Psyllid ID: psy7936

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220--
Protein Sequence
MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFPFELKGKGKSTFD
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccccccccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccHHHHHHcEEccccccccccccccccccccHHHccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccEEcccEcccccEEEEcccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHcHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHccccccEEEEEccHHHHHHHHHHHHHHHccccccEEEcccccEEEEEccccccccEEEEEEEcccHccccccEcccccccccccccccHHHHHHcccc
Coil and Loop (DISEMBL)
msaskavsasrldgktviITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFevatsedkkpgeVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYaipgknvnvyavhpgivktelgrymddtyfpgaRTLGRVLMWWwmktpeqgaqTTLHCaldegaaketglyysdykvaksrnfpfelkgkgkstfd
Flexible Loop (DISEMBL)
msaskavsasrldgktviitgcntgigkvTAQTLYGIGAKVIMACRDVEKAETTASEirkhfevatsedkkpgevLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYkvaksrnfpfelkgkgkstfd
Low Complexity Region (SEG)
MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFPFELKGKGKSTFD
Disordered region (IsUnstruct)
*************GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE*********************EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAKSR***************
Disordered Region (DISOPRED)
*******SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEV***EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFPFELKGKGKSTFD
Disordered Region (DISEMBL)
***********LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFPFELK********
Disordered Region (DISPRO)
***SKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKV*******************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFPFELKGKGKSTFD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	222	2.2.26 [Sep-21-2011]
Q9HBH5	336	Retinol dehydrogenase 14	yes	N/A	0.441	0.291	0.427	8e-19
Q96NR8	316	Retinol dehydrogenase 12	no	N/A	0.409	0.287	0.525	2e-18
Q8BYK4	316	Retinol dehydrogenase 12	yes	N/A	0.409	0.287	0.515	4e-18
Q9ERI6	334	Retinol dehydrogenase 14	no	N/A	0.441	0.293	0.44	5e-18
P59837	316	Retinol dehydrogenase 12	no	N/A	0.409	0.287	0.515	1e-17
Q8TC12	318	Retinol dehydrogenase 11	no	N/A	0.454	0.317	0.458	4e-17
Q9QYF1	316	Retinol dehydrogenase 11	no	N/A	0.454	0.319	0.458	1e-16
Q8CEE7	334	Retinol dehydrogenase 13	no	N/A	0.423	0.281	0.490	2e-16
Q8NBN7	331	Retinol dehydrogenase 13	no	N/A	0.400	0.268	0.476	2e-15
Q17QU7	377	Dehydrogenase/reductase S	no	N/A	0.405	0.238	0.397	2e-12

>sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1

 Score = 94.0 bits (232), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 67/103 (65%), Gaps = 5/103 (4%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           + GKTV+ITG N+G+G+ TA  L  +GA+VIM CRD  +AE  A ++R+    A     +
Sbjct: 41  MHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPE 100

Query: 72  P-----GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           P     GE+++++LDLAS +S+R   Q++ Q E  + +LINNA
Sbjct: 101 PGVSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNA 143

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. No steroid dehydrogenase activity detected.
Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q96NR8|RDH12_HUMAN Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3

 Score = 92.8 bits (229), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 8/99 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           +L GK V+ITG NTGIGK TA+ L   GA+V +ACRDV K E+ ASEIR         D 
Sbjct: 36  QLPGKVVVITGANTGIGKETARELASRGARVYIACRDVLKGESAASEIRV--------DT 87

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           K  +VL++KLDL+  KSIR  A+     E  +HILINNA
Sbjct: 88  KNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNA 126

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score = 91.3 bits (225), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 8/99 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           ++ GK V+ITG NTGIGK TA+ L   GA+V +ACRDV K E+ ASEIR         D 
Sbjct: 36  QIPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIR--------ADT 87

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           K  +VL++KLDL+  KSIR  A+     E  +HILINNA
Sbjct: 88  KNSQVLVRKLDLSDTKSIRAFAERFLAEEKKLHILINNA 126

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1

 Score = 91.3 bits (225), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 66/100 (66%), Gaps = 2/100 (2%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVA--TSED 69
           + GKTV+ITG N+G+G+ TA  L  +GA+VIM CRD  +AE  A ++R+    A     D
Sbjct: 42  MHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPD 101

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              G++++K+LDLAS +S+R   Q++ Q E  + +LINNA
Sbjct: 102 GTDGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNA 141

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. No steroid dehydrogenase activity detected.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 8/99 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           +L GK V+ITG NTGIGK TA+ L   GA+V +ACRDV K E+ ASEI+         D 
Sbjct: 36  QLFGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQ--------ADT 87

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           K  +VL++KLDL+  KSIR  A+     E  +HILINNA
Sbjct: 88  KNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNA 126

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score = 88.2 bits (217), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 70/109 (64%), Gaps = 8/109 (7%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           +S+    S  +L GK V++TG NTGIGK TA+ L   GA+V +ACRDVEK E  A EI+ 
Sbjct: 28  LSSGVCTSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQ- 86

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                T+ ++   +VL++KLDL+  KSIR  A+     E ++H+LINNA
Sbjct: 87  ----TTTGNQ---QVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNA 128

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q9QYF1|RDH11_MOUSE Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=2 SV=2

 Score = 86.7 bits (213), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 8/109 (7%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           +S+    S  +L GK  I+TG NTGIGK TA+ L   GA+V +ACRDV+K E  A EI  
Sbjct: 25  LSSGVCTSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREI-- 82

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +  T       +V ++KLDLA  KSIR  A+D    E ++H+LINNA
Sbjct: 83  --QAVTGNS----QVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNA 125

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent all-trans-retinal reductase. Also involved in the metabolism of short-chain aldehydes.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/102 (49%), Positives = 63/102 (61%), Gaps = 8/102 (7%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
           S + + GKTVI+TG NTGIGK TA  L   G  VI+ACRD+EK E  A +IR        
Sbjct: 32  SKATIPGKTVIVTGANTGIGKQTALELAKRGGNVILACRDMEKCEVAAKDIR-------G 84

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           E   P  V  ++LDLAS KSIR+ A+ + + E  V IL+NNA
Sbjct: 85  ETLNP-RVRAERLDLASLKSIREFARKVIKEEERVDILVNNA 125

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 61/107 (57%), Gaps = 18/107 (16%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
           S + + GKTVI+TG NTGIGK TA  L   G  +I+ACRD+EK E  A +IR        
Sbjct: 32  SKATIPGKTVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAKDIR-------- 83

Query: 68  EDKKPGEVL-----IKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                GE L      + LDLAS KSIR+ A  I + E  V ILINNA
Sbjct: 84  -----GETLNHHVNARHLDLASLKSIREFAAKIIEEEERVDILINNA 125

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q17QU7|DHR13_BOVIN Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 8/98 (8%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L G+T ++TG N+GIGK+TA  L   GA+V++ACR  E+ E  A ++R        ++  
Sbjct: 34  LRGRTAVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLR--------QESG 85

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             EV+   LDLAS  S+R  A     +E  + ILI+NA
Sbjct: 86  NNEVIFMALDLASLASVRAFATAFLSSEPRLDILIHNA 123

Putative oxidoreductase.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
350537621	317	uncharacterized protein LOC100166388 [Ac	0.900	0.630	0.370	6e-35
193582345	317	PREDICTED: retinol dehydrogenase 11-like	0.891	0.624	0.373	1e-32
358001101	248	retinol dehydrogenase 11 isoform 2 precu	0.837	0.75	0.407	6e-30
426377251	248	PREDICTED: retinol dehydrogenase 11 isof	0.837	0.75	0.407	7e-30
410048431	222	PREDICTED: retinol dehydrogenase 11 isof	0.837	0.837	0.407	7e-30
332228941	248	PREDICTED: retinol dehydrogenase 11 isof	0.837	0.75	0.407	7e-30
426233568	259	PREDICTED: retinol dehydrogenase 11 isof	0.828	0.710	0.403	2e-28
449681102	242	PREDICTED: retinol dehydrogenase 12-like	0.824	0.756	0.385	3e-28
410962489	246	PREDICTED: retinol dehydrogenase 11 isof	0.837	0.756	0.393	1e-27
189233927	304	PREDICTED: similar to Retinol dehydrogen	0.882	0.644	0.352	1e-27

>gi|350537621|ref|NP_001233110.1| uncharacterized protein LOC100166388 [Acyrthosiphon pisum] gi|239791407|dbj|BAH72175.1| ACYPI007265 [Acyrthosiphon pisum]

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/278 (37%), Positives = 144/278 (51%), Gaps = 78/278 (28%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           M + K  S++RLDGK  I+TG NTGIGKVTA+  Y +GAKVI+ACRDV KAE   SEI  
Sbjct: 1   MFSGKCTSSARLDGKIAIVTGANTGIGKVTAKQFYALGAKVILACRDVGKAEKAVSEI-- 58

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA--VYCILSN-- 116
              +A  +    G++++++LDLASF S++ CA++I Q E  +H+L+NNA  + C      
Sbjct: 59  ---MAEVKSDGLGQLIVEELDLASFASVKRCAKNILQKEKQIHLLVNNAGVMACPKGKTQ 115

Query: 117 -------------NILFYSILFYAI----PGKNVNV--------------------YAVH 139
                        + LF S+L   I    P + +NV                    Y+  
Sbjct: 116 DGFETQFGVNHLGHFLFTSLLLPRIRNSDPARIINVSSRAHTRGSINFEDINFDRNYSAM 175

Query: 140 PG---------IVKTELGRYMDDT------YFPG--ARTLGR---------------VLM 167
                      +   EL R ++ T        PG  +  LGR               V++
Sbjct: 176 AAYSQSKLANVLFSKELTRRLEGTGVHVYSLHPGIVSTELGRTIDEVYFPGLWLLGRVIL 235

Query: 168 WWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAK 205
           + W+KTPEQGAQTTLHC++DE A +ETGLYYSD KV++
Sbjct: 236 FPWVKTPEQGAQTTLHCSIDEKAGEETGLYYSDCKVSE 273

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193582345|ref|XP_001948920.1| PREDICTED: retinol dehydrogenase 11-like [Acyrthosiphon pisum]

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/276 (37%), Positives = 141/276 (51%), Gaps = 78/276 (28%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           M ++K  S +RLDGKT I+TG NTGIGKVTA+  Y +GA+VI+ACRDV+KAE    EI  
Sbjct: 1   MFSNKCTSKARLDGKTAIVTGSNTGIGKVTAKEFYRLGARVILACRDVKKAEQAVEEI-- 58

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA--VYCILSN-- 116
              VA  +    G+++I+ LDLASF SI+ CA+ I Q E ++H+L+NNA  + C      
Sbjct: 59  ---VAEVQGDGVGQLVIEALDLASFASIKLCAKSILQKEKHIHLLVNNAGVMTCPKGKTQ 115

Query: 117 -------------NILFYSILFYAI----PGKNVNVYAV------------------HPG 141
                        + LF  +L   I    P + VNV ++                   P 
Sbjct: 116 DGFETQFGINHLGHFLFTMLLLPRIRSSTPARIVNVASLAHVFGSINFKDINHDASYSPA 175

Query: 142 IVKT-----------ELGRYMDDT------YFPG------ARTLGRVL---MWW------ 169
           +  +           EL R ++ T        PG       RTL +V    MW+      
Sbjct: 176 MAYSQSKLANVLFSKELSRKLEGTGVHVYSLHPGIVRTELTRTLDKVYFPGMWFLGRIFL 235

Query: 170 --WMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKV 203
             W+K P+QGAQTTL+C++DE +  ETGLYYSD KV
Sbjct: 236 YPWVKNPKQGAQTTLYCSIDEKSGMETGLYYSDCKV 271

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|358001101|ref|NP_001239579.1| retinol dehydrogenase 11 isoform 2 precursor [Homo sapiens] gi|194373551|dbj|BAG56871.1| unnamed protein product [Homo sapiens]

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 25/211 (11%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           +S+    S  +L GK V++TG NTGIGK TA+ L   GA+V +ACRDVEK E  A EI+ 
Sbjct: 28  LSSGVCTSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQ- 86

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA--VYCILSNNI 118
                T+ ++   +VL++KLDL+  KSIR  A+     E ++H+LINNA  + C  S   
Sbjct: 87  ----TTTGNQ---QVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTA 139

Query: 119 LFYSI-LFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWW----WMKT 173
             + + +     G  V  Y+VHPG V++EL R+     +          MWW    ++KT
Sbjct: 140 DGFEMHIGVNHLGSGVTTYSVHPGTVQSELVRHSSFMRW----------MWWLFSFFIKT 189

Query: 174 PEQGAQTTLHCALDEGAAKETGLYYSDYKVA 204
           P+QGAQT+LHCAL EG    +G ++SD  VA
Sbjct: 190 PQQGAQTSLHCALTEGLEILSGNHFSDCHVA 220

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426377251|ref|XP_004055383.1| PREDICTED: retinol dehydrogenase 11 isoform 2 [Gorilla gorilla gorilla]

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 25/211 (11%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           +S+    S  +L GK V++TG NTGIGK TA+ L   GA+V +ACRDVEK E  A EI+ 
Sbjct: 28  LSSGVCTSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQ- 86

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA--VYCILSNNI 118
                T+ ++   +VL++KLDL+  KSIR  A+     E ++H+LINNA  + C  S   
Sbjct: 87  ----TTTGNQ---QVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTA 139

