTAIQTVADGL  112 (125)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence            899999999999999999999988643

>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A

Probab=99.91  E-value=2.3e-24  Score=152.98  Aligned_cols=91  Identities=21%  Similarity=0.379  Sum_probs=76.9

Q ss_pred             EEeEEEeee--------CCCCCceEEEEEEeCCcEEEecCCCC----C--ccceEEECCCeEEEeecchhhhcCCCcEEE
Q psy7933          48 RKGYLNILE--------QKTNGWKKRWVAVRRPYVFIFRDEKD----P--VERALVNLATAQVEYSEDQQAMVRVPFSFS  113 (171)
Q Consensus        48 k~GwL~K~g--------~~~~~WkrRWFVL~~~~L~yYk~~~d----~--~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~  113 (171)
                      ++|||.|++        ...+.|++|||||+++.|+||+++.+    .  .+.+.|+|.++.+...++.   .+++|+|.
T Consensus         1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~---~~~~~~F~   77 (106)
T 1btn_A            1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDY---KKKKHVFK   77 (106)
T ss_dssp             CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSC---CSSSSEEE
T ss_pred             CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEcccc---cCCccEEE
Confidence            489999999        66779999999999999999998863    1  3567899988877654432   36899999


Q ss_pred             EEeCC-ceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         114 VVTKH-GGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       114 I~t~~-rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                      |.|++ ++|+|+|+|++||++||.+|+.+
T Consensus        78 i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A  106 (106)
T 1btn_A           78 LRLSDGNEYLFQAKDDEEMNTWIQAISSA  106 (106)
T ss_dssp             EECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred             EEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence            99876 99999999999999999999863

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A

Probab=99.91  E-value=8.1e-24  Score=170.69  Aligned_cols=100  Identities=19%  Similarity=0.441  Sum_probs=87.1

Q ss_pred             CceeEEeEEEeeeCC----CCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-
Q psy7933          44 PVVSRKGYLNILEQK----TNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~----~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-  118 (171)
                      ..++++|||.|+++.    .+.||||||||+++.|+||+++.+..+.|.|+|.++.+...++.....+++++|.|.+++ 
T Consensus       104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~  183 (211)
T 1u5e_A          104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK  183 (211)
T ss_dssp             SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSS
T ss_pred             CCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCCccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCC
Confidence            478999999999973    569999999999999999999999999999999999887644311123568999999986 


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|+|+|++++||++||.+|+.++.
T Consensus       184 r~~~l~A~s~~e~~~Wi~aL~~ai~  208 (211)
T 1u5e_A          184 RIYQFTAASPKDAEEWVQQLKFILQ  208 (211)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEcCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999875

>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A

Probab=99.91  E-value=2.4e-24  Score=165.97  Aligned_cols=96  Identities=15%  Similarity=0.360  Sum_probs=69.7

Q ss_pred             ceeEEeEEE----------eeeCCCCCceEEEEEEeCCcEEEecCCCC--CccceEEECCC--eEEEeecchhhhcCCCc
Q psy7933          45 VVSRKGYLN----------ILEQKTNGWKKRWVAVRRPYVFIFRDEKD--PVERALVNLAT--AQVEYSEDQQAMVRVPF  110 (171)
Q Consensus        45 ~v~k~GwL~----------K~g~~~~~WkrRWFVL~~~~L~yYk~~~d--~~~~g~I~L~~--~~V~~~~~~~~~~~r~~  110 (171)
                      +++++|||.          |+|+..+.|++|||||+++.|+||+++.+  ..+.|.|+|..  +.+....+.   .+++|
T Consensus         2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~~~~---~~~~~   78 (168)
T 2j59_M            2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSE---TKRKN   78 (168)
T ss_dssp             -CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC--------CEECSSCEEEECSSS---CSCSS
T ss_pred             CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCcccccccCCceEecccceEEEecccc---CCCCC
Confidence            578999999          55667779999999999999999999966  56788887764  555433321   36899


Q ss_pred             EEEEEeCCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         111 SFSVVTKHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       111 ~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +|.|.+++++|+|+|++++||++||.+|+.++.
T Consensus        79 ~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~  111 (168)
T 2j59_M           79 VFRLTTSDCECLFQAEDRDDMLAWIKTIQESSN  111 (168)
T ss_dssp             EEEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             EEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999998864

>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1

Probab=99.91  E-value=2.1e-24  Score=158.67  Aligned_cols=97  Identities=16%  Similarity=0.342  Sum_probs=81.0

Q ss_pred             CceeEEeEEEeeeC--------CCCCceEEEEEEeCCcEEEecCCCCCcc--------ceEEECCCeEEEeecchhhhcC
Q psy7933          44 PVVSRKGYLNILEQ--------KTNGWKKRWVAVRRPYVFIFRDEKDPVE--------RALVNLATAQVEYSEDQQAMVR  107 (171)
Q Consensus        44 ~~v~k~GwL~K~g~--------~~~~WkrRWFVL~~~~L~yYk~~~d~~~--------~g~I~L~~~~V~~~~~~~~~~~  107 (171)
                      ..+.|+|||.|+..        ..+.|++|||||+++.|+||+++.+..+        .+.|+|.++.|....+.   .+
T Consensus         6 ~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~---~k   82 (122)
T 1dro_A            6 AGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDY---TK   82 (122)
T ss_dssp             SSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSS---SS
T ss_pred             CceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCC---CC
Confidence            46779999998864        3459999999999999999999987543        36799988877654432   36


Q ss_pred             CCcEEEEEe-CCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         108 VPFSFSVVT-KHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       108 r~~~F~I~t-~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|+|.|.| +.++|+|+|+|++||++||++|+.++.
T Consensus        83 r~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~  119 (122)
T 1dro_A           83 KKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSD  119 (122)
T ss_dssp             STTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred             CCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence            899999997 568999999999999999999999875

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}

Probab=99.90  E-value=2.2e-23  Score=169.48  Aligned_cols=99  Identities=13%  Similarity=0.372  Sum_probs=88.8

Q ss_pred             ccCCceeEEeEEEeeeCCC-----CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEE
Q psy7933          41 RISPVVSRKGYLNILEQKT-----NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVV  115 (171)
Q Consensus        41 ~~~~~v~k~GwL~K~g~~~-----~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~  115 (171)
                      +....++++|||.|+++..     +.|+||||||+++.|+||+++++..++|.|+|.++.+.....     .++++|.|.
T Consensus        53 ~~~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~~-----~k~~~F~I~  127 (228)
T 3tfm_A           53 RSKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEEKLKGTVEVRSAKEIIDNT-----NKENGIDII  127 (228)
T ss_dssp             SSCCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTCCSEEEEEEGGGCSEEEEET-----TTTSEEEEE
T ss_pred             ccCCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCCcceeEEEEcCCCEEeccCC-----CCCcEEEEE
Confidence            4467899999999999865     799999999999999999999998999999999987654322     478999999


Q ss_pred             eCCceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         116 TKHGGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       116 t~~rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      |++++|+|+|+|++||++||.+|+.++..
T Consensus       128 t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~  156 (228)
T 3tfm_A          128 MADRTFHLIAESPEDASQWFSVLSQVHSS  156 (228)
T ss_dssp             CSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred             cCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999874

>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}

Probab=99.90  E-value=3.3e-23  Score=153.42  Aligned_cols=101  Identities=16%  Similarity=0.317  Sum_probs=74.4

Q ss_pred             ceeEEeEEEeeeC--CCCCceEEEEEEeC-CcEEEecCCCC---CccceEEECCCeEEEeecc----------------h
Q psy7933          45 VVSRKGYLNILEQ--KTNGWKKRWVAVRR-PYVFIFRDEKD---PVERALVNLATAQVEYSED----------------Q  102 (171)
Q Consensus        45 ~v~k~GwL~K~g~--~~~~WkrRWFVL~~-~~L~yYk~~~d---~~~~g~I~L~~~~V~~~~~----------------~  102 (171)
                      .++|+|||.|+++  ..++||+|||||++ +.|+||++..|   ....+.|+|..+.+.....                .
T Consensus         3 ~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~   82 (128)
T 2rlo_A            3 IPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSA   82 (128)
T ss_dssp             CEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCC
T ss_pred             cceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCccccccccccccccccc
Confidence            5789999999954  56899999999996 67888876322   1223457776655543210                0


Q ss_pred             hhhcCCCcEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         103 QAMVRVPFSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       103 ~~~~~r~~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      .....++++|.|.|++ ++|+|+|+|++||++||+||+.++...
T Consensus        83 ~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~  126 (128)
T 2rlo_A           83 GQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILAS  126 (128)
T ss_dssp             SSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence            0001468999999988 999999999999999999999988643

>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}

Probab=99.89  E-value=9.2e-23  Score=151.27  Aligned_cols=98  Identities=17%  Similarity=0.360  Sum_probs=80.0

Q ss_pred             CCceeEEeEEEeeeC-------CCCCceEEEEEEeCCcEEEecCCCCC------------ccceEEECCCeEEEeec-ch
Q psy7933          43 SPVVSRKGYLNILEQ-------KTNGWKKRWVAVRRPYVFIFRDEKDP------------VERALVNLATAQVEYSE-DQ  102 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~-------~~~~WkrRWFVL~~~~L~yYk~~~d~------------~~~g~I~L~~~~V~~~~-~~  102 (171)
                      ..++.|+|||.++..       ..+.|++|||||+++.|+||+++++.            .+.+.|+|.++.|...+ + 
T Consensus         5 ~~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d-   83 (124)
T 3pp2_A            5 TKTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKD-   83 (124)
T ss_dssp             ----CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGG-
T ss_pred             CCcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEecccc-
Confidence            467899999998732       22499999999999999999998764            46789999999887653 3 


Q ss_pred             hhhcCCCcEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         103 QAMVRVPFSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       103 ~~~~~r~~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                        ..+|+|+|.|.|++ +.|+|+|+|++||++||++|+.++.
T Consensus        84 --~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~  123 (124)
T 3pp2_A           84 --KSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ  123 (124)
T ss_dssp             --GCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred             --cCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence              24689999999865 7899999999999999999999874

>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A

Probab=99.89  E-value=5.4e-23  Score=171.07  Aligned_cols=100  Identities=18%  Similarity=0.360  Sum_probs=83.7

Q ss_pred             CceeEEeEEE--------eeeCC----CCCceEEEEEEeCCcEEEecCC------CCCccceEEECCCeEEEeecchhhh
Q psy7933          44 PVVSRKGYLN--------ILEQK----TNGWKKRWVAVRRPYVFIFRDE------KDPVERALVNLATAQVEYSEDQQAM  105 (171)
Q Consensus        44 ~~v~k~GwL~--------K~g~~----~~~WkrRWFVL~~~~L~yYk~~------~d~~~~g~I~L~~~~V~~~~~~~~~  105 (171)
                      ..++|+|||.        |.|..    .++|++|||||+++.|+||+++      .+..+.|.|+|.++.|....+.   
T Consensus         9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~---   85 (263)
T 3a8p_A            9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEH---   85 (263)
T ss_dssp             -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTTC---
T ss_pred             CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEECCcC---
Confidence            5789999999        55555    7799999999999999999984      4568899999999887754332   


Q ss_pred             cCCCcEEEEEe-CCceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         106 VRVPFSFSVVT-KHGGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       106 ~~r~~~F~I~t-~~rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      .+++|+|.|.| ..++|+|+|+|++||++||++|+.++....
T Consensus        86 ~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~  127 (263)
T 3a8p_A           86 PKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLF  127 (263)
T ss_dssp             SSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence            25799999999 579999999999999999999999987554

>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*

Probab=99.88  E-value=2.1e-22  Score=172.97  Aligned_cols=98  Identities=23%  Similarity=0.472  Sum_probs=87.7

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-------
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-------  117 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-------  117 (171)
                      +++++|||.|+|+..+.|+||||||+++.|+||+++.+..++|.|+|.++.|...++    .+++++|+|.++       
T Consensus       212 ~~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~~~~p~G~I~L~~~~v~~~~~----~~~~~~F~I~~~~~~~~~~  287 (347)
T 2r09_A          212 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVED----PRKPNCFELYNPSHKGQVI  287 (347)
T ss_dssp             CCCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECC----SSCSSEEEEECSSSTTCCC
T ss_pred             ccccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCCccCCcEEEEcCCeEEEEccC----CCCCCEEEEEeCCcccccc
Confidence            568999999999988999999999999999999999998999999999998766443    268999999976       


Q ss_pred             ---------------CceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         118 ---------------HGGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       118 ---------------~rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                                     .++|+|+|+|++||++||.+|+.++....
T Consensus       288 ~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~~~  331 (347)
T 2r09_A          288 KACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDP  331 (347)
T ss_dssp             CCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHCCH
T ss_pred             ccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence                           48899999999999999999999886443

>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*

Probab=99.88  E-value=1.3e-22  Score=168.91  Aligned_cols=95  Identities=17%  Similarity=0.286  Sum_probs=80.6

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCC-------cEEEecCCCC-----CccceEEECCCeE-EEeecchhhhcCCCc
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRP-------YVFIFRDEKD-----PVERALVNLATAQ-VEYSEDQQAMVRVPF  110 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~-------~L~yYk~~~d-----~~~~g~I~L~~~~-V~~~~~~~~~~~r~~  110 (171)
                      ..++++|||.|+    +.||||||||+++       .|+||+++++     ..++|.|+|.++. |....+    .+++|
T Consensus         8 ~~v~k~G~L~K~----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~----~~~~~   79 (264)
T 1qqg_A            8 SDVRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRAD----SKNKH   79 (264)
T ss_dssp             -CEEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECC----SSCSS
T ss_pred             CCccEEEEEEEC----CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccC----CCCCc
Confidence            478999999998    8999999999998       9999999987     6899999999885 433332    25789


Q ss_pred             EEEEEeCCceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         111 SFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       111 ~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      +|.|.|++|+|+|+|+|++||++||++|+.++....
T Consensus        80 ~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~k  115 (264)
T 1qqg_A           80 LVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRAK  115 (264)
T ss_dssp             EEEEEESSCEEEEECSSHHHHHHHHHHHHHHC----
T ss_pred             EEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999987554

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*

Probab=99.88  E-value=1.8e-22  Score=175.94  Aligned_cols=102  Identities=21%  Similarity=0.375  Sum_probs=85.0

Q ss_pred             CCceeEEeEEEeeeCCC-CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeE----EEeecchh-hhcCCCcEEEEEe
Q psy7933          43 SPVVSRKGYLNILEQKT-NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQ----VEYSEDQQ-AMVRVPFSFSVVT  116 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~-~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~----V~~~~~~~-~~~~r~~~F~I~t  116 (171)
                      ..+++|+|||.|+|+.. +.||||||||+++.|+||+++.+..++|.|+|..+.    |....... ....++++|.|.|
T Consensus       266 ~~~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t  345 (386)
T 3lju_X          266 SRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVT  345 (386)
T ss_dssp             SCCCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTTCSBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEEC
T ss_pred             ccccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCCCcccceEEEeecceeeeeecccCCccccccCCCcEEEEEe
Confidence            46789999999999987 899999999999999999999999999999997543    32211111 0011269999999


Q ss_pred             CCceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         117 KHGGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       117 ~~rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      ++|+|+|+|+|++||++||.||+.++..
T Consensus       346 ~~rty~l~A~s~~e~~~Wi~aL~~~i~~  373 (386)
T 3lju_X          346 PDRKFLFACETESDQREWVAAFQKAVDR  373 (386)
T ss_dssp             SSCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred             CCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999863

>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A

Probab=99.87  E-value=3.8e-22  Score=172.54  Aligned_cols=95  Identities=14%  Similarity=0.323  Sum_probs=80.1

Q ss_pred             CceeEEeEEEeeeCCC---CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC--
Q psy7933          44 PVVSRKGYLNILEQKT---NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH--  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~---~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~--  118 (171)
                      ..++|+|||.|++...   +.|+||||||+++.|+||++ .+..+.+.|+|..|.|...++.    .|+|||.|+|++  
T Consensus       276 ~~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~-~~~~~~~~i~l~~~~v~~~~~~----~r~~~F~i~t~~~~  350 (385)
T 2q13_A          276 NLTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQAR-GDVAGGLAMDIDNCSVMAVDCE----DRRYCFQITSFDGK  350 (385)
T ss_dssp             CCSCCEEEEEEC--------CCEEEEEEEETTEEEEECS-SCSSCEEEEECTTCEEEEECCT----TCSSEEEEECTTSC
T ss_pred             CCccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecC-CCcCCCceEEccceEEEecccc----CCCceEEEEeCCCC
Confidence            3678999999998752   37999999999999999999 4567889999999988765432    578999999998  


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      ++|+|+|+|++||++||+||+.++.
T Consensus       351 ~~~~l~A~s~~e~~~Wi~ai~~~~~  375 (385)
T 2q13_A          351 KSSILQAESKKDHEEWICTINNISK  375 (385)
T ss_dssp             BCCCEECSSHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEeCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999864

>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}

Probab=99.86  E-value=3.5e-21  Score=144.73  Aligned_cols=93  Identities=16%  Similarity=0.271  Sum_probs=77.8

Q ss_pred             eEEeEEE-----eeeCC--CCCceEEEEEEeCCcEEEecCCC---------CCccceEEECCCeEEEeecchhhhcCCCc
Q psy7933          47 SRKGYLN-----ILEQK--TNGWKKRWVAVRRPYVFIFRDEK---------DPVERALVNLATAQVEYSEDQQAMVRVPF  110 (171)
Q Consensus        47 ~k~GwL~-----K~g~~--~~~WkrRWFVL~~~~L~yYk~~~---------d~~~~g~I~L~~~~V~~~~~~~~~~~r~~  110 (171)
                      ..+|+|.     |.|.+  .++|+||||||.++.|+||+...         +.+|.+.|+|.++.|+..++    ..++|
T Consensus         2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~e~----~~~~~   77 (126)
T 2dtc_A            2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPDD----PEHPD   77 (126)
T ss_dssp             CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECCCC----TTSTT
T ss_pred             ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEEecCC----CCCCC
Confidence            3566666     44654  46999999999999999999663         55889999999999985443    35899


Q ss_pred             EEEEEeC--CceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         111 SFSVVTK--HGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       111 ~F~I~t~--~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +|+|.++  +..|.|+|+|+++|++||+||..++.
T Consensus        78 ~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~  112 (126)
T 2dtc_A           78 IFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACK  112 (126)
T ss_dssp             EEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             EEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence            9999976  57799999999999999999999885

>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}

Probab=99.86  E-value=5.7e-22  Score=172.55  Aligned_cols=96  Identities=19%  Similarity=0.372  Sum_probs=81.9

Q ss_pred             CceeEEeEEEeee---CCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC--
Q psy7933          44 PVVSRKGYLNILE---QKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH--  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g---~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~--  118 (171)
                      ..+.|+|||+|++   ...+.|+||||||+++.|+||+.... .+.+.|+|..|.|...++.    .|+|||+|+|++  
T Consensus       299 ~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~~-~~~~~~~l~~~~v~~~~~~----~r~~cF~i~~~~~~  373 (407)
T 4h8s_A          299 NLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAV-AGGLIQDLDNCSVMAVDCE----DRRYCFQITTPNGK  373 (407)
T ss_dssp             SCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTCS-SCCCCBCSSCCEEEEECCT----TCSSEEEEECTTSS
T ss_pred             CcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCCC-CCCeEEECCceEEEECCCC----CCCceEEEEecCCC
Confidence            3577999999984   34569999999999999999997654 6788899999998765543    478999999975  


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      ++|+|+|+|++||++||.||+.++..
T Consensus       374 ~~~~l~A~s~~e~~~Wi~ai~~a~~~  399 (407)
T 4h8s_A          374 SGIILQAESRKENEEWICAINNISRQ  399 (407)
T ss_dssp             CCEEEECSSSHHHHHHHHHHHHHHSC
T ss_pred             ceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence            68999999999999999999998753

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*

Probab=99.85  E-value=1.9e-21  Score=169.37  Aligned_cols=97  Identities=12%  Similarity=0.260  Sum_probs=81.6

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEE--eCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEE----eCC
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAV--RRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVV----TKH  118 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL--~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~----t~~  118 (171)
                      ..+|+|||.|+|+..+.||||||||  +++.|+||+++++.+++|.|.|.++.+...++.   .+++++|.|.    ++.
T Consensus       145 ~~~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~~~~p~g~I~L~~~~~~~~~~~---~~~~~~f~I~~~~~~~~  221 (386)
T 3lju_X          145 AGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAK---IGHPHGLQVTYLKDNST  221 (386)
T ss_dssp             SSEEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC-----CCSEEEEGGGEEEEECHHH---HTSTTCEEEEEEETTEE
T ss_pred             ccccccceeeeccccCCceEEEEEEEcCCCEEEEECCCCccCcccEEEeeccEEEEcccc---cCCCceEEEEEecCCCc
Confidence            4689999999999999999999999  899999999999999999999999876654432   3689999998    778


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      |+|+|+|+|.+||++||++|+.+...
T Consensus       222 R~y~l~A~s~~e~~~Wi~aIr~a~~~  247 (386)
T 3lju_X          222 RNIFIYHEDGKEIVDWFNALRAARFH  247 (386)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEcCCHHHHHHHHHhhhhcccc
Confidence            99999999999999999999987543

>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}

Probab=99.84  E-value=9.6e-21  Score=156.29  Aligned_cols=102  Identities=18%  Similarity=0.289  Sum_probs=82.0

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECC---CeEEEeecchhh--hcCCCcEEEEEeCC
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLA---TAQVEYSEDQQA--MVRVPFSFSVVTKH  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~---~~~V~~~~~~~~--~~~r~~~F~I~t~~  118 (171)
                      ..+.++|||+|+++..+.|+||||||+++.|+||+++.+..+.+.|.|.   .+.|........  -..++|||.|.+++
T Consensus       166 ~~p~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~  245 (291)
T 3tca_A          166 IVPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQ  245 (291)
T ss_dssp             CCCCCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTT
T ss_pred             CCCceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCccccccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCC
Confidence            4567999999999999999999999999999999999988888776654   455544332211  12468999999853


Q ss_pred             ------ceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         119 ------GGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       119 ------rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                            ++|+|+|+|++||.+||.||+.+..|.
T Consensus       246 ~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak~g~  278 (291)
T 3tca_A          246 IQKESQYIKYLCCDDARTLSQWVMGIRIAKYGK  278 (291)
T ss_dssp             CCSCCTTSEEEECSSHHHHHHHHHHHHHHHHTH
T ss_pred             CCCCCceEEEEECCCHHHHHHHHHHHHHHhcch
Confidence                  669999999999999999999876544

>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1

Probab=99.81  E-value=2.9e-19  Score=137.65  Aligned_cols=95  Identities=12%  Similarity=0.299  Sum_probs=79.4

Q ss_pred             eEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCC---------C-------------------------Cc--------
Q psy7933          47 SRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEK---------D-------------------------PV--------   84 (171)
Q Consensus        47 ~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~---------d-------------------------~~--------   84 (171)
                      +|+|||+|+++..+.|++|||||.++.|||++...         +                         ..        
T Consensus         2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l~E   81 (150)
T 2fjl_A            2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHLDE   81 (150)
T ss_dssp             CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSSCT
T ss_pred             CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcccc
Confidence            59999999999999999999999999999988111         0                         01        


Q ss_pred             -------cceEEECCCeEEEeecchhhhcCCCcEEEEEeCC---ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933          85 -------ERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH---GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus        85 -------~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~---rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                             .+|.|+|.+|.|+..++.+  .+++|+|+|.+++   ++|.|.|+|++||.+||++|++++.
T Consensus        82 ~~~lG~l~kG~IdL~gc~V~~~~~~~--~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~  148 (150)
T 2fjl_A           82 NSPLGDLLRGVLDVPACQIAIRPEGK--NNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ  148 (150)
T ss_dssp             TTTTTTCCCEEECSTTCEEEEETTCS--SSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred             cccccccccceEecCccEEEeccCCC--CCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence                   1799999999998765421  3589999999874   5899999999999999999999863

>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=1.2e-18  Score=132.29  Aligned_cols=97  Identities=12%  Similarity=0.303  Sum_probs=82.3

Q ss_pred             ceeEEeEEEeeeCCC---CCceEEEEEEeCCcEEEecCCCCC--ccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-
Q psy7933          45 VVSRKGYLNILEQKT---NGWKKRWVAVRRPYVFIFRDEKDP--VERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-  118 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~---~~WkrRWFVL~~~~L~yYk~~~d~--~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-  118 (171)
                      .+.+++||...++..   +.||+|||||++..|+|||+..+.  +|.|.|+|.+|.|..++..   ..++|.|.+..+. 
T Consensus         8 ~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~~~ePig~I~L~gceV~pd~~~---~~~kf~ikl~iPs~   84 (137)
T 2ys3_A            8 IPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKGCEVVPDVNV---SGQKFCIKLLVPSP   84 (137)
T ss_dssp             CCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTTTSCCSCCBCTTTCEEEECCBG---GGTBEEEEEEEECS
T ss_pred             CcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhccCCCceEEECCCCEEeccccc---cCCceEEEEEccCC
Confidence            456889999888654   489999999999999999998886  8999999999998876543   2568888877653 


Q ss_pred             ---ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         119 ---GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       119 ---rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                         ++|+|.|+|++++.+||.|++.+.-|
T Consensus        85 ~g~r~y~l~cdsEeqy~~WMaA~rlAskg  113 (137)
T 2ys3_A           85 EGMSEIYLRCQDEQQYARWMAGCRLASKG  113 (137)
T ss_dssp             SSEEEEEEEESSHHHHHHHHHHHHHHHTS
T ss_pred             CCceEEEEECCCHHHHHHHHHHHHHhccC
Confidence               89999999999999999999987655

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.76  E-value=7.1e-19  Score=152.74  Aligned_cols=103  Identities=15%  Similarity=0.253  Sum_probs=75.2

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEe-CCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCc-eE
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVR-RPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHG-GY  121 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~-~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~r-t~  121 (171)
                      ..++|+|||.|+|+..++||||||||+ ++.|+|||++.+..+.|.|+|.++++..+........++++|.|.+.+. .+
T Consensus         4 ~~v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~~~~   83 (446)
T 4ejn_A            4 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTV   83 (446)
T ss_dssp             CCEEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEEEEECSSSTTEEEEEEEETTEE
T ss_pred             ceEEEEeeEEeeccccccccceEEEEeeCCEEEEEecCCCCCccCcccccCccccceeecCCCCCCCceeEEEcCCCcee
Confidence            468999999999999999999999998 7999999999998889999998754321110000124689999987643 33