Query: 119 LFYSI-LFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWW----WMKT 173
             + + +     G  V  Y+VHPG V++EL R+     +          MWW    ++KT
Sbjct: 140 DGFEMHIGVNHLGSGVTTYSVHPGTVQSELVRHSSFMRW----------MWWLFSFFIKT 189

Query: 174 PEQGAQTTLHCALDEGAAKETGLYYSDYKVA 204
           P+QGAQT+LHCAL EG    +G ++SD  VA
Sbjct: 190 PQQGAQTSLHCALTEGLEILSGNHFSDCHVA 220

Source: Gorilla gorilla gorilla

Species: Gorilla gorilla

Genus: Gorilla

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410048431|ref|XP_003952570.1| PREDICTED: retinol dehydrogenase 11 isoform 2 [Pan troglodytes]

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 25/211 (11%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           +S+    S  +L GK V++TG NTGIGK TA+ L   GA+V +ACRDVEK E  A EI+ 
Sbjct: 2   LSSGVCTSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQ- 60

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA--VYCILSNNI 118
                T+ ++   +VL++KLDL+  KSIR  A+     E ++H+LINNA  + C  S   
Sbjct: 61  ----TTTGNQ---QVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTA 113

Query: 119 LFYSI-LFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWW----WMKT 173
             + + +     G  V  Y+VHPG V++EL R+     +          MWW    ++KT
Sbjct: 114 DGFEMHIGVNHLGSGVTTYSVHPGTVQSELVRHSSFMRW----------MWWLFSFFIKT 163

Query: 174 PEQGAQTTLHCALDEGAAKETGLYYSDYKVA 204
           P+QGAQT+LHCAL EG    +G ++SD  VA
Sbjct: 164 PQQGAQTSLHCALTEGLEILSGNHFSDCHVA 194

Source: Pan troglodytes

Species: Pan troglodytes

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332228941|ref|XP_003263646.1| PREDICTED: retinol dehydrogenase 11 isoform 3 [Nomascus leucogenys]

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 123/211 (58%), Gaps = 25/211 (11%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           +S+    S ++L GK V++TG NTGIGK TA+ L   GA+V +ACRDVEK E  A EI+ 
Sbjct: 28  LSSGVCTSTAQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQ- 86

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA--VYCILSNNI 118
                T+ ++   +VL++KLDL+  KSIR  A+     E ++HILINNA  + C  S   
Sbjct: 87  ----TTTGNQ---QVLVRKLDLSDTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTA 139

Query: 119 LFYSI-LFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWW----WMKT 173
             + + +     G  V  Y+VHPG V++EL R+     +          +WW    ++KT
Sbjct: 140 DGFEMHIGVNHLGSGVTTYSVHPGTVQSELVRHSSFMRW----------IWWLFSFFIKT 189

Query: 174 PEQGAQTTLHCALDEGAAKETGLYYSDYKVA 204
           P+QGAQT+LHCAL EG    +G ++SD  VA
Sbjct: 190 PQQGAQTSLHCALTEGLEILSGNHFSDCHVA 220

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426233568|ref|XP_004010788.1| PREDICTED: retinol dehydrogenase 11 isoform 2 [Ovis aries]

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 120/213 (56%), Gaps = 29/213 (13%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           +S+    S  +L GK  ++TG NTGIGK TA+ L   GA+V +ACRDV+K E  A EI  
Sbjct: 26  LSSGVCTSTIQLPGKVAVVTGANTGIGKETAKELARRGARVYLACRDVQKGELVAREI-- 83

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA--VYCILSNNI 118
             ++ T       +VL++KLDLA  KSIR  A+   + E ++HILINNA  + C  S   
Sbjct: 84  --QMMTGNQ----QVLVRKLDLADTKSIRAFAKRFLEEEKHLHILINNAGVMMCPYSKTA 137

Query: 119 LFYSI-LFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMW-WW-----M 171
             + + +     G  V VY+VHPG V +EL R+              ++ W WW     +
Sbjct: 138 DGFEMHMGVNHLGSGVTVYSVHPGTVNSELVRH------------SALMRWIWWIFSFFI 185

Query: 172 KTPEQGAQTTLHCALDEGAAKETGLYYSDYKVA 204
           KTP+QGAQT+L+CAL EG    +G ++SD  VA
Sbjct: 186 KTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVA 218

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449681102|ref|XP_002157399.2| PREDICTED: retinol dehydrogenase 12-like [Hydra magnipapillata]

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 117/205 (57%), Gaps = 22/205 (10%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
           + +R+DGKTVIITG NTGIGK TA  L   GA +++ACRD++K  T   +I+        
Sbjct: 30  TTTRMDGKTVIITGANTGIGKETALELAKRGAIIVLACRDLKKGNTAVVDIK-------- 81

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA-VYCILSNNILFYSI-LF 125
              K   V +K+LDL+S +SIR  A    +  +++H+LINNA V+C        + + L 
Sbjct: 82  NQTKNENVFLKELDLSSMQSIRLFASSFLKEFSSLHVLINNAGVFCPQQKTKDGFEMHLG 141

Query: 126 YAIPGKNVNVYAVHPGIVKTELGR--YMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH 183
               G N+ VYAVHPG+V T + R  +  + + P            + KTP+QGAQT L+
Sbjct: 142 VNHLGSNITVYAVHPGLVLTNILRHDFFTNHFIPRC----------FFKTPKQGAQTLLY 191

Query: 184 CALDEGAAKETGLYYSDYKVAKSRN 208
           CA  +G    +G Y+++ ++ KSRN
Sbjct: 192 CATQKGLETFSGSYFAECQITKSRN 216

Source: Hydra magnipapillata

Species: Hydra magnipapillata

Genus: Hydra

Family: Hydridae

Order: Hydroida

Class: Hydrozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|410962489|ref|XP_003987802.1| PREDICTED: retinol dehydrogenase 11 isoform 2 [Felis catus]

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 117/211 (55%), Gaps = 25/211 (11%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           +S+    S  +L GK  ++TG NTGIGK TA+ L   GA+V +ACRD++K E  A EI  
Sbjct: 26  LSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAQRGARVYLACRDIQKGELVAREI-- 83

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA--VYCILSNNI 118
             +  T       +VL+++LDLA  KSIR  A+D    E ++HILINNA  + C  S   
Sbjct: 84  --QTMTGNQ----QVLVRELDLADTKSIRAFAKDFLAEEKHLHILINNAGVMMCPYSKTA 137

Query: 119 LFYSI-LFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWW----WMKT 173
             + + +     G  V  Y+VHPG V +EL R+     +          MWW    ++KT
Sbjct: 138 DGFEMHMGVNHLGSGVTTYSVHPGTVNSELVRHSPFMKW----------MWWLFSFFIKT 187

Query: 174 PEQGAQTTLHCALDEGAAKETGLYYSDYKVA 204
           P+QGAQT+L+CA+ EG     G ++SD  VA
Sbjct: 188 PKQGAQTSLYCAITEGLEILNGHHFSDCSVA 218

Source: Felis catus

Species: Felis catus

Genus: Felis

Family: Felidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|189233927|ref|XP_973517.2| PREDICTED: similar to Retinol dehydrogenase 13 [Tribolium castaneum]

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 134/267 (50%), Gaps = 71/267 (26%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           + + K VS +RLDGKT ++TG NTGIGK T +  +  GA+VI+ACR+++KA     +I+K
Sbjct: 3   LFSGKCVSKARLDGKTAVVTGANTGIGKETVKDFFQRGARVIVACRNLDKANQAVEDIKK 62

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA--VYCILSNNI 118
            F    S+ +  GE+++ +LDL S KS+R+CA+ I +TE  + +LINNA  + C      
Sbjct: 63  EF----SDGENLGELMVTQLDLTSLKSVRNCAKVILETEKRIDLLINNAGVMMCPEGRTE 118

Query: 119 LFYSILF-------------------YAIPGKNVNVYAV-HP-GIVKTE----------- 146
             + + F                    + P + VNV +V H  G +  E           
Sbjct: 119 DGFEMQFGTNHLGHFLLTLLLLPKICQSTPARIVNVSSVAHKYGCIDFEDLNWQKRKYSS 178

Query: 147 LGRYMDD---------------------TYFPGA-RT-LGR----VLMWWW------MKT 173
           LG Y                        +  PG  RT LGR     L W W      +KT
Sbjct: 179 LGAYQQSKLANILFTKELVRRLAGVNVYSLHPGVIRTELGRHLDYRLRWLWRIFSFLIKT 238

Query: 174 PEQGAQTTLHCALDEGAAKETGLYYSD 200
           P+QGAQTT++CA+DE  A ETGLYY+D
Sbjct: 239 PDQGAQTTIYCAVDEKCANETGLYYAD 265

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
ZFIN|ZDB-GENE-030131-4716	331	wu:fd55e03 "wu:fd55e03" [Danio	0.423	0.283	0.509	1.9e-35
ZFIN|ZDB-GENE-040801-48	291	rdh12l "retinol dehydrogenase	0.423	0.323	0.539	1.3e-34
ZFIN|ZDB-GENE-060825-39	336	zgc:153441 "zgc:153441" [Danio	0.409	0.270	0.494	2e-34
ZFIN|ZDB-GENE-070912-611	292	si:dkey-94e7.2 "si:dkey-94e7.2	0.423	0.321	0.5	1.1e-33
ZFIN|ZDB-GENE-100922-3	337	si:dkey-23o4.6 "si:dkey-23o4.6	0.423	0.278	0.490	1.5e-33
UNIPROTKB|Q17QW3	336	RDH14 "Retinol dehydrogenase 1	0.432	0.285	0.465	1.3e-32
UNIPROTKB|Q8TC12	318	RDH11 "Retinol dehydrogenase 1	0.454	0.317	0.458	1.3e-32
RGD|1565196	334	Rdh14 "retinol dehydrogenase 1	0.441	0.293	0.44	1.4e-32
UNIPROTKB|F1SA23	316	RDH12 "Uncharacterized protein	0.409	0.287	0.525	4.3e-32
ZFIN|ZDB-GENE-050522-387	298	zgc:112332 "zgc:112332" [Danio	0.423	0.315	0.529	6.9e-32

ZFIN|ZDB-GENE-030131-4716 wu:fd55e03 "wu:fd55e03" [Danio rerio (taxid:7955)]

 Score = 228 (85.3 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
 Identities = 52/102 (50%), Positives = 70/102 (68%)

Query:     8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
             S +RL+GKTV+ITG NTGIGK TA  +   GA+VI+ACRD+ +A   A EIRK    + +
Sbjct:    47 SKARLNGKTVLITGGNTGIGKETAVDMAKRGARVILACRDMSRAHKAAEEIRKR---SGN 103

Query:    68 EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             E+     V +K LDLAS +S+RD  +D+ Q+E  + ILINNA
Sbjct:   104 EN-----VTVKMLDLASLQSVRDLVKDVQQSEQRLDILINNA 140

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-040801-48 rdh12l "retinol dehydrogenase 12, like" [Danio rerio (taxid:7955)]

 Score = 236 (88.1 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
 Identities = 55/102 (53%), Positives = 70/102 (68%)

Query:     8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
             SA+RLDGKTV+ITG NTGIGK TA  L   GA++IMACRD+EKAE    E++   + + +
Sbjct:     7 SAARLDGKTVLITGANTGIGKETAIDLAKRGARIIMACRDMEKAEAALKEVK---DSSGN 63

Query:    68 EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +D     V I  LDL+  KSIR  A+ IN+ E  V+ILINNA
Sbjct:    64 QD-----VFISSLDLSDSKSIRGFAEKINKEEKQVNILINNA 100

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

ZFIN|ZDB-GENE-060825-39 zgc:153441 "zgc:153441" [Danio rerio (taxid:7955)]

 Score = 220 (82.5 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
 Identities = 49/99 (49%), Positives = 66/99 (66%)

Query:    11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
             RLDGKTV+ITG NTGIGK TA+ +   GA+V+MACRD+ KAE  A+EIR+    +T    
Sbjct:    49 RLDGKTVVITGANTGIGKETARDMARRGARVVMACRDLSKAEKAAAEIRR----STGN-- 102

Query:    71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                +++++ L+LAS  S+R  A     TE  + ILINNA
Sbjct:   103 --ADIVVRHLNLASLHSVRQFAHQYTATEDRLDILINNA 139

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

ZFIN|ZDB-GENE-070912-611 si:dkey-94e7.2 "si:dkey-94e7.2" [Danio rerio (taxid:7955)]

 Score = 225 (84.3 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 51/102 (50%), Positives = 67/102 (65%)

Query:     8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
             S +RLD KT+IITG NTGIGK T + L   G ++IMACRDVEKAE    EI         
Sbjct:    10 SNARLDDKTIIITGANTGIGKETTKDLAKRGPRIIMACRDVEKAERAQREIM-------- 61

Query:    68 EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             E+     ++I+KLDL+  +SIR+ A+ IN  E ++H+LINNA
Sbjct:    62 EESGNQNIVIRKLDLSDTRSIREFAEVINSEERSLHLLINNA 103

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

ZFIN|ZDB-GENE-100922-3 si:dkey-23o4.6 "si:dkey-23o4.6" [Danio rerio (taxid:7955)]

 Score = 213 (80.0 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
 Identities = 50/102 (49%), Positives = 68/102 (66%)

Query:     8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
             S +RLDGKTV+ITG NTGIG+ TA+ +   GA+V+MACRD+ +AE  A  IR+     T 
Sbjct:    46 SHARLDGKTVVITGANTGIGRETAKDMAYRGARVVMACRDLIRAEDAAEYIRR----CTG 101

Query:    68 EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                  G V+I+ L+LAS  S+R+ A++   TE  + ILINNA
Sbjct:   102 N----GNVVIRHLNLASLYSVREFAKEFIATEERLDILINNA 139

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|Q17QW3 RDH14 "Retinol dehydrogenase 14 (All-trans/9-cis/11-cis)" [Bos taurus (taxid:9913)]

 Score = 224 (83.9 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 47/101 (46%), Positives = 66/101 (65%)

Query:    14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKP- 72
             GKTV+ITG N+G+G+ TA  L  +GA+VIM CRD E+AE  A ++R+    A   D  P 
Sbjct:    43 GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRERAEEAAGQLRREVCPAGGPDSGPN 102

Query:    73 ----GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                 GE+++K+LDLAS  S+R   Q++ Q E  + +LINNA
Sbjct:   103 SGGAGELVVKELDLASLSSVRSFCQEMLQEEPRLDVLINNA 143

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8TC12 RDH11 "Retinol dehydrogenase 11" [Homo sapiens (taxid:9606)]

 Score = 215 (80.7 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 50/109 (45%), Positives = 70/109 (64%)

Query:     1 MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
             +S+    S  +L GK V++TG NTGIGK TA+ L   GA+V +ACRDVEK E  A EI+ 
Sbjct:    28 LSSGVCTSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQ- 86

Query:    61 HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                  T+ ++   +VL++KLDL+  KSIR  A+     E ++H+LINNA
Sbjct:    87 ----TTTGNQ---QVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNA 128

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IEA

GO:0016062 "adaptation of rhodopsin mediated signaling" evidence=IEA

GO:0005622 "intracellular" evidence=ISS

GO:0004745 "retinol dehydrogenase activity" evidence=ISS

GO:0042572 "retinol metabolic process" evidence=ISS

GO:0042574 "retinal metabolic process" evidence=IDA

GO:0052650 "NADP-retinol dehydrogenase activity" evidence=IDA

GO:0001523 "retinoid metabolic process" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0008202 "steroid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

RGD|1565196 Rdh14 "retinol dehydrogenase 14 (all-trans/9-cis/11-cis)" [Rattus norvegicus (taxid:10116)]

 Score = 217 (81.4 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
 Identities = 44/100 (44%), Positives = 66/100 (66%)

Query:    12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVA--TSED 69
             + GKTV+ITG N+G+G+ TA  L  +GA+VIM CRD  +AE  A ++R+    A     D
Sbjct:    42 MHGKTVLITGANSGLGRATAGELLRLGARVIMGCRDRARAEEAAGQLRQELGQAGGLGPD 101

Query:    70 KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                G++++K+LDLAS +S+R   Q++ Q E  + +LINNA
Sbjct:   102 ATDGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNA 141

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1SA23 RDH12 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 219 (82.2 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
 Identities = 52/99 (52%), Positives = 64/99 (64%)

Query:    11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
             +L GK V+ITG NTGIGK TA+ L   GA+V +ACRDV K E+ ASEIR         D 
Sbjct:    36 QLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRA--------DT 87

Query:    71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             K  +VL++KLDL+  KSIR  A+     E  +HILINNA
Sbjct:    88 KNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNA 126

GO:0042572 "retinol metabolic process" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0004745 "retinol dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-050522-387 zgc:112332 "zgc:112332" [Danio rerio (taxid:7955)]

 Score = 224 (83.9 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
 Identities = 54/102 (52%), Positives = 70/102 (68%)

Query:     8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
             S+ RLD KTVIITG NTGIGK TA+ L   GA+V+MACRD+EKAE    E+  +     S
Sbjct:    14 SSVRLDEKTVIITGANTGIGKETARDLARRGARVVMACRDLEKAEAARRELMDN-----S 68

Query:    68 EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              ++    +++KKLDLA  KSI+  A+ IN+ E  V+ILINNA
Sbjct:    69 GNQN---IVVKKLDLADTKSIKAFAELINKEEKQVNILINNA 107

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8BYK4	RDH12_MOUSE	1, ., 1, ., 1, ., -	0.5151	0.4099	0.2879	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	222
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-31
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-28
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	5e-21
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	1e-18
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-17
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	4e-16
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	3e-15
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	2e-14
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	5e-14
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	9e-14
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-13
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	6e-13
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	8e-13
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-12
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-12
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-12
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	8e-12
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	1e-11
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	1e-11
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	5e-11
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	5e-11
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	8e-11
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	8e-11
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-10
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-10
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	2e-10
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	3e-10
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-10
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-10
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	4e-10
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	9e-10
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-09
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-09
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-09
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-09
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-09
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	4e-09
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-09
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	5e-09
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	5e-09
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	6e-09
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-09
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-08
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-08
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-08
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-08
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	3e-08
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	3e-08
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	4e-08
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	4e-08
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	6e-08
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	6e-08
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	7e-08
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	8e-08
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-07
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-07
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-07
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-07
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-07
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-07
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-07
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	3e-07
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	3e-07
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-07
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-07
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	4e-07
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	6e-07
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-07
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	6e-07
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	7e-07
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	8e-07
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	8e-07
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	8e-07
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-06
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	1e-06
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-06
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-06
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-06
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-06
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-06
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-06
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-06
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-06
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	4e-06
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	4e-06
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-06
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	4e-06
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	6e-06
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	6e-06
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	7e-06
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	7e-06
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	8e-06
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	8e-06
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-06
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-05
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-05
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-05
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	1e-05
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-05
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-05
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-05
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-05
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	1e-05
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-05
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-05
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-05
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-05
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-05
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-05
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-05
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	3e-05
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-05
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	3e-05
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	4e-05
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	5e-05
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	5e-05
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	6e-05
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	6e-05
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	6e-05
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	6e-05
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	7e-05
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	8e-05
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	9e-05
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	1e-04
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	1e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-04
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	1e-04
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	1e-04
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-04
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-04
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-04
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-04
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-04
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-04
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	2e-04
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-04
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	2e-04
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-04
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-04
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-04
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-04
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	3e-04
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	3e-04
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-04
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	4e-04
cd01078	194	cd01078, NAD_bind_H4MPT_DH, NADP binding domain of	4e-04
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	5e-04
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	5e-04
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	7e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	8e-04
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	8e-04
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	0.001
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	0.001
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	0.002
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	0.002
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	0.002
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	0.003
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	0.003
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	0.004
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	0.004

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  115 bits (290), Expect = 2e-31
 Identities = 51/96 (53%), Positives = 62/96 (64%), Gaps = 8/96 (8%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
           GKTVIITG NTGIGK TA+ L   GA+VIMACRD+ K E  A+EIR+        D    
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRR--------DTLNH 52

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           EV+++ LDLAS KSIR  A +    E  + +LINNA
Sbjct: 53  EVIVRHLDLASLKSIRAFAAEFLAEEDRLDVLINNA 88

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  106 bits (268), Expect = 3e-28
 Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 8/96 (8%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
           GK V+ITG N+GIGK TA+ L   GA VI+ACR+ EK E  A+EI+K             
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKET--------GNA 52

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           +V + +LDL+S  S+R  A++       + ILINNA
Sbjct: 53  KVEVIQLDLSSLASVRQFAEEFLARFPRLDILINNA 88

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 87.9 bits (218), Expect = 5e-21
 Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)

Query: 117 NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQ 176
           N+LF   L   + G  V V A+HPG+V+TELGR+    +     TL   L W ++KTP +
Sbjct: 169 NVLFTRELARRLQGTGVTVNALHPGVVRTELGRHTG-IHHLFLSTLLNPLFWPFVKTPRE 227

Query: 177 GAQTTLHCALDEGAAKETGLYYSDYK 202
           GAQT+++ AL E     +G Y+SD K
Sbjct: 228 GAQTSIYLALAEELEGVSGKYFSDCK 253

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 81.6 bits (202), Expect = 1e-18
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 13  DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKP 72
            G+  ++TG NTG+G  TA  L   GA V++A R+++K +  A+ I              
Sbjct: 15  SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITA--------ATPG 66

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            +V +++LDL S  S+R  A  +      + +LINNA
Sbjct: 67  ADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNA 103

Length = 306

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 78.4 bits (194), Expect = 1e-17
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 130 GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG 189
           G  V V A+HPG+V+TEL R            L ++L  +  K+PEQGAQT L+ A    
Sbjct: 184 GTGVTVNALHPGVVRTELLRRN-----GSFFLLYKLLRPFLKKSPEQGAQTALYAATSPE 238

Query: 190 AAKETGLYYSDYKVAKSR 207
               +G Y+SD K+  S 
Sbjct: 239 LEGVSGKYFSDCKIKMSS 256

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 75.1 bits (185), Expect = 4e-16
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 14/107 (13%)

Query: 3   ASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHF 62
           A + ++   L GKT I+TG  +G+G  T + L   GA VI+  R  + A    + I    
Sbjct: 15  AEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID--- 71

Query: 63  EVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                       V +  LDLA  +S+R  A+    +   + ILINNA
Sbjct: 72  -----------GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNA 107

Length = 315

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 72.6 bits (178), Expect = 3e-15
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 8/102 (7%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
           GK +IITG N+GIG  TA++    GA VI+ACR++ +A    S I + +  A  E     
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVE----- 55

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILS 115
                 LDLAS +S++  A+      + +H+L+ NA    L 
Sbjct: 56  ---AMTLDLASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALP 94

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 70.1 bits (172), Expect = 2e-14
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK  ++TG + G+G   A+ L   GA+VI+  R+  K E   + IR     A      
Sbjct: 12  LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAK----- 66

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              + ++ LDL+S  S+    + +      +H+LINNA
Sbjct: 67  ---LSLRALDLSSLASVAALGEQLRAEGRPIHLLINNA 101

Length = 313

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 68.5 bits (168), Expect = 5e-14
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 9/95 (9%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           KTV+ITG ++GIG+ TA+     GAK+I+  R  E+ +  A E+   F         P +
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKF---------PVK 51

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           VL  +LD++  +SI    +++ +   ++ IL+NNA
Sbjct: 52  VLPLQLDVSDRESIEAALENLPEEFRDIDILVNNA 86

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 68.3 bits (167), Expect = 9e-14
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 12/108 (11%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
            TV+ITG ++G+G   A+ L   G   V+MACRD  KAE  A E+               
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEV----------GMPKD 51

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA-VYCILSNNILF 120
              +   DLAS  S+R    +  +T   +  L+ NA VY   +    F
Sbjct: 52  SYSVLHCDLASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRF 99

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 66.0 bits (162), Expect = 3e-13
 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 10/100 (10%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
             L GKT ++TG + GIG+  A  L   GAKV++   + E AE  A+E+R          
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG------- 53

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              GE  +   D++   ++R   +   +    + IL+NNA
Sbjct: 54  ---GEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNA 90

Length = 246

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 65.7 bits (161), Expect = 6e-13
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 9/98 (9%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           + GKT +ITG ++GIG   A+ L   G  +I+  R  +K E  A E+     V       
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGV------- 56

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             EV +   DL+  +++     ++ +    + +L+NNA
Sbjct: 57  --EVEVIPADLSDPEALERLEDELKERGGPIDVLVNNA 92

Length = 265

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 65.8 bits (161), Expect = 8e-13
 Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 11/98 (11%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
            TVIITG ++G+G   A+ L   G  VIMACR+++KAE  A E+             P  
Sbjct: 7   GTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL----------GIPPDS 56

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILI-NNAVY 111
             I  +DL    S+R    D       +  L+ N AVY
Sbjct: 57  YTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVY 94

Length = 322

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 64.5 bits (158), Expect = 1e-12
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K  ++TG + GIG+  A  L   GAKV +  R  E A  T  EI+             G 
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIK----------ALGGN 50

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               + D++  +++    + +      V IL+NNA
Sbjct: 51  AAALEADVSDREAVEALVEKVEAEFGPVDILVNNA 85

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 63.8 bits (156), Expect = 2e-12
 Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 11/93 (11%)

Query: 17  VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVL 76
            ++TG ++GIG+  A+ L   GAKV++A R+ E     A+                G  +
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEA-----------LGGNAV 49

Query: 77  IKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             + D++  + +    ++  +    + IL+NNA
Sbjct: 50  AVQADVSDEEDVEALVEEALEEFGRLDILVNNA 82

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 64.6 bits (158), Expect = 3e-12
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GK V+ITG ++GIG+ TA  +   GA V +  R+ E  +   +EIR           
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIR----------A 417

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           K G       DL    ++    +DI     +V  L+NNA
Sbjct: 418 KGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNA 456

Length = 657

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 62.5 bits (152), Expect = 8e-12
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 12/102 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR--DVEKAETTASEIRKHFEVATSE 68
            L GK  ++TG ++GIG+  A+ L   GA+V++A R  + E AE  A+ I         +
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAI---------K 52

Query: 69  DKKPGEVLIKKLDLAS-FKSIRDCAQDINQTEANVHILINNA 109
           +   G       D++   +S+        +    + IL+NNA
Sbjct: 53  EAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNA 94