Q ss_pred             ---EEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         122 ---LMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       122 ---~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                         .|.|++.+++++|+.||+.++.+..
T Consensus        84 ~~r~~~~~~~ee~e~W~~ai~~~i~~~~  111 (446)
T 4ejn_A           84 IERTFHVETPEEREEWTTAIQTVADGLK  111 (446)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHCCC--
T ss_pred             eeeEEecCCHHHHHHHHHHHHhhhhhhh
Confidence               7999999999999999999976544

>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}

Probab=99.75  E-value=2.3e-18  Score=127.26  Aligned_cols=96  Identities=16%  Similarity=0.382  Sum_probs=74.4

Q ss_pred             EEeEEEe--eeCCCC-CceEEEEEEeCCcEEEecCCCCC---ccceEEECCCeE-EEeecchhhh----cCCCcEEEEEe
Q psy7933          48 RKGYLNI--LEQKTN-GWKKRWVAVRRPYVFIFRDEKDP---VERALVNLATAQ-VEYSEDQQAM----VRVPFSFSVVT  116 (171)
Q Consensus        48 k~GwL~K--~g~~~~-~WkrRWFVL~~~~L~yYk~~~d~---~~~g~I~L~~~~-V~~~~~~~~~----~~r~~~F~I~t  116 (171)
                      .+|||.+  +++..+ +|+||||||.+..|+||+++.+.   .+.+.|+|..+. |......+..    ...|+.|.|.+
T Consensus         3 ~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~   82 (117)
T 2rov_A            3 LEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILY   82 (117)
T ss_dssp             SEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEE
T ss_pred             eEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEEEEe
Confidence            5899986  777777 99999999999999999987643   789999996543 3322111100    12478999986


Q ss_pred             C------CceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         117 K------HGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       117 ~------~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .      .++|+|.|+|++|+++||.+|+..+.
T Consensus        83 ~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~  115 (117)
T 2rov_A           83 ANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP  115 (117)
T ss_dssp             CSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred             CCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence            3      58999999999999999999998763

>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}

Probab=99.75  E-value=1.6e-18  Score=145.56  Aligned_cols=99  Identities=21%  Similarity=0.450  Sum_probs=79.4

Q ss_pred             CceeEEeEEEee-----eC-------CCCCceEEEEEEeCCcEEEecCCCC------CccceEEECCCeEEEeecchhhh
Q psy7933          44 PVVSRKGYLNIL-----EQ-------KTNGWKKRWVAVRRPYVFIFRDEKD------PVERALVNLATAQVEYSEDQQAM  105 (171)
Q Consensus        44 ~~v~k~GwL~K~-----g~-------~~~~WkrRWFVL~~~~L~yYk~~~d------~~~~g~I~L~~~~V~~~~~~~~~  105 (171)
                      ..+.|+|||.++     +.       ..+.|++|||||+++.|+||+++..      ..+.+.|+|.++.++..++.   
T Consensus         9 ~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~d~---   85 (279)
T 3a8n_A            9 GTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEH---   85 (279)
T ss_dssp             -CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCTTS---
T ss_pred             CceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEecccc---
Confidence            467899999764     21       2459999999999999999998864      35678899999988754432   


Q ss_pred             cCCCcEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         106 VRVPFSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       106 ~~r~~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      .+++|+|.|.+++ +.|+|+|++++||++||++|+.+++..
T Consensus        86 ~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~~  126 (279)
T 3a8n_A           86 PKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAA  126 (279)
T ss_dssp             SSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence            3689999999864 779999999999999999999988643

>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=2.4e-17  Score=123.32  Aligned_cols=101  Identities=20%  Similarity=0.306  Sum_probs=79.9

Q ss_pred             CCceeEEeEEEeeeC--CCCCceEEEEEEeCC------cEEEecCCCCC----ccceEEECCCe-EEEeecchhhhcCCC
Q psy7933          43 SPVVSRKGYLNILEQ--KTNGWKKRWVAVRRP------YVFIFRDEKDP----VERALVNLATA-QVEYSEDQQAMVRVP  109 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~--~~~~WkrRWFVL~~~------~L~yYk~~~d~----~~~g~I~L~~~-~V~~~~~~~~~~~r~  109 (171)
                      ...++|+|||+++..  .++.||||||||...      .|.||++++..    .++.+|.|.+| .|........-.+..
T Consensus         9 ~e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~   88 (127)
T 2d9w_A            9 GDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDT   88 (127)
T ss_dssp             CCCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSSC
T ss_pred             cCccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCCcc
Confidence            468899999999984  556899999999764      59999987653    57899999987 454432210112456


Q ss_pred             cEEEEEeCCceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         110 FSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       110 ~~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      ++|.|.|++++|+|+|++. |+.+||++|.++.+.
T Consensus        89 ~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~aF~  122 (127)
T 2d9w_A           89 SAFFLETKERLYLLAAPAA-ERGDWVQAICLLAFS  122 (127)
T ss_dssp             EEEEEEESSCEEEEEECHH-HHHHHHHHHHHHHTS
T ss_pred             eEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHHhcC
Confidence            8999999999999999975 999999999998763

>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}

Probab=99.71  E-value=2.1e-16  Score=131.26  Aligned_cols=104  Identities=17%  Similarity=0.284  Sum_probs=84.0

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceE---EECCCeEEEeecchhhhc--CCCcEEEEEeC
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERAL---VNLATAQVEYSEDQQAMV--RVPFSFSVVTK  117 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~---I~L~~~~V~~~~~~~~~~--~r~~~F~I~t~  117 (171)
                      +..+..+|||.++++..+.|+||||||+++.||||+..+...+++.   ++|.++.|-...+.....  -.++||+|.++
T Consensus       129 s~~P~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~  208 (256)
T 3hk0_A          129 SSSPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPN  208 (256)
T ss_dssp             TSCEEEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTTCCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEET
T ss_pred             CCCCcceeEEEEecCCCCcceEEEEEEeCCEEEEEecCCCCccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEcc
Confidence            4567899999999999999999999999999999998876566654   789998886544322111  14799999965


Q ss_pred             C------ceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         118 H------GGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       118 ~------rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      .      ..++|+|+++++|.+||.||..+..|..
T Consensus       209 k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~g~~  243 (256)
T 3hk0_A          209 KVRNETKELRLLCAEDEQTRTSWMTAFRLLKYGML  243 (256)
T ss_dssp             TCSSCCTTCEEEEESSHHHHHHHHHHHHHHHHTHH
T ss_pred             cccCCCceEEEEEeCCHHHHHHHHHHHHHHHhhHH
Confidence            3      3599999999999999999999987765

>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A

Probab=99.64  E-value=1.4e-15  Score=127.73  Aligned_cols=103  Identities=18%  Similarity=0.327  Sum_probs=76.7

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCcc---ceEEECCCeEEEeecchhhh--cCCCcEEEEEeC-
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVE---RALVNLATAQVEYSEDQQAM--VRVPFSFSVVTK-  117 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~---~g~I~L~~~~V~~~~~~~~~--~~r~~~F~I~t~-  117 (171)
                      ..+.++|||++++...+.|+||||||+++.||||+..++..+   .+.++|.++.|-...+....  .-.+|||+|..+ 
T Consensus       156 ~~pe~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~  235 (281)
T 4gmv_A          156 TVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQ  235 (281)
T ss_dssp             CCCCCEEEEEEECTTSSCEEEEEEEECSSCEEEC---------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTT
T ss_pred             CCCccEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCCCCccccceEEEEcCCcEEEEecccccccCCCCCcEEEEecCc
Confidence            456799999999998899999999999999999987655444   45668888887654322111  124899999964 


Q ss_pred             -----CceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         118 -----HGGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       118 -----~rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                           ...++|+|++++++..||.||.-+..|..
T Consensus       236 ~~~~~~~~~~~caede~~~~~Wv~Air~ak~g~~  269 (281)
T 4gmv_A          236 IQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYGKQ  269 (281)
T ss_dssp             CCSCCTTCEEEECSSHHHHHHHHHHHHHHHHTHH
T ss_pred             cCCCCCceEEEEeCCHHHHHHHHHHHHHHhhCcH
Confidence                 35799999999999999999998877654

>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A

Probab=99.63  E-value=2.3e-15  Score=115.89  Aligned_cols=91  Identities=13%  Similarity=0.157  Sum_probs=78.3

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCC-eEEEeecchhhhcCCCcEEEEEeCCceE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLAT-AQVEYSEDQQAMVRVPFSFSVVTKHGGY  121 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~-~~V~~~~~~~~~~~r~~~F~I~t~~rt~  121 (171)
                      ...++++|+|.|+.+  ..|++|||+|.+.-.+||-++.....+|.|++.. +.|+..        ....|.|.|++|+|
T Consensus        49 ge~Ilk~G~v~KrkG--l~~kkR~liLT~~PrL~Yvdp~~~~~KGeIpls~~l~ve~k--------~~~~F~I~Tp~RtY  118 (151)
T 1w1g_A           49 NNLILKMGPVDKRKG--LFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEAK--------NFKTFFVHTPNRTY  118 (151)
T ss_dssp             TCCEEEEEEEEEEET--TEEEEEEEEEETTTEEEEEETTTTEEEEEECCCTTCEEEES--------SSSEEEEEETTEEE
T ss_pred             CCcEEEEEEEEeccc--CcceeEEEEEcCCceEEEEcCccccccceEecCCCeeEEEc--------CCCEEEEECCCceE
Confidence            568999999999765  4499999999999999999999889999999984 456542        24589999999999


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      +|.|. ..++++|++||+.++.-
T Consensus       119 ~~~d~-~~~AqeWv~aI~~~~~~  140 (151)
T 1w1g_A          119 YLMDP-SGNAHKWCRKIQEVWRQ  140 (151)
T ss_dssp             EEECT-TSCHHHHHHHHHHHHHH
T ss_pred             EEEcC-ccCHHHHHHHHHHHHHH
Confidence            99997 88999999999998853

>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=99.59  E-value=1.2e-14  Score=108.40  Aligned_cols=101  Identities=20%  Similarity=0.273  Sum_probs=84.5

Q ss_pred             cCCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCe-EEEeecchhh--hcCCCcEEEEEeCC
Q psy7933          42 ISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATA-QVEYSEDQQA--MVRVPFSFSVVTKH  118 (171)
Q Consensus        42 ~~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~-~V~~~~~~~~--~~~r~~~F~I~t~~  118 (171)
                      ++..++|+|||.+.+...+.|||+|++|....|.||+++.+.+....|+|..+ .|+...+...  ...++|||+|.|.+
T Consensus         4 ~~s~vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e~~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~   83 (125)
T 2coa_A            4 GSSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTAN   83 (125)
T ss_dssp             CCCSCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSS
T ss_pred             CCCceeecceEEEEccCCccccceeeEecCCeEEEEecCCCCceeeeeehhHeecccccccccccCCCCCCceEEEEeCC
Confidence            46789999999999999999999999999999999999999999999999987 4444322211  01367999999999


Q ss_pred             ceEEEEeC-----------CHHHHHHHHHHHHHHh
Q psy7933         119 GGYLMQTA-----------GAREVHEWLYAINPLL  142 (171)
Q Consensus       119 rt~~f~A~-----------s~~E~~~WI~aI~~~~  142 (171)
                      .+|++.++           ..+.+..|..||++++
T Consensus        84 ~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL  118 (125)
T 2coa_A           84 ATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL  118 (125)
T ss_dssp             CCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred             eEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence            99999984           1367999999999986

>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=1.1e-13  Score=103.64  Aligned_cols=101  Identities=16%  Similarity=0.246  Sum_probs=84.6

Q ss_pred             cCCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeE-EEeecchhhh--cCCCcEEEEEeCC
Q psy7933          42 ISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQ-VEYSEDQQAM--VRVPFSFSVVTKH  118 (171)
Q Consensus        42 ~~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~-V~~~~~~~~~--~~r~~~F~I~t~~  118 (171)
                      ++..++|+|||.+.+...+.|||+|++|....|.+|+++.+.+....|+|..+. |+...+...+  ...+|||+|.|.+
T Consensus         4 ~~s~vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~~   83 (129)
T 2d9z_A            4 GSSGMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDT   83 (129)
T ss_dssp             CCTTSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECSS
T ss_pred             CCCceeecceEEEEccCCccccceeeEecCCeEEEEecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEEEECC
Confidence            467899999999999999999999999999999999999999999999999874 3332221100  1256999999999


Q ss_pred             ceEEEEeCC---------------HHHHHHHHHHHHHHh
Q psy7933         119 GGYLMQTAG---------------AREVHEWLYAINPLL  142 (171)
Q Consensus       119 rt~~f~A~s---------------~~E~~~WI~aI~~~~  142 (171)
                      .+|++.++.               .+.+..|..||++++
T Consensus        84 ~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqAL  122 (129)
T 2d9z_A           84 MVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQAL  122 (129)
T ss_dssp             CEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHH
T ss_pred             EEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhc
Confidence            999998853               799999999999986

>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*

Probab=99.53  E-value=8.4e-14  Score=108.56  Aligned_cols=97  Identities=12%  Similarity=0.317  Sum_probs=78.3

Q ss_pred             eeEEeEEEeeeCC---CCCceEEEEEEeCCcEEEecCCCC--CccceEEECCCeEEEeecchhhhcCCCcEEEEEe----
Q psy7933          46 VSRKGYLNILEQK---TNGWKKRWVAVRRPYVFIFRDEKD--PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVT----  116 (171)
Q Consensus        46 v~k~GwL~K~g~~---~~~WkrRWFVL~~~~L~yYk~~~d--~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t----  116 (171)
                      +...+||....+.   .++||+||||+++..|+|||++.+  ..|.+.|+|.+|.|..+....   ..+|.+.+.-    
T Consensus        47 PeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~~geP~~~I~LrGCEVtpDVnva---~~Kf~IkL~vP~~~  123 (173)
T 4f7h_A           47 PELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNIS---GQKFNIKLLIPVAE  123 (173)
T ss_dssp             TCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGCSSCCSEEEECTTCEEEEEEETT---TTEEEEEEEEEETT
T ss_pred             hhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHhcCCCceEEecCceEEecccccc---ccceeEEEeccCCC
Confidence            3477999776653   469999999999999999999887  679999999999998765432   4456666543    


Q ss_pred             CCceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         117 KHGGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       117 ~~rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      +...|+|.|++++++..|+.|..-+..|.
T Consensus       124 gm~e~~Lrcd~E~qya~WMAAcrLAskGk  152 (173)
T 4f7h_A          124 GMNEIWLRCDNEKQYAHWMAACRLASKGK  152 (173)
T ss_dssp             EEEEEEEEESSHHHHHHHHHHHHHHHTTC
T ss_pred             CcceeeeecCCHHHHHHHHHHhhhhccCC
Confidence            34779999999999999999998776654

>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}

Probab=99.49  E-value=2.8e-13  Score=104.74  Aligned_cols=98  Identities=11%  Similarity=0.218  Sum_probs=76.6

Q ss_pred             ceeEEeEEEeeeC---CCCCceEEEEEEeCCcEEEecCCCC--CccceEEECCCeEEEeecchhhhcCCCcEEEEEeC--
Q psy7933          45 VVSRKGYLNILEQ---KTNGWKKRWVAVRRPYVFIFRDEKD--PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK--  117 (171)
Q Consensus        45 ~v~k~GwL~K~g~---~~~~WkrRWFVL~~~~L~yYk~~~d--~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~--  117 (171)
                      .+...+||....+   ..++||+||||+++..|+|||++.|  ..+.+.|+|.+|.|..+....   +.+|.|.+.-+  
T Consensus        25 iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~~geP~~~inLrGCEVtPDVnva---~~Kf~ikL~ip~~  101 (165)
T 4bbk_A           25 IPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELEQGEPIEKLNLRGCEIVPDVNVS---GRKFGIKLLIPVA  101 (165)
T ss_dssp             -CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGTTSCCSEEEECTTCEEEEEEETT---TTEEEEEEEEEET
T ss_pred             ChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHhcCCCceEEecCccEEecccccc---cceeeEEEecCCC
Confidence            4457899987664   3469999999999999999999887  568999999999988654432   45677777433  


Q ss_pred             --CceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         118 --HGGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       118 --~rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                        ...++|.|+++.++..|+.|+.-+..|.
T Consensus       102 ~gm~e~~LrcdsE~QYa~WMAAcrLAskGk  131 (165)
T 4bbk_A          102 DGMNEVYLRCDHEDQYARWMAACILASKGK  131 (165)
T ss_dssp             TEEEEEEEEESSHHHHHHHHHHHHHHHTTC
T ss_pred             CcceeeeeecCCHHHHHHHHHHhhhccccc
Confidence              4679999999999999999998776653

>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=99.09  E-value=4e-10  Score=84.71  Aligned_cols=99  Identities=19%  Similarity=0.306  Sum_probs=76.1

Q ss_pred             ceeEEeEEEeeeC--------CCCCceEEEEEEeC------CcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCc
Q psy7933          45 VVSRKGYLNILEQ--------KTNGWKKRWVAVRR------PYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPF  110 (171)
Q Consensus        45 ~v~k~GwL~K~g~--------~~~~WkrRWFVL~~------~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~  110 (171)
                      .+.|+|-|.-..+        ....|+|+|+||+.      ..|.||..++..+++..|++..+.-+.....-.|..+.|
T Consensus        17 e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~~i~cs~I~EVR~tt~LEmPD~~n   96 (136)
T 1v5m_A           17 DIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKDN   96 (136)
T ss_dssp             SCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTCCBCCCCCCSSSCCCTT
T ss_pred             eeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCcccCCccccchhhhhhhhhccccccCCccc
Confidence            5668888865442        33499999999974      247799999999999999988763222111112456789


Q ss_pred             EEEEEeCCc-eEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         111 SFSVVTKHG-GYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       111 ~F~I~t~~r-t~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .|.|.+.++ .|+|.|.++.+|+.||..|+..+.
T Consensus        97 TFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~  130 (136)
T 1v5m_A           97 TFVLKVENGAEYILETIDSLQKHSWVADIQGCVD  130 (136)
T ss_dssp             EECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcC
Confidence            999999887 699999999999999999988765

>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*

Probab=98.97  E-value=2e-08  Score=73.37  Aligned_cols=101  Identities=14%  Similarity=0.069  Sum_probs=78.1

Q ss_pred             CCceeEEeEEEeeeCCCC-CceEEEEEEeCCcEEEecCCCC----CccceEEECCCeEEEeecchhhhcCCCcEEEEEeC
Q psy7933          43 SPVVSRKGYLNILEQKTN-GWKKRWVAVRRPYVFIFRDEKD----PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK  117 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~-~WkrRWFVL~~~~L~yYk~~~d----~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~  117 (171)
                      +...+++|.|.+...... .=++++|.|-++.|.|-.-...    ..-...++|.++.|+..++..   .-+|+|.|.+.
T Consensus         5 gR~lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~d~~---~~~n~f~i~~~   81 (113)
T 1zc3_B            5 GQYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNP---PMKDMFKLLMF   81 (113)
T ss_dssp             CCCEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBT---TBSSEEEEEET
T ss_pred             CeEEEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEEECCCCc---ccceEEEEEeC
Confidence            457889999998875443 4456889999998877764222    233456899999887655533   46899999999


Q ss_pred             CceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         118 HGGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       118 ~rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      .++|.|+|++.+|..+||.+|++++...+
T Consensus        82 ~~s~~~~aes~~eK~~Wl~~~~~a~~~~~  110 (113)
T 1zc3_B           82 PESRIFQAENAKIKREWLEVLEETKRALS  110 (113)
T ss_dssp             TEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999876544

>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}

Probab=98.91  E-value=8.9e-09  Score=83.50  Aligned_cols=100  Identities=16%  Similarity=0.370  Sum_probs=77.7

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCC-------cEEEecCCCC----CccceEEECCCe-EEEeecchhhhcCCCc
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRP-------YVFIFRDEKD----PVERALVNLATA-QVEYSEDQQAMVRVPF  110 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~-------~L~yYk~~~d----~~~~g~I~L~~~-~V~~~~~~~~~~~r~~  110 (171)
                      .+.++.+|++..+.  +|.||+||+||+..       .|..||+..|    ..++.+|.|.++ .++..-.   +.++.|
T Consensus         6 ~~~~v~eg~vk~r~--~KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~GlE~g~~---ldk~s~   80 (224)
T 3ml4_A            6 TEAALVEGQVKLRD--GKKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGLEPALP---YEGLAH   80 (224)
T ss_dssp             -CCCSEEEEEEEC-----CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEEEEEEE---ETTEEE
T ss_pred             ccceeEEEeeeeec--CCceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCcccccc---ccCccc
Confidence            45778899997755  45999999999862       4889998876    467889999875 4444433   236789


Q ss_pred             EEEEEeCCceEEEEeCCHHHHHHHHHHHHHHhhhhhh
Q psy7933         111 SFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIR  147 (171)
Q Consensus       111 ~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~~~~~  147 (171)
                      +++|++.+.+..|.++++++|.+|-..|........+
T Consensus        81 TlAIIc~d~~~vLAFds~e~l~~W~~~l~~slGe~~r  117 (224)
T 3ml4_A           81 TLAIICLSQAVMLGFDSHEAMCAWDTRIRYALGEVHR  117 (224)
T ss_dssp             EEEEEESSCEEEEECSSHHHHHHHHHHHHHHTSSEEE
T ss_pred             EEEEEecCcEEEEEeCCHHHHHHHHHHHhhccCCCce
Confidence            9999999999999999999999999999987755433

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}

Probab=98.79  E-value=7.6e-09  Score=83.48  Aligned_cols=47  Identities=17%  Similarity=0.455  Sum_probs=39.0

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALV   89 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I   89 (171)
                      .+.+.++|||.|+|+..++||||||||+++.|.||+...+..-.|.+
T Consensus        18 ~~~~~~~g~l~~~~~~~~~w~~rw~vl~~~~~~~~~~~~~~~k~G~L   64 (228)
T 3tfm_A           18 PGSPYFHSFLYMNGGLMNSWKRRWCVLKDETFLWFRSKQEALKQGWL   64 (228)
T ss_dssp             ---CCEEEEEEECCTTTCCCEEEEEEEETTEEEEESSCCCSSEEEEE
T ss_pred             CCCCceEEEEeecCcccccceEEEEEEeCCEEEEeccCCCcceEEEE
Confidence            46788999999999999999999999999999999988765555544

>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=98.68  E-value=9e-08  Score=71.99  Aligned_cols=95  Identities=9%  Similarity=0.154  Sum_probs=70.8

Q ss_pred             eeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCC---CCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ceE
Q psy7933          46 VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEK---DPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GGY  121 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~---d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt~  121 (171)
                      ++.-|-+..+......=+.|+|+|-.+.|.|.+...   .-.-.|.|+|.++.|...++.   ...+|+|+|..+. +++
T Consensus        28 ii~~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~~V~~~ed~---~~~~~aFeI~g~~~~~i  104 (132)
T 1v61_A           28 VIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEI---EGSDCMFEITGSTVERI  104 (132)
T ss_dssp             CSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTCBCSTTCSS---SSSCCCEEEECSSSCEE
T ss_pred             eEEEeeEEEEEcccCcceEEEEEEcCCeEEEEEecCCCceEEEEEEEecceeEEEecccc---ccCccEEEEecCCCceE
Confidence            333343433332233446899999999998887432   235579999999988654443   2578999999886 889


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .|.|.|.+|+++||.+|+.++.
T Consensus       105 ~v~~~s~eE~~~Wl~~L~~~i~  126 (132)
T 1v61_A          105 VVHCNNNQDFQEWMEQLNRLTK  126 (132)
T ss_dssp             EECCCCSHHHHHHHHHHHHHHT
T ss_pred             EEEeCCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999875

>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}

Probab=98.65  E-value=1.2e-07  Score=82.13  Aligned_cols=98  Identities=14%  Similarity=0.238  Sum_probs=72.2

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC--CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCce
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD--PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGG  120 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d--~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt  120 (171)
                      ....+++|.|.+..+  +.++.|||.|-++.|.|.+..++  ..-++.|+|.++.|....+.    ..+|.|.|.++.++
T Consensus       241 ~r~li~~g~l~~~~~--~~~~~r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L~~l~v~~~~~~----~~~~~f~i~~~~~~  314 (434)
T 3mpx_A          241 GREFLKEGTLMKVTG--KNRRPRHLFLMNDVLLYTYPQKDGKYRLKNTLAVANMKVSRPVME----KVPYALKIETSESC  314 (434)
T ss_dssp             TCCEEECCEEEEEET--TEEEEEEEEEESSEEEEEEECTTSCEEEEEEEEC-----CCCCCT----TSCSEEEEECSSCE
T ss_pred             CcceEecceEEEEeC--CCceEEEEEEECCEEEEEEecCCCeEEEEEEEEcCCcEEEecCCC----CCCeeEEEecCCeE
Confidence            456789999988764  35889999999999999985443  23568899999888543321    46899999999999


Q ss_pred             EEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         121 YLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       121 ~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      |.|+|.|.+|+++|+++|+.++....
T Consensus       315 ~~l~a~s~~ek~~W~~~i~~ai~e~~  340 (434)
T 3mpx_A          315 LMLSASSCAERDEWYGCLSRALPEDY  340 (434)
T ss_dssp             EEEECSSHHHHHHHHHHHHHC-----
T ss_pred             EEEecCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999987643

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=98.48  E-value=1.8e-06  Score=74.43  Aligned_cols=103  Identities=16%  Similarity=0.159  Sum_probs=76.6

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC-CccceEEECCCeEEEeecchh-hhcCCCcEEEEEe--CCc
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD-PVERALVNLATAQVEYSEDQQ-AMVRVPFSFSVVT--KHG  119 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d-~~~~g~I~L~~~~V~~~~~~~-~~~~r~~~F~I~t--~~r  119 (171)
                      ...+++|.|.+.....+.++.|++.|-++.|.+-+...+ ..-++.|+|..+.|...++.+ ....-++.|.|.+  +.+
T Consensus       232 grli~~G~l~~~~~~~~~~~~~~~fLF~d~Ll~~k~k~~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~  311 (406)
T 2vrw_B          232 GRPKIDGELKITSVERRSKTDRYAFLLDKALLICKRRGDSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQ  311 (406)
T ss_dssp             CSEEEEEEEEEECSSCCSCEEEEEEEESSEEEEEEEETTEEEEEEEEETTTEEEEC--------CTTCEEEEEEETTCSC
T ss_pred             CcccccccEEEEecCCCccceEEEEecCCEEEEEEecCCceEEEEEecccceeeeecCCCCccCCccceeeEEEecCCCc
Confidence            347899999887655567899999999999988876433 234678999998886544321 0112368999987  467


Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         120 GYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      .|.|.|.|.+|++.|+++|+.++....
T Consensus       312 ~~~l~a~s~~ek~~W~~~i~~ai~~~~  338 (406)
T 2vrw_B          312 GYELFFKTRELKKKWMEQFEMAISNIY  338 (406)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred             eEEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence            899999999999999999999886544

>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A

Probab=98.44  E-value=1.5e-06  Score=73.45  Aligned_cols=94  Identities=13%  Similarity=0.206  Sum_probs=75.4

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC-----------CccceEEECCCeEEEeecchhhhcCCCcE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD-----------PVERALVNLATAQVEYSEDQQAMVRVPFS  111 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d-----------~~~~g~I~L~~~~V~~~~~~~~~~~r~~~  111 (171)
                      ....+++|-|.+.|    .++.|+|.|-++.|.+-+....           ..-++.|+|.++.|...++.+   .-++.
T Consensus       244 ~r~li~eG~l~~~g----~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~---~~~~~  316 (354)
T 1dbh_A          244 CNEFIMEGTLTRVG----AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN---EYKHA  316 (354)
T ss_dssp             CCCEEEEEEEEETT----CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSS---SCCSE
T ss_pred             cceEEEEeeEEEEe----cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCccc---ccCcc
Confidence            45788999998873    6788999999999988876421           123588999999887654432   34799


Q ss_pred             EEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         112 FSVVTKH-GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       112 F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |.|.+.+ ..|.|+|.|.+|++.|+++|+.++.
T Consensus       317 F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~  349 (354)
T 1dbh_A          317 FEIILKDENSVIFSAKSAEEKNNWMAALISLQY  349 (354)
T ss_dssp             EEECCTTSCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             EEEecCCCCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence            9999875 8899999999999999999999875

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=98.37  E-value=8.4e-06  Score=71.37  Aligned_cols=104  Identities=14%  Similarity=0.105  Sum_probs=79.0

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC----CccceEEECCCeEEEeecchhh---hcCCCcEEEEE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD----PVERALVNLATAQVEYSEDQQA---MVRVPFSFSVV  115 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d----~~~~g~I~L~~~~V~~~~~~~~---~~~r~~~F~I~  115 (171)
                      ....+++|.|.+.....+..+.|+|.|-++.|.|-+....    ..-++.|+|.++.|...++.+.   ...-+++|.|.
T Consensus       331 ~r~li~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~  410 (466)
T 2pz1_A          331 SSELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLH  410 (466)
T ss_dssp             CSCEEEEEEEEEECTTTCCEEEEEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEE
T ss_pred             cceeEEeeeEEEEecCCCCeeEEEEEEECCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeEEEE
Confidence            4578899999988765567889999999999988875421    2346889999988865443210   01236899998


Q ss_pred             eC--CceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         116 TK--HGGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       116 t~--~rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      ..  .+.|.|+|.|.+|++.||++|+..+....
T Consensus       411 ~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~  443 (466)
T 2pz1_A          411 RGATGDSHLLCTRKPEQKQRWLKAFAREREQVQ  443 (466)
T ss_dssp             CSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence            75  56899999999999999999999876433

>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}

Probab=98.36  E-value=6.2e-06  Score=62.54  Aligned_cols=97  Identities=11%  Similarity=0.006  Sum_probs=72.5

Q ss_pred             ceeEEeEEEeeeC----CCCCceEEEEEEeCCcEEEecCC------CCCccceEEECCCeEEEeecchhhhcCCCcEEEE
Q psy7933          45 VVSRKGYLNILEQ----KTNGWKKRWVAVRRPYVFIFRDE------KDPVERALVNLATAQVEYSEDQQAMVRVPFSFSV  114 (171)
Q Consensus        45 ~v~k~GwL~K~g~----~~~~WkrRWFVL~~~~L~yYk~~------~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I  114 (171)
                      ..++.+-|+--.+    ..++=+.|+|.|-++.|.|-|.-      ....-++.++|.+..|...++.    .-||+|.|
T Consensus        12 rlvc~~~l~ev~d~~K~~~kg~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~e----~~p~~~~l   87 (140)
T 3qwm_A           12 RLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQ----YYPNGIRL   87 (140)
T ss_dssp             CEEEEEEEEECSCTTSCCCTTTTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECCS----SCTTEEEE
T ss_pred             eEEEEEeeeeeccCcccccccccceEEEEecchhhheeecccCCCCCceEEEEEeeecceEEEcccCC----CCceEEEE
Confidence            3556666632221    22356899999999999998611      1245678899999999876553    36999999


Q ss_pred             EeCC------ceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         115 VTKH------GGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       115 ~t~~------rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      .++.      +++.|+|++..||..||.+|+..++.-
T Consensus        88 ~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~  124 (140)
T 3qwm_A           88 TSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEV  124 (140)
T ss_dssp             EECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence            9853      669999999999999999999988743

>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}

Probab=98.35  E-value=3.4e-06  Score=72.72  Aligned_cols=96  Identities=7%  Similarity=0.125  Sum_probs=72.7

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC------------------ccceEEECCCeEEEeecchhh
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP------------------VERALVNLATAQVEYSEDQQA  104 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~------------------~~~g~I~L~~~~V~~~~~~~~  104 (171)
                      ....+++|.|.+... .+.++.|+|.|-++.|.|-+...+.                  .-++.|+|.++.|...+    
T Consensus       292 ~r~li~eG~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~----  366 (418)
T 3t06_A          292 TRKMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVA----  366 (418)
T ss_dssp             GSCEEEEEEEEECCB-TTBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECS----
T ss_pred             cceeEEeceEEEEeC-CCCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceecccc----
Confidence            457889999987653 3468899999999999988754321                  12367888888876332    


Q ss_pred             hcCCCcEEEEEeC-----CceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         105 MVRVPFSFSVVTK-----HGGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       105 ~~~r~~~F~I~t~-----~rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                        +-++.|.|...     .+.|.|+|.|.+|++.||++|+.++++.
T Consensus       367 --~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~  410 (418)
T 3t06_A          367 --TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA  410 (418)
T ss_dssp             --SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred             --ccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence              23567777653     3789999999999999999999998743

>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1

Probab=98.32  E-value=7.6e-06  Score=70.65  Aligned_cols=104  Identities=14%  Similarity=0.072  Sum_probs=77.9

Q ss_pred             cCCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC----CccceEEECCCeEEEeecchhh---hcCCCcEEEE
Q psy7933          42 ISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD----PVERALVNLATAQVEYSEDQQA---MVRVPFSFSV  114 (171)
Q Consensus        42 ~~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d----~~~~g~I~L~~~~V~~~~~~~~---~~~r~~~F~I  114 (171)
                      .....+++|.|.+.....+.++.|+|.|-++.|.|-+....    ..-++.|+|.++.|...++.+.   ...-+++|.|
T Consensus       253 ~~r~Li~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i  332 (402)
T 2dfk_A          253 RSSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKL  332 (402)
T ss_dssp             TCCCEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEE
T ss_pred             cccceEEeceEEEEeccCCceEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccceEEEecCCCCccccccccceeEEE
Confidence            35678899999887764557889999999999988885421    2346789999988865443210   0013589999


Q ss_pred             EeC--CceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         115 VTK--HGGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       115 ~t~--~rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      .+.  ...|.|+|.|.+|+..||++|+..+...
T Consensus       333 ~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~  365 (402)
T 2dfk_A          333 HNKETEEVHLFFAKKLEEKIRWLRAFREERKMV  365 (402)
T ss_dssp             EESSSSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence            875  4689999999999999999999876543

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A

Probab=98.31  E-value=4.1e-06  Score=75.76  Aligned_cols=103  Identities=15%  Similarity=0.168  Sum_probs=78.3

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC-CccceEEECCCeEEEeecchh-hhcCCCcEEEEEeCC--c
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD-PVERALVNLATAQVEYSEDQQ-AMVRVPFSFSVVTKH--G  119 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d-~~~~g~I~L~~~~V~~~~~~~-~~~~r~~~F~I~t~~--r  119 (171)
                      ...+++|.|.+.....+.++.|+|.|-++.|.|-+...+ ..-++.|+|.++.|...++.+ ....-++.|.|.+..  +
T Consensus       404 grll~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~  483 (587)
T 3ky9_A          404 GRPKIDGELKITSVERRSKMDRYAFLLDKALLICKRRGDSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQ  483 (587)
T ss_dssp             CCEEEEEEEEEECSSCCSCEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC--
T ss_pred             CceEEEeeEEEEeccCCCcceEEEEEECCEEEEEEecCCEEEeeeeechhhceeeecCCCCcccccccceeEEEEcCCCc
Confidence            347899999988777788999999999999998875533 245788999999887654321 112346899999865  7


Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         120 GYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      .|.|.|.|.+|++.|+++|+.++....
T Consensus       484 ~~~L~A~S~eeK~~Wi~~I~~ai~~~~  510 (587)
T 3ky9_A          484 GYELFFKTRELKKKWMEQFEMAISNIY  510 (587)
T ss_dssp             -CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred             eEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence            899999999999999999999986443

>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}

Probab=98.30  E-value=6e-06  Score=64.88  Aligned_cols=96  Identities=9%  Similarity=0.117  Sum_probs=69.3

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCc-------cceEEECCCeEEEeecchhhhcCCCcEEEEEe
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPV-------ERALVNLATAQVEYSEDQQAMVRVPFSFSVVT  116 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~-------~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t  116 (171)
                      ...+++|-|..+.... .|+.||++|-++.|.|-+...+..       ....|.|..+.|.....     ..+..|.|.+
T Consensus        69 R~Ll~eG~L~~k~~~~-~~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pvi~L~~~~vre~a~-----d~~~~fli~~  142 (185)
T 2lg1_A           69 KKLVRDGSVFLKNAAG-RLKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLKKLIVREVAH-----EEKGLFLISM  142 (185)
T ss_dssp             SCEEEEEEEEEECTTC-CEEEEEEEEESSEEECCEEETTEEECCCCSSSCSEEESSSCEEECCSS-----CSSEEEEECC
T ss_pred             CceeeeceEEEeccCC-CeeeEEEEeecCEEEEEEecCCEEEEEcccCCCCeEeecceEEeccCC-----CCCeEEEEEe
Confidence            5789999998655444 799999999999886664332211       13568888888754332     1334555554


Q ss_pred             C---CceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         117 K---HGGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       117 ~---~rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      .   .+.|.|.|.|.+|++.||++|+.++...
T Consensus       143 ~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~  174 (185)
T 2lg1_A          143 GMTDPEMVEVHASSKEERNSWIQIIQDTINTL  174 (185)
T ss_dssp             SSSCCCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhC
Confidence            3   4789999999999999999999988654

>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A

Probab=98.26  E-value=1e-05  Score=68.58  Aligned_cols=99  Identities=12%  Similarity=0.206  Sum_probs=73.8

Q ss_pred             CceeEEeEEEeeeCC-----------CCCceEEEEEEeCCcEEEecCCCCC----------ccceEEECCCeEEEeecch
Q psy7933          44 PVVSRKGYLNILEQK-----------TNGWKKRWVAVRRPYVFIFRDEKDP----------VERALVNLATAQVEYSEDQ  102 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~-----------~~~WkrRWFVL~~~~L~yYk~~~d~----------~~~g~I~L~~~~V~~~~~~  102 (171)
                      ...+++|.|.+..+.           ...++.|+|.|-++.|.|-+.....          .-++.|+|.++.|....+ 
T Consensus       208 g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~-  286 (353)
T 1kz7_A          208 GKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVK-  286 (353)
T ss_dssp             CCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBT-
T ss_pred             hhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCC-
Confidence            457899998764321           1247899999999999888754321          235678888887754332 


Q ss_pred             hhhcCCCcEEEEEeC--CceEEEEeCCHHHHHHHHHHHHHHhhhhhh
Q psy7933         103 QAMVRVPFSFSVVTK--HGGYLMQTAGAREVHEWLYAINPLLAGQIR  147 (171)
Q Consensus       103 ~~~~~r~~~F~I~t~--~rt~~f~A~s~~E~~~WI~aI~~~~~~~~~  147 (171)
                          +.++.|.|...  ...|.|+|.|.++++.|+++|+.++..+..
T Consensus       287 ----~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~  329 (353)
T 1kz7_A          287 ----GDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQLQ  329 (353)
T ss_dssp             ----TBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence                35789999874  577999999999999999999998876653

>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B

Probab=98.26  E-value=1.1e-07  Score=83.48  Aligned_cols=96  Identities=15%  Similarity=0.113  Sum_probs=0.0

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC-------------------ccceEEECCCeEEEeecchhh
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP-------------------VERALVNLATAQVEYSEDQQA  104 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~-------------------~~~g~I~L~~~~V~~~~~~~~  104 (171)
                      ...+++|.|.|.    +.++.|||.|-++.|.|.+..+..                   .-++.|+|.++.|...++.  
T Consensus       251 r~li~eG~l~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d~--  324 (510)
T 3jzy_A          251 RKLLHSGKLYKT----KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDP--  324 (510)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ceeEEeceEEEc----CCCcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccCCC--
Confidence            356678887764    357899999999999888744321                   1145678888777554332  


Q ss_pred             hcCCCcEEEEEeCCceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         105 MVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       105 ~~~r~~~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                       .+.+++|.|.+..++|.|+|.|.+|+.+|+++|+.++....
T Consensus       325 -~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~  365 (510)
T 3jzy_A          325 -SSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYI  365 (510)
T ss_dssp             ------------------------------------------
T ss_pred             -CccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence             24689999999999999999999999999999999887654

>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1

Probab=98.23  E-value=1.3e-05  Score=59.43  Aligned_cols=97  Identities=12%  Similarity=0.203  Sum_probs=61.7

Q ss_pred             EEeEEEeeeCCCCCceEEEEEEeCCc-EEEecCC--CCCccceEEECCCeE-EEeecchhh------hcCCCcEEEEEeC
Q psy7933          48 RKGYLNILEQKTNGWKKRWVAVRRPY-VFIFRDE--KDPVERALVNLATAQ-VEYSEDQQA------MVRVPFSFSVVTK  117 (171)
Q Consensus        48 k~GwL~K~g~~~~~WkrRWFVL~~~~-L~yYk~~--~d~~~~g~I~L~~~~-V~~~~~~~~------~~~r~~~F~I~t~  117 (171)
                      ++|=.+.+-...+.-+.|+|+|..+. ++||.+.  ......+.|+|.++. |......+.      ......+|.|+..
T Consensus        14 ~~Gt~l~K~~~~~~~k~r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~   93 (131)
T 1mai_A           14 LKGSQLLKVKSSSWRRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFK   93 (131)
T ss_dssp             HHCEEEEEESSSSCEEEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEES
T ss_pred             HcCCeEEEECCCCcceeEEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEEC
Confidence            44544333322222367888888654 4455321  123467899999874 333321110      0124679999887


Q ss_pred             C--ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         118 H--GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       118 ~--rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      +  ++..|.|+|++|++.||..|+.++..
T Consensus        94 ~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~  122 (131)
T 1mai_A           94 DQRNTLDLIAPSPADAQHWVQGLRKIIHH  122 (131)
T ss_dssp             SSCCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred             CCCceEEEEeCCHHHHHHHHHHHHHHHHh
Confidence            5  68999999999999999999998753

>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*

Probab=98.20  E-value=1.7e-05  Score=67.05  Aligned_cols=94  Identities=7%  Similarity=0.127  Sum_probs=70.9

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC------------------ccceEEECCCeEEEeecchhh
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP------------------VERALVNLATAQVEYSEDQQA  104 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~------------------~~~g~I~L~~~~V~~~~~~~~  104 (171)
                      ....+++|.|.++.. .+.++.|+|.|-++.|.|.+...+.                  .-++.|+|.++.|...+    
T Consensus       250 ~R~li~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~----  324 (368)
T 1xcg_A          250 TRKMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVA----  324 (368)
T ss_dssp             GSCEEEEEEEEECCS-SSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECS----
T ss_pred             cceEEeecceEeeec-CCCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeeccc----
Confidence            457889999986543 3468999999999999888754321                  12567888888775422    


Q ss_pred             hcCCCcEEEEEeC-----CceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         105 MVRVPFSFSVVTK-----HGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       105 ~~~r~~~F~I~t~-----~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                        +.++.|.|.+.     .+.|.|+|.|.+|++.|+++|+.++.
T Consensus       325 --~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~  366 (368)
T 1xcg_A          325 --TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR  366 (368)
T ss_dssp             --SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             --CCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHh
Confidence              23578887753     47899999999999999999999875

>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A

Probab=98.17  E-value=2.3e-05  Score=65.08  Aligned_cols=96  Identities=9%  Similarity=0.184  Sum_probs=71.3

Q ss_pred             CceeEEeEEEeeeCC--CCCceEEEEEEeCCcEEEecCCCCC------ccceEEECCCeEEEeecchhhhcCCCcEEEEE
Q psy7933          44 PVVSRKGYLNILEQK--TNGWKKRWVAVRRPYVFIFRDEKDP------VERALVNLATAQVEYSEDQQAMVRVPFSFSVV  115 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~--~~~WkrRWFVL~~~~L~yYk~~~d~------~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~  115 (171)
                      ...+.+|-+....+.  .+..+.|+|.|-++.|.|-+...+.      .-++.|+|.++.|....+     +.++.|.|.
T Consensus       201 g~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~~-----~~~~~F~i~  275 (311)
T 1nty_A          201 GELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVE-----GDPCKFALW  275 (311)
T ss_dssp             CCEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCCT-----TCTTEEEEE
T ss_pred             CCceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEccC-----CCCceEEEE
Confidence            346677776655432  3467899999999999888753321      236778898888764332     357899998


Q ss_pred             e-----CCceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         116 T-----KHGGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       116 t-----~~rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      .     +...|.|+|.|.+|++.|+++|+.++..
T Consensus       276 ~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e  309 (311)
T 1nty_A          276 VGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE  309 (311)
T ss_dssp             ESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhh
Confidence            7     3567999999999999999999998764

>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A

Probab=98.16  E-value=1.8e-05  Score=67.16  Aligned_cols=94  Identities=13%  Similarity=0.150  Sum_probs=68.8

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCc------------------cceEEECCCeEEEeecchhhh
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPV------------------ERALVNLATAQVEYSEDQQAM  105 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~------------------~~g~I~L~~~~V~~~~~~~~~  105 (171)
                      ...+++|.|..+... +.++.|+|.|-++.|.|.+..++..                  ....|+|.++.|...++    
T Consensus       257 r~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~----  331 (377)
T 3p6a_A          257 KKLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVAT----  331 (377)
T ss_dssp             SCEEEEEEEEEESSS-SCEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEEECTT----
T ss_pred             ceEEEECCcEEEecC-CCeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhcccccc----
Confidence            468899999776543 3889999999999998887443210                  12368888877754332    


Q ss_pred             cCCCcEEEEEe---CCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         106 VRVPFSFSVVT---KHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       106 ~~r~~~F~I~t---~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                       .....|.|.+   +...|.|+|.|.+|++.|+++|++++.
T Consensus       332 -~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~  371 (377)
T 3p6a_A          332 -DHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAG  371 (377)
T ss_dssp             -CTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             -ccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHH
Confidence             1235566655   346799999999999999999999875

>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}

Probab=98.11  E-value=3.8e-05  Score=65.11  Aligned_cols=98  Identities=13%  Similarity=0.195  Sum_probs=71.5

Q ss_pred             CceeEEeEEEeeeCC-----CCCceEEEEEEeCCcEEEecCCCC---------CccceEEECCCeEEEeecchhhhcCCC
Q psy7933          44 PVVSRKGYLNILEQK-----TNGWKKRWVAVRRPYVFIFRDEKD---------PVERALVNLATAQVEYSEDQQAMVRVP  109 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~-----~~~WkrRWFVL~~~~L~yYk~~~d---------~~~~g~I~L~~~~V~~~~~~~~~~~r~  109 (171)
                      ...+++|-+....+.     .+..+.|+|.|-++.|.|-+...+         ..-++.|+|.++.|....+     +.+
T Consensus       205 ~~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~-----~~~  279 (354)
T 2rgn_B          205 GKLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQ-----GDP  279 (354)
T ss_dssp             CCEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGEEEEESGG-----GCT
T ss_pred             ccccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeeccC-----CCC
Confidence            457778876554322     236789999999999988875432         1235678898888764322     357


Q ss_pred             cEEEEEeC-----CceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         110 FSFSVVTK-----HGGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       110 ~~F~I~t~-----~rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      +.|.|...     ...|.|+|.|.+|++.|+++|+.++..+.
T Consensus       280 ~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~  321 (354)
T 2rgn_B          280 CRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQR  321 (354)
T ss_dssp             TEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence            89999862     36799999999999999999999876654

>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A

Probab=98.09  E-value=2.3e-05  Score=66.82  Aligned_cols=99  Identities=12%  Similarity=0.098  Sum_probs=72.2

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC------------------ccceEEECCCeEEEeecchhhh
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP------------------VERALVNLATAQVEYSEDQQAM  105 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~------------------~~~g~I~L~~~~V~~~~~~~~~  105 (171)
                      ...+++|-|.++.. ...++.|+|.|-++.|.+-+...+.                  .-++.|+|.++.|.....    
T Consensus       255 R~li~eG~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~----  329 (385)
T 1txd_A          255 RKMIHEGPLVWKVN-RDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVAT----  329 (385)
T ss_dssp             SCEEEEEEEEEESS-SSCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC----
T ss_pred             ceEEEECcEEEEcC-CCCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceeccccccccccc----
Confidence            57889999986543 2468899999999999887753321                  124678888887754322    


Q ss_pred             cCCCcEEEEEeC---CceEEEEeCCHHHHHHHHHHHHHHhhhhhhc
Q psy7933         106 VRVPFSFSVVTK---HGGYLMQTAGAREVHEWLYAINPLLAGQIRS  148 (171)
Q Consensus       106 ~~r~~~F~I~t~---~rt~~f~A~s~~E~~~WI~aI~~~~~~~~~~  148 (171)
                       ..+++|.|...   .+.|.|+|.|.+|++.|+++|++++......
T Consensus       330 -d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~~  374 (385)
T 1txd_A          330 -DNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQ  374 (385)
T ss_dssp             --CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccCC
Confidence             12466777653   4779999999999999999999988755433

>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A

Probab=98.07  E-value=2.1e-05  Score=70.65  Aligned_cols=97  Identities=12%  Similarity=0.145  Sum_probs=68.2

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC------------------ccceEEECCCeEEEeecchhh
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP------------------VERALVNLATAQVEYSEDQQA  104 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~------------------~~~g~I~L~~~~V~~~~~~~~  104 (171)
                      ....+++|.|.++... +.++.|||+|-++.|.|.+...+.                  .-...|+|.++.|...++.  
T Consensus       409 ~R~LI~eG~l~~~~~~-~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~d--  485 (536)
T 3odw_A          409 KKKLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD--  485 (536)
T ss_dssp             TSCEEEEEEEEEESCC----CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEECTTC--
T ss_pred             cceeeeecceEEEecC-CCeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeeccccc--
Confidence            3568999999877643 378999999999999888754321                  0123688888877653321  


Q ss_pred             hcCCCcEEEEEe---CCceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         105 MVRVPFSFSVVT---KHGGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       105 ~~~r~~~F~I~t---~~rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                         ....|.|.+   +...|.|+|.|.+|++.||++|+.++...
T Consensus       486 ---~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~  526 (536)
T 3odw_A          486 ---HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL  526 (536)
T ss_dssp             ---TTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTS
T ss_pred             ---CCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence               233444443   35789999999999999999999998643

>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A

Probab=98.00  E-value=3e-05  Score=65.14  Aligned_cols=95  Identities=21%  Similarity=0.174  Sum_probs=69.4

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCC--CC---c-cceEEECCCeEEEeecchhh-h----------
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEK--DP---V-ERALVNLATAQVEYSEDQQA-M----------  105 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~--d~---~-~~g~I~L~~~~V~~~~~~~~-~----------  105 (171)
                      ....+++|-|.+..     -+.|+|.|-++.|.+-+...  +.   . -++.|+|..+.|...++.+. .          
T Consensus       229 ~r~li~~G~l~~~~-----~~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~  303 (346)
T 2z0q_A          229 SRVLCCHGELKNNR-----GVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSN  303 (346)
T ss_dssp             CCCEEEEEEEEETT-----SCEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSH
T ss_pred             CeEEEEeceeEECC-----CcEEEEEECCCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccC
Confidence            45678999997632     27899999999998887532  21   1 24678898888876543210 0          


Q ss_pred             -cCCCcEEEEEeC----CceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         106 -VRVPFSFSVVTK----HGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       106 -~~r~~~F~I~t~----~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                       ..-+++|.|...    ...|.|+|.|.+|++.|+++|+.++
T Consensus       304 ~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai  345 (346)
T 2z0q_A          304 NERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK  345 (346)
T ss_dssp             HHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence             023689999853    5789999999999999999999875

>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A

Probab=97.78  E-value=6.1e-05  Score=72.66  Aligned_cols=95  Identities=14%  Similarity=0.222  Sum_probs=74.2

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC-----------CccceEEECCCeEEEeecchhhhcCCCcE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD-----------PVERALVNLATAQVEYSEDQQAMVRVPFS  111 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d-----------~~~~g~I~L~~~~V~~~~~~~~~~~r~~~  111 (171)
                      ....+++|.|.+.+.+    +.|+|.|-++.|.|-|....           ..-++.|+|.++.|...++.+   .-++.
T Consensus       441 ~r~Li~eG~l~~~~~k----~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~---~~~~~  513 (1049)
T 3ksy_A          441 CNEFIMEGTLTRVGAK----HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN---EYKHA  513 (1049)
T ss_dssp             CSCCCCEEEEEETTCS----SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSS---SCCSE
T ss_pred             cceEEEeceEEEEccC----ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCc---cccce
Confidence            4567899999887633    88999999999999886532           245678999988775444322   35789


Q ss_pred             EEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         112 FSVVTKH-GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       112 F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      |.|...+ ..|.|+|.|.+|++.||++|+.++..
T Consensus       514 F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k  547 (1049)
T 3ksy_A          514 FEIILKDENSVIFSAKSAEEKNNWMAALISLQYR  547 (1049)
T ss_dssp             EEECCTTSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence            9998875 48999999999999999999887653

>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1

Probab=97.76  E-value=0.00035  Score=59.30  Aligned_cols=102  Identities=13%  Similarity=0.095  Sum_probs=68.6