Length = 251

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 62.2 bits (151), Expect = 1e-11
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 8/96 (8%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
           G++ +ITG N+GIGK  A  +   G  V M CR+  +AE    EI        S ++   
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEI-----ETESGNQN-- 53

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            + +  +D++  K + +  ++  +    +H+LINNA
Sbjct: 54  -IFLHIVDMSDPKQVWEFVEEFKEEGKKLHVLINNA 88

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 61.5 bits (150), Expect = 1e-11
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 12/101 (11%)

Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSE 68
            + L GK  +ITG ++GIG+ TA+ L   GAKV++A R  E+ E  A EI          
Sbjct: 1   MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-------- 52

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               G  L   LD+    ++    + + +    + IL+NNA
Sbjct: 53  ----GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNA 89

Length = 246

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 59.9 bits (146), Expect = 5e-11
 Identities = 56/245 (22%), Positives = 84/245 (34%), Gaps = 79/245 (32%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRK------------- 60
           K  ++TG N GIG    + L   G   VI+  RDVE+ +    ++R              
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 61  ---HFEVATSE-DKKPGEVLIKKLDL------ASFKSIRDCAQDINQTE----ANVH--I 104
                E A    ++K G      LD+       +FK   D      Q       N    +
Sbjct: 61  DDASIEAAADFVEEKYG-----GLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTV 115

Query: 105 LINNAVYCILSN----NILFYS----------------------ILFYAIPGKNVNVYAV 138
            +  A+  +L       I+  S                      IL   +    + V A 
Sbjct: 116 DVTQALLPLLKKSPAGRIVNVSSGLGSLTSAYGVSKAALNALTRILAKELKETGIKVNAC 175

Query: 139 HPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYY 198
            PG VKT++G                       KTPE+GA+T ++ AL     + TG ++
Sbjct: 176 CPGWVKTDMGGGKAP------------------KTPEEGAETPVYLALLPPDGEPTGKFF 217

Query: 199 SDYKV 203
           SD KV
Sbjct: 218 SDKKV 222

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 60.5 bits (147), Expect = 5e-11
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 12/96 (12%)

Query: 18  IITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVL 76
           IITG ++G+G  TA+ L   G   V+MACRD  KAE  A            +D       
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAK------SAGMPKDS----YT 50

Query: 77  IKKLDLASFKSIRDCAQDINQTEANVHILI-NNAVY 111
           +  LDLAS  S+R    +  ++   + +L+ N AVY
Sbjct: 51  VMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVY 86

Length = 308

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 59.5 bits (145), Expect = 8e-11
 Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 9/98 (9%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK   ITG  TGIGK  A+    +GA V +A R  E  E  A EI      AT     
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISS----AT----- 51

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            G     + D+   +++     +  +    + ILINNA
Sbjct: 52  GGRAHPIQCDVRDPEAVEAAVDETLKEFGKIDILINNA 89

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 59.6 bits (145), Expect = 8e-11
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 13/99 (13%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K V+ITGC++GIG   A  L   G +VI   R+ +K E+    +  + EV          
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEV---------- 50

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI 113
               +LD+   +SI+   +++ +    + +L+NNA Y +
Sbjct: 51  ---LELDVTDEESIKAAVKEVIERFGRIDVLVNNAGYGL 86

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 8/99 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL GK  ++TG   GIG   A+     GA V +A  D   AE  A+ I          D 
Sbjct: 4   RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIA--------RDV 55

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               VL    D+    S+        +    + +L+NNA
Sbjct: 56  AGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNA 94

Length = 260

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 25/102 (24%), Positives = 36/102 (35%), Gaps = 10/102 (9%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
            AS L GK  ++TG   G+G   A+ L   GA V        +A   A+ +         
Sbjct: 1   MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALE-------- 52

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                G       DLA   S++            +  L+NNA
Sbjct: 53  --AAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNA 92

Length = 250

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 58.3 bits (141), Expect = 2e-10
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 13/100 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSED 69
           RL+ K  +ITG +TGIG+ +A  L   GA V+    D+ E    T  +I+ +        
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVL--AVDIAEAVSETVDKIKSN-------- 52

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              G+     +D++  + ++D A +I +    V +L NNA
Sbjct: 53  --GGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNA 90

Length = 272

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 58.3 bits (141), Expect = 3e-10
 Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 12/98 (12%)

Query: 16  TVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           TVIITG ++G+G   A+ L   G   VIMACRD  KAE  A  +                
Sbjct: 5   TVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSL----------GMPKDS 54

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILI-NNAVY 111
             I  LDL S  S+R   Q   ++   +  L+ N AVY
Sbjct: 55  YTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVY 92

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.5 bits (140), Expect = 4e-10
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 11/99 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL+GK  I+TG ++GIG+  A+     GA+V++  R+ E AE  A+EI            
Sbjct: 2   RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL----------- 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G  +    D++    +        +   +V IL+NNA
Sbjct: 51  AGGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNA 89

Length = 251

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 4e-10
 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
              +ITG ++GIGK TA      G  + +  R  +  E  A+E+R              +
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELR----------STGVK 56

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                +DL++ ++I     ++ +      +LINNA
Sbjct: 57  AAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNA 91

Length = 241

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 4e-10
 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 11/107 (10%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
            +L GKT +ITG   GIG+  A+     GA +I+      + E  A E+       T+  
Sbjct: 2   GKLTGKTALITGALQGIGEGIARVFARHGANLILLDIS-PEIEKLADELCGRGHRCTA-- 58

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSN 116
                      D+    S+    +   + E  + IL+NNA  C L +
Sbjct: 59  --------VVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGS 97

Length = 263

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 9e-10
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           R D K  I+TG   GIG+  A+ L   GA V++A  + E AE  A +I            
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQI----------VA 52

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G  +  ++D++   S +  A         +  L+NNA
Sbjct: 53  DGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNA 91

Length = 250

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 56.4 bits (137), Expect = 1e-09
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 9/98 (9%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK VIITG ++GIG+  A  L  +GA+++++ R  E+ E   SE              
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSEC-------LELGAP 53

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              V+   LD++  +      ++  +    + ILINNA
Sbjct: 54  SPHVV--PLDMSDLEDAEQVVEEALKLFGGLDILINNA 89

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 55.6 bits (134), Expect = 2e-09
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK  ++TG ++GIG+ TA+ L   GA V +A R V++ E  A E+          + +
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADEL----------EAE 50

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            G+ L+ +LD+   + +    +   +    + IL+NNA
Sbjct: 51  GGKALVLELDVTDEQQVDAAVERTVEALGRLDILVNNA 88

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GK V+ITG + GIG   A+     G  + +  RD +  E  A+++R    V      
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVD----- 58

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               V +  LDL+S ++    A +      ++ IL+NNA
Sbjct: 59  ----VAVHALDLSSPEAREQLAAEA----GDIDILVNNA 89

Length = 259

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.8 bits (133), Expect = 3e-09
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 11/100 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSED 69
           +L GK  I+TG + GIG+  A+ L   GAKV++A   + E A+    EI+          
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIK---------- 51

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           ++ G+ +  K D++S + + +  + I +    + IL+NNA
Sbjct: 52  EEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNA 91

Length = 247

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 54.9 bits (133), Expect = 3e-09
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 16/102 (15%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GK  ++TG  +GIG   A  L   GAKV++A  + E A   A  ++          K
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQ----------K 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEAN---VHILINNA 109
             G+ +   +D+   ++I      I+        V IL+NNA
Sbjct: 51  AGGKAIGVAMDVTDEEAINAG---IDYAVETFGGVDILVNNA 89

Length = 258

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 54.8 bits (132), Expect = 4e-09
 Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 28/109 (25%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHF-------- 62
           RLDG+T +ITG + GIG   A+   G+GA V++  RD +       E+ + F        
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 63  --EVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +V+  ED+               ++I D  +D       +HIL+NNA
Sbjct: 66  AADVSDDEDR---------------RAILDWVED---HWDGLHILVNNA 96

Length = 257

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 54.5 bits (132), Expect = 4e-09
 Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 10/102 (9%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L+G+  ++TG   GIG+  A  L   GA+VI+     + A  TA  +            
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG-------- 54

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC 112
             G+   +++D+    +++       +    + IL+ NA   
Sbjct: 55  --GKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIF 94

Length = 251

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 5e-09
 Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 17/102 (16%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI--RKHFEVATS 67
             L GK  I+TG  T IG   A+ L   GA+V +   D +     A+ +  R  F +AT 
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARF-IAT- 59

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                        D+    +I      +      V IL+N A
Sbjct: 60  -------------DITDDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 5e-09
 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL GK  ++TG  +GIG+  A+     GA+V++A     +A   A EI            
Sbjct: 3   RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPA--------- 53

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                +   LD+    SI        +    + IL NNA
Sbjct: 54  ----AIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNA 88

Length = 257

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 6e-09
 Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 20/103 (19%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
             L GK V ITG   GIG  TA+ L  +GA+V +   D   A+ TA+E+           
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL----------- 49

Query: 70  KKPGEVLIKKLDL---ASFKSIRDCAQDINQTEANVHILINNA 109
              G V+   LD+   ASF +  D  +        + +L+NNA
Sbjct: 50  ---GLVVGGPLDVTDPASFAAFLDAVEA---DLGPIDVLVNNA 86

Length = 273

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 53.7 bits (130), Expect = 9e-09
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 11/100 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-KAETTASEIRKHFEVATSED 69
            L+GK  ++TG + GIG+  A+ L   GA V++     E  AE   +EI           
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIG---------- 51

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              G+ L  + D++  +S+     +       V IL+NNA
Sbjct: 52  ALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNA 91

Length = 248

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 16/99 (16%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
           GK VIITG + GIG+  A  L   GA++++A R+  +  + A E+  H           G
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH----------GG 50

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEAN---VHILINNA 109
           E L+   D++  +    C + I    A    + IL+NNA
Sbjct: 51  EALVVPTDVSDAE---ACERLIEAAVARFGGIDILVNNA 86

Length = 263

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 14/98 (14%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L G TV+ITG  +GIG   A+     G  VI+  R  E+      E+             
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKEL------------- 49

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +    LD+   +S+   A+ +     N+ ILINNA
Sbjct: 50  -PNIHTIVLDVGDAESVEALAEALLSEYPNLDILINNA 86

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 11/94 (11%)

Query: 17  VIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEV 75
            ++TG + GIG+  A  L   GAKVI+  R   E AE    E++ +            + 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY----------GVKA 50

Query: 76  LIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           L    D++  + ++   ++I +    + IL+NNA
Sbjct: 51  LGVVCDVSDREDVKAVVEEIEEELGPIDILVNNA 84

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 12/99 (12%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L  K V++TG + GIG+  A+ L   GA++++  R+ EK E  A+ +            
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-----------P 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            PG       DL S            +    +++LINNA
Sbjct: 51  YPGRHRWVVADLTSEAGREAVLARAREMGG-INVLINNA 88

Length = 263

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 10/96 (10%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
           GKT ++TG  +GIG   A+ L   GA V++     E AE  A                 G
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDA----------GG 50

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            V+    D+     I D           + IL+NNA
Sbjct: 51  SVIYLPADVTKEDEIADMIAAAAAEFGGLDILVNNA 86

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GK +++TG ++GIG+  A+     GA V+   R  +  +  A  I           +
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRIT----------R 86

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+ +    DL+   ++     D+ +    V ILINNA
Sbjct: 87  AGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNA 125

Length = 293

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 52.0 bits (125), Expect = 4e-08
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 13/101 (12%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK  IITG ++GIG  TA     +GA++ +  RD E+ E T         +     +K
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSC-----LQAGVSEK 55

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVH---ILINNA 109
              +L+   DL   +        I+ T A      IL+NNA
Sbjct: 56  K--ILLVVADLTEEEGQDRI---ISTTLAKFGRLDILVNNA 91

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 4e-08
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 10/96 (10%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
            K VIITG ++G+GK  A+     GA V++  R  EK E    EI +           PG
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF----------PG 50

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           +VL  ++D+ + + ++   + I++    +  LINNA
Sbjct: 51  QVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 3   ASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHF 62
           A          GK V++TG  +GIG+ TA      GA+V+ +  D   AE TA  IR   
Sbjct: 304 ARVGRPRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG 363

Query: 63  EVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            VA +           ++D++   ++   A+ +        I++NNA
Sbjct: 364 AVAHAY----------RVDVSDADAMEAFAEWVRAEHGVPDIVVNNA 400

Length = 582

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 51.3 bits (123), Expect = 6e-08
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 11/98 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           + GK V++TG + GIG++ AQ     GA+VI++ R  E     A E+             
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL-----------SA 52

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            GE +    DL+S + I      + +    + +L+NNA
Sbjct: 53  YGECIAIPADLSSEEGIEALVARVAERSDRLDVLVNNA 90

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 51.1 bits (123), Expect = 7e-08
 Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 10/96 (10%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
           GK  ++T  ++GIG   A+ L   GA+V +  R+ E  E  ASE+R              
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELR----------AGGA 50

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            VL    DL   + I    +        V IL+NNA
Sbjct: 51  GVLAVVADLTDPEDIDRLVEKAGDAFGRVDILVNNA 86

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 50.8 bits (122), Expect = 8e-08
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 14/116 (12%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
            K ++ITG    IGK   + L   GA++I+A  +    E    E+   ++          
Sbjct: 2   DKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKN--------- 52