Q ss_pred             ceeEEeEEEeeeC-----CCCCceEEEEEEeCCcEEE-ecCCC-------------------CCccceEEECCCeEEEee
Q psy7933          45 VVSRKGYLNILEQ-----KTNGWKKRWVAVRRPYVFI-FRDEK-------------------DPVERALVNLATAQVEYS   99 (171)
Q Consensus        45 ~v~k~GwL~K~g~-----~~~~WkrRWFVL~~~~L~y-Yk~~~-------------------d~~~~g~I~L~~~~V~~~   99 (171)
                      ..+.+|-+....+     ..+.-+.|++.|-++.|.+ .+...                   ...-++.|+|.++.|...
T Consensus       237 ~ll~~~~~~~~~~~~~~~~~~k~~~~~~fLF~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~~v~~~  316 (377)
T 1foe_A          237 DLLLHTSVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEALQVRAL  316 (377)
T ss_dssp             GEEEEEEEEESSCCHHHHTTCSSCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGEEEECC
T ss_pred             ceeeecceeeccCchhhccccccceEEEEEcCCeEEEEeccccccccccccccccccccCCCceeEeeeccccceEEEec
Confidence            4566776654432     1234467999998887665 45321                   112357799999988765


Q ss_pred             cchhhhcCCCcEEEEE--------eCCceEEEEeCCHHHHHHHHHHHHHHhhhhhhc
Q psy7933         100 EDQQAMVRVPFSFSVV--------TKHGGYLMQTAGAREVHEWLYAINPLLAGQIRS  148 (171)
Q Consensus       100 ~~~~~~~~r~~~F~I~--------t~~rt~~f~A~s~~E~~~WI~aI~~~~~~~~~~  148 (171)
                      ++.+.  .....|.|.        ++.+.|.|+|.|.+|+++|+.+|..++....+.
T Consensus       317 ~~~~~--~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~~~  371 (377)
T 1foe_A          317 PSADA--EANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHRR  371 (377)
T ss_dssp             CCTTT--TSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcc--chhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHhhh
Confidence            54321  123468876        346789999999999999999999999765543

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A

Probab=97.63  E-value=0.00063  Score=63.89  Aligned_cols=92  Identities=16%  Similarity=0.352  Sum_probs=68.5

Q ss_pred             ceeEEeEEEeeeCCC--CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC----
Q psy7933          45 VVSRKGYLNILEQKT--NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH----  118 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~--~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~----  118 (171)
                      .++..|||.......  ++=|.-||||....|.|||++.+...+-.++|.+..+.-.+ .. ...+++.|.|..+.    
T Consensus       539 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~  616 (772)
T 3zvr_A          539 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVE-KG-FMSSKHIFALFNTEQRNV  616 (772)
T ss_dssp             CEEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTTCCCEEEEEECTTEEEEEC---------CEEEEEEETTSSCS
T ss_pred             cceeeeeeeecccccccCCCccceeeccccccccccchhhhcccccccccccccchhh-hc-cccccccccccCCccccc
Confidence            489999998755433  37788999999999999999877677778899888764332 22 34578999998643    


Q ss_pred             ----ceEEEEeCCHHHHHHHHHHH
Q psy7933         119 ----GGYLMQTAGAREVHEWLYAI  138 (171)
Q Consensus       119 ----rt~~f~A~s~~E~~~WI~aI  138 (171)
                          ++.-|.|+++++.+.|...+
T Consensus       617 ~~~~~~~~l~~~~~~~~~~~~~~~  640 (772)
T 3zvr_A          617 YKDYRQLELACETQEEVDSWKASF  640 (772)
T ss_dssp             BTTBSEEEEEESSHHHHHHHHHHH
T ss_pred             cchhhhhhhhccccccchhhHHhh
Confidence                35789999999999999876

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=97.62  E-value=0.00067  Score=62.97  Aligned_cols=97  Identities=9%  Similarity=0.182  Sum_probs=67.6

Q ss_pred             CCceeEEeEEEeeeCCCC-CceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-Cce
Q psy7933          43 SPVVSRKGYLNILEQKTN-GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-HGG  120 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~-~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-~rt  120 (171)
                      ...+++.|++.|+++... .|+||+|.|..+.|.++....  .+...+.+..+.-....    .....++|.+.+. .++
T Consensus       556 ~~~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~~--~~~~l~~~~~v~~v~k~----~i~~~~~l~~~~k~~k~  629 (689)
T 3v5w_A          556 GKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGE--APQSLLTMEEIQSVEET----QIKERKCLLLKIRGGKQ  629 (689)
T ss_dssp             SSCCCEEEEEEEC-------CEEEEEEEETTEEEEECTTS--CCCEEEEGGGEEEEEEE----ESSSCEEEEEEETTTEE
T ss_pred             CCcceeecccccCCCcccchhhhhccccCCCcccccccCC--CCcceeeeccccccccC----cCCCCcceeeeecCCcE
Confidence            457889999999987654 999999999999888775432  34455666654322111    1235678888875 588


Q ss_pred             EEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         121 YLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       121 ~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      |++.+.|+.++.+|+.+|+.+....
T Consensus       630 f~~~t~~~~~~~~W~~~i~~~~~~~  654 (689)
T 3v5w_A          630 FILQCDSDPELVQWKKELRDAYREA  654 (689)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCChHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999876533

>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1

Probab=96.96  E-value=0.0021  Score=47.08  Aligned_cols=98  Identities=10%  Similarity=0.074  Sum_probs=71.0

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCC-----CCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEK-----DPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~-----d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~  118 (171)
                      ...+++|++.-..+. ..=+.|++.|-...|.+-|...     ...-+..|.+..+.|....+.    +.+..|+|....
T Consensus         8 G~Ll~q~~f~V~~~~-~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lte~~~~----~d~~kFeiw~~~   82 (119)
T 1fho_A            8 GRIIRHDAFQVWEGD-EPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTD----EDTIVLQPQEPG   82 (119)
T ss_dssp             CCSSEEEEEEECSTT-CSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTT----CCEEEEECCSTT
T ss_pred             CCccccCceEEEeCC-CCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeeceeEEEecCCC----CCCcEEEEccCC
Confidence            456788888776643 3456699999999888887551     123467899998888654331    246779998764


Q ss_pred             --ceEEE--EeCCHH-HHHHHHHHHHHHhhhhh
Q psy7933         119 --GGYLM--QTAGAR-EVHEWLYAINPLLAGQI  146 (171)
Q Consensus       119 --rt~~f--~A~s~~-E~~~WI~aI~~~~~~~~  146 (171)
                        ..|.+  +|.|.+ ..+.||+.|...+....
T Consensus        83 ~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~~~  115 (119)
T 1fho_A           83 LPSFRIKPKDFETSEYVRKAWLRDIAEEQEKYA  115 (119)
T ss_dssp             CCCBCCCCCSSSSCSHHHHHHHHHHHTCCHHHH
T ss_pred             CCceEEEeeecCCcHHHHHHHHHHHHHHHHHHh
Confidence              45788  999999 99999999998654433

>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}

Probab=96.75  E-value=0.0058  Score=50.36  Aligned_cols=56  Identities=14%  Similarity=0.182  Sum_probs=43.7

Q ss_pred             ceEEECCCeEEEeecchhhhcCCCcEEEEEeCC--ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933          86 RALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH--GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus        86 ~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~--rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .+.|+|..+.|......  .-.++++|+|.+++  .+++|.|++.+++.+|+++|+..+.
T Consensus       205 ~~~ipL~m~~~tR~~~~--~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~  262 (263)
T 1z87_A          205 AKHVSLKMAYVSRRCTP--TDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG  262 (263)
T ss_dssp             CEEEESSSEEEEEECCS--SCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred             ccccCcceeeeeeeccc--cCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence            37788988877653221  11379999999975  5589999999999999999998763

>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1

Probab=95.95  E-value=0.026  Score=44.16  Aligned_cols=57  Identities=16%  Similarity=0.204  Sum_probs=44.5

Q ss_pred             cceEEECCCeEEEeecchhhhcCCCcEEEEEeCC--ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933          85 ERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH--GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus        85 ~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~--rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      ...+|+|.-|-|...-...  -.+.++|+|.+++  .+.+|.|++..+...|+++|+..+.
T Consensus       119 D~~~IPLkMayvtR~~~~t--D~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~  177 (178)
T 2adz_A          119 EAKHVSLKMAYVSRRCTPT--DPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG  177 (178)
T ss_dssp             SCEEEETTTCEEEEECCSS--CCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred             cceeecHHHHHHHHhccCC--CCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence            3678999988876532111  1378999999976  5589999999999999999998663

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=92.39  E-value=1.2  Score=42.15  Aligned_cols=99  Identities=11%  Similarity=0.123  Sum_probs=61.3

Q ss_pred             CceeEEeE-EEeeeCCCCCceEEEEEEeCC--cEEEecCCCCCccceEEECCCeEEEeecchh---------hh---cC-
Q psy7933          44 PVVSRKGY-LNILEQKTNGWKKRWVAVRRP--YVFIFRDEKDPVERALVNLATAQVEYSEDQQ---------AM---VR-  107 (171)
Q Consensus        44 ~~v~k~Gw-L~K~g~~~~~WkrRWFVL~~~--~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~---------~~---~~-  107 (171)
                      +..+++|- |.|.+...+..++|.|.|...  +|+|....++.  ...|+|..+.-...-...         ..   .+ 
T Consensus        19 p~~L~~G~~~~K~~~~s~~~~~~~f~lD~d~~~L~W~~~~k~~--~~~l~I~~I~eVR~G~~t~~pk~~klr~~~~~~g~   96 (816)
T 3qr0_A           19 PEQLIKGDKFLKWEEGSSGFIEILLRVDPKGYFLYWKIEGKED--TQLLDLAYVRDIRCAKYAKPPKDKKIKEAGTNFGS   96 (816)
T ss_dssp             CHHHHHCEEEEEECTTCCCCEEEEEEECTTSCEEEECCTTCSS--CEEEEGGGEEEEEEGGGSCCCCSHHHHHHHHHSSC
T ss_pred             CHHHhCCCeEEEECCCCCcceeEEEEEcCCCCEEEEeCCCCCc--CcEEEeeeeeeeecCCcCCCCccHHHHHHHHhcCC
Confidence            34556665 455554444557899999864  44444322322  367888876433322110         00   11 


Q ss_pred             -----CCcEEEEEeCCc--e---EEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         108 -----VPFSFSVVTKHG--G---YLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       108 -----r~~~F~I~t~~r--t---~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                           ...+|.|+...+  .   ..|.|.+.++.+.|+..|+.++..
T Consensus        97 ~~~~~e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~~  143 (816)
T 3qr0_A           97 SNIPLQDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAYN  143 (816)
T ss_dssp             TTSCHHHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHTC
T ss_pred             CcccccccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHHH
Confidence                 246899987642  2   489999999999999999988654

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=90.89  E-value=1.5  Score=41.14  Aligned_cols=98  Identities=9%  Similarity=0.021  Sum_probs=59.8

Q ss_pred             CceeEEeEEEeeeCCCCCc--eEEEEEEeCC--cEEEecCCCCCccceEEECCCeEEEeecchhh----------h-c--
Q psy7933          44 PVVSRKGYLNILEQKTNGW--KKRWVAVRRP--YVFIFRDEKDPVERALVNLATAQVEYSEDQQA----------M-V--  106 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~W--krRWFVL~~~--~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~----------~-~--  106 (171)
                      +..+++|-.+.+-.. +.|  ++|.|.|..+  .|+|+. ..  +....|+|..+.-...-....          . .  
T Consensus        14 ~~~L~~Gt~~~K~~~-~~~~~k~~~frLd~d~~~l~W~~-~~--k~~~~l~I~~IkeIR~G~~s~~pk~~~~~e~~~~~~   89 (799)
T 2zkm_X           14 KAYLSQGERFIKWDD-ETTVASPVILRVDPKGYYLYWTY-QS--KEMEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDF   89 (799)
T ss_dssp             CHHHHHCEEEEEECT-TTCCEEEEEEEECTTSCEEEEEE-TT--SCEEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSS
T ss_pred             cHHHhCCCEEEEEcC-CCcceeEEEEEEcCCCCEEEEcc-CC--CcCceEeeeeeHHhhcCCCCCCCchHHHHHHhcccC
Confidence            344556655544432 344  5688899754  355554 22  235688887764333211000          0 0  


Q ss_pred             ----CCCcEEEEEeCC-----ceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         107 ----RVPFSFSVVTKH-----GGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       107 ----~r~~~F~I~t~~-----rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                          .-..+|.|+...     +...|.|.+.++.+.|+..|+.++...
T Consensus        90 ~~~~~e~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~  137 (799)
T 2zkm_X           90 PDNSFLLKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKHP  137 (799)
T ss_dssp             TTCCGGGTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHCT
T ss_pred             cccccccceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence                124589988753     248999999999999999999987654

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=90.07  E-value=1.8  Score=41.17  Aligned_cols=100  Identities=9%  Similarity=0.035  Sum_probs=60.0

Q ss_pred             CceeEEeEEEeeeCCCCCc-eEEEEEEeCC-cEEEecCCCCCccceEEECCCeEEEee-cch--------hhh-------
Q psy7933          44 PVVSRKGYLNILEQKTNGW-KKRWVAVRRP-YVFIFRDEKDPVERALVNLATAQVEYS-EDQ--------QAM-------  105 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~W-krRWFVL~~~-~L~yYk~~~d~~~~g~I~L~~~~V~~~-~~~--------~~~-------  105 (171)
                      +..+++|-.+.+-.....+ +.+.|.|..+ ...||++++  +....|+|..+.-... .+.        ...       
T Consensus        18 p~~L~~Gt~f~K~~~~~~~~k~~~frLD~d~~~L~W~~~~--ke~~~l~Is~IkeIR~G~~a~~pKd~klr~~~~~~~~~   95 (885)
T 3ohm_B           18 VETLRRGSKFIKWDEETSSRNLVTLRVDPNGFFLYWTGPN--MEVDTLDISSIRDTRTGRYARLPKDPKIREVLGFGGPD   95 (885)
T ss_dssp             CHHHHHCEEEEEECTTCCSCCEEEEEECTTSCEEEEECGG--GCEEEEEGGGEEEEEETTTSCCCCSHHHHHCC------
T ss_pred             cHHHhCCCeEEEECCCCCCcEEEEEEECCCCCEEEEeCCC--CCCceEeeehhhhhhcCcCCCCCccHHHHHHhccCccc
Confidence            4566777655555444434 4566778753 333444432  2345688876643221 110        000       


Q ss_pred             -cCCCcEEEEEeCCc-----eEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         106 -VRVPFSFSVVTKHG-----GYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       106 -~~r~~~F~I~t~~r-----t~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                       .-...+|.|+...+     ...|.|.+.++.+.|+..|+.++...
T Consensus        96 ~~~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~~  141 (885)
T 3ohm_B           96 ARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMNI  141 (885)
T ss_dssp             ---CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHCH
T ss_pred             CcccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhhh
Confidence             11256899987643     48999999999999999999987644

>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A

Probab=87.89  E-value=4.2  Score=31.92  Aligned_cols=100  Identities=14%  Similarity=0.131  Sum_probs=57.0

Q ss_pred             eeEEeEEEeeeCCCCCceEE-EEEEeCC-cEEEecCCCCC--------ccceEEECCCeEEEee-cchhhh------c--
Q psy7933          46 VSRKGYLNILEQKTNGWKKR-WVAVRRP-YVFIFRDEKDP--------VERALVNLATAQVEYS-EDQQAM------V--  106 (171)
Q Consensus        46 v~k~GwL~K~g~~~~~WkrR-WFVL~~~-~L~yYk~~~d~--------~~~g~I~L~~~~V~~~-~~~~~~------~--  106 (171)
                      .+.+|-.+.+....+...+- |+.|..+ ....|.+-.+.        .....|+|.++.-... -+...+      .  
T Consensus        31 ~L~~G~~F~k~~~~r~~~k~~f~rLs~n~k~L~y~d~~~~~~~~p~ld~l~~kI~ls~Is~V~sg~~~p~~~~~~~~k~~  110 (203)
T 3a98_B           31 RLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQN  110 (203)
T ss_dssp             HHHHCEEEECSSCCTTCCSEEEEEECTTSSEEEEEECCBCSSCBCCBCCSCCEEEGGGEEEEEEGGGSTTC--------C
T ss_pred             HHHCCCeEeccCCccccCceEEEEECCCCceEEEccccccccCCCChhhcccceeHhhhhHhhcCCCCcccccccccccc
Confidence            44566665554333333343 4556543 33344433321        1245688887643322 111100      0  


Q ss_pred             --CCCcEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         107 --RVPFSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       107 --~r~~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                        -....|.|.... ..+-|.|.|+.+...|+.-|+.++.+.
T Consensus       111 ~~~~~laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~Llg~~  152 (203)
T 3a98_B          111 KEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLGKD  152 (203)
T ss_dssp             CTTGGGEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHTTCC
T ss_pred             CcccceEEEEecCCCceEEEecCCHHHHHHHHHHHHHHhcCC
Confidence              023589988754 679999999999999999999886543

>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A

Probab=87.56  E-value=1.7  Score=31.78  Aligned_cols=78  Identities=19%  Similarity=0.339  Sum_probs=50.2

Q ss_pred             eEEEEEEeCCcEEEecCCCCC-----ccceEEECCCeEEEeecchhhhcCCCcEEEEEeC------CceEEEEeCCHHHH
Q psy7933          63 KKRWVAVRRPYVFIFRDEKDP-----VERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK------HGGYLMQTAGAREV  131 (171)
Q Consensus        63 krRWFVL~~~~L~yYk~~~d~-----~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~------~rt~~f~A~s~~E~  131 (171)
                      ..|=|+++++++++--.+...     .-..++.++++.-.. .    ..+-|+.|.|+-.      .+.|.|.|.|.+|.
T Consensus        28 ~ER~L~IDGdYIHImP~~~~~~~~~~~KTtS~H~s~Vv~~K-~----s~k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea  102 (121)
T 3ulb_A           28 HERTLAIDGDYIYIVPPEGRIHWHDNVKTKSLHISQVVLVK-K----SKRVPEHFKIFVRREGQDDIKRYYFEAVSGQEC  102 (121)
T ss_dssp             EEEEEEEETTEEEEECCC-------CCCCEEEEGGGEEEEE-E----CSSCTTEEEEEECCTTCSSCEEEEEEESSHHHH
T ss_pred             ccEEEEEcCceEEEecCCCCcccccCCcEEEEEEeeEEEEE-e----cccCCCcEEEEEEccCCCCcceeEEEeCCHHHH
Confidence            446677888888876544321     122344454432111 1    1245888988652      37799999999999


Q ss_pred             HHHHHHHHHHhhhh
Q psy7933         132 HEWLYAINPLLAGQ  145 (171)
Q Consensus       132 ~~WI~aI~~~~~~~  145 (171)
                      .+=|..|+.++.-+
T Consensus       103 ~EIV~~ik~~~~~Y  116 (121)
T 3ulb_A          103 TEIVTRLQNLLSAY  116 (121)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999987633

>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}

Probab=84.04  E-value=8.7  Score=29.55  Aligned_cols=79  Identities=14%  Similarity=0.139  Sum_probs=53.1

Q ss_pred             CceEEEEEEe-----CCcEEEecCCCCC----ccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEEeCCHHHH
Q psy7933          61 GWKKRWVAVR-----RPYVFIFRDEKDP----VERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREV  131 (171)
Q Consensus        61 ~WkrRWFVL~-----~~~L~yYk~~~d~----~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~A~s~~E~  131 (171)
                      +=|.|+.+|.     ...+.+||.....    ....+.+|.+.+.....+     ..+..|.|.- ++.|+.+|++.+|+
T Consensus        63 ~KK~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~-----~~~~gF~ltl-~K~Y~W~a~s~~Er  136 (171)
T 3hie_A           63 NKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDL-----EISEGFILTM-SKKYYWETNSAKER  136 (171)
T ss_dssp             GEEEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECS-----SCTTEEEEES-SSEEEEECSSHHHH
T ss_pred             CccceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccC-----CCCCcEEEEe-CCeEEEecCCHHHH
Confidence            5678998884     2357777744321    233456777664332211     1356788877 59999999999999


Q ss_pred             HHHHHHHHHHhhhh
Q psy7933         132 HEWLYAINPLLAGQ  145 (171)
Q Consensus       132 ~~WI~aI~~~~~~~  145 (171)
                      ..+|..|-.+...+
T Consensus       137 ~~FI~sL~K~y~ky  150 (171)
T 3hie_A          137 TVFIKSLITLYIQT  150 (171)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999998876533

>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}

Probab=83.86  E-value=4.9  Score=33.79  Aligned_cols=81  Identities=14%  Similarity=0.144  Sum_probs=55.4

Q ss_pred             CCceEEEEEEeC-----CcEEEecCCCCC----ccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEEeCCHHH
Q psy7933          60 NGWKKRWVAVRR-----PYVFIFRDEKDP----VERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGARE  130 (171)
Q Consensus        60 ~~WkrRWFVL~~-----~~L~yYk~~~d~----~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~A~s~~E  130 (171)
                      +.=|.|+++|.-     ..+.+||.....    ....+.+|.++.....     ....+..|.|.- ++.|+.+|++.+|
T Consensus       132 kkKK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKTW~L~ELk~Id~-----~~~~~~gF~LTl-~K~YyW~A~s~kE  205 (320)
T 3a58_A          132 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEK-----DLEISEGFILTM-SKKYYWETNSAKE  205 (320)
T ss_dssp             GGEEEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEEEEGGGCCEEEE-----CSSCTTEEEEES-SSEEEEEESSHHH
T ss_pred             cccCceEEEEEEecCCCceEEEEEEEecCCCceEecceechhhhhhhhc-----ccCCCCceEEEe-CCceEEecCCHHH
Confidence            477889998853     348888754321    2344567776643221     013446788776 8999999999999


Q ss_pred             HHHHHHHHHHHhhhhh
Q psy7933         131 VHEWLYAINPLLAGQI  146 (171)
Q Consensus       131 ~~~WI~aI~~~~~~~~  146 (171)
                      ++.+|..|-.+...+.
T Consensus       206 R~~FI~sLvKiy~KYt  221 (320)
T 3a58_A          206 RTVFIKSLITLYIQTF  221 (320)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHc
Confidence            9999999988765444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	171
d1eaza_	103	b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId:	2e-12
d1plsa_	113	b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [Ta	3e-11
d1u5fa1	111	b.55.1.1 (A:109-219) Src-associated adaptor protei	2e-10
d2coca1	99	b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain cont	3e-10
d1u5ea1	209	b.55.1.1 (A:14-222) Src-associated adaptor protein	1e-09
d1faoa_	100	b.55.1.1 (A:) Dual adaptor of phosphotyrosine and	4e-09
d1fgya_	127	b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 1	4e-09
d2coda1	102	b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo	6e-09
d2i5fa1	104	b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapie	7e-09
d1droa_	122	b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila	1e-08
d2dyna_	111	b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId	2e-08
d1v89a_	118	b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KI	2e-08
d1x1ga1	116	b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapie	2e-08
d1u5da1	106	b.55.1.1 (A:108-213) Src kinase-associated phospho	2e-08
d1v5ma_	136	b.55.1.1 (A:) SH2 and PH domain-containing adapter	3e-08
d1upqa_	107	b.55.1.1 (A:) Phosphoinositol 3-phosphate binding	3e-08
d2cofa1	95	b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens)	5e-08
d1w1ha_	147	b.55.1.1 (A:) 3-phosphoinositide dependent protein	1e-07
d2fjla1	101	b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phosph	2e-07
d1v5pa_	126	b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId:	4e-07
d1wgqa_	109	b.55.1.1 (A:) FYVE, RhoGEF and PH domain containin	6e-07
d2j59m1	133	b.55.1.1 (M:931-1063) Rho GTPase-activating protei	6e-07
d1qqga1	103	b.55.1.2 (A:12-114) Insulin receptor substrate 1,	1e-06
d1wjma_	123	b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens),	1e-06
d1wi1a_	126	b.55.1.1 (A:) Calcium-dependent activator protein	1e-06
d1v5ua_	117	b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (M	2e-06
d1unqa_	118	b.55.1.1 (A:) Rac-alpha serine/threonine kinase {H	4e-06
d1v88a_	130	b.55.1.1 (A:) Oxysterol binding protein-related pr	1e-05
d1btna_	106	b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus),	2e-05
d1x1fa1	136	b.55.1.1 (A:8-143) Signal-transducing adaptor prot	2e-05
d2elba2	101	b.55.1.1 (A:274-374) DCC-interacting protein 13-al	4e-05
d2coaa1	112	b.55.1.1 (A:8-119) Protein kinase c, d2 type {Huma	1e-04
d1wg7a_	150	b.55.1.1 (A:) Dedicator of cytokinesis protein 9,	0.001
d1omwa2	119	b.55.1.1 (A:550-668) G-protein coupled receptor ki	0.002

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 2e-12
 Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQ 102
           S V+ + GY          WK+R+  +    +  F+ E +     ++ L          Q
Sbjct: 1   SAVI-KAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQ 59

Query: 103 QAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQ 145
             ++     F +VT    + +Q     E+H W+ A++  +  Q
Sbjct: 60  SDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ 102

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 3e-11
 Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 1/98 (1%)

Query: 42  ISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSED 101
           + P   R+GYL       N WK  WV +    +  ++ + D   + ++ L  + +     
Sbjct: 1   MEPKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQ 60

Query: 102 QQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
                   F     TK   +  Q A   E   W+  IN
Sbjct: 61  DFGKRMFVF-KITTTKQQDHFFQAAFLEERDAWVRDIN 97

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 111

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.0 bits (126), Expect = 2e-10
 Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 5/104 (4%)

Query: 44  PVVSRKGYLNILEQKTN----GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYS 99
           P V + GYL    +  +     W+KRW A+ +   + +  +KD  ++    +    V  +
Sbjct: 7   PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMN 66

Query: 100 EDQQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAINPLL 142
              +   +    F +       Y    A  ++  EW+  +  +L
Sbjct: 67  NTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFIL 110

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 3, FGD3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 3e-10
 Identities = 11/92 (11%), Positives = 27/92 (29%), Gaps = 3/92 (3%)

Query: 50  GYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQ--VEYSEDQQAMVR 107
           G L + E     W + W A+      +   +    +  L              D +  + 
Sbjct: 5   GPLRLSE-SGETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEERLD 63

Query: 108 VPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
               + +      + +  + A    +WL  ++
Sbjct: 64  SGHVWKLQWAKQSWYLSASSAELQQQWLETLS 95