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIP 129
            V+  +LD+ S +SI++  +   +    + ILINNA       +   +   F   P
Sbjct: 53  RVIALELDITSKESIKELIESYLEKFGRIDILINNAYP-----SPKVWGSRFEEFP 103

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 11/98 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK  +ITG + GIG   A+ L   G KV +  RD ++ E  A+E+             
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---------- 53

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            G VL    D+     ++     I      + +LI NA
Sbjct: 54  -GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANA 90

Length = 237

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 9/103 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GK  I+TG + GIG   A+ L   GA V +      +AE  A E+ K + V T    
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTK--- 61

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI 113
                   K D++S +S+    + I +    + ILI NA   +
Sbjct: 62  ------AYKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITV 98

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 8/98 (8%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L  +   +TG   GIG+ TA+ L   GA V++A  ++E AE  A+EI   F         
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA------- 464

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            G  +  K+D+   ++++    D+      V I++NNA
Sbjct: 465 -GRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNA 501

Length = 676

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 10/102 (9%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
               +  + V+ITG + G+G+ TA+     GAKV++  R  E  E  A+EIR        
Sbjct: 2   MLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG----- 56

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                GE L    D+A  ++++  A    +    +   +NNA
Sbjct: 57  -----GEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNA 93

Length = 334

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 22/99 (22%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           + GK V++TG N GIG+   + L   GA KV  A RD E              V     +
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES-------------VTDLGPR 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               V+  +LD+    S+   A+      ++V IL+NNA
Sbjct: 51  ----VVPLQLDVTDPASVAAAAEAA----SDVTILVNNA 81

Length = 238

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL G+  I+TG  +GIG+ TA+     GA+V++A RD E AE  A+ I            
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAG--------- 52

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G    ++ D+ S +++      +      + +L+NNA
Sbjct: 53  --GRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNA 89

Length = 252

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L  K  +ITG    +G   A+ L   GAKV    R+ EK +  A EI             
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEI----------TAL 52

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            G  +    D+    S+    ++I      V ILIN A
Sbjct: 53  GGRAIALAADVLDRASLERAREEIVAQFGTVDILINGA 90

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 25/125 (20%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR-KHFEVATSED 69
            L+GKT ++TG   GIG    + L G+GA+V    R+ ++ +   +E R K F+V  S  
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSV- 61

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANV-----HILINNAVYCILSNNILF---- 120
                      D++S    R   Q++  T A+      +IL+NNA   I      +    
Sbjct: 62  ----------CDVSS----RSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEED 107

Query: 121 YSILF 125
           YS++ 
Sbjct: 108 YSLIM 112

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 27/151 (17%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 15  KTVIITGCNTGIG-----KVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           K V++TG N+G+G     ++ A+        +I+ACR++++AE     +         + 
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASH----PDA 57

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQ-------TEANVHILINNAVYCILSNNILFYS 122
           +   + ++  +DL++  S+   A+++ +          N  I+ N  +  I +   +  +
Sbjct: 58  RVVFDYVL--VDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTN 115

Query: 123 ILFYAIPGKNVNVYAVHPGIVKTELGRYMDD 153
            LF      N        G++        D 
Sbjct: 116 PLFAV---TNPTYKIQAEGLLSQGDKATEDG 143

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 12/99 (12%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L+GK  ++TG ++G+G   AQ L   GAKV++A R VE+ +    E+R   E        
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLK----ELRAEIEAEG----- 57

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEAN-VHILINNA 109
            G   +  LD+  ++SI+  A    +TEA  + IL+NN+
Sbjct: 58  -GAAHVVSLDVTDYQSIK-AAVAHAETEAGTIDILVNNS 94

Length = 258

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 8/98 (8%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L+G+  ++TG ++GIG  T + L   GA V +  RD E+  +  + +R+ F         
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF--------P 57

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +L  + D+     +   A  +      V +L+NNA
Sbjct: 58  GARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNA 95

Length = 265

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 10/93 (10%)

Query: 17  VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVL 76
            I+TG   GIGK  A TL   GA V++A    E AE  A+ I+          +  G+ +
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQ----------QAGGQAI 51

Query: 77  IKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             + ++ S + +    +        + IL+NNA
Sbjct: 52  GLECNVTSEQDLEAVVKATVSQFGGITILVNNA 84

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 13/99 (13%)

Query: 13  DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKP 72
             KT +ITG ++G G+  AQ     G +V+   R                  A  E   P
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAA-------------RADFEALHP 49

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY 111
              L + LD+  F +I     D   T   + +L+NNA Y
Sbjct: 50  DRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGY 88

Length = 277

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L  K ++ITG   G+G+  A+ L   GAK+ +   + EK E   +E             
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--------- 52

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              EV     ++   + +      I +    ++ LINNA
Sbjct: 53  -GTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNA 90

Length = 253

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 48.1 bits (115), Expect = 6e-07
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 10/93 (10%)

Query: 17  VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVL 76
           V+ITG ++GIG+ TA      GAKV++A R  E     A E+R          +  GE +
Sbjct: 3   VVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVR----------ELGGEAI 52

Query: 77  IKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               D+A    +   A    +    +   +NNA
Sbjct: 53  AVVADVADAAQVERAADTAVERFGRIDTWVNNA 85

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 48.2 bits (115), Expect = 7e-07
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 23/101 (22%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACR---DVEKAETTASEIRKHFEVATSEDKK 71
           K+V+ITGC++GIG   A  L   G +V+ ACR   DV +  +        F         
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLG------FTGIL----- 51

Query: 72  PGEVLIKKLDLASFKSI-RDCAQDINQTEANVHILINNAVY 111
                   LDL   +S+ R   + I  T+  ++ L NNA +
Sbjct: 52  --------LDLDDPESVERAADEVIALTDNRLYGLFNNAGF 84

Length = 256

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 8e-07
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 9/98 (9%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
            K  I+TG ++G G +T   L   G  VI   R+ EK E   S+  +             
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQL--------NLQQ 54

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY 111
            + +++LD+    SI +  Q + +    + +L+NNA Y
Sbjct: 55  NIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGY 91

Length = 280

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 48.0 bits (115), Expect = 8e-07
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 6/100 (6%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
           GK V+ITG ++GIGK  A+ L   GA VI+  R   K E    EI          +    
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEA------EANASGQ 54

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI 113
           +V     DL+ ++ +        +      +++N A   I
Sbjct: 55  KVSYISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISI 94

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 47.8 bits (114), Expect = 8e-07
 Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 18/97 (18%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKP 72
            KTV++TG N GIGK   ++L   GA KV  A RD   A             A    K  
Sbjct: 3   DKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSA-------------AHLVAKYG 49

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            +V+  +LD+   +SI+  A        +V ++INNA
Sbjct: 50  DKVVPLRLDVTDPESIKAAAAQAK----DVDVVINNA 82

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 16/100 (16%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-AETTASEIRKHFEVATSED 69
           +  G T++ITG  +GIG   A+    +G  VI+  R+ E+ AE  A     H EV     
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVC---- 57

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                      D+A   S R+  + + +   N+++LINNA
Sbjct: 58  -----------DVADRDSRRELVEWLKKEYPNLNVLINNA 86

Length = 245

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 14/98 (14%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGA---KVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
             V+ITGC++GIG   A  L    +   KV    RD++K                +    
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRL---------WEAAGALA 51

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            G +   +LD+   KS+    + +  TE +V +L+ NA
Sbjct: 52  GGTLETLQLDVCDSKSVAAAVERV--TERHVDVLVCNA 87

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 11/99 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            LDGK  I+TG NTG+G+  A  L   GA +I+        ET     R+  E    E +
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDET-----RRLIE---KEGR 63

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           K   V   ++DL   +S     ++  +    + IL+NNA
Sbjct: 64  K---VTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNA 99

Length = 258

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 15/99 (15%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH-FEVATSEDK 70
           LDGKT +ITG   GIG+  AQ     GA+V +A  ++E A  TA+EI      ++     
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAIS----- 55

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    LD+    SI  C   +     ++ IL+NNA
Sbjct: 56  ---------LDVTDQASIDRCVAALVDRWGSIDILVNNA 85

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK  +ITG    +G   A+ L   GAKV +  R+ EKAE   +EI+            
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK----------AA 57

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            GE L  K D+   +S+    Q I +      ILIN A
Sbjct: 58  GGEALAVKADVLDKESLEQARQQILEDFGPCDILINGA 95

Length = 278

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK  +ITG   GIG+  A  L   G  V +  R  E  +  A E+ + + V       
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV-EAYGV------- 56

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +V+I   D++ ++ +    + +     ++ ILINNA
Sbjct: 57  --KVVIATADVSDYEEVTAAIEQLKNELGSIDILINNA 92

Length = 239

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 13/98 (13%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAK-VIMACR--DVEKAETTASEIRKHFEVATSEDKK 71
            TV+ITG   G+G   A+ L   GA+ +++  R      A    +E+             
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGA-------- 52

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             EV +   D+A   ++      +      +  +++NA
Sbjct: 53  --EVTVAACDVADRDALAALLAALPAALGPLDGVVHNA 88

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK  ++TG + GIG   A  L   GA +++  R+ EKAE     I          +K+
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLI----------EKE 52

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             E      D++  ++I+   + I +    + IL+NNA
Sbjct: 53  GVEATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNA 90

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 9/99 (9%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           R  G+  ++TG + GIG   A+ L   G KV+   R V+K E  A+E +           
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQS---------A 53

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               +   + DL++ + I      I      V + INNA
Sbjct: 54  GYPTLFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNA 92

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR 59
           RL+GK  IITG ++GIG+  A+     GAKV++  R   + +   +EIR
Sbjct: 2  MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIR 51

Length = 254

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 4e-06
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 13/100 (13%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           SRL GKT +ITG  +GIG  TA+     GA+V +  RD    E   +E+           
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----------- 50

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                 L+ + D     + +  AQ + +    +  +  NA
Sbjct: 51  --GESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINA 88

Length = 249

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK  ++TG + GIG+  A+ L   GA VI++ R ++  +  A  I      A +    
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            GE+  +++D A F  IR       +    + IL+NNA
Sbjct: 66  IGEM--EQID-ALFAHIR-------ERHGRLDILVNNA 93

Length = 252

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 18/50 (36%), Positives = 28/50 (56%)

Query: 9  ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI 58
          A    GK+V++TG ++GIG+  A  L   GA+V+ A R+    +  A E 
Sbjct: 4  AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET 53

Length = 245

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 45.6 bits (109), Expect = 4e-06
 Identities = 24/98 (24%), Positives = 36/98 (36%), Gaps = 19/98 (19%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
             GKTV +TG   GIG   A      GAKVI      ++A  T  +    F         
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVI----GFDQAFLTQEDY--PFAT------- 52

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                   LD++   ++    Q +      + +L+N A
Sbjct: 53  ------FVLDVSDAAAVAQVCQRLLAETGPLDVLVNAA 84

Length = 252

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 45.5 bits (108), Expect = 6e-06
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)

Query: 11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK-----HFEVA 65
          RL GK  I+TG   G+G   A+ L   GAKV+++    E+ +  A+E+       H +V 
Sbjct: 2  RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFHLDV- 60

Query: 66 TSED 69
          T ED
Sbjct: 61 TDED 64

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 6e-06
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 11/101 (10%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSE 68
            RLDGK  ++TG   G+G   A+     GA  ++ C R+ EK E  A+E+          
Sbjct: 2   GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL------- 54

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                + +  + DL+  +  R      ++    +  L+N A
Sbjct: 55  ---GAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAA 92

Length = 260

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 7e-06
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 11/96 (11%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K   +TG  +GIG+ TA  L   GA++ +  RD +    T ++ R             G 
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADAR----------ALGGT 50

Query: 75  V-LIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           V   + LD++ + ++   A DI+    ++ +++N A
Sbjct: 51  VPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIA 86

Length = 272

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 45.0 bits (107), Expect = 7e-06
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKV-IMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
           +  I+T  ++GIGK  A  L   G  + I    D E A+ TA E+R H   A        
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAE------- 55

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              I++LDL+           + Q    + +L+NNA
Sbjct: 56  ---IRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNA 88

Length = 256

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 44.9 bits (106), Expect = 8e-06
 Identities = 39/143 (27%), Positives = 57/143 (39%), Gaps = 15/143 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L  KT I+TG   GIG  T +     GAKV +   + E AE  A++IR           K
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIR----------AK 50

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNI-----LFYSILFY 126
            G       D+    S+        Q    V +L+NNA +            L+  ++  
Sbjct: 51  GGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAI 110

Query: 127 AIPGKNVNVYAVHPGIVKTELGR 149
            + G     +AV PG+V+   GR
Sbjct: 111 NLTGALHMHHAVLPGMVERGAGR 133

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 45.1 bits (107), Expect = 8e-06
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDK 70
           L GK  ++TG ++GIGK  A  L   GA V++  R   + AE    EI+           
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIK----------A 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+ +  + D++  + +    Q   +    + IL+NNA
Sbjct: 51  VGGKAIAVQADVSKEEDVVALFQSAIKEFGTLDILVNNA 89

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.2 bits (107), Expect = 8e-06
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 15/102 (14%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
            + R  GK  +ITG   GIG+  A+     GAKV +       AE  A E+R+       
Sbjct: 1   YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAV---LYNSAENEAKELREK------ 51