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.0 bits (126), Expect = 1e-09
 Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 5/104 (4%)

Query: 44  PVVSRKGYLNILEQKT----NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYS 99
           P V + GYL    +        W+KRW A+ +   + +  +KD  ++    +    V  +
Sbjct: 102 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMN 161

Query: 100 EDQQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAINPLL 142
              +   +    F +       Y    A  ++  EW+  +  +L
Sbjct: 162 NTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFIL 205

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 4e-09
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 3/96 (3%)

Query: 44  PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQ 103
            + +++GYL         WK RW  + R  +  F+D+  P    +++L        +  Q
Sbjct: 2   SLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQ 61

Query: 104 AMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
                   F +V     + +      E  EW+  + 
Sbjct: 62  ER---VNCFCLVFPFRTFYLCAKTGVEADEWIKILR 94

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 127

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Grp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.9 bits (118), Expect = 4e-09
 Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 18/111 (16%)

Query: 47  SRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQ--- 103
            R+G+L  L  +   WK+RW  +    ++ F    D   R ++ L    +    D +   
Sbjct: 6   DREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVLDPRKPN 65

Query: 104 ---------------AMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
                          A         V   H  Y +      E  EW+ +I 
Sbjct: 66  CFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIK 116

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Centaurin-delta 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 6e-09
 Identities = 19/111 (17%), Positives = 45/111 (40%), Gaps = 12/111 (10%)

Query: 48  RKGYLNILEQKTN-GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMV 106
           + G+L+ L  +    ++KRWV      +  + +EK+   + ++ L+       +      
Sbjct: 3   KSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQGD---- 58

Query: 107 RVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPA 157
                F VVT    ++ +     E ++W+  +       ++S++   Q  A
Sbjct: 59  ---NKFEVVTTQRTFVFRVEKEEERNDWISILL----NALKSQSLTSQSQA 102

>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 7e-09
 Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 5/100 (5%)

Query: 45  VVSRKGYLNILEQKTNGWKKRWVAVRRP--YVFIFRDEKDPVERALVNLATAQVEYSEDQ 102
           V+ ++G L     +   WK R   +R    Y+  +           ++L    V   E  
Sbjct: 1   VIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESN 60

Query: 103 QAMVRVPFSFSVVTKHGG---YLMQTAGAREVHEWLYAIN 139
               +                Y +Q A  +E  EW+ AI 
Sbjct: 61  SNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQ 100

>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 122

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 48.7 bits (115), Expect = 1e-08
 Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 8/100 (8%)

Query: 48  RKGYLNILEQKTN--GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAM 105
           RK   +   +K +   W K ++A +   +  ++D+K       +          ++    
Sbjct: 16  RKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIE 75

Query: 106 V-----RVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
           +     +      V   +G  +L+Q     E+ +W+ ++ 
Sbjct: 76  IASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLK 115

>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dynamin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 2e-08
 Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 8/103 (7%)

Query: 45  VVSRKGYLNILEQKT--NGWKKRWVAVRRPYVFIFRDEKDPVE------RALVNLATAQV 96
           +V RKG+L I        G K+ W  +    +  ++D+++  +        L      + 
Sbjct: 2   LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKG 61

Query: 97  EYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
             S      +      +V   +    +      EV  W  +  
Sbjct: 62  FMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFL 104

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho-GTPase-activating protein 25 (KIAA0053)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 2e-08
 Identities = 16/105 (15%), Positives = 39/105 (37%), Gaps = 9/105 (8%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQ 102
           S    + G+L         W++R+  +R   ++ ++DE+D   +  + L    ++     
Sbjct: 5   SSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATN 64

Query: 103 QAMVRVPFSFSVVTKHGG--------YLMQTAGAREVHEWLYAIN 139
                  F F ++             Y++  +   E+ EW+  + 
Sbjct: 65  PEEAG-KFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLR 108

>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 116

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 2e-08
 Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 9/112 (8%)

Query: 37  IEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVE---RALVNLAT 93
           +  + +S  V ++GYL     K   WK R   +R+   F+   +    E       +L  
Sbjct: 2   LSTVELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRG 61

Query: 94  AQVEYSEDQQAMV------RVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
           + V   ED           +      +      Y +Q +   E  EW+ AI 
Sbjct: 62  SLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIK 113

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src kinase-associated phosphoprotein SKAP55 (SCAP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 2e-08
 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 5/102 (4%)

Query: 46  VSRKGYLNILEQKT----NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSED 101
           V ++GYL    +      + W+KRW  V R   + + +EK    +    +    V  +  
Sbjct: 1   VIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPH 60

Query: 102 QQAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAINPLL 142
            +   +    F + ++    Y        E  +W+  I+ LL
Sbjct: 61  LRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLL 102

>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} Length = 136

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SH2 and PH domain-containing adapter protein APS
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.9 bits (113), Expect = 3e-08
 Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 46  VSRKGYLNILEQK--------TNGWKKRWVAVRR------PYVFIFRDEKDPVERALVNL 91
           + R+G L  +           T  W+K  + +RR        +  F   K    +  + L
Sbjct: 18  IQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPL 77

Query: 92  ATAQVEYSEDQQAMVRVPFSFSVVTKHG-GYLMQTAGAREVHEWLYAIN 139
           +      +     M     +F +  ++G  Y+++T  + + H W+  I 
Sbjct: 78  SAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQ 126

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositol 3-phosphate binding protein-1, PEPP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 3e-08
 Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 3/96 (3%)

Query: 46  VSRKGYLNILEQKTN-GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQA 104
           V  +G+L+  +      WK+RW  +    +F ++D ++      V L +  +        
Sbjct: 9   VHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAP 68

Query: 105 MVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
             R  F+F+        Y++      ++  WL A+ 
Sbjct: 69  RGR-RFTFTAEHPGMRTYVLAADTLEDLRGWLRALG 103

>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: KIAA1914
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (109), Expect = 5e-08
 Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 6/94 (6%)

Query: 46  VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEK-DPVERALVNLATAQVEYSEDQQA 104
           +    YLN+L    + WK RW +VR  ++  ++D     V +  ++L   +V        
Sbjct: 1   LETSSYLNVL--VNSQWKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCEVVPDPSPDH 58

Query: 105 MVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAI 138
           +        +        ++   + E+  WL  +
Sbjct: 59  L---YSFRILHKGEELAKLEAKSSEEMGHWLGLL 89

>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 147

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: 3-phosphoinositide dependent protein kinase-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 1e-07
 Identities = 15/113 (13%), Positives = 43/113 (38%), Gaps = 15/113 (13%)

Query: 46  VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAM 105
           + + G ++  ++K    ++R + +       + D  + V +  +         S++ +  
Sbjct: 48  ILKMGPVD--KRKGLFARRRQLLLTEGPHLYYVDPVNKVLKGEIPW-------SQELRPE 98

Query: 106 VRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPAS 158
            +   +F V T +  Y +    +   H+W   I      ++  +  +  P A+
Sbjct: 99  AKNFKTFFVHTPNRTYYLM-DPSGNAHKWCRKIQ-----EVWRQRYQSHPDAA 145

>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 101

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositide phospholipase C, PLC-gamma-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.0 bits (105), Expect = 2e-07
 Identities = 10/93 (10%), Positives = 30/93 (32%), Gaps = 1/93 (1%)

Query: 48  RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQ-VEYSEDQQAMV 106
           + G L + +   + W   +  +    ++   +    + R ++++   Q     E +   +
Sbjct: 3   KNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDLLRGVLDVPACQIAIRPEGKNNRL 62

Query: 107 RVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
            V              +      E+ +W+  I 
Sbjct: 63  FVFSISMPSVAQWSLDVAADSQEELQDWVKKIR 95

>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 126

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.6 bits (104), Expect = 4e-07
 Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 12/108 (11%)

Query: 44  PVVSRK----GYLNILEQKTNG-WKKRWVAVR--RPYVFIFRDEKDPVERALVNLATAQV 96
           P V R+    G+L+I + + +G + +R+  +      +  + D    +      + + Q+
Sbjct: 9   PYVDRQNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQL 68

Query: 97  EYSEDQQAMVRV-----PFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
            Y               PF F +      Y +Q    +++ +W+ A+N
Sbjct: 69  TYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALN 116

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} Length = 109

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.9 bits (102), Expect = 6e-07
 Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 2/97 (2%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQ 102
           S   +  GYL   +     WK  W  ++   ++ +   +D        L    V   +D+
Sbjct: 5   SSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDE 64

Query: 103 QAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
            +  +V     +      Y+ +   A     W+ A  
Sbjct: 65  NSESKVF--QLLHKGMVFYVFKADDAHSTQRWIDAFQ 99

>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} Length = 133

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho GTPase-activating protein 21
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 6e-07
 Identities = 16/107 (14%), Positives = 40/107 (37%), Gaps = 17/107 (15%)

Query: 47  SRKGYLNILEQKTNG----------WKKRWVAVRRPYVFIFRD----EKDPVERALVNLA 92
           +++G+L+     T+           WK+ +V +R   +++++D         E   +++ 
Sbjct: 2   AKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVN 61

Query: 93  TAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
              ++ S  +         F + T     L Q     ++  W+  I 
Sbjct: 62  ACLIDISYSETKR---KNVFRLTTSDCECLFQAEDRDDMLAWIKTIQ 105

>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Insulin receptor substrate 1, IRS-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 1e-06
 Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 13/105 (12%)

Query: 46  VSRKGYLNILEQKTNGWKKRWVAVRR-------PYVFIFRDEKDPVERALVNLATAQVEY 98
           V + GYL    +K     KR+  +R          +  + +EK    ++     +  +E 
Sbjct: 2   VRKVGYL----RKPKSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLES 57

Query: 99  SED--QQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPL 141
             +  ++A  +     ++ T+   + +      E   W  A+  L
Sbjct: 58  CFNINKRADSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQL 102

>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} Length = 123

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Human (Homo sapiens), brain 2 isoform [TaxId: 9606]

 Score = 43.5 bits (101), Expect = 1e-06
 Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 6/98 (6%)

Query: 48  RKGYLNILEQKTN--GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYS---EDQ 102
           RK  +    +K     W+  +  +RR  +  ++D K        +               
Sbjct: 16  RKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVA 75

Query: 103 QAMVRVPFSFSVVTKHGG-YLMQTAGAREVHEWLYAIN 139
               +    F +  + G  YL Q     E+  WL  +N
Sbjct: 76  FDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVN 113

>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} Length = 126

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Calcium-dependent activator protein for secretion, CAPS
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (100), Expect = 1e-06
 Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 12/125 (9%)

Query: 46  VSRKGYLNILEQKT-NGWKKRWVAVRRP----YVFIFRDEKDPVERALVNLATAQVEYSE 100
           +   GYL  + +     WKKR+  + +     +      EK    + L+ L    V+Y++
Sbjct: 8   MKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTD 67

Query: 101 DQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPASPA 160
            Q  +      F+ V +    +  +   ++   W+ A+        R+     +P     
Sbjct: 68  PQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMY-------RATGQSHKPVPPTQ 120

Query: 161 LGPSS 165
            GPSS
Sbjct: 121 SGPSS 125

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 117

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SET binding factor 1, Sbf1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.1 bits (100), Expect = 2e-06
 Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 6/103 (5%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVR--RPYVFIFRDEKDPVERALVNLATAQVEY-- 98
           S   S +G L         WK RW  +   +  +  +    D   + +++LA  +     
Sbjct: 5   SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPG 64

Query: 99  --SEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
             +      V     F V T    Y           +W+  I 
Sbjct: 65  TPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQ 107

>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac-alpha serine/threonine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 4e-06
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 5/99 (5%)

Query: 46  VSRKGYLNILEQKTNGWKKRWVAVRRPYVFI-FRDEKDPVERALVNLATAQVEYSEDQQA 104
           + ++G+L+   +    W+ R+  ++    FI +++    V++    L    V   +  + 
Sbjct: 7   IVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKT 66

Query: 105 MVRVPFSFSVVTKHGG----YLMQTAGAREVHEWLYAIN 139
               P +F +                   E  EW  AI 
Sbjct: 67  ERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQ 105

>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 1e-05
 Identities = 13/117 (11%), Positives = 33/117 (28%), Gaps = 21/117 (17%)

Query: 43  SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQ 102
           S  +    +L I       W K W  ++   + I++ +K+      V L   ++     +
Sbjct: 5   SSGIVMADWLKI-RGTLKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPSK 63

Query: 103 Q--------------------AMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
           +                           S +        +++     +   W+ A+ 
Sbjct: 64  KDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALE 120

>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} Length = 106

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Mouse (Mus musculus), brain [TaxId: 10090]

 Score = 39.7 bits (91), Expect = 2e-05
 Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 10/100 (10%)

Query: 48  RKGYLNILEQKTNG--WKKRWVAVRRPYVFIFRDEKDPVE------RALVNLATAQVEYS 99
           RK       +K +   W   +  +    +  ++D K             V+L  A  E +
Sbjct: 7   RKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVA 66

Query: 100 EDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
            D +   +       ++    YL Q     E++ W+ AI+
Sbjct: 67  LDYKK--KKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAIS 104

>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 136

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Signal-transducing adaptor protein 1, STAP-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 2e-05
 Identities = 18/115 (15%), Positives = 44/115 (38%), Gaps = 3/115 (2%)

Query: 38  EEIRISPV-VSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQV 96
           E ++I+ + +  +G+L I       ++  W  +R   +F + D+K  +    +++     
Sbjct: 2   ERLKITALPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTC 61

Query: 97  EYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSKTS 151
               +Q +  +    F++V       ++T       EW   I  +    +    S
Sbjct: 62  L--TEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTELSVPQNVS 114

>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: DCC-interacting protein 13-alpha, APPL1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 4e-05
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 6/98 (6%)

Query: 45  VVSRKGYLNILEQK---TNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSED 101
           +  + GYLN   +    ++ W +++   +   +            A+     + +    +
Sbjct: 4   LTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARGDVAGGLAMDIDNCSVMAVDCE 63

Query: 102 QQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
            +       SF         ++Q    ++  EW+  IN
Sbjct: 64  DRRYCFQITSF---DGKKSSILQAESKKDHEEWICTIN 98

>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Protein kinase c, d2 type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 1e-04
 Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 48  RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMV- 106
           R+G++     K    K+ +  +    + +F++         + L+      S    ++V 
Sbjct: 3   REGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVP 62

Query: 107 --RVPFSFSVVTKHGGYLMQTAGAREVHEW 134
               P  F +VT +  Y +           
Sbjct: 63  PGTNPHCFEIVTANATYFVGEMPGGTPGGP 92

>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dedicator of cytokinesis protein 9, DOCK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (79), Expect = 0.001
 Identities = 18/138 (13%), Positives = 48/138 (34%), Gaps = 26/138 (18%)

Query: 46  VSRKGYL------NILEQKTNGWKKRWVAVRR--------PYVFIFRDEKDPVERALVNL 91
           +++ G+L      + +      +K+R+  + +         +    +  K+P     ++ 
Sbjct: 18  ITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDS 77

Query: 92  ATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQI----- 146
               V+ ++ ++           +     YL+      E+ EW+  +N +L         
Sbjct: 78  CMGVVQNNKVRRFAF-----ELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQ 132

Query: 147 --RSKTSRRQPPASPALG 162
             R+  S     + P+ G
Sbjct: 133 EKRNGDSHEDDESGPSSG 150

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} Length = 119

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 34.6 bits (78), Expect = 0.002
 Identities = 9/95 (9%), Positives = 30/95 (31%), Gaps = 6/95 (6%)

Query: 46  VSRKGYLNILEQK-TNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQA 104
               GY++ +       W++R+  +    +    + + P     +    +  E    ++ 
Sbjct: 10  CIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQIKER- 68

Query: 105 MVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAIN 139
                     +     +++Q     E+ +W   + 
Sbjct: 69  ----KCLLLKIRGGKQFVLQCDSDPELVQWKKELR 99

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	171
d1faoa_	100	Dual adaptor of phosphotyrosine and 3-phosphoinosi	99.95
d2coaa1	112	Protein kinase c, d2 type {Human (Homo sapiens) [T	99.94
d1eaza_	103	Tapp1 {Human (Homo sapiens) [TaxId: 9606]}	99.93
d2fjla1	101	Phosphoinositide phospholipase C, PLC-gamma-1 {Rat	99.93
d2coda1	102	Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96	99.93
d1u5da1	106	Src kinase-associated phosphoprotein SKAP55 (SCAP1	99.93
d1v88a_	130	Oxysterol binding protein-related protein 8 (ORP-8	99.92
d2dyna_	111	Dynamin {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1v89a_	118	Rho-GTPase-activating protein 25 (KIAA0053) {Human	99.92
d1x1fa1	136	Signal-transducing adaptor protein 1, STAP-1 {Huma	99.92
d1u5fa1	111	Src-associated adaptor protein Skap2 {Mouse (Mus m	99.92
d1wgqa_	109	FYVE, RhoGEF and PH domain containing protein 6, F	99.92
d1wi1a_	126	Calcium-dependent activator protein for secretion,	99.92
d2coca1	99	FYVE, RhoGEF and PH domain containing protein 3, F	99.91
d1fgya_	127	Grp1 {Mouse (Mus musculus) [TaxId: 10090]}	99.91
d1u5ea1	209	Src-associated adaptor protein Skap2 {Mouse (Mus m	99.91
d1plsa_	113	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1wg7a_	150	Dedicator of cytokinesis protein 9, DOCK9 {Human (	99.91
d1qqga1	103	Insulin receptor substrate 1, IRS-1 {Human (Homo s	99.91
d1v5ua_	117	SET binding factor 1, Sbf1 {Mouse (Mus musculus) [	99.91
d1upqa_	107	Phosphoinositol 3-phosphate binding protein-1, PEP	99.9
d1btka_	169	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.9
d2j59m1	133	Rho GTPase-activating protein 21 {Human (Homo sapi	99.9
d2i5fa1	104	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1unqa_	118	Rac-alpha serine/threonine kinase {Human (Homo sap	99.89
d1w1ha_	147	3-phosphoinositide dependent protein kinase-1 {Hum	99.89
d1omwa2	119	G-protein coupled receptor kinase 2 (beta-adrenerg	99.88
d1x1ga1	116	Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d2elba2	101	DCC-interacting protein 13-alpha, APPL1 {Human (Ho	99.88
d1v5pa_	126	Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}	99.88
d1v5ma_	136	SH2 and PH domain-containing adapter protein APS {	99.88
d2cofa1	95	KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1btna_	106	beta-spectrin {Mouse (Mus musculus), brain [TaxId:	99.84
d1wjma_	123	beta-spectrin {Human (Homo sapiens), brain 2 isofo	99.84
d1droa_	122	beta-spectrin {Fruit fly (Drosophila melanogaster)	99.81
d1v61a_	132	Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [	99.62
d2dfka2	162	Rho guanine nucleotide exchange factor 9, Collybis	99.28
d1zc3b1	109	Exocyst complex protein EXO84 {Rat (Rattus norvegi	99.21
d1maia_	119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	99.18
d1dbha2	133	Son of sevenless-1 (sos-1) {Human (Homo sapiens) [	99.06
d1ki1b2	142	GEF of intersectin {Human (Homo sapiens) [TaxId: 9	98.82
d1ntya2	121	Triple functional domain protein TRIO {Human (Homo	98.77
d1xcga2	140	Rho guanine nucleotide exchange factor 11, PDZ-Rho	98.55
d1txda2	114	Rho guanine nucleotide exchange factor 12 {Human (	98.55
d1fhoa_	119	UNC-89 {Nematode (Caenorhabditis elegans) [TaxId:	98.38
d1kz7a2	147	Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId	98.28
d2adza1	105	Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 1	97.67
d2zkmx3	131	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	96.51
d1foea2	162	GEF of TIAM1 (T-Lymphoma invasion and metastasis i	95.22
d1zsqa1	125	Myotubularin-related protein 2, N-terminal domain	81.24

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.1e-28  Score=169.49  Aligned_cols=96  Identities=19%  Similarity=0.355  Sum_probs=85.4

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEE
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQ  124 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~  124 (171)
                      ...|+|||.|+++..+.|++|||||.++.|+||+++++..+.|.|+|.++.+......   ..++++|.|.|++++|+|+
T Consensus         3 ~~~KeG~L~K~~~~~k~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~---~~~~~~F~i~~~~r~~~l~   79 (100)
T d1faoa_           3 LGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYS---QERVNCFCLVFPFRTFYLC   79 (100)
T ss_dssp             TTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECS---SSSSSEEEEEETTEEEEEE
T ss_pred             CccEEEEEEEeCCCCCCceEEEEEEECCEEEEEeccCCccCceEEechheEEEEeccc---cccccccccccCCeEEEEE
Confidence            3579999999999989999999999999999999999999999999998865433322   2578999999999999999


Q ss_pred             eCCHHHHHHHHHHHHHHhh
Q psy7933         125 TAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       125 A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|++||++||+||+..+.
T Consensus        80 a~s~~~~~~Wi~ai~~~i~   98 (100)
T d1faoa_          80 AKTGVEADEWIKILRWKLS   98 (100)
T ss_dssp             CSSHHHHHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHHHHh
Confidence            9999999999999998764

>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Protein kinase c, d2 type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.7e-27  Score=167.55  Aligned_cols=96  Identities=19%  Similarity=0.268  Sum_probs=81.9

Q ss_pred             eEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchh---hhcCCCcEEEEEeCCceEEE
Q psy7933          47 SRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQ---AMVRVPFSFSVVTKHGGYLM  123 (171)
Q Consensus        47 ~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~---~~~~r~~~F~I~t~~rt~~f  123 (171)
                      +|+|||.|+++..+.||||||||+++.|+||+++.+.++.|.|+|..+.+.......   ....+++||+|.|++|+|+|
T Consensus         2 lk~GwL~k~~~~~~~wkkRwFvL~~~~L~YYk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~~~~~~~~F~I~T~~rtyy~   81 (112)
T d2coaa1           2 LREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFV   81 (112)
T ss_dssp             SEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSSCCCCE
T ss_pred             ceEEEEEEECCCCCCeeEEEEEEEcceEEEEeccCCCccceEEeeeccccccccccccccccCCCccEEEEEeCCeEEEE
Confidence            699999999999999999999999999999999999999999999876544332211   11257899999999999999


Q ss_pred             Ee-----------CCHHHHHHHHHHHHHHh
Q psy7933         124 QT-----------AGAREVHEWLYAINPLL  142 (171)
Q Consensus       124 ~A-----------~s~~E~~~WI~aI~~~~  142 (171)
                      .|           ++.+++++||+||++++
T Consensus        82 ~~~~~~~~~~~s~~~~~~~~~W~~aI~~A~  111 (112)
T d2coaa1          82 GEMPGGTPGGPSGQGAEAARGWETAIRQAL  111 (112)
T ss_dssp             ECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred             ecCCccccccccccChHHHHHHHHHHHHhh
Confidence            66           77889999999999864

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.3e-26  Score=158.34  Aligned_cols=101  Identities=19%  Similarity=0.337  Sum_probs=88.5

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEE
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQ  124 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~  124 (171)
                      .|+|+|||.|+++..+.|++|||||.+..|+||+++++..+.+.|+|..+.+..........+..++|.|.+++++|+|+
T Consensus         2 ~vik~G~L~K~~~~~~~Wkkr~fvL~~~~l~yy~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~   81 (103)
T d1eaza_           2 AVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQ   81 (103)
T ss_dssp             CCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEEEE
T ss_pred             ceEEEEEEEEECCCCCCeeEEEEEEECCEEEEEecccCcccceEEEccceEEeeccccccccccceEEEEEeCCEEEEEE
Confidence            57899999999998899999999999999999999999899999999987655443322334678999999999999999


Q ss_pred             eCCHHHHHHHHHHHHHHhhhh
Q psy7933         125 TAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       125 A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      |+|++|+++||.+|+.++..+
T Consensus        82 a~s~~e~~~W~~aI~~ai~~~  102 (103)
T d1eaza_          82 ADSPEEMHSWIKAVSGAIVAQ  102 (103)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHHHHHHc
Confidence            999999999999999988643

>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositide phospholipase C, PLC-gamma-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=1.6e-25  Score=157.10  Aligned_cols=95  Identities=12%  Similarity=0.304  Sum_probs=85.5

Q ss_pred             eEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC---CceEEE
Q psy7933          47 SRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK---HGGYLM  123 (171)
Q Consensus        47 ~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~---~rt~~f  123 (171)
                      +|+|||+|+++..+.|++|||||.++.|+||+++++..+.|.|+|.++.|...++.  ..+++|+|.|.++   .++|+|
T Consensus         2 iK~G~L~k~~~~~k~W~kR~fvL~~~~L~yy~~~~~~~~~~~i~l~~~~v~~~~~~--~~~~~~~f~i~~~~~~~~~~~~   79 (101)
T d2fjla1           2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDLLRGVLDVPACQIAIRPEG--KNNRLFVFSISMPSVAQWSLDV   79 (101)
T ss_dssp             CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCTCCCEEECSTTCEEEEETTC--SSSCSCEEEEECTTTSSCCEEE
T ss_pred             ceEEEEEEEcCCCCCCeEEEEEEECCEEEEEeccccceecceEEcCCceeEeeeee--cccccceeEEeccccccEEEEE
Confidence            69999999999899999999999999999999999999999999999998776543  2468899999985   378999


Q ss_pred             EeCCHHHHHHHHHHHHHHhh
Q psy7933         124 QTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       124 ~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +|+|++|+++||.||+.++.
T Consensus        80 ~a~s~~e~~~Wi~ai~~~~~   99 (101)
T d2fjla1          80 AADSQEELQDWVKKIREVAQ   99 (101)
T ss_dssp             EESSHHHHHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999874

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Centaurin-delta 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.4e-25  Score=156.97  Aligned_cols=92  Identities=20%  Similarity=0.394  Sum_probs=83.1