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                  V   K D+ +   ++   + + +    V +L+NNA
Sbjct: 52  ------GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNA 87

Length = 255

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L G+  ++TG   G+G   A+ L G GA V++  R+    E   + +R     A      
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAA------ 62

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             E L    D+A  +++      I+     + IL+NN 
Sbjct: 63  --EALA--FDIADEEAVAAAFARIDAEHGRLDILVNNV 96

Length = 256

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GKT ++TG + G+G   A+ L   GA+V+++ R  E+ E    E   H E       
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELE----EAAAHLEALGI--- 61

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              + L    D+A    I   A++  +   +V IL+NNA
Sbjct: 62  ---DALWIAADVADEADIERLAEETLERFGHVDILVNNA 97

Length = 259

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 16/100 (16%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV--EKAETTASEIRKHFEVATSED 69
           L+GK  ++TG NTG+G+  A  L   GA ++ A R    E  +   +  R+   +     
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSL----- 57

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                      DL+  ++I+       +   ++ IL+NNA
Sbjct: 58  ---------TADLSDIEAIKALVDSAVEEFGHIDILVNNA 88

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 24/102 (23%), Positives = 37/102 (36%), Gaps = 12/102 (11%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
               L GK V ITG   G+G+ TA  L   GA+V +  R       T   +         
Sbjct: 1   MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG 60

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                       +DL   ++ R    ++N+    +  L+N A
Sbjct: 61  ------------IDLVDPQAARRAVDEVNRQFGRLDALVNIA 90

Length = 239

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 45.2 bits (108), Expect = 1e-05
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 11/98 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK  ++TG   GIGK TA+ L   GA V++A  D E AE  A+E+             
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAEL-----------GG 468

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           P   L    D+    +++   ++       V I+++NA
Sbjct: 469 PDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNA 506

Length = 681

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 16/97 (16%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K  ++TG ++GIGK TA+ L   G  V  A R V+K E  AS                  
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASL----------------G 47

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY 111
           V    LD+    SI+     I   E  + +L+NNA Y
Sbjct: 48  VHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGY 84

Length = 273

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 12/110 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE--KAETTASEIRKHFEVATSE 68
           +L GK  +ITG ++GIG+  A      GA V +     E   AE T   I          
Sbjct: 23  KLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIE--------- 73

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNI 118
            ++  + L+   DL      RD  +++ +    + IL+NNA Y     +I
Sbjct: 74  -EEGRKCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESI 122

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 10/94 (10%)

Query: 16  TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEV 75
            V+ITG  +GIG++ A      GAKV++   + + AE TA+ +R          K  G+V
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVR----------KAGGKV 50

Query: 76  LIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              K D++  + + + A+ I +   +V ILINNA
Sbjct: 51  HYYKCDVSKREEVYEAAKKIKKEVGDVTILINNA 84

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 14/101 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA--ETTASEIRKHFEVATSE 68
              GK  +ITG  +G G   A+    +G K+++A  DV++   +   +E+R         
Sbjct: 3   DFAGKVAVITGAASGFGLAFARIGAALGMKLVLA--DVQQDALDRAVAELR--------- 51

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +  EVL  + D++    +   A    +    VH+L NNA
Sbjct: 52  -AQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNA 91

Length = 287

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 44.3 bits (104), Expect = 2e-05
 Identities = 21/47 (44%), Positives = 27/47 (57%)

Query: 12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI 58
          L GK  +ITG +TGIGK  A      GA+V +A R ++  E  A EI
Sbjct: 7  LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEI 53

Length = 253

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 13/100 (13%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K V+ITGC++G G + A+ L  +G  V+  C  + K    A E+R+      S+  +   
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGC--LTKNGPGAKELRRV----CSDRLR--- 51

Query: 75  VLIKKLDLASFKSIRDCAQDINQ--TEANVHILINNAVYC 112
               +LD+   + I+  AQ + +   E  +  L+NNA   
Sbjct: 52  --TLQLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGIL 89

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L G+  ++TG + GIG   A+ L   GA+VI+  RD  K    A  ++           +
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLK----------GQ 57

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    D+    ++R            + IL+NNA
Sbjct: 58  GLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNA 95

Length = 255

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 29/103 (28%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK +I+TG ++GIG    + L   GA V+ A                        D  
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNA------------------------DIH 42

Query: 72  PGEVLIKKL-----DLASFKSIRDCAQDINQTEANVHILINNA 109
            G+   +       D++S + +     +I +    +  L+NNA
Sbjct: 43  GGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNA 85

Length = 266

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RLDGK  IITG   GIGK  A T    GA V+++  + + A     EI+          +
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ----------Q 57

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+    + D+ S + +   A         V IL+NNA
Sbjct: 58  LGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNA 96

Length = 255

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 14/110 (12%)

Query: 1   MSASKAVS-ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR 59
           M+ +K    A  L GK  ++TG  +GIG   A+     GA+V +  R  + AE  A  + 
Sbjct: 1   MTDTKQFDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLG 60

Query: 60  KHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            + +                 D++  +S+      +      + IL+N+A
Sbjct: 61  GNAKGLV-------------CDVSDSQSVEAAVAAVISAFGRIDILVNSA 97

Length = 255

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 127 AIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL 186
           A  G      A HPG+  TEL R +     P A  L  +L     ++PE GA  TL  A 
Sbjct: 197 AAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLL----AQSPEMGALPTLRAAT 252

Query: 187 DEGAAKETGLYY 198
           D       G YY
Sbjct: 253 DPAVRG--GQYY 262

Length = 306

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 13/108 (12%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L+GK  I+TG   GIG   A  L   GA+V++A  D   A+   ++I             
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI------------- 47

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNIL 119
            G  L  ++D+   + +    +   +    + +L+NNA    L+  I+
Sbjct: 48  AGGALALRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAII 95

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 6/52 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA----ETTASEIR 59
           L GK  ++TG   GIG   A+ L   GA V+  C DV  A       A+ + 
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVV--CLDVPAAGEALAAVANRVG 257

Length = 450

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 6  AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE 57
              + L GK V++TG   GIG   A+ L+  GAK+ +   +  +    A+E
Sbjct: 1  GPPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAE 52

Length = 296

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 42.3 bits (99), Expect = 4e-05
 Identities = 23/54 (42%), Positives = 29/54 (53%)

Query: 5  KAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI 58
          + V   +L GK  I+TG   GIG+ TA  L   GAKVI+   D E  + T  EI
Sbjct: 7  EGVMKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI 60

Length = 169

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 43.0 bits (101), Expect = 5e-05
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 10/101 (9%)

Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSE 68
            S L+GKT ++TG  +GIGK  A  L   GA V +A  + + A   A EI          
Sbjct: 2   MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEIN--------- 52

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            K  G+ +   +D+ +  ++      + +   +V IL++NA
Sbjct: 53  -KAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNA 92

Length = 262

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.8 bits (101), Expect = 5e-05
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 11/100 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAK-VIMACRDVEKAETTASEIRKHFEVATSED 69
              GK  ++TG + GIGK  A  L   G    +   R  + AE TA EI           
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIE---------- 50

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               + L  K ++   + I++    I++    + + +NNA
Sbjct: 51  ALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNA 90

Length = 250

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 42.4 bits (100), Expect = 6e-05
 Identities = 20/50 (40%), Positives = 26/50 (52%)

Query: 10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR 59
              GK  ++TG   GIG+ TA      GAKV++A RD    E T + IR
Sbjct: 3  MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIR 52

Length = 253

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 42.5 bits (100), Expect = 6e-05
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 16/97 (16%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
             V+ITGC++GIG+  A      G +V    R  E  E  A+                  
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA----------------G 45

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY 111
               +LD+    ++   A+++      + +LINNA Y
Sbjct: 46  FTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGY 82

Length = 274

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           L G  V+ITG ++GIG+ TA+     GA++++A RD E  +  A E R 
Sbjct: 4  PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA 53

Length = 330

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 16/96 (16%)

Query: 17  VIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEV 75
           V+ITG + GIG    + L   G   VI  CRD   A   A+    H             +
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASH-----------SRL 49

Query: 76  LIKKLDLASFKSIRDCAQDINQT--EANVHILINNA 109
            I +LD+     I + A+ + +   +A + +LINNA
Sbjct: 50  HILELDVTD--EIAESAEAVAERLGDAGLDVLINNA 83

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 8/98 (8%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GKT++ITG    IG    + +   G  VI A  D E        + K F+        
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLS--- 58

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                + +LD+   +S+ +      +    +   +N A
Sbjct: 59  -----LVELDITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 42.2 bits (100), Expect = 8e-05
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 17/105 (16%)

Query: 7   VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVAT 66
           +   R  GK V++TG   GIG+  A      GA+V++    V+++E          EVA 
Sbjct: 1   MMNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVL----VDRSELVH-------EVAA 49

Query: 67  SEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEA---NVHILINN 108
                 GE L    DL ++         +         + +LINN
Sbjct: 50  ELRAAGGEALALTADLETYA---GAQAAMAAAVEAFGRIDVLINN 91

Length = 260

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 42.1 bits (99), Expect = 9e-05
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 11/99 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           R +GK V++TG   GIG+  A+ L G GA+V++  R  E      +EI            
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEIL----------A 49

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                 +   DL ++   +   +   +    V +LINN 
Sbjct: 50  AGDAAHVHTADLETYAGAQGVVRAAVERFGRVDVLINNV 88

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK ++ITG   GIG + A  L   GA++I+     E+AE   +++R+    A +    
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHA---- 62

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    ++   + +    + I +    + +LINNA
Sbjct: 63  ------APFNVTHKQEVEAAIEHIEKDIGPIDVLINNA 94

Length = 254

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIR 59
          L GKT ++TG + GIG  TA+ L G GA V++  R    +A    +EI 
Sbjct: 4  LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIE 52

Length = 248

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 15/109 (13%)

Query: 3   ASKAVSASRL--DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           AS A + S L    + V ITG   GIG+  A      G ++++  RD E A+  A     
Sbjct: 256 ASTAQAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLA----- 310

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             E          E L  + D+    ++      I      + +L+NNA
Sbjct: 311 --EALG------DEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNA 351

Length = 520

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 17/98 (17%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           ++++ITGC++GIG   A+ L   G +V   CR  E      +E  + F            
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAF------------ 52

Query: 75  VLIKKLDLASFKSIRDCAQD-INQTEANVHILINNAVY 111
               +LD A  +SI       +  +   +  L NN  Y
Sbjct: 53  ----QLDYAEPESIAALVAQVLELSGGRLDALFNNGAY 86

Length = 277

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 12/94 (12%)

Query: 17  VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAET-TASEIRKHFEVATSEDKKPGEV 75
           V++TG   GIG   A+ L   GA+V    R+ E+     A   R  +  AT         
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFAT--------- 51

Query: 76  LIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              KLD+A   ++ +  Q + +    + +L+N A
Sbjct: 52  --YKLDVADSAAVDEVVQRLEREYGPIDVLVNVA 83

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 18/49 (36%), Positives = 30/49 (61%)

Query: 10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI 58
           RL+GK  I+TG  +G G+  A+     GA+V++A  + + AE  A++I
Sbjct: 1  MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADI 49

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 15/101 (14%)

Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSE 68
           + RL G+  +ITG  +GIG  TA+ L   GA V++   D E  +  A E+          
Sbjct: 2   SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV---------- 51

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                  L    D+    ++        +T  +V I  NNA
Sbjct: 52  -----GGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNA 87

Length = 255

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIM-ACRDVEKAETTASEIRKHFEVATSEDK 70
           L  K V++TG   GIG+  A  L   G+ V++ A +  E+   T   ++++         
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--------- 54

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             GE +    D+++ +     A+          IL+NNA
Sbjct: 55  -GGEGIGVLADVSTREGCETLAKATIDRYGVADILVNNA 92

Length = 252

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR 59
          RLD +  ++TG   G+G   A      GA V++A R   + +  A +IR
Sbjct: 7  RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIR 55

Length = 263

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 10/97 (10%)

Query: 13  DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKP 72
           D +  ++ G ++GIG  TA  L   G  V +  R VEK E    +IR             
Sbjct: 9   DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIR----------ADG 58

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           GE +   LD+    S++       +    + +L++ A
Sbjct: 59  GEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGA 95

Length = 274

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 18/95 (18%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K  ++TG ++GIG+ TA+ L   G +V    R+  +A                    PG 
Sbjct: 5   KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-----------------IPGV 47

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            L+ +LD+    S++    ++      + +L+NNA
Sbjct: 48  ELL-ELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81

Length = 270

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 11/99 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDK 70
           L GK  ++TG + GIG+  A+ L   GA V++        AE   +EI            
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIE----------A 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+ +  + D++    +        +    V IL+NNA
Sbjct: 51  AGGKAIAVQADVSDPSQVARLFDAAEKAFGGVDILVNNA 89

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 12/98 (12%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           LDG  V++TG  +GIG+  A+     GA+V +          TA+ +      AT     
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTAT----- 63

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    D+A    +        +    + +L+NNA
Sbjct: 64  -------VADVADPAQVERVFDTAVERFGGLDVLVNNA 94

Length = 264

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 21/49 (42%), Positives = 31/49 (63%)

Query: 11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR 59
          RLDGK  IITG  +GIG+ TA+     GA+V++A  D +  +  A+E+ 
Sbjct: 1  RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELG 49

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 14/98 (14%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
           G   ++TG   GIGK  A+ L   G  VI+  R  EK +  A EI         E+K   
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEI---------EEKYGV 51

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHI--LINNA 109
           E      D   F +  D  + I +    + I  L+NN 
Sbjct: 52  ETKTIAAD---FSAGDDIYERIEKELEGLDIGILVNNV 86

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query: 12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR 59
          L GK V+++G   G+G+  A      GA V++A R  E+ +  A+EI 
Sbjct: 3  LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEID 50

Length = 258

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 15/52 (28%), Positives = 25/52 (48%)

Query: 8  SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR 59
          +     GK V++ G  +GI    AQ     GA V +A R  EK +   ++++
Sbjct: 3  TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQ 54

Length = 264

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 11/100 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSED 69
            L G+  ++TG   G+G+  A  L   GA V++  R D E AE     +           
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-------- 54

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    + D+    ++        +    + IL+NNA
Sbjct: 55  --GRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNA 92

Length = 249

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 14/96 (14%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
           G   ++TG  +G+G  T + L   GAKV++        ET          VA   D    
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGET----------VAKLGDN--- 48

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                 +D+ S K ++            + I++N A
Sbjct: 49  -CRFVPVDVTSEKDVKAALALAKAKFGRLDIVVNCA 83

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 17/48 (35%), Positives = 25/48 (52%)

Query: 12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR 59
             +T ++TG  +GIGK  A  L   GA V++  R+ +K    A EI 
Sbjct: 5  FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIE 52

Length = 276

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 26/110 (23%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIM---------ACRDVEKAETTASEIRKH 61
           R DG+ V++TG   G+G+  A      GAKV++         + +    A+    EI+  
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 62  F--EVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               VA  +  + GE ++K   + +F                V IL+NNA
Sbjct: 62  GGKAVANYDSVEDGEKIVKTA-IDAF--------------GRVDILVNNA 96

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 22/110 (20%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA------------ETTASEIR 59
           L GK   +TG + GIG+  A  L   GA V++A +   +             E TA EI 
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 60  KHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                        G+ L   +D+     +R   +        + IL+NNA
Sbjct: 61  ----------AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNA 100

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 17/99 (17%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K  ++TG   GIG   A+ L   G +VI                    + A    ++ G 
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIAT-------------YFSGNDCAKDWFEEYGF 49

Query: 75  ----VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               V +K+LD+   +   +   +I + E  V IL+NNA
Sbjct: 50  TEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNA 88

Length = 245

>gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 2  SASKAVSASRLD--GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR 59
          +A KA+     D  GKT ++ G    +G+  A  L   GA+V++  RD+E+A+  A  +R
Sbjct: 14 AAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLR 73

Query: 60 KHF-----EVATSEDKKPGEVL 76
            F      V TS+D      +
Sbjct: 74 ARFGEGVGAVETSDDAARAAAI 95

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDK 70
           L+GK V+ITG +TG+G+  A       AKV++  R D E+A   A EI+          K
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIK----------K 54

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             GE +  K D+     + +  Q   +    + ++INNA
Sbjct: 55  AGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNA 93

Length = 261

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 39.5 bits (92), Expect = 5e-04
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI 58
          L  KT+++TG + G+G+  A+     GA VI+  R  +K E     I
Sbjct: 4  LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAI 50

Length = 239

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 39.5 bits (92), Expect = 7e-04
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 18/101 (17%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVI---MACRDVEKAETTASEIRKHFEVATSE 68
           L+GK  IITGCNTG+G+  A  L   GA ++   +A     +A+  A   + HF  A   
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITAD-- 63

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                  LI++ D+ S       +Q +     ++ ILINNA
Sbjct: 64  -------LIQQKDIDSI-----VSQAVEVM-GHIDILINNA 91

Length = 251

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 15/97 (15%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI-RKHFEVATSEDKKP 72
            + V++TG   GIG+   Q     G +V++A R+VE+A   A  +   H  +A       
Sbjct: 5   SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALA------- 57

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                  +D++    IR+  + +++    + +L+NNA
Sbjct: 58  -------MDVSDEAQIREGFEQLHREFGRIDVLVNNA 87

Length = 520

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 18/47 (38%), Positives = 24/47 (51%)

Query: 12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI 58
          L  + +++TG   GIG+  A T    GA VI+  R  EK E    EI
Sbjct: 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEI 56

Length = 247

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 10/95 (10%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K  IITG  +GIG  TA+ L   GAKV +  R+                          +
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAA----------ELQAINPKVK 50

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               + D+ S++ +    +   +    V ILINNA
Sbjct: 51  ATFVQCDVTSWEQLAAAFKKAIEKFGRVDILINNA 85

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 38.3 bits (90), Expect = 0.001
 Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 19/99 (19%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GK  ++TG   GIG  T   L   GA+V+   R   + +     +   F  A     
Sbjct: 6   ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTAR--SRPDDLPEGV--EFVAA----- 56

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                     DL + +     A+ + +    V IL++  
Sbjct: 57  ----------DLTTAEGCAAVARAVLERLGGVDILVHVL 85

Length = 260

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 20/86 (23%)

Query: 130 GKNVNVYAVHPGIVKTELGRYM-----------DDTYFPGARTLGRVLMWWWMKTPEQGA 178
            + V  ++VHPG + T L R++           D+   P              KTP QGA
Sbjct: 201 DQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGF---------KTPAQGA 251

Query: 179 QTTLHCALDEGAAKETGLYYSDYKVA 204
            T +  A     A   GLY  D  +A
Sbjct: 252 ATQVWAATSPQLAGMGGLYCEDCDIA 277

Length = 315

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 9/106 (8%)

Query: 6   AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVA 65
             S  R   K VI+TG + GIG+   +     GAKV+   R     +   SE+ +     
Sbjct: 1   MASGLRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNR----- 55

Query: 66  TSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY 111
                 PG       D+   + I+       +    +  L+NNA +
Sbjct: 56  ----AGPGSCKFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGW 97

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 10/98 (10%)

Query: 13  DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-AETTASEIRKHFEVATSEDKK 71
             K  +ITG    IG   A+TL+  G +V +        A+  A+E+            +
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL---------NALR 55

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           PG     + DL    ++ +           +  L+NNA
Sbjct: 56  PGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNA 93

Length = 249

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 10/97 (10%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIM-ACRDVEKAETTASEIRKHFEVATSEDKKP 72
           GK  ++TG  +GIG   A+ L   GA +++    D  + E            A    K  
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEA---------VRAGLAAKHG 52

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            +VL    DL+   +I D      +    V IL+NNA
Sbjct: 53  VKVLYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNA 89

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 37.2 bits (86), Expect = 0.003
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L+ + +++TG + GIG+  A T    GA VI+  R+ EK    A  I         E  +
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHIN-------EEGGR 54

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +  I  L   + ++ +  AQ I      +  +++NA
Sbjct: 55  QPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNA 92

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 19/100 (19%)

Query: 13  DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKP 72
           DGK  +IT    GIG+  A      GA VI            A++I    E    E ++ 
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVI------------ATDIN---EEKLKELERG 45

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC 112
             +  + LD+   + +   A++  +    + +L N A + 
Sbjct: 46  PGITTRVLDVTDKEQVAALAKEEGR----IDVLFNCAGFV 81

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 11/101 (10%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSE 68
            +L+GK  I+TG   GIGK     L   GAKV++      E AE   +E+          
Sbjct: 2   VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELG--------- 52

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            K+  +V   + D++  +      ++       V IL+NNA
Sbjct: 53  -KEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNA 92