Q ss_pred             eEEeEEEeeeCCC-CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEEEe
Q psy7933          47 SRKGYLNILEQKT-NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLMQT  125 (171)
Q Consensus        47 ~k~GwL~K~g~~~-~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f~A  125 (171)
                      +|+|||.|+++.. +.|+||||||.++.|+||+++++..+.+.|+|.++.+...       .++++|.|.+++++|+|+|
T Consensus         2 ik~G~L~K~~~~~~~~W~kr~fvL~~~~L~~~~~~~~~~~~~~i~L~~~~~~~~-------~~~~~f~i~~~~~~~~l~a   74 (102)
T d2coda1           2 VKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRV-------QGDNKFEVVTTQRTFVFRV   74 (102)
T ss_dssp             CEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEE-------ETTTEEEEEESSCCEEEEC
T ss_pred             cEEEEEEEECCCCCCCceEEEEEEECCEEEEEeccCcceeEEEEEchhceeecc-------ccceeEEEEcCCcEEEEEe
Confidence            6999999998764 5999999999999999999999999999999999876543       2579999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHhhhh
Q psy7933         126 AGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       126 ~s~~E~~~WI~aI~~~~~~~  145 (171)
                      +|++|+++||++|+.++..+
T Consensus        75 ~s~~e~~~Wi~ai~~~i~~~   94 (102)
T d2coda1          75 EKEEERNDWISILLNALKSQ   94 (102)
T ss_dssp             SSHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhC
Confidence            99999999999999987644

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src kinase-associated phosphoprotein SKAP55 (SCAP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.7e-25  Score=156.33  Aligned_cols=98  Identities=20%  Similarity=0.429  Sum_probs=85.7

Q ss_pred             eeEEeEEEeeeCCC----CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ce
Q psy7933          46 VSRKGYLNILEQKT----NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GG  120 (171)
Q Consensus        46 v~k~GwL~K~g~~~----~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt  120 (171)
                      |+|+|||.|++...    +.|++|||||+++.|+||+++.+..+.|.|+|.++.+...........++|+|.|.+.+ ++
T Consensus         1 vik~G~L~k~~~~~~~~~~~Wkkr~~vL~~~~L~y~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~   80 (106)
T d1u5da1           1 VIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRT   80 (106)
T ss_dssp             EEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCC
T ss_pred             CeEEEEEEEECCCCCCCcCCcEEEEEEEECCEEEEEecccccccccccccCCceEeeccccccccCCceeEEEEcCCCcE
Confidence            68999999988643    48999999999999999999999999999999998877665544344678999999974 78


Q ss_pred             EEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         121 YLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       121 ~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|+|+|++|+++||+||+.++.
T Consensus        81 ~~f~a~s~~e~~~W~~ai~~~i~  103 (106)
T d1u5da1          81 YEFTATSPAEARDWVDQISFLLK  103 (106)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999885

>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-25  Score=162.14  Aligned_cols=97  Identities=15%  Similarity=0.326  Sum_probs=81.8

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC----
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH----  118 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~----  118 (171)
                      +..++|+|||.| ++..+.|+||||||+++.|+||+++++..+.|.|+|.++.|...+..    .++++|+|.++.    
T Consensus         5 ~~~~~~~GwLkk-~~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~----~~~~~f~i~~~~~~~~   79 (130)
T d1v88a_           5 SSGIVMADWLKI-RGTLKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPSK----KDGFCFKLFHPLEQSI   79 (130)
T ss_dssp             SSSCCEEEEEEE-CCSSSSCEEEEEEEETTEEEEESCSSSCCCCEEEECSSCEECCCCTT----TSSCEEEEECTTCCCC
T ss_pred             CCCCeEeCeEEe-CCCCCCceEEEEEEeCCEEEEEcCCCCCcceeEEECCCeEEEEcccc----CCCceEEEEcCCCcce
Confidence            457899999955 45678999999999999999999999999999999999988765543    468899986532    


Q ss_pred             --------------------ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         119 --------------------GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       119 --------------------rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                                          +.|+|+|++++||++||++|+.++..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~l~A~s~~e~~~Wi~al~~~i~~  125 (130)
T d1v88a_          80 WAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS  125 (130)
T ss_dssp             SCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred             ecccCcccccceeEEecCCcEEEEEECCCHHHHHHHHHHHHHHhhc
Confidence                                23789999999999999999998853

>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dynamin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.2e-25  Score=158.27  Aligned_cols=96  Identities=16%  Similarity=0.293  Sum_probs=83.0

Q ss_pred             ceeEEeEEEeeeCCC--CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-----
Q psy7933          45 VVSRKGYLNILEQKT--NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-----  117 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~--~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-----  117 (171)
                      -|+|+|||.|+++..  +.||+|||||+++.|+||+++++..+.|.|+|.++.|...+..  ..+++++|.|.++     
T Consensus         2 ~vik~GwL~k~~~~~~~~~WkkRwFvL~~~~L~yyk~~~~~~~~~~i~l~~~~v~~~~~~--~~~~~~~F~l~~~~~~~~   79 (111)
T d2dyna_           2 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKG--FMSSKHIFALFNTEQRNV   79 (111)
T ss_dssp             CEEEEEEEEETTCCTTTTSSEEEEEEEESSEEEEESSTTCCCEEEEEECTTEEEEEECCC--STTCSEEEEEEESSCSCS
T ss_pred             eEEEEeeEEEECCCCCcCCceEEEEEEECCEEEEEcchhhcccccccccccceeEeeccc--cccccccEEeeecccccc
Confidence            478999999997653  5899999999999999999999999999999999887654432  3468999999864     


Q ss_pred             ---CceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         118 ---HGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       118 ---~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                         .++|+|+|++++|+++|+.||..+.
T Consensus        80 ~~~~r~~~l~a~s~ed~~~W~~al~~A~  107 (111)
T d2dyna_          80 YKDYRQLELACETQEEVDSWKASFLRAG  107 (111)
T ss_dssp             BTTBSSEEEEESSHHHHHHHHHHHHHTT
T ss_pred             ccCceeEEEECCCHHHHHHHHHHHHHhc
Confidence               3689999999999999999999864

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho-GTPase-activating protein 25 (KIAA0053)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1e-24  Score=155.84  Aligned_cols=101  Identities=16%  Similarity=0.391  Sum_probs=87.7

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC----
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH----  118 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~----  118 (171)
                      +..++|+|||.|++...+.|++|||||+++.|+||+++++..+.+.|+|..+.+...... .....+|+|.|.+..    
T Consensus         5 ~s~~~k~G~L~K~~~~~k~WkkR~fvL~~~~l~y~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~f~l~~~~~~~~   83 (118)
T d1v89a_           5 SSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATN-PEEAGKFVFEIIPASWDQN   83 (118)
T ss_dssp             SSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCC-SSCCCCCEEEEEESCCSSC
T ss_pred             CCCCeEEEEEEEECCCCCCcEEEEEEEECCEEEEecccCcccccceeccCceEEEEeccc-cccCCCcEEEEecCCCcce
Confidence            457899999999999999999999999999999999999999999999999887654332 234678999998743    


Q ss_pred             ----ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         119 ----GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       119 ----rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                          ++|+|+|++++|+++||.||+.++..
T Consensus        84 ~~~~~~~~~~a~s~ee~~~Wi~aI~~a~~~  113 (118)
T d1v89a_          84 RMGQDSYVLMASSQAEMEEWVKFLRRVAGS  113 (118)
T ss_dssp             CSSCCCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred             ecCCcEEEEEcCCHHHHHHHHHHHHHHHcc
Confidence                67999999999999999999998753

>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Signal-transducing adaptor protein 1, STAP-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.4e-25  Score=163.04  Aligned_cols=99  Identities=14%  Similarity=0.215  Sum_probs=87.1

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEE
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLM  123 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f  123 (171)
                      ..+.++|||.|++...+.|+||||||+++.|+||+++.+..+.+.|+|.++.+...+..  ..+.+|+|.|.+++++|+|
T Consensus         9 ~~~~~eG~L~k~~~~~k~WkkrwfvL~~~~L~yY~~~~d~~~~~~i~L~~~~~~~~~~~--~~~~~~~F~i~~~~~~~~f   86 (136)
T d1x1fa1           9 LPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNS--TEKNCAKFTLVLPKEEVQL   86 (136)
T ss_dssp             SCEEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSCCEEEECCC--TTSCCCEEEEECSSCCEEE
T ss_pred             CCccEEEEEEEECCCCCCeEEEEEEEcCCEeEEEeecccccccccccccceeeeeeecc--cccccceeeecCCCceEEE
Confidence            45679999999999999999999999999999999999999999999998755443321  2356899999999999999


Q ss_pred             EeCCHHHHHHHHHHHHHHhhh
Q psy7933         124 QTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       124 ~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      +|+|++|+++||.+|+.++..
T Consensus        87 ~Aes~~e~~~Wi~~I~~v~~~  107 (136)
T d1x1fa1          87 KTENTESGEEWRGFILTVTEL  107 (136)
T ss_dssp             ECSSHHHHHHHHHHHHHHHHS
T ss_pred             EeCCHHHHHHHHHHHHHHHhc
Confidence            999999999999999999864

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=1.6e-24  Score=153.73  Aligned_cols=99  Identities=19%  Similarity=0.450  Sum_probs=85.9

Q ss_pred             CceeEEeEEEeeeCCC----CCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-C
Q psy7933          44 PVVSRKGYLNILEQKT----NGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-H  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~----~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-~  118 (171)
                      ..++|+|||.|++...    +.|++|||||.++.|+||+++.+..+.|.|+|.++.+..........+++|+|.|+++ +
T Consensus         7 ~~v~k~G~L~k~~~~~~~~~~~W~~r~~vL~~~~L~~y~~~~~~~p~g~i~L~~~~~~~~~~~~~~~~~~~~f~i~~~~~   86 (111)
T d1u5fa1           7 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK   86 (111)
T ss_dssp             SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTS
T ss_pred             CCeeEEEEEEEECCCCCCCcCCceEEEEEEECCEEEeeccccccCcceEEEecccEEEeeccccccccccceEEEEccCC
Confidence            5789999999998643    4899999999999999999999999999999999887655443333467899999996 5


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      ++|+|+|+|++||++||+||+.++
T Consensus        87 ~~~~~~a~s~~e~~~W~~ai~~~i  110 (111)
T d1u5fa1          87 RIYQFTAASPKDAEEWVQQLKFIL  110 (111)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHC
T ss_pred             cEEEEEcCCHHHHHHHHHHHHHHh
Confidence            799999999999999999999875

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=1.6e-24  Score=153.52  Aligned_cols=98  Identities=17%  Similarity=0.301  Sum_probs=87.3

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-ceE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-GGY  121 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-rt~  121 (171)
                      ...++++|||.|+++..+.|+||||||+++.|+||+++++..+.+.|+|.++.+....+.   .+++|+|.|.+.+ +.|
T Consensus         5 ~~~~~~~G~L~k~~~~~~~W~kr~~vL~~~~L~~~k~~~~~~~~~~i~l~~~~~~~~~~~---~~~~~~F~i~~~~~~~~   81 (109)
T d1wgqa_           5 SSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDE---NSESKVFQLLHKGMVFY   81 (109)
T ss_dssp             CCSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCS---SCSSSEEEEEETTEEEE
T ss_pred             CCCCcEEEEEEEECCCCCCceEEEEEEeCCEEEEeccccccccccccccceeeeeecccc---cccceeeeeecccceEE
Confidence            356789999999999889999999999999999999999999999999999987665443   3689999999875 679


Q ss_pred             EEEeCCHHHHHHHHHHHHHHhh
Q psy7933         122 LMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       122 ~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +|+|++++|+++||.+|+.++.
T Consensus        82 ~f~a~s~~~~~~Wi~ai~~a~~  103 (109)
T d1wgqa_          82 VFKADDAHSTQRWIDAFQEGTV  103 (109)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHS
T ss_pred             EEECCCHHHHHHHHHHHHHHhc
Confidence            9999999999999999999874

>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Calcium-dependent activator protein for secretion, CAPS
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-24  Score=156.21  Aligned_cols=115  Identities=20%  Similarity=0.367  Sum_probs=87.2

Q ss_pred             CceeEEeEEEeeeCC-CCCceEEEEEEeCC--cEEEecCCC--CCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC
Q psy7933          44 PVVSRKGYLNILEQK-TNGWKKRWVAVRRP--YVFIFRDEK--DPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~-~~~WkrRWFVL~~~--~L~yYk~~~--d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~  118 (171)
                      ..+.|+|||+|++.. .+.|+||||||+++  .+|||+++.  +..+++.|+|..+.+..........++.++|.|.+++
T Consensus         6 ~~~~~~G~L~K~g~~~~k~WkkRwfvL~~~~~~~yy~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~i~~~~   85 (126)
T d1wi1a_           6 SGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEG   85 (126)
T ss_dssp             CCEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSS
T ss_pred             CCCcEEEEEEEECCCCCCCceEEEEEEeCCceEEEEEcccccccccceeeeeeceeeeeeccccccccccceeEEeccCC
Confidence            467899999999874 57999999999865  455554443  3567899999988876544333234567889999999


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCCCCCCC
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLLAGQIRSKTSRRQPPASPALGPSS  165 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~~~~~~~~~~~r~~~~~~~~~~~~  165 (171)
                      ++|+|+|+|++||++||++|+.++.       ...++.+....||+|
T Consensus        86 r~~~f~A~s~~e~~~Wv~al~~a~~-------~~~~~~~~~~~~p~s  125 (126)
T d1wi1a_          86 DTVIFASDDEQDRILWVQAMYRATG-------QSHKPVPPTQSGPSS  125 (126)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHHHT-------CSSCCCCCCCCCCCC
T ss_pred             eEEEEEECCHHHHHHHHHHHHHHHH-------hhcCCCCCCCCCCCC
Confidence            9999999999999999999998764       223344445566665

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 3, FGD3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-24  Score=150.77  Aligned_cols=94  Identities=12%  Similarity=0.255  Sum_probs=81.0

Q ss_pred             eEEeEEEeeeCCCCCceEEEEEEeCC---cEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEEE
Q psy7933          47 SRKGYLNILEQKTNGWKKRWVAVRRP---YVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYLM  123 (171)
Q Consensus        47 ~k~GwL~K~g~~~~~WkrRWFVL~~~---~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~f  123 (171)
                      +..|||.++. ..+.|+||||||+++   .||||+++++..+.+.|+|.++.+...+.. ....++++|.|.+++++|+|
T Consensus         2 ~~~G~L~~~~-~~k~W~krwfvL~~~~~~~ly~~~~~~~~~~~~~i~l~~~~~~~~~~~-~~~~~~~~F~i~~~~r~~~l   79 (99)
T d2coca1           2 LLCGPLRLSE-SGETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPE-ERLDSGHVWKLQWAKQSWYL   79 (99)
T ss_dssp             SSEEEEEEES-SSSCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGGCEEECCCSS-SCCSSSEEEEEEETTEEEEE
T ss_pred             ceEEEEEccC-CCCCccEEEEEEecCCccEEEEECcCccccccccccccceeeeecccc-cccCCceEEEEEcCCcEEEE
Confidence            4689999986 457999999999876   599999999999999999999887654322 22467999999999999999


Q ss_pred             EeCCHHHHHHHHHHHHHHh
Q psy7933         124 QTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       124 ~A~s~~E~~~WI~aI~~~~  142 (171)
                      +|+|++|+++||++|+.+.
T Consensus        80 ~A~s~~e~~~Wi~aL~~Aa   98 (99)
T d2coca1          80 SASSAELQQQWLETLSTAA   98 (99)
T ss_dssp             EESSHHHHHHHHHHHHHHH
T ss_pred             ECCCHHHHHHHHHHHHHhc
Confidence            9999999999999999864

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Grp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=4.4e-24  Score=153.74  Aligned_cols=97  Identities=23%  Similarity=0.466  Sum_probs=83.4

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEE----------
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSV----------  114 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I----------  114 (171)
                      ++.|+|||.|+++..+.|+||||||+++.|+||+++.+..+.|.|+|.++.|....+.    .++++|.+          
T Consensus         4 np~keG~L~K~~~~~k~WkrR~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~----~~~~~~~~~~~~~~~~~~   79 (127)
T d1fgya_           4 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVLDP----RKPNCFELYNPSHKGQVI   79 (127)
T ss_dssp             SCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECCS----SCSSEEEEECSSSTTCCC
T ss_pred             CCceEEEEEEECCCCCCcEEEEEEEECCEEEEEccCCCccccceEeCCCeEEEEccCC----CCCceEEEeccccccccc
Confidence            4579999999999889999999999999999999999999999999999887765443    24555543          


Q ss_pred             ------------EeCCceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         115 ------------VTKHGGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       115 ------------~t~~rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                                  .+..++|+|+|+|++|+++||.||+.++...
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~f~a~s~~e~~~Wi~aL~~~i~~~  122 (127)
T d1fgya_          80 KACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD  122 (127)
T ss_dssp             CCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred             cccccccceeEeeCCCeEEEEECCCHHHHHHHHHHHHHHHccC
Confidence                        4567889999999999999999999998744

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=3.4e-24  Score=167.82  Aligned_cols=101  Identities=19%  Similarity=0.430  Sum_probs=87.8

Q ss_pred             CCceeEEeEEEeeeCC----CCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-
Q psy7933          43 SPVVSRKGYLNILEQK----TNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-  117 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~----~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-  117 (171)
                      ...++|+|||.|++..    .+.|+||||||+++.|+||+++.+..+.|.|+|.++.+...+......+++|||.|+++ 
T Consensus       101 ~~~~~k~G~L~K~~~~~~~~~~~Wkkr~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~~~F~i~~~~  180 (209)
T d1u5ea1         101 LPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPD  180 (209)
T ss_dssp             CSSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSS
T ss_pred             cCCeeEEEEEEEecCCCCCccccceEEEEEEECCEEEEEecCCCCccceEEEecceeeeeccccccccCCCcEEEEEcCC
Confidence            3568999999999853    46999999999999999999999999999999999988766543323457899999997 


Q ss_pred             CceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         118 HGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       118 ~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .|+|+|+|++++||++||++|+.++.
T Consensus       181 ~r~~~f~a~s~~e~~~Wi~al~~~i~  206 (209)
T d1u5ea1         181 KRIYQFTAASPKDAEEWVQQLKFILQ  206 (209)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999875

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.2e-24  Score=151.07  Aligned_cols=100  Identities=21%  Similarity=0.356  Sum_probs=87.2

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-CceEE
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-HGGYL  122 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-~rt~~  122 (171)
                      +.++|+|||.|+++..++|++|||||.++.|+||+++++..+.+.|+|.++.+......  ...++++|.|.+. +++|+
T Consensus         3 ~~~ikeG~L~k~~~~~k~WkkryfvL~~~~L~~y~~~~~~~p~~~i~l~~~~~~~~~~~--~~~~~~~f~l~~~~~~~~~   80 (113)
T d1plsa_           3 PKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQD--FGKRMFVFKITTTKQQDHF   80 (113)
T ss_dssp             CCCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSCCS--SCCSSSEEEEEETTTEEEE
T ss_pred             CCceEEEEEEEeCCCCCCceEEEEEEECCEEEEEecCCccccceEEECccCeEEeeecc--cCCcceEEEEecCCCeEEE
Confidence            57899999999998889999999999999999999999999999999999876554322  2467889998885 57899


Q ss_pred             EEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         123 MQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      |+|+|++|+++||++|+.++...
T Consensus        81 ~~a~s~~e~~~Wi~ai~~ai~~~  103 (113)
T d1plsa_          81 FQAAFLEERDAWVRDINKAIKCI  103 (113)
T ss_dssp             EECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999988644

>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dedicator of cytokinesis protein 9, DOCK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.1e-24  Score=157.96  Aligned_cols=99  Identities=17%  Similarity=0.361  Sum_probs=81.8

Q ss_pred             CceeEEeEEEeeeCCC------CCceEEEEEEeCC-----cEEEecCCC-CCccceEEECCCeEEEeecchhhhcCCCcE
Q psy7933          44 PVVSRKGYLNILEQKT------NGWKKRWVAVRRP-----YVFIFRDEK-DPVERALVNLATAQVEYSEDQQAMVRVPFS  111 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~------~~WkrRWFVL~~~-----~L~yYk~~~-d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~  111 (171)
                      ..++|+|||+|++...      +.|+||||||++.     .|+||+++. +..+.+.|+|..+.+....+.    .++|+
T Consensus        16 ~~v~k~G~L~K~~~~~~~~~~~k~WkkR~fvL~~~~~~~~~L~yy~~~~~~~~~~g~i~l~~~~~~~~~~~----~~~~~   91 (150)
T d1wg7a_          16 GGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNNK----VRRFA   91 (150)
T ss_dssp             CCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCCCS----SCTTE
T ss_pred             CCEeEEEEEEEecCCCCcccccccceEEEEEEEcCcCCceeEEEEeccccccccccccccccccccccCcc----ccceE
Confidence            4688999999998654      4899999999865     377777655 568899999999877654442    57899


Q ss_pred             EEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         112 FSVVTKH-GGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       112 F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      |.|.+.+ ++|+|+|++++||++||++|+.++....
T Consensus        92 F~i~~~~~~~~~l~A~s~~e~~~Wi~aL~~~i~~~~  127 (150)
T d1wg7a_          92 FELKMQDKSSYLLAADSEVEMEEWITILNKILQLNF  127 (150)
T ss_dssp             EEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCeEEEEEeCCHHHHHHHHHHHHHHHHhhh
Confidence            9999875 7899999999999999999999887554

>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Insulin receptor substrate 1, IRS-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.6e-24  Score=149.64  Aligned_cols=90  Identities=17%  Similarity=0.278  Sum_probs=75.7

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCC-------cEEEecCCC-----CCccceEEECCCeEEEeecchhhhcCCCcEE
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRP-------YVFIFRDEK-----DPVERALVNLATAQVEYSEDQQAMVRVPFSF  112 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~-------~L~yYk~~~-----d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F  112 (171)
                      +|.|+|||.|+    ++|+||||||++.       .|+||+++.     +..+.|.|+|.+|......+.   ..++|+|
T Consensus         1 dv~k~GyL~K~----k~WkkR~fvL~~~~~~~~~~~L~yy~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~---~~~~~~f   73 (103)
T d1qqga1           1 DVRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRAD---SKNKHLV   73 (103)
T ss_dssp             CEEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECC---SSCSSEE
T ss_pred             CcceeEEEEEc----CCCCEEEEEEecccccCCccEEEEEcchhhhhcccccccceEecceeeEEeeccc---CCCceEE
Confidence            47899999986    5899999999875       489999763     356889999998865443332   3578999


Q ss_pred             EEEeCCceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         113 SVVTKHGGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       113 ~I~t~~rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                      .|.|++++|+|+|+|++|+++||+||+++
T Consensus        74 ~i~t~~r~~~l~A~s~~e~~~Wi~al~~l  102 (103)
T d1qqga1          74 ALYTRDEHFAIAADSEAEQDSWYQALLQL  102 (103)
T ss_dssp             EEEESSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred             EEEeCCeEEEEEcCCHHHHHHHHHHHHhh
Confidence            99999999999999999999999999985

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SET binding factor 1, Sbf1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=3.2e-24  Score=152.68  Aligned_cols=101  Identities=19%  Similarity=0.270  Sum_probs=84.7

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeC--CcEEEecCCCCCccceEEECCCeEEEeecchhh----hcCCCcEEEEEe
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRR--PYVFIFRDEKDPVERALVNLATAQVEYSEDQQA----MVRVPFSFSVVT  116 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~--~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~----~~~r~~~F~I~t  116 (171)
                      +..+.++|||.|++...+.||||||||+.  ..|+||+++++..+.|.|+|.++.+........    .....++|.+.+
T Consensus         5 ~s~~~~eG~L~k~~~~~k~WkkR~fvL~~~~~~L~~~~~~~~~~p~g~i~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~   84 (117)
T d1v5ua_           5 SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKT   84 (117)
T ss_dssp             CCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEE
T ss_pred             CCCCeEEEEEEEECCCCCCceEEEEEEeCCCCEEEecccccccCcceEEEecceEEEeecccccccccccccceEEEeeC
Confidence            35678999999999988999999999974  579999999999999999999886654322110    113467899999


Q ss_pred             CCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         117 KHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       117 ~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +.++|+|+|+|++|+++||.+|+.++.
T Consensus        85 ~~~~~~~~a~s~~e~~~Wv~~l~~ai~  111 (117)
T d1v5ua_          85 TRRVYNFCAQDVPSAQQWVDRIQSCLS  111 (117)
T ss_dssp             SSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred             CCcEEEEEeCCHHHHHHHHHHHHHHHh
Confidence            999999999999999999999998774

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositol 3-phosphate binding protein-1, PEPP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.8e-23  Score=146.38  Aligned_cols=99  Identities=18%  Similarity=0.365  Sum_probs=84.4

Q ss_pred             CCceeEEeEEEeeeCC-CCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-Cce
Q psy7933          43 SPVVSRKGYLNILEQK-TNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-HGG  120 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~-~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-~rt  120 (171)
                      +..++++|||.|++.. .+.|++|||||+++.|+||+++.+..+.+.|+|.++.|...... ...+++|+|.|.+. .++
T Consensus         6 ~~~~~~~G~L~k~~~~~~k~W~kr~~vL~~~~L~~y~~~~~~~~~~~i~l~~~~v~~~~~~-~~~~~~~~~~i~~~~~~~   84 (107)
T d1upqa_           6 NLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPG-APRGRRFTFTAEHPGMRT   84 (107)
T ss_dssp             TSCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGGCEEEECCSS-CTTSSSSEEEEECTTSCC
T ss_pred             CCceeEEEEEEEeCCCCCCCeeEEEEEEECCEEEEecCcccccccceecccceEEEEeccC-cccCcceEEEEEcCCCeE
Confidence            3467899999999764 56899999999999999999999999999999999887654322 23467899999986 578


Q ss_pred             EEEEeCCHHHHHHHHHHHHHHh
Q psy7933         121 YLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       121 ~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      |+|+|+|++|+++||+||+.+.
T Consensus        85 ~~~~a~s~~e~~~Wi~al~~A~  106 (107)
T d1upqa_          85 YVLAADTLEDLRGWLRALGRAS  106 (107)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999864

>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.4e-24  Score=163.22  Aligned_cols=100  Identities=11%  Similarity=0.189  Sum_probs=81.7

Q ss_pred             ceeEEeEEEeeeCCCC-----CceEEEEEEeCCcEEEecCCCCC----ccceEEECCCeEEEeecchh------------
Q psy7933          45 VVSRKGYLNILEQKTN-----GWKKRWVAVRRPYVFIFRDEKDP----VERALVNLATAQVEYSEDQQ------------  103 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~-----~WkrRWFVL~~~~L~yYk~~~d~----~~~g~I~L~~~~V~~~~~~~------------  103 (171)
                      .|+++|||.|++...+     +||||||||+++.|+||+++.+.    .++|.|+|.++.+....+.+            
T Consensus         2 ~vi~eG~L~Kr~~~k~k~~~~~WkrRwFVL~~~~L~Yyk~~~~~~~~~~~kG~I~L~~~~~v~~~~~~~~~~~~~~~~~~   81 (169)
T d1btka_           2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRR   81 (169)
T ss_dssp             CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---
T ss_pred             cEEEEEEEEEecCCCCCcCcCCceEEEEEEECCEEeeeccccccccccCccceEeccceEEEEeecccCCCCcccccccc
Confidence            5789999999997433     79999999999999999887653    47899999988654321100            


Q ss_pred             -----------hhcCCCcEEEEEeCCceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         104 -----------AMVRVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       104 -----------~~~~r~~~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                                 ....+.++|.|.|++|+|+|+|+|++||++||++|+.++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~F~I~t~~rt~~l~A~s~eE~~~WI~aL~~~i~~  133 (169)
T d1btka_          82 GEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRY  133 (169)
T ss_dssp             ------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccccccccCcceEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence                       01246799999999999999999999999999999999864

>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho GTPase-activating protein 21
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.3e-24  Score=155.91  Aligned_cols=94  Identities=16%  Similarity=0.403  Sum_probs=74.6

Q ss_pred             eEEeEEEee----------eCCCCCceEEEEEEeCCcEEEecCCCCC----ccceEEECCCeEEEeecchhhhcCCCcEE
Q psy7933          47 SRKGYLNIL----------EQKTNGWKKRWVAVRRPYVFIFRDEKDP----VERALVNLATAQVEYSEDQQAMVRVPFSF  112 (171)
Q Consensus        47 ~k~GwL~K~----------g~~~~~WkrRWFVL~~~~L~yYk~~~d~----~~~g~I~L~~~~V~~~~~~~~~~~r~~~F  112 (171)
                      .|+|||+++          +...+.|++|||||+++.|+||+++.+.    .+.+.|+|.+|.|...++.   .+++|+|
T Consensus         2 ~KeG~L~~k~~~~~~~kk~~~~~k~Wkkr~fvL~~~~L~~y~~~~~~~~~~~~~~~i~L~~~~v~~~~~~---~~r~~~F   78 (133)
T d2j59m1           2 AKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSE---TKRKNVF   78 (133)
T ss_dssp             CEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC--------CEECSSCEEEECSSS---CSCSSEE
T ss_pred             CceEEEEeeccccccccccCCCCCCceEEEEEEeCCEEEEEeccccccccccccccceecceEEEEcccc---cccCcee
Confidence            599999853          3344589999999999999999987653    4678899999988765543   3689999


Q ss_pred             EEEeCCceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         113 SVVTKHGGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       113 ~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      .|.+++++|+|+|+|++||++||.+|+.++.
T Consensus        79 ~i~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~  109 (133)
T d2j59m1          79 RLTTSDCECLFQAEDRDDMLAWIKTIQESSN  109 (133)
T ss_dssp             EEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred             EEecCCCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999998764

>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.2e-23  Score=142.31  Aligned_cols=98  Identities=20%  Similarity=0.294  Sum_probs=79.1

Q ss_pred             ceeEEeEEEeeeCCCCCceEEEEEEeCCc--EEEecCCCCCccceEEECCCeEEEeecchh--hhcCCCcEEEEEeCC-c
Q psy7933          45 VVSRKGYLNILEQKTNGWKKRWVAVRRPY--VFIFRDEKDPVERALVNLATAQVEYSEDQQ--AMVRVPFSFSVVTKH-G  119 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~~WkrRWFVL~~~~--L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~--~~~~r~~~F~I~t~~-r  119 (171)
                      .++|+|||.|+++..++|++|||||+++.  |+||+++++..+.|.|++.++.+.......  ......++|.|.+++ +
T Consensus         1 vv~k~G~L~k~~~~~k~WkkR~fvL~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (104)
T d2i5fa1           1 VIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEV   80 (104)
T ss_dssp             CEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEECTTCC
T ss_pred             CEEEEEEEEEECCCCCCcEEEEEEEECCeeEEEEEcCccccCccceEeecceEEEEeccCcccccccCccEEEEECCCCe
Confidence            37899999999999899999999999764  566777888899999999998776543321  112467899998765 7


Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         120 GYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      .|+|+|+|++|+++||+||+.++
T Consensus        81 ~~~~~a~s~~e~~~W~~ai~~a~  103 (104)
T d2i5fa1          81 HYFLQAATPKERTEWIKAIQMAS  103 (104)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHHHh
Confidence            79999999999999999999875

>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac-alpha serine/threonine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.6e-24  Score=151.37  Aligned_cols=101  Identities=15%  Similarity=0.261  Sum_probs=78.5

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCC-cEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC----C
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRP-YVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK----H  118 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~-~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~----~  118 (171)
                      ..|+|+|||.|+++..+.|++|||||+++ .|+||+++.+..+.+.|+|..+.+...........++++|.|.+.    .
T Consensus         5 ~~v~k~G~L~K~~~~~k~Wk~RwfvL~~~~~l~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~   84 (118)
T d1unqa_           5 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTV   84 (118)
T ss_dssp             GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEE
T ss_pred             CCEEEEEEEEEECCCCCCcEEEEEEEeccceeEEEeeccCccccccccccceEEeecccccccccCCceEEEEeccccce
Confidence            47999999999999999999999999865 688888888777777777765543221111111257899999863    2


Q ss_pred             ceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         119 GGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       119 rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      +.|+|+|+|++|+++||+||+.++..
T Consensus        85 ~~~~f~a~s~~e~~~Wi~ai~~~~~~  110 (118)
T d1unqa_          85 IERTFHVETPEEREEWTTAIQTVADG  110 (118)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence            56999999999999999999998854

>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: 3-phosphoinositide dependent protein kinase-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.2e-23  Score=157.40  Aligned_cols=94  Identities=12%  Similarity=0.142  Sum_probs=79.9

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCceEE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHGGYL  122 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~rt~~  122 (171)
                      ...++|+|||.|+++  ..||||||||+++.|+||+++.+..++|.|+|..+.....       ..+++|.|.|++|+|+
T Consensus        45 g~~ilK~G~L~Kr~~--~~wkkR~FvL~~~~L~YYkd~~~~~~kG~I~L~~~~~v~~-------~~~~~F~I~t~~Rty~  115 (147)
T d1w1ha_          45 NNLILKMGPVDKRKG--LFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEA-------KNFKTFFVHTPNRTYY  115 (147)
T ss_dssp             TCCEEEEEEEEECCT--TSCEEEEEEEETTTEEEEEETTTTEEEEEECCCTTCEEEE-------EETTEEEEECSSCEEE
T ss_pred             CCeEEEEEEEEeecC--CcceEEEEEEcCCeeEEEeCCCcccccceEEecccccccc-------ccCceEEEecCceEEE
Confidence            357899999999874  4799999999999999999999999999999987643321       2468999999999999


Q ss_pred             EEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         123 MQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       123 f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      |+|++ .||++||.||+.++....
T Consensus       116 l~a~~-~d~~~Wv~aI~~v~~~~~  138 (147)
T d1w1ha_         116 LMDPS-GNAHKWCRKIQEVWRQRY  138 (147)
T ss_dssp             EECTT-SCHHHHHHHHHHHHHHHH
T ss_pred             EEcCh-HHHHHHHHHHHHHHHHHh
Confidence            99866 689999999999876443

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.88  E-value=2e-22  Score=145.34  Aligned_cols=99  Identities=9%  Similarity=0.183  Sum_probs=76.1

Q ss_pred             cCCceeEEeEEEeeeCCCC-CceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-Cc
Q psy7933          42 ISPVVSRKGYLNILEQKTN-GWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-HG  119 (171)
Q Consensus        42 ~~~~v~k~GwL~K~g~~~~-~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-~r  119 (171)
                      ...+++++|||.|+|+... .|++|||||.++.|+||+++.+  +.+.|.|..+.......    ..++++|.|.+. ++
T Consensus         6 ~~~~~i~eG~L~K~g~~~~~~WkkR~fvL~~~~L~yy~~~~~--~~~~i~l~~~~~v~~~~----~~~~~~f~i~~~~~~   79 (119)
T d1omwa2           6 LGKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEA--PQSLLTMEEIQSVEETQ----IKERKCLLLKIRGGK   79 (119)
T ss_dssp             TTSCCCEEEEEEECC------CEEEEEEEETTEEEEECTTSC--CCEEEEGGGEEEEEEEE----SSSCEEEEEEETTSC
T ss_pred             cCCCeEEEEEEEEECCCCCCCeEEEEEEEEcCeEEEEecccc--cCccceecccccccccc----ccccceEEEEcCCCc
Confidence            3567899999999997654 7999999999999999998775  56788887664332222    135688888775 58


Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         120 GYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                      +|+|+|+|++|+++||++|+.++....
T Consensus        80 ~~~f~a~s~~e~~~W~~al~~a~~~~~  106 (119)
T d1omwa2          80 QFVLQCDSDPELVQWKKELRDAYREAQ  106 (119)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999876444

>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.6e-23  Score=145.91  Aligned_cols=99  Identities=26%  Similarity=0.362  Sum_probs=78.8

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCc--EEEec-CCCCCccceEEECCCeEEEeecchh-----hhcCCCcEEEE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPY--VFIFR-DEKDPVERALVNLATAQVEYSEDQQ-----AMVRVPFSFSV  114 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~--L~yYk-~~~d~~~~g~I~L~~~~V~~~~~~~-----~~~~r~~~F~I  114 (171)
                      ...++|+|||.|++...+.|+||||||+++.  ++||. +..+..+.|.|+|.++.|...++..     ....+.++|.|
T Consensus         8 ~~~v~k~G~L~K~~~~~k~WkkR~fvL~~~~~~~~~~~~~~~~~~p~~~i~L~~~~i~~~~~~~~~~~~~~~~~~~~f~i   87 (116)
T d1x1ga1           8 SGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKV   87 (116)
T ss_dssp             CSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEE
T ss_pred             CCCEEEEEEEEEEcCCCCCCceEEEEEECCCcEEEEeccccccccceeEEEcCCCEEEEecccCcccccccccccceeEE
Confidence            5689999999999999999999999998765  44443 3445678999999988776543321     11245789999


Q ss_pred             EeCC-ceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         115 VTKH-GGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       115 ~t~~-rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                      .+++ +.|+|+|++++|+++||+||+++
T Consensus        88 ~~~~~~~~~f~a~s~ee~~~Wi~ai~~~  115 (116)
T d1x1ga1          88 ITKDDTHYYIQASSKAERAEWIEAIKKL  115 (116)
T ss_dssp             CCTTCCCEEECCSSHHHHHHHHHHHHHH
T ss_pred             EeCCCeEEEEECCCHHHHHHHHHHHHhh
Confidence            8875 67999999999999999999986

>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: DCC-interacting protein 13-alpha, APPL1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.5e-24  Score=150.44  Aligned_cols=92  Identities=13%  Similarity=0.330  Sum_probs=72.1

Q ss_pred             ceeEEeEEEeeeC---CCCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC--c
Q psy7933          45 VVSRKGYLNILEQ---KTNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH--G  119 (171)
Q Consensus        45 ~v~k~GwL~K~g~---~~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~--r  119 (171)
                      .+.|+|||+|+..   ..+.|+||||||+++.|+||++.++ .+.+.|+|.+|.|...++.    .+.++|.|.+.+  +
T Consensus         4 ~~~k~G~L~k~~~~g~~~k~W~kRwfvL~~~~L~y~~~~~~-~~~~~i~l~~~~v~~~~~~----~~~~~f~i~~~~~~~   78 (101)
T d2elba2           4 LTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARGDV-AGGLAMDIDNCSVMAVDCE----DRRYCFQITSFDGKK   78 (101)
T ss_dssp             CSCCEEEEEECSCCC----CCCEEEEEEETTEEEEECTTCC-CE----EEEECCCCCCCCC----CSSSSSEECCCSSSC
T ss_pred             CccEeEEEEEeccCCCCccccEEEEEEEeCCEEEEEccCCc-ccceEEEeccccccccccc----CCcceEEEEeecccc
Confidence            4679999999864   2458999999999999999987654 7888999988877655432    578999998854  7


Q ss_pred             eEEEEeCCHHHHHHHHHHHHHH
Q psy7933         120 GYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~~  141 (171)
                      +|+|+|+|++|+++||.||+.+
T Consensus        79 ~~~l~A~s~~e~~~Wi~al~~v  100 (101)
T d2elba2          79 SSILQAESKKDHEEWICTINNI  100 (101)
T ss_dssp             CCCEECSSHHHHHHHHHHHHHT
T ss_pred             eEEEECCCHHHHHHHHHHHHhc
Confidence            8999999999999999999975

>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=2.8e-22  Score=145.06  Aligned_cols=97  Identities=14%  Similarity=0.336  Sum_probs=74.4

Q ss_pred             eeEEeEEEeeeC-CCCCceEEEEEEe--CCcEEEecCCCCCccce-----EEECCCeEEEeecchhhhcCCCcEEEEEeC
Q psy7933          46 VSRKGYLNILEQ-KTNGWKKRWVAVR--RPYVFIFRDEKDPVERA-----LVNLATAQVEYSEDQQAMVRVPFSFSVVTK  117 (171)
Q Consensus        46 v~k~GwL~K~g~-~~~~WkrRWFVL~--~~~L~yYk~~~d~~~~g-----~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~  117 (171)
                      ..++|||.|++. ..+.|+||||||.  ++.|+||+++.+..+.|     .|.+..+...............++|.|.++
T Consensus        15 ~~~~GyL~k~~~~~~k~WkrRwFvL~~~~~~L~yy~~~~~~~~~g~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (126)
T d1v5pa_          15 NRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVINAL   94 (126)
T ss_dssp             CCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEECS
T ss_pred             CceeeeEEEECCCCCCCeeEEEEEEEcCCCeEEEeeccccccccceeecccceeeeeeccccccccccccccceEEEcCC
Confidence            357899999985 4569999999995  67899999887766554     455554433322222212345789999999


Q ss_pred             CceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         118 HGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       118 ~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      .+.|+|+|+|++|+++||+||+.++
T Consensus        95 ~r~~~l~Aes~~e~~~Wi~aL~~A~  119 (126)
T d1v5pa_          95 SQRYFLQANDQKDLKDWVEALNQAS  119 (126)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred             CeeEEEECCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999999875

>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SH2 and PH domain-containing adapter protein APS
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=3.9e-23  Score=153.11  Aligned_cols=100  Identities=19%  Similarity=0.308  Sum_probs=79.1

Q ss_pred             CceeEEeEEEeee--------CCCCCceEEEEEEeCC------cEEEecCCCCCccceEEECCCeEEEeecchhhhcCCC
Q psy7933          44 PVVSRKGYLNILE--------QKTNGWKKRWVAVRRP------YVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVP  109 (171)
Q Consensus        44 ~~v~k~GwL~K~g--------~~~~~WkrRWFVL~~~------~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~  109 (171)
                      .++.|+|||.++-        ...+.|+||||||++.      .|+||+++++.++.+.|.|..+.............++
T Consensus        16 ~~v~keG~L~~~~~~~~~~~~~~~~~WkkrwfvL~~~~~~~~~~L~yy~~~~~~k~~g~i~l~~~~~~~~~~~~~~~~~~   95 (136)
T d1v5ma_          16 VDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKD   95 (136)
T ss_dssp             CSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTCCBCCCCCCSSSCCCT
T ss_pred             ceeeEEEEEEeeccccccCCCCCCCCceEEEEEEeCCcccchhhhhhhCcccccCcCcceecccceeeeeeccccCCCCC
Confidence            3777999997642        2345899999999975      4889999999999999999875432211111134689


Q ss_pred             cEEEEEeCCc-eEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         110 FSFSVVTKHG-GYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       110 ~~F~I~t~~r-t~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      |+|.|.|+++ .|+|+|+|++||++||++|+.++.
T Consensus        96 ~~F~l~t~~~~~y~f~A~s~~e~~~Wv~ai~~ai~  130 (136)
T d1v5ma_          96 NTFVLKVENGAEYILETIDSLQKHSWVADIQGCVD  130 (136)
T ss_dssp             TEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence            9999999875 599999999999999999999875

>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: KIAA1914
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.2e-22  Score=141.02  Aligned_cols=89  Identities=22%  Similarity=0.430  Sum_probs=76.9

Q ss_pred             EEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC-CccceEEECCCeEEEeecchhhhcCCCcEEEEEeC-CceEEEEe
Q psy7933          48 RKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD-PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK-HGGYLMQT  125 (171)
Q Consensus        48 k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d-~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~-~rt~~f~A  125 (171)
                      ++|||.|.+.  ..|+||||||+++.|+||+++.+ ..+.+.|+|.++.|...++.    +++++|.|.++ .++|+|+|
T Consensus         3 ~s~yl~~~~~--~~WkkR~fvL~~~~L~yyk~~~~~~~~~~~i~l~~~~v~~~~~~----~~~~~f~~~~~~~~~~~l~A   76 (95)
T d2cofa1           3 TSSYLNVLVN--SQWKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCEVVPDPSP----DHLYSFRILHKGEELAKLEA   76 (95)
T ss_dssp             TCCEEEEEET--TEEEEEEEEECSSCEEEECSSTTCSEEEEEECTTTCEEECCCBT----TBSCEEEEEETTEEEEEEEC
T ss_pred             cccchhhhcC--CCceEEEEEEECCEEEEEecccccccccccccccceEEEecccc----cceecceeccccceeEEeeC
Confidence            6899999985  57999999999999999998764 46789999999988765543    47899998875 58899999


Q ss_pred             CCHHHHHHHHHHHHHHh
Q psy7933         126 AGAREVHEWLYAINPLL  142 (171)
Q Consensus       126 ~s~~E~~~WI~aI~~~~  142 (171)
                      +|++||++||.+|+...
T Consensus        77 ~s~~e~~~Wi~~L~~~t   93 (95)
T d2cofa1          77 KSSEEMGHWLGLLLSES   93 (95)
T ss_dssp             SSHHHHHHHHHHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHh
Confidence            99999999999999864

>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Mouse (Mus musculus), brain [TaxId: 10090]

Probab=99.84  E-value=5.9e-21  Score=133.76  Aligned_cols=91  Identities=21%  Similarity=0.384  Sum_probs=74.8

Q ss_pred             EEeEEEeeeC--------CCCCceEEEEEEeCCcEEEecCCCC------CccceEEECCCeEEEeecchhhhcCCCcEEE
Q psy7933          48 RKGYLNILEQ--------KTNGWKKRWVAVRRPYVFIFRDEKD------PVERALVNLATAQVEYSEDQQAMVRVPFSFS  113 (171)
Q Consensus        48 k~GwL~K~g~--------~~~~WkrRWFVL~~~~L~yYk~~~d------~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~  113 (171)
                      ++|||+++..        ..+.|++|||||+++.|+||+++.+      ..+.+.|+|.++.+....+.   ..++|+|.
T Consensus         1 ~eG~L~rk~~~~~~~kk~~~~~Wk~r~~vL~~~~L~~yk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~---~~~~~~f~   77 (106)
T d1btna_           1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDY---KKKKHVFK   77 (106)
T ss_dssp             CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSC---CSSSSEEE
T ss_pred             CeeeEEEeeEccCCCcccCCCCCcEEEEEEECCEEEEEeChhhcccccccCcceeEEeccceeeecccc---ccCcceEe
Confidence            4899999852        2347999999999999999998753      34577899998887665542   36789999


Q ss_pred             EEeCC-ceEEEEeCCHHHHHHHHHHHHHH
Q psy7933         114 VVTKH-GGYLMQTAGAREVHEWLYAINPL  141 (171)
Q Consensus       114 I~t~~-rt~~f~A~s~~E~~~WI~aI~~~  141 (171)
                      |.+.+ ++|+|+|+|++|+++||++|+.+
T Consensus        78 i~~~~~~~~~~~a~s~~e~~~W~~ai~~A  106 (106)
T d1btna_          78 LRLSDGNEYLFQAKDDEEMNTWIQAISSA  106 (106)
T ss_dssp             EECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred             ecccCCCEEEEECCCHHHHHHHHHHHHhC
Confidence            99974 78999999999999999999863

>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Human (Homo sapiens), brain 2 isoform [TaxId: 9606]

Probab=99.84  E-value=8.3e-21  Score=136.27  Aligned_cols=99  Identities=22%  Similarity=0.333  Sum_probs=78.1

Q ss_pred             CceeEEeEEEeeeC--------CCCCceEEEEEEeCCcEEEecCCCCCc------cceEEECCCeEEEeecchhhhcCCC
Q psy7933          44 PVVSRKGYLNILEQ--------KTNGWKKRWVAVRRPYVFIFRDEKDPV------ERALVNLATAQVEYSEDQQAMVRVP  109 (171)
Q Consensus        44 ~~v~k~GwL~K~g~--------~~~~WkrRWFVL~~~~L~yYk~~~d~~------~~g~I~L~~~~V~~~~~~~~~~~r~  109 (171)
                      ..+.++|||+++..        ..+.|++|||||+++.|+||+++.+..      ..+.+++..+.+...++.   ..++
T Consensus         6 ~g~~~eG~L~rk~~~~~~~kr~~~k~Wkkrw~vL~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~   82 (123)
T d1wjma_           6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDY---RKRK   82 (123)
T ss_dssp             CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTTC---SSCS
T ss_pred             CCCeeEEEEEEEeeccccCcccCCCCCcEEEEEEECCEEEEEecchhccccccccccccccccceeEEecccc---cccC
Confidence            35678999998753        345899999999999999999765422      345566777776655442   3688


Q ss_pred             cEEEEEeC-CceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         110 FSFSVVTK-HGGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       110 ~~F~I~t~-~rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      |+|.|.+. .++|+|+|+|++||++||++|+.+++..
T Consensus        83 ~~f~i~~~~~~~~~l~a~s~~e~~~Wi~aI~~a~~~~  119 (123)
T d1wjma_          83 HVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASG  119 (123)
T ss_dssp             SEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred             cEEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence            99999886 5789999999999999999999988743

>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: beta-spectrin
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.81  E-value=1.7e-20  Score=134.87  Aligned_cols=96  Identities=17%  Similarity=0.337  Sum_probs=74.4

Q ss_pred             ceeEEeEEEeeeCC--------CCCceEEEEEEeCCcEEEecCCCCCccc--------eEEECCCeEEEeecchhhhcCC
Q psy7933          45 VVSRKGYLNILEQK--------TNGWKKRWVAVRRPYVFIFRDEKDPVER--------ALVNLATAQVEYSEDQQAMVRV  108 (171)
Q Consensus        45 ~v~k~GwL~K~g~~--------~~~WkrRWFVL~~~~L~yYk~~~d~~~~--------g~I~L~~~~V~~~~~~~~~~~r  108 (171)
                      ...++|||+++...        .++|+||||||+++.|+||+++.+..+.        +.|++.++.+....+.   ..+
T Consensus         7 ~~~~eG~L~rk~~~~~~~kk~~~~~W~kr~~vL~~~~L~yy~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~   83 (122)
T d1droa_           7 GEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDY---TKK   83 (122)
T ss_dssp             SSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSS---SSS
T ss_pred             CcceEEEEEEeecccccCcccCCCCceEEEEEEeCCEEEEEcCcccccccCcccccccceEeccceEEEecccc---ccc
Confidence            45689999988632        2379999999999999999988764433        3445555554443322   357


Q ss_pred             CcEEEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         109 PFSFSVVTKH-GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       109 ~~~F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      +++|.|.+.+ ++|+|+|+|++||++||.+|+.++.
T Consensus        84 ~~~~~l~~~~~~~~~f~a~s~~d~~~Wv~al~~~~~  119 (122)
T d1droa_          84 KHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSD  119 (122)
T ss_dssp             TTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred             cceEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence            8999999986 7799999999999999999999875

>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac/CDC42 GEF 6, alpha-pix
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=1.5e-15  Score=111.64  Aligned_cols=119  Identities=11%  Similarity=0.127  Sum_probs=90.6

Q ss_pred             cCCCCCCCCCcCCcccccccccccceecccCCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC---CccceEE
Q psy7933          13 EDSRGRPDSNEATQDTSVILYVPEIEEIRISPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD---PVERALV   89 (171)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d---~~~~g~I   89 (171)
                      .|++|+....+...=.-     +   .+.....++++|++.++....+.|+.|||+|-++.|.|+|....   ..-++.|
T Consensus         3 ~~~~~~~l~~~i~gweG-----~---~l~~~G~li~~g~~~~~~~~~~~~k~R~~fLF~~~Ll~~k~~~~~~~~~~k~~i   74 (132)
T d1v61a_           3 SGSSGQILSEPIQAWEG-----D---DIKTLGNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSGFMYQGKI   74 (132)
T ss_dssp             CCCCSSTTTSCCBTCCS-----S---CSTTTCCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSSSSCCEEEEEE
T ss_pred             CCcccchhhhccCCccC-----C---ChhhccCEEEEEEEEEEEecCCCcceEEEEEeCCEEEEEEEcCCCceeEEeeec
Confidence            35666666655543110     0   11123568899999999988899999999999999999985433   2347889


Q ss_pred             ECCCeEEEeecchhhhcCCCcEEEEEeC-CceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933          90 NLATAQVEYSEDQQAMVRVPFSFSVVTK-HGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus        90 ~L~~~~V~~~~~~~~~~~r~~~F~I~t~-~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      +|.++.|...++.   ...+|+|.|.++ .++|+|+|+|++|+++||++|++++
T Consensus        75 ~l~~~~v~~~~~~---~~~~~~f~i~~~~~~~~~l~a~s~eek~~Wv~~L~~~i  125 (132)
T d1v61a_          75 PIAGMVVNRLDEI---EGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLT  125 (132)
T ss_dssp             CTTTCBCSTTCSS---SSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             chhhccccccccc---cCccceEEEeCCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence            9999988654432   256899999987 5889999999999999999999876

>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 9, Collybistin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.28  E-value=2.8e-11  Score=90.92  Aligned_cols=100  Identities=14%  Similarity=0.077  Sum_probs=79.1

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC----CccceEEECCCeEEEeecchhhhc---CCCcEEEEE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD----PVERALVNLATAQVEYSEDQQAMV---RVPFSFSVV  115 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d----~~~~g~I~L~~~~V~~~~~~~~~~---~r~~~F~I~  115 (171)
                      ....+++|+|.+.+...+.|+.|||+|-++.|.|++....    ....+.|+|..+.|...++.+...   ..+|+|.|.
T Consensus        24 ~r~Li~eG~L~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~~~f~i~  103 (162)
T d2dfka2          24 SSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLH  103 (162)
T ss_dssp             CCCEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEE
T ss_pred             CceEEEEEEEEEEEcCCCCceeEEEEEeCCeEEEEEecCCCCCceEEccccchhhceeeecccccccccCccccceEEEE
Confidence            5678999999999888889999999999999999975432    245688999988887654422111   136889998


Q ss_pred             eC--CceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         116 TK--HGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       116 t~--~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      ..  .+.|.|+|+|++|+.+||++|+...
T Consensus       104 ~~~~~~~~~~~A~s~~eK~~W~~~l~~~~  132 (162)
T d2dfka2         104 NKETEEVHLFFAKKLEEKIRWLRAFREER  132 (162)
T ss_dssp             ESSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             ECCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence            54  5679999999999999999999754

>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Exocyst complex protein EXO84
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.21  E-value=2.3e-10  Score=80.26  Aligned_cols=98  Identities=14%  Similarity=0.077  Sum_probs=79.0

Q ss_pred             ceeEEeEEEeeeCCCC-CceEEEEEEeCCcEEEecCCCC----CccceEEECCCeEEEeecchhhhcCCCcEEEEEeCCc
Q psy7933          45 VVSRKGYLNILEQKTN-GWKKRWVAVRRPYVFIFRDEKD----PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKHG  119 (171)
Q Consensus        45 ~v~k~GwL~K~g~~~~-~WkrRWFVL~~~~L~yYk~~~d----~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~r  119 (171)
                      ..+++|-|.+...... .-++|++.|-++.|.|.+...+    ......|+|.++.|+..++.+   ..+|+|.|.++.+
T Consensus         3 ~li~eG~l~~~~~~~~k~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~l~~~~v~~~~d~~---~~~n~f~i~~~~~   79 (109)
T d1zc3b1           3 YLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNP---PMKDMFKLLMFPE   79 (109)
T ss_dssp             CEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBT---TBSSEEEEEETTE
T ss_pred             EEEEeeeEEEEccCCCCcceeEEEEEecCEEEEEEEcCCcceEEEeeeEEeccceEEEEeeccc---ccceEEEEccCCC
Confidence            4689999998876554 5678999999999988864322    245678999999887655433   3579999999999


Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         120 GYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      +|.|+|+|.+|+.+||++|++++...
T Consensus        80 ~~~~~a~s~~eK~~W~~~l~~a~~~~  105 (109)
T d1zc3b1          80 SRIFQAENAKIKREWLEVLEETKRAL  105 (109)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEECCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999987543

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.18  E-value=5.4e-11  Score=84.88  Aligned_cols=96  Identities=14%  Similarity=0.231  Sum_probs=64.4

Q ss_pred             eeEEeE-EEeeeCCCCCceEEEEEEeCC-cEEEecCCCC--CccceEEECCCeE-EEeecchhh------hcCCCcEEEE
Q psy7933          46 VSRKGY-LNILEQKTNGWKKRWVAVRRP-YVFIFRDEKD--PVERALVNLATAQ-VEYSEDQQA------MVRVPFSFSV  114 (171)
Q Consensus        46 v~k~Gw-L~K~g~~~~~WkrRWFVL~~~-~L~yYk~~~d--~~~~g~I~L~~~~-V~~~~~~~~------~~~r~~~F~I  114 (171)
                      .+++|. |.|-+ ..+.+++|||+|..+ .+.||++.++  ....+.|+|.++. |....+...      .....+||.|
T Consensus        10 ~l~~G~~l~K~~-~~~~~k~R~f~L~~d~~~i~~~~~~~~~~~~~~~i~i~~I~~V~~G~~s~~~~~~~~~~~~~~~FsI   88 (119)
T d1maia_          10 ALLKGSQLLKVK-SSSWRRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSI   88 (119)
T ss_dssp             HHHHCEEEEEES-SSSCEEEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEE
T ss_pred             HHHcCCeEEEeC-CCCCCEEEEEEEcCCCCEEEEeCCCCCCCccceEEEHHHceEEEcCCCCchhhhcccCCCcCceEEE
Confidence            456774 55543 333446799999754 5556765543  3457899998874 333222110      1123578998


Q ss_pred             E--eCCceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         115 V--TKHGGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       115 ~--t~~rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      +  +..+++.|.|+|++|++.||.+|+.++
T Consensus        89 v~~~~~r~l~l~a~s~~~~~~Wv~~L~~L~  118 (119)
T d1maia_          89 VFKDQRNTLDLIAPSPADAQHWVQGLRKII  118 (119)
T ss_dssp             EESSSCCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             EEcCCCcEEEEEECCHHHHHHHHHHHHHHh
Confidence            8  556899999999999999999999876

>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Son of sevenless-1 (sos-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=9.7e-10  Score=79.50  Aligned_cols=93  Identities=14%  Similarity=0.248  Sum_probs=73.8

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC-----------ccceEEECCCeEEEeecchhhhcCCCcE
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP-----------VERALVNLATAQVEYSEDQQAMVRVPFS  111 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~-----------~~~g~I~L~~~~V~~~~~~~~~~~r~~~  111 (171)
                      ....+++|.|.+.+..    +.|||.|-++.|.|.+...+.           .-++.|+|.++.|...++.+   ..+|+
T Consensus        24 gr~li~eG~l~~~~~~----k~r~~fLF~d~Li~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~~~---~~~~~   96 (133)
T d1dbha2          24 CNEFIMEGTLTRVGAK----HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN---EYKHA   96 (133)
T ss_dssp             CCCEEEEEEEEETTCS----SCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSS---SCCSE
T ss_pred             CcEEEEEeEEEEecCC----CeEEEEEecCeEEEEEecccccccccCCCccEEEEeeeecccccccccCCCc---ccccc
Confidence            4578999999987643    689999999999999854321           23578999999986554432   46789


Q ss_pred             EEEEeCC-ceEEEEeCCHHHHHHHHHHHHHHh
Q psy7933         112 FSVVTKH-GGYLMQTAGAREVHEWLYAINPLL  142 (171)
Q Consensus       112 F~I~t~~-rt~~f~A~s~~E~~~WI~aI~~~~  142 (171)
                      |.|.++. +.|.|+|+|++|+.+||++|..+.
T Consensus        97 f~i~~~~~~~~~l~a~s~~eK~~W~~~l~~~~  128 (133)
T d1dbha2          97 FEIILKDENSVIFSAKSAEEKNNWMAALISLQ  128 (133)
T ss_dssp             EEECCTTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             eeEEcCCCcEEEEEECCHHHHHHHHHHHHHHH
Confidence            9998864 679999999999999999998754

>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: GEF of intersectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=2.8e-09  Score=77.90  Aligned_cols=99  Identities=13%  Similarity=0.140  Sum_probs=71.6

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC-----------------ccceEEECCCeEEEeecchhhhc
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP-----------------VERALVNLATAQVEYSEDQQAMV  106 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~-----------------~~~g~I~L~~~~V~~~~~~~~~~  106 (171)
                      ...+++|-|.|....    +.|+|.|-++.|.|-+...+.                 ..+..|.|..+.|....+.   .
T Consensus        23 R~li~eG~L~k~~~~----k~r~~FLFnD~Ll~tK~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~l~v~~~~d~---~   95 (142)
T d1ki1b2          23 RKFLHSGKLYKAKNN----KELYGFLFNDFLLLTQITKPLGSSGTDKVFSPKSNLQYMYKTPIFLNEVLVKLPTDP---S   95 (142)
T ss_dssp             CCEEEECCCBCSSSC----CCCEEEEESSEEEEEEEECC-------CCSCSSCCEEEECSSCEEGGGEEEECCSSS---C
T ss_pred             eEEEEeeEEEEecCC----CEEEEEEecCEEEEEEeccccceeccccccccCCceeEEEEcccchhhheeeccCCc---c
Confidence            468899999875322    589999999999987643321                 1234467777766544332   2


Q ss_pred             CCCcEEEEEeCCceEEEEeCCHHHHHHHHHHHHHHhhhhhhcc
Q psy7933         107 RVPFSFSVVTKHGGYLMQTAGAREVHEWLYAINPLLAGQIRSK  149 (171)
Q Consensus       107 ~r~~~F~I~t~~rt~~f~A~s~~E~~~WI~aI~~~~~~~~~~~  149 (171)
                      .-.+.|.+..+++.|.|+|+|++|+.+||++|++++...+..+
T Consensus        96 ~~~~~~~~~~~~~~~~l~a~s~~ek~~W~~~I~~Ai~~~~e~~  138 (142)
T d1ki1b2          96 GDEPIFHISHIDRVYTLRAESINERTAWVQKIKAASELYIETE  138 (142)
T ss_dssp             CC---CEEEETTEEEECBCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeEEEecCCCEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            3457888999999999999999999999999999998776544

>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Triple functional domain protein TRIO
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=4.8e-08  Score=69.15  Aligned_cols=97  Identities=9%  Similarity=0.187  Sum_probs=71.9

Q ss_pred             CceeEEeEEEeeeCC--CCCceEEEEEEeCCcEEEecCCCCC------ccceEEECCCeEEEeecchhhhcCCCcEEEEE
Q psy7933          44 PVVSRKGYLNILEQK--TNGWKKRWVAVRRPYVFIFRDEKDP------VERALVNLATAQVEYSEDQQAMVRVPFSFSVV  115 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~--~~~WkrRWFVL~~~~L~yYk~~~d~------~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~  115 (171)
                      ...+++|.|.-..+.  .+..+.|+|.|-++.|.|-|-....      ..+..|.+..+.+....+     +.++.|.|.
T Consensus        11 G~Ll~~g~l~v~~~~~~~~k~~~R~~FLF~d~Ll~~K~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~f~i~   85 (121)
T d1ntya2          11 GELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVE-----GDPCKFALW   85 (121)
T ss_dssp             CCEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCCT-----TCTTEEEEE
T ss_pred             CcEEEEeEEEEEcccccCCCCcEEEEEeeCCeEEEEEEecCCCCCceeEEEeeEEecceEEEEcCC-----CCCceEEEE
Confidence            458899998755543  3478999999999999998633221      234557777776653332     357899986


Q ss_pred             e-----CCceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         116 T-----KHGGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       116 t-----~~rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      .     +...|.|+|.|++|++.||++|++++..+
T Consensus        86 ~~~~~~~~~~~~l~a~s~~eK~~W~~~I~~~i~eq  120 (121)
T d1ntya2          86 VGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER  120 (121)
T ss_dssp             ESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred             EecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhh
Confidence            4     35679999999999999999999988754

>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=6.8e-07  Score=64.51  Aligned_cols=94  Identities=7%  Similarity=0.126  Sum_probs=65.5

Q ss_pred             CceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCCc------------------cceEEECCCeEEEeecchhhh
Q psy7933          44 PVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDPV------------------ERALVNLATAQVEYSEDQQAM  105 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~~------------------~~g~I~L~~~~V~~~~~~~~~  105 (171)
                      ...+++|-|..+. ..+..+.|+|.|-++.|.|-+...+..                  ....+.+..+.+....     
T Consensus        23 R~Li~eG~L~~k~-~~~k~k~r~~FLF~D~Ll~tk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----   96 (140)
T d1xcga2          23 RKMIHEGPLTWRI-SKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVA-----   96 (140)
T ss_dssp             SCEEEEEEEEECC-SSSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECS-----
T ss_pred             ceEEEEeeEEEEe-cCCCceEEEEEEecCeEEEEEecccceeeccccccccccccceeeecceEecceEEEecCC-----
Confidence            4789999996443 346778999999999999887553310                  1122333333332221     


Q ss_pred             cCCCcEEEEEe-----CCceEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         106 VRVPFSFSVVT-----KHGGYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       106 ~~r~~~F~I~t-----~~rt~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                       ..+++|.|+.     ....|.|+|+|++|..+||++|++++..
T Consensus        97 -~~~~~f~li~~~~~~~~~~~~l~A~s~~eK~~Wi~~i~~aI~n  139 (140)
T d1xcga2          97 -TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN  139 (140)
T ss_dssp             -SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCeEEEEEcCCCCCceEEEEEcCCHHHHHHHHHHHHHHHHc
Confidence             3467888865     2467999999999999999999998753

>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 12
species: Human (Homo sapiens), gamma isoform [TaxId: 9606]

Probab=98.55  E-value=5.1e-07  Score=63.56  Aligned_cols=91  Identities=13%  Similarity=0.126  Sum_probs=65.7

Q ss_pred             eEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCCC------------------ccceEEECCCeEEEeecchhhhcCC
Q psy7933          47 SRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKDP------------------VERALVNLATAQVEYSEDQQAMVRV  108 (171)
Q Consensus        47 ~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d~------------------~~~g~I~L~~~~V~~~~~~~~~~~r  108 (171)
                      +++|-|..+.+.. .=+.|++.|-++.|.|-+...+.                  .-...|.|..+.|....+     +.
T Consensus         2 i~eG~L~~~~~~~-k~~er~vFLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~l~v~e~~~-----d~   75 (114)
T d1txda2           2 IHEGPLVWKVNRD-KTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVAT-----DN   75 (114)
T ss_dssp             EEEEEEEEESSSS-CBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC------C
T ss_pred             ceeeeEEEEecCC-CceEEEEEEecCeEEEEEecccccccccccccccccccceeeecCcEEcccEEEEEcCC-----CC
Confidence            6799997554333 34689999999988888754431                  113357777776654322     34


Q ss_pred             CcEEEEEeCC---ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         109 PFSFSVVTKH---GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       109 ~~~F~I~t~~---rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                      ++.|.|.+.+   ..|.|+|.|.+|.+.||++|+++++
T Consensus        76 ~~~fli~~~~~~~~~y~l~A~s~~eK~~W~~~I~~~~~  113 (114)
T d1txda2          76 KALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAA  113 (114)
T ss_dssp             CEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEecCCCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence            6889998754   3599999999999999999999875

>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: UNC-89
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.38  E-value=8.5e-07  Score=63.57  Aligned_cols=95  Identities=9%  Similarity=0.038  Sum_probs=69.7

Q ss_pred             CCceeEEeEEEeeeCCCCCceEEEEEEeCCcEEEecCCCC-----CccceEEECCCeEEEeecchhhhcCCCcEEEEEeC
Q psy7933          43 SPVVSRKGYLNILEQKTNGWKKRWVAVRRPYVFIFRDEKD-----PVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTK  117 (171)
Q Consensus        43 ~~~v~k~GwL~K~g~~~~~WkrRWFVL~~~~L~yYk~~~d-----~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~  117 (171)
                      -..++.+|++....+..+.+ .|+|.|-++.|.|+|....     ..-++.|+|.++.|....      +.++.|+|...
T Consensus         7 ~G~ll~~~~f~v~~~~~k~k-~R~vFLF~~~ll~~K~~~~~~~~~y~~K~~i~l~~~~v~e~~------gd~~~F~i~~~   79 (119)
T d1fhoa_           7 LGRIIRHDAFQVWEGDEPPK-LRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHT------TDEDTIVLQPQ   79 (119)
T ss_dssp             CCCSSEEEEEEECSTTCSCE-EEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEEC------TTCCEEEEECC
T ss_pred             CCceEEEeEEEEEeCCCCce-EEEEEEEcCeEEEEEeccCCCCceEEEecEEECCceEEEEcC------CCCcEEEEEeC
Confidence            35677888888776554444 5788888888888875432     234788999999886433      34578999865


Q ss_pred             Cc-------eEEEEeCCHHHHHHHHHHHHHHhhh
Q psy7933         118 HG-------GYLMQTAGAREVHEWLYAINPLLAG  144 (171)
Q Consensus       118 ~r-------t~~f~A~s~~E~~~WI~aI~~~~~~  144 (171)
                      +.       ++.++|.|+++++.||++|.+.+..
T Consensus        80 ~~~~~~~~~~~~~~a~s~~~K~~Wv~~I~e~~~~  113 (119)
T d1fhoa_          80 EPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEK  113 (119)
T ss_dssp             STTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHH
T ss_pred             CCCCCcceEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence            32       4677889999999999999887653

>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dbl's big sister, Dbs
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.28  E-value=5e-06  Score=60.85  Aligned_cols=98  Identities=12%  Similarity=0.202  Sum_probs=70.8

Q ss_pred             CceeEEeEEEeeeCC-----------CCCceEEEEEEeCCcEEEecCCCC----------CccceEEECCCeEEEeecch
Q psy7933          44 PVVSRKGYLNILEQK-----------TNGWKKRWVAVRRPYVFIFRDEKD----------PVERALVNLATAQVEYSEDQ  102 (171)
Q Consensus        44 ~~v~k~GwL~K~g~~-----------~~~WkrRWFVL~~~~L~yYk~~~d----------~~~~g~I~L~~~~V~~~~~~  102 (171)
                      ...+++|.|.-..+.           ...=+.|+|.|-+..|.|-|....          ..-++.|.+.++.|....+ 
T Consensus        11 G~Ll~qg~~~v~~~~~~~~~~~~~~~~~K~~~R~~FLF~~~Li~cK~~~~~~~~~~~~~~y~~k~~~~~~~~~v~~~~~-   89 (147)
T d1kz7a2          11 GKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVK-   89 (147)
T ss_dssp             CCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBT-
T ss_pred             CCEEEeeeEEEEecCccchhhhhhhhccCCceEEEEEecCcEEEEEecccCCcccccCceEEEeeEEecCCceeEecCC-
Confidence            457888998643322           113478999999999999874322          1235677788877764333 


Q ss_pred             hhhcCCCcEEEEEe--CCceEEEEeCCHHHHHHHHHHHHHHhhhhh
Q psy7933         103 QAMVRVPFSFSVVT--KHGGYLMQTAGAREVHEWLYAINPLLAGQI  146 (171)
Q Consensus       103 ~~~~~r~~~F~I~t--~~rt~~f~A~s~~E~~~WI~aI~~~~~~~~  146 (171)
                          +.++.|.+..  +...|.|+|.|.+|+..||++|++++..+.
T Consensus        90 ----~~~~~f~~~~~~~~~~~~l~a~s~eeK~~W~~~I~~~l~~q~  131 (147)
T d1kz7a2          90 ----GDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQL  131 (147)
T ss_dssp             ----TBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCcceEEEEeCCCCcEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence                3567787765  567799999999999999999999887665

>d2adza1 b.55.1.1 (A:1-43,A:117-178) Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Alpha-1-syntrophin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.67  E-value=0.00084  Score=46.32  Aligned_cols=93  Identities=14%  Similarity=0.217  Sum_probs=70.7

Q ss_pred             ceeEEeEEEeeeCC-----CCCceEEEEEEeCCcEEEecCCCCCccceEEECCCeEEEeecchhhhcCCCcEEEEEeCC-
Q psy7933          45 VVSRKGYLNILEQK-----TNGWKKRWVAVRRPYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMVRVPFSFSVVTKH-  118 (171)
Q Consensus        45 ~v~k~GwL~K~g~~-----~~~WkrRWFVL~~~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t~~-  118 (171)
                      ..-|.|.|..+-+.     ...|.|--..|.++.|.+--    ......|+|.-|-|...-...+  --...|+|.+++ 
T Consensus         5 ra~rsGlLE~~~~~~~~~~~~rW~rVl~~L~ed~Lt~s~----~~d~k~IPLKmcyvtR~~~~~D--~EnR~lElhSpDG   78 (105)
T d2adza1           5 RAPRTGLLELRCGAGSGAGGERWQRVLLSLAEDALTVSP----LSEAKHVSLKMAYVSRRCTPTD--PEPRYLEICAADG   78 (105)
T ss_dssp             CCCEEEEEEECCCCSSSSSCCCCEEEEEEEETTEEEEES----SCSCEEEETTTCEEEEECCSSC--CSSCEEEEEETTT
T ss_pred             cCCccceEEEeeccCCCccccceeeeeeecccceEEeec----ccccceeeeeeEEeeecccCCC--CcccEEEEECCCC
Confidence            34589999988543     34899999999999987763    2357789999988765321110  124689999986 


Q ss_pred             -ceEEEEeCCHHHHHHHHHHHHHHhh
Q psy7933         119 -GGYLMQTAGAREVHEWLYAINPLLA  143 (171)
Q Consensus       119 -rt~~f~A~s~~E~~~WI~aI~~~~~  143 (171)
                       .+.+|.|.+..+.+.|..+|+..+.
T Consensus        79 ~~t~iLR~kD~a~A~~WF~Aihs~i~  104 (105)
T d2adza1          79 QDAVFLRAKDEASARSWAGAIQAQIG  104 (105)
T ss_dssp             TEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEcCCHHHHHHHHHHHHHhhc
Confidence             4589999999999999999998763

>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.011  Score=41.93  Aligned_cols=98  Identities=11%  Similarity=0.038  Sum_probs=61.5

Q ss_pred             eeEEeEEEee-eCCCCCceEEEEEEeC-CcEEEecCCCCCccceEEECCCeEEEeecchhhhc-----------------
Q psy7933          46 VSRKGYLNIL-EQKTNGWKKRWVAVRR-PYVFIFRDEKDPVERALVNLATAQVEYSEDQQAMV-----------------  106 (171)
Q Consensus        46 v~k~GwL~K~-g~~~~~WkrRWFVL~~-~~L~yYk~~~d~~~~g~I~L~~~~V~~~~~~~~~~-----------------  106 (171)
                      .+.+|-.+.+ .+....-+.+.|.|+. +...||++++  +....|+|..+.-...-...+..                 
T Consensus         6 ~L~~G~~f~K~~~~~~~~~~~~frlD~~g~~L~W~~~~--k~~~~l~i~~I~evR~G~~~~~~k~~kl~~~~~~~~~~~~   83 (131)
T d2zkmx3           6 YLSQGERFIKWDDETTVASPVILRVDPKGYYLYWTYQS--KEMEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNS   83 (131)
T ss_dssp             HHHHCEEEEEECTTTCCEEEEEEEECTTSCEEEEEETT--SCEEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCC
T ss_pred             HHhCCCeEEEEcCCCCccceEEEEECCCCCEEEEECCC--CceeEEEecceeeEEeccccCCccHHHHhhhhhccCcCCC
Confidence            3455554444 4444567778898974 3344455543  34567888877433321100000                 


Q ss_pred             CCCcEEEEEeC-----CceEEEEeCCHHHHHHHHHHHHHHhhhh
Q psy7933         107 RVPFSFSVVTK-----HGGYLMQTAGAREVHEWLYAINPLLAGQ  145 (171)
Q Consensus       107 ~r~~~F~I~t~-----~rt~~f~A~s~~E~~~WI~aI~~~~~~~  145 (171)
                      --..||.|+.+     -+...|.|.++++++.|+..|+.++..-
T Consensus        84 ~e~~~ftIvyg~~~v~l~~l~lVA~s~~~a~~W~~gL~~L~~n~  127 (131)
T d2zkmx3          84 FLLKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKHP  127 (131)
T ss_dssp             GGGTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHCT
T ss_pred             ccccEEEEEECCCcccceEEEEEeCCHHHHHHHHHHHHHHHhhH
Confidence            12359999874     2678899999999999999999987543

>d1foea2 b.55.1.1 (A:1240-1401) GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: GEF of TIAM1 (T-Lymphoma invasion and metastasis inducing protein 1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.22  E-value=0.075  Score=38.81  Aligned_cols=79  Identities=11%  Similarity=0.220  Sum_probs=57.0

Q ss_pred             EEEeCCcEEEecCCCCC----------------c---cceEEECCCeEEEeecchhhhcCCCcEEEEEe--------CCc
Q psy7933          67 VAVRRPYVFIFRDEKDP----------------V---ERALVNLATAQVEYSEDQQAMVRVPFSFSVVT--------KHG  119 (171)
Q Consensus        67 FVL~~~~L~yYk~~~d~----------------~---~~g~I~L~~~~V~~~~~~~~~~~r~~~F~I~t--------~~r  119 (171)
                      ||.+.--++.|++....                +   =+..|++....|......+  ..-.++++|++        +.+
T Consensus        55 FVFK~AVV~vcke~sk~KkKl~~~~~~~~~~e~d~~rFr~mIP~~alQVR~~~~~~--~es~~vwEiiH~kSe~egRpE~  132 (162)
T d1foea2          55 FVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEALQVRALPSAD--AEANAVCEIVHVKSESEGRPER  132 (162)
T ss_dssp             EEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGEEEECCCCTT--TTSCCEEEEEECCBTGGGBCCE
T ss_pred             EEecceEEEEEcccchhhhhccCccccccccccCceeEEEEeeeeeeEeecccccC--CCcceEEEEEeecccccCCcce
Confidence            77777777777753211                1   2347888877776543321  23568999986        357


Q ss_pred             eEEEEeCCHHHHHHHHHHHHHHhhhhhh
Q psy7933         120 GYLMQTAGAREVHEWLYAINPLLAGQIR  147 (171)
Q Consensus       120 t~~f~A~s~~E~~~WI~aI~~~~~~~~~  147 (171)
                      .|.|++.+.+..+..|++|+..+.+..|
T Consensus       133 vfqlc~St~E~K~~flK~Ir~ilre~~r  160 (162)
T d1foea2         133 VFHLCCSSPESRKDFLKSVHSILRDKHR  160 (162)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence            8999999999999999999999877664

>d1zsqa1 b.55.1.8 (A:74-198) Myotubularin-related protein 2, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: GRAM domain
domain: Myotubularin-related protein 2, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.24  E-value=3.4  Score=28.05  Aligned_cols=76  Identities=13%  Similarity=0.098  Sum_probs=46.5

Q ss_pred             EEEeCCcEEEecCCCCCccceEEECCCeE-EEeecchhhhcCCCcEEEEEeCC-ceEEEEeC-CHHHHHHHHHHHHHHh
Q psy7933          67 VAVRRPYVFIFRDEKDPVERALVNLATAQ-VEYSEDQQAMVRVPFSFSVVTKH-GGYLMQTA-GAREVHEWLYAINPLL  142 (171)
Q Consensus        67 FVL~~~~L~yYk~~~d~~~~g~I~L~~~~-V~~~~~~~~~~~r~~~F~I~t~~-rt~~f~A~-s~~E~~~WI~aI~~~~  142 (171)
                      +.|.+..|.+-..+.+......|+|..+. |+.......-....+.+.|.+.+ |.+.|..+ ...+.++|.++|+...
T Consensus        32 L~lTnyrliF~~~~~~~~~~~~ipl~~I~~v~k~~~~~~~~~~~~~L~I~CKDfr~~~f~f~~e~~~~~~v~~~L~~~a  110 (125)
T d1zsqa1          32 LTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTRRSIFENLMKYA  110 (125)
T ss_dssp             EEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEETTTEEEEEECCGGGCCHHHHHHHHHHHS
T ss_pred             EEEEeeEEEEEcCCCCccEEEEeccceeeeeeecccccccCCccccEEEEeccCeEEEEEEcCCccHHHHHHHHHHHhC
Confidence            44666666555455554555667777653 32222111011245689999987 88888764 4366778999998865