Length = 247

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	222
KOG1200|consensus	256		100.0
PRK08339	263	short chain dehydrogenase; Provisional	99.97
KOG0725|consensus	270		99.97
PRK05867	253	short chain dehydrogenase; Provisional	99.97
PRK08303	305	short chain dehydrogenase; Provisional	99.97
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.97
PRK07063	260	short chain dehydrogenase; Provisional	99.96
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.96
PRK06114	254	short chain dehydrogenase; Provisional	99.96
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.96
KOG1208|consensus	314		99.96
PRK07478	254	short chain dehydrogenase; Provisional	99.96
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK08589	272	short chain dehydrogenase; Validated	99.96
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.96
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.96
PRK07062	265	short chain dehydrogenase; Provisional	99.96
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.96
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK08265	261	short chain dehydrogenase; Provisional	99.95
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.95
PRK07035	252	short chain dehydrogenase; Provisional	99.95
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.95
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.95
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.95
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.95
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.95
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.95
PRK07831	262	short chain dehydrogenase; Provisional	99.95
PRK06172	253	short chain dehydrogenase; Provisional	99.95
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.95
PRK07791	286	short chain dehydrogenase; Provisional	99.95
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.95
PRK05854	313	short chain dehydrogenase; Provisional	99.95
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.95
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.95
PRK06128	300	oxidoreductase; Provisional	99.95
PRK09242	257	tropinone reductase; Provisional	99.94
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.94
PRK08226	263	short chain dehydrogenase; Provisional	99.94
PRK08643	256	acetoin reductase; Validated	99.94
PRK07985	294	oxidoreductase; Provisional	99.94
PRK12747	252	short chain dehydrogenase; Provisional	99.94
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.94
PRK06940	275	short chain dehydrogenase; Provisional	99.94
PRK12743	256	oxidoreductase; Provisional	99.94
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.94
PRK06125	259	short chain dehydrogenase; Provisional	99.94
PRK06484	520	short chain dehydrogenase; Validated	99.94
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.94
PRK06841	255	short chain dehydrogenase; Provisional	99.94
PRK06398	258	aldose dehydrogenase; Validated	99.94
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
KOG1205|consensus	282		99.94
PLN02253	280	xanthoxin dehydrogenase	99.94
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.93
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.93
PRK07856	252	short chain dehydrogenase; Provisional	99.93
PRK08278	273	short chain dehydrogenase; Provisional	99.93
PRK06949	258	short chain dehydrogenase; Provisional	99.93
PRK07677	252	short chain dehydrogenase; Provisional	99.93
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
KOG1201|consensus	300		99.93
PRK12939	250	short chain dehydrogenase; Provisional	99.93
PRK05872	296	short chain dehydrogenase; Provisional	99.93
PRK08862	227	short chain dehydrogenase; Provisional	99.93
PRK06139	330	short chain dehydrogenase; Provisional	99.93
PRK07067	257	sorbitol dehydrogenase; Provisional	99.93
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK05599	246	hypothetical protein; Provisional	99.93
PRK06197	306	short chain dehydrogenase; Provisional	99.93
PRK07890	258	short chain dehydrogenase; Provisional	99.93
PRK07814	263	short chain dehydrogenase; Provisional	99.92
PRK06196	315	oxidoreductase; Provisional	99.92
KOG1207|consensus	245		99.92
PRK06701	290	short chain dehydrogenase; Provisional	99.92
PRK12744	257	short chain dehydrogenase; Provisional	99.92
KOG4169|consensus	261		99.92
PRK08628	258	short chain dehydrogenase; Provisional	99.92
PRK12937	245	short chain dehydrogenase; Provisional	99.92
PRK05717	255	oxidoreductase; Validated	99.92
PRK08703	239	short chain dehydrogenase; Provisional	99.92
PRK07576	264	short chain dehydrogenase; Provisional	99.92
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.92
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.92
PRK06523	260	short chain dehydrogenase; Provisional	99.92
PRK06500	249	short chain dehydrogenase; Provisional	99.92
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK07774	250	short chain dehydrogenase; Provisional	99.92
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.92
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.92
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.92
PRK07109	334	short chain dehydrogenase; Provisional	99.91
PRK12742	237	oxidoreductase; Provisional	99.91
PRK09186	256	flagellin modification protein A; Provisional	99.91
PRK05866	293	short chain dehydrogenase; Provisional	99.91
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.91
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.91
PRK05876	275	short chain dehydrogenase; Provisional	99.91
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.91
PRK06484	520	short chain dehydrogenase; Validated	99.91
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.91
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.91
PRK06483	236	dihydromonapterin reductase; Provisional	99.9
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.9
PRK06198	260	short chain dehydrogenase; Provisional	99.9
PRK06138	252	short chain dehydrogenase; Provisional	99.9
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.9
PRK07069	251	short chain dehydrogenase; Validated	99.9
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.9
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK05875	276	short chain dehydrogenase; Provisional	99.9
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.9
PRK06123	248	short chain dehydrogenase; Provisional	99.9
PRK07454	241	short chain dehydrogenase; Provisional	99.9
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.9
PRK07825	273	short chain dehydrogenase; Provisional	99.9
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.89
PRK06057	255	short chain dehydrogenase; Provisional	99.89
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.89
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK07806	248	short chain dehydrogenase; Provisional	99.89
PRK05884	223	short chain dehydrogenase; Provisional	99.89
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.89
PRK06182	273	short chain dehydrogenase; Validated	99.89
PRK05855	582	short chain dehydrogenase; Validated	99.89
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.89
PRK12746	254	short chain dehydrogenase; Provisional	99.89
PRK07832	272	short chain dehydrogenase; Provisional	99.89
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.89
PRK07904	253	short chain dehydrogenase; Provisional	99.89
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.89
PLN00015	308	protochlorophyllide reductase	99.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.89
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.88
PRK07074	257	short chain dehydrogenase; Provisional	99.88
PRK05650	270	short chain dehydrogenase; Provisional	99.88
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK12827	249	short chain dehydrogenase; Provisional	99.88
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.88
PLN02780	320	ketoreductase/ oxidoreductase	99.88
PRK09072	263	short chain dehydrogenase; Provisional	99.88
PRK09134	258	short chain dehydrogenase; Provisional	99.88
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.88
KOG1199|consensus	260		99.88
PRK08251	248	short chain dehydrogenase; Provisional	99.88
PRK07024	257	short chain dehydrogenase; Provisional	99.88
KOG1611|consensus	249		99.88
PRK07060	245	short chain dehydrogenase; Provisional	99.87
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.87
PRK08263	275	short chain dehydrogenase; Provisional	99.87
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK12828	239	short chain dehydrogenase; Provisional	99.87
PRK07775	274	short chain dehydrogenase; Provisional	99.87
PRK06914	280	short chain dehydrogenase; Provisional	99.87
PRK08267	260	short chain dehydrogenase; Provisional	99.86
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK09135	249	pteridine reductase; Provisional	99.86
PRK10538	248	malonic semialdehyde reductase; Provisional	99.86
PRK06181	263	short chain dehydrogenase; Provisional	99.86
PRK06180	277	short chain dehydrogenase; Provisional	99.86
PRK07577	234	short chain dehydrogenase; Provisional	99.85
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK05993	277	short chain dehydrogenase; Provisional	99.85
PRK06194	287	hypothetical protein; Provisional	99.85
PRK06179	270	short chain dehydrogenase; Provisional	99.85
PRK07102	243	short chain dehydrogenase; Provisional	99.85
PRK07201	657	short chain dehydrogenase; Provisional	99.85
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.85
PRK06924	251	short chain dehydrogenase; Provisional	99.85
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK05693	274	short chain dehydrogenase; Provisional	99.84
PRK12829	264	short chain dehydrogenase; Provisional	99.84
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.84
PRK07041	230	short chain dehydrogenase; Provisional	99.84
PRK07326	237	short chain dehydrogenase; Provisional	99.84
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK08324	681	short chain dehydrogenase; Validated	99.83
PRK08177	225	short chain dehydrogenase; Provisional	99.83
PRK06482	276	short chain dehydrogenase; Provisional	99.82
COG1028	251	FabG Dehydrogenases with different specificities (	99.81
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.81
PRK06101	240	short chain dehydrogenase; Provisional	99.81
KOG1014|consensus	312		99.79
PRK07023	243	short chain dehydrogenase; Provisional	99.79
PRK07578	199	short chain dehydrogenase; Provisional	99.78
PRK12367	245	short chain dehydrogenase; Provisional	99.78
PRK08264	238	short chain dehydrogenase; Validated	99.77
PRK09291	257	short chain dehydrogenase; Provisional	99.75
PRK08017	256	oxidoreductase; Provisional	99.75
PRK06953	222	short chain dehydrogenase; Provisional	99.75
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.73
KOG1209|consensus	289		99.72
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.71
KOG1610|consensus	322		99.7
PLN03209	576	translocon at the inner envelope of chloroplast su	99.7
KOG1210|consensus	331		99.7
KOG1478|consensus	341		99.69
PRK06720	169	hypothetical protein; Provisional	99.69
PRK08219	227	short chain dehydrogenase; Provisional	99.69
KOG1204|consensus	253		99.67
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.67
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.59
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.58
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.53
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.52
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.43
KOG1502|consensus	327		99.43
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.25
PRK08309	177	short chain dehydrogenase; Provisional	99.24
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.22
PLN02583	297	cinnamoyl-CoA reductase	99.18
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.17
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.14
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.12
PLN02653	340	GDP-mannose 4,6-dehydratase	99.11
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.08
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.06
PLN02240	352	UDP-glucose 4-epimerase	99.01
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.0
PLN02214	342	cinnamoyl-CoA reductase	99.0
PLN02572	442	UDP-sulfoquinovose synthase	98.99
PLN00198	338	anthocyanidin reductase; Provisional	98.97
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.95
PLN02650	351	dihydroflavonol-4-reductase	98.91
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	98.88
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.86
PLN02686	367	cinnamoyl-CoA reductase	98.86
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.83
PLN02427	386	UDP-apiose/xylose synthase	98.8
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.78
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.77
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	98.75
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.74
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.71
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.71
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.7
KOG1371|consensus	343		98.7
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.67
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.66
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.65
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.6
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.6
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.59
CHL00194	317	ycf39 Ycf39; Provisional	98.59
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.58
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.58
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.56
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.5
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.48
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.45
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.45
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.42
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.41
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.39
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.36
PLN02260	668	probable rhamnose biosynthetic enzyme	98.36
PRK05865	854	hypothetical protein; Provisional	98.36
KOG4022|consensus	236		98.34
PLN02206	442	UDP-glucuronate decarboxylase	98.32
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.31
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.31
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.28
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.27
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	98.23
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.23
PRK12320	699	hypothetical protein; Provisional	98.19
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.16
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.14
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.12
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.11
PRK07201	657	short chain dehydrogenase; Provisional	98.1
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.1
KOG2733|consensus	423		98.1
PLN02996	491	fatty acyl-CoA reductase	98.07
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.06
PLN02503	605	fatty acyl-CoA reductase 2	98.04
PLN02778	298	3,5-epimerase/4-reductase	98.01
COG3320	382	Putative dehydrogenase domain of multifunctional n	97.99
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.98
PRK14982	340	acyl-ACP reductase; Provisional	97.95
KOG2865|consensus	391		97.92
PLN00016	378	RNA-binding protein; Provisional	97.92
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.92
PRK09620	229	hypothetical protein; Provisional	97.91
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	97.86
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	97.81
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.79
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	97.74
PLN02260	668	probable rhamnose biosynthetic enzyme	97.73
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.72
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.71
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	97.7
KOG1221|consensus	467		97.63
KOG1430|consensus	361		97.56
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.5
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.48
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.45
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.44
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.4
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.39
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	97.39
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.36
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.32
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.29
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.29
PRK06849	389	hypothetical protein; Provisional	97.29
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.25
COG3268	382	Uncharacterized conserved protein [Function unknow	97.23
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.12
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.05
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.95
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.95
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	96.94
COG2910	211	Putative NADH-flavin reductase [General function p	96.94
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.92
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.92
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.9
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.89
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.84
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.83
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.8
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.79
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.79
KOG1202|consensus	2376		96.78
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.74
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.74
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.73
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.73
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.72
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.68
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.68
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.68
KOG1372|consensus	376		96.67
PTZ00325	321	malate dehydrogenase; Provisional	96.66
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.64
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.64
PLN00106	323	malate dehydrogenase	96.63
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.62
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.58
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.57
PRK08655	437	prephenate dehydrogenase; Provisional	96.57
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.54
PLN00203	519	glutamyl-tRNA reductase	96.51
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.51
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.51
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.49
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.48
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.47
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.46
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.46
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.43
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.43
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.42
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.41
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.4
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.38
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.37
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.37
KOG1198|consensus	347		96.35
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.33
KOG1429|consensus	350		96.32
PRK05086	312	malate dehydrogenase; Provisional	96.3
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.27
KOG1203|consensus	411		96.25
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.15
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.15
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.1
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.09
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.07
PRK04148	134	hypothetical protein; Provisional	96.07
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.06
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.05
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	96.02
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.99
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.98
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	95.98
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.96
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	95.95
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	95.94
PRK09496	453	trkA potassium transporter peripheral membrane com	95.94
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.92
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.9
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.9
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	95.89
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.87
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.84
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.84
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.81
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.81
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.81
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.8
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	95.77
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.75
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.74
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.72
PRK08223	287	hypothetical protein; Validated	95.72
PRK13243	333	glyoxylate reductase; Reviewed	95.71
PRK12480	330	D-lactate dehydrogenase; Provisional	95.7
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.65
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.64
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.62
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	95.62
PRK14968	188	putative methyltransferase; Provisional	95.59
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.54
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.47
KOG1431|consensus	315		95.47
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.43
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.41
PRK08328	231	hypothetical protein; Provisional	95.39
PRK09496	453	trkA potassium transporter peripheral membrane com	95.37
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.37
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.35
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	95.35
PRK14851	679	hypothetical protein; Provisional	95.32
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.3
PLN02602	350	lactate dehydrogenase	95.29
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.27
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.27
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	95.24
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	95.24
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.24
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	95.23
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.22
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.16
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.16
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.16
PLN02928	347	oxidoreductase family protein	95.14
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.11
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.1
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.09
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.09
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.09
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.08
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.06
PRK11730	715	fadB multifunctional fatty acid oxidation complex	95.06
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	95.04
PRK07877	722	hypothetical protein; Provisional	95.02
KOG4039|consensus	238		94.98
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.95
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.94
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.93
PLN02740	381	Alcohol dehydrogenase-like	94.82
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	94.81
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.81
PRK07411	390	hypothetical protein; Validated	94.8
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.78
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	94.78
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.76
PLN03139	386	formate dehydrogenase; Provisional	94.73
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	94.7
PRK14852	989	hypothetical protein; Provisional	94.68
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	94.62
PRK13771	334	putative alcohol dehydrogenase; Provisional	94.62
KOG0023|consensus	360		94.61
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	94.6
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	94.58
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.56
KOG0069|consensus	336		94.56
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	94.55
PLN02396	322	hexaprenyldihydroxybenzoate methyltransferase	94.53
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.52
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.51
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.51
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.46
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	94.43
PRK07574	385	formate dehydrogenase; Provisional	94.39
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.38
PRK11207	197	tellurite resistance protein TehB; Provisional	94.38
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.31
PF05185	448	PRMT5: PRMT5 arginine-N-methyltransferase; InterPr	94.31
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.3
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	94.3
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	94.28
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.26
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.26
PRK06487	317	glycerate dehydrogenase; Provisional	94.24
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	94.24
PF13649	101	Methyltransf_25: Methyltransferase domain; PDB: 3B	94.23
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	94.21
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.21
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.17
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.17
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.16
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	94.15
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.14
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.12

>KOG1200|consensus

Probab=100.00  E-value=5.8e-33  Score=210.79  Aligned_cols=174  Identities=24%  Similarity=0.248  Sum_probs=152.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +..|+++|||+++|||+++++.|+++|++|++.+++.+..++....|..           .++...+.||+++..+++..
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g-----------~~~h~aF~~DVS~a~~v~~~   80 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG-----------YGDHSAFSCDVSKAHDVQNT   80 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC-----------CCccceeeeccCcHHHHHHH
Confidence            4568999999999999999999999999999999999988888777643           24677899999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH-------------------h------------------------hh------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI-------------------L------------------------SN------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~-------------------l------------------------~~------------  116 (222)
                      +++..+.+++++++|||||+..                   |                        +|            
T Consensus        81 l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G  160 (256)
T KOG1200|consen   81 LEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG  160 (256)
T ss_pred             HHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc
Confidence            9999999999999999999987                   0                        00            


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +++|+++.|+|+++++||||.|.||++.|||+..+++. ...+.....|++|  ...+||+|..+.||| 
T Consensus       161 QtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~-v~~ki~~~iPmgr--~G~~EevA~~V~fLA-  236 (256)
T KOG1200|consen  161 QTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPK-VLDKILGMIPMGR--LGEAEEVANLVLFLA-  236 (256)
T ss_pred             chhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHH-HHHHHHccCCccc--cCCHHHHHHHHHHHh-
Confidence                      89999999999999999999999999999999999864 2223335678888  899999999999998 


Q ss_pred             CCCccccccccccc
Q psy7936         187 DEGAAKETGLYYSD  200 (222)
Q Consensus       187 ~~~~~~~~G~~i~~  200 (222)
                      ++.+.|++|+.+..
T Consensus       237 S~~ssYiTG~t~ev  250 (256)
T KOG1200|consen  237 SDASSYITGTTLEV  250 (256)
T ss_pred             ccccccccceeEEE
Confidence            66789999999843

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.2e-31  Score=216.11  Aligned_cols=186  Identities=17%  Similarity=0.120  Sum_probs=149.0

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++|++|+++||||++|||+++|+.|+++|++|++++|+.+.++++.+.+...         .+.++.++++|+++.+++
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~Dv~~~~~i   73 (263)
T PRK08339          3 KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE---------SNVDVSYIVADLTKREDL   73 (263)
T ss_pred             ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---------cCCceEEEEecCCCHHHH
Confidence            34588999999999999999999999999999999999999888888777653         245788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      +++++.+. .++++|++|||||....                +|                                    
T Consensus        74 ~~~~~~~~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~  152 (263)
T PRK08339         74 ERTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP  152 (263)
T ss_pred             HHHHHHHH-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC
Confidence            99999985 57899999999986430                00                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC----------CCCcchhhhHHHHHHHhcCChH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD----------TYFPGARTLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~p~  175 (222)
                                 +..|+++++.|++++||+||+|+||+++|+|......          .+.........|+++  +.+|+
T Consensus       153 ~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~  230 (263)
T PRK08339        153 NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGR--LGEPE  230 (263)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCccc--CcCHH
Confidence                       8899999999999999999999999999998643210          000011112235555  78999


Q ss_pred             HHHHHHHHHhcCCCcccccccccccccccccC
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDYKVAKSR  207 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~~~  207 (222)
                      |+|..+.||+ ++...++||+.+..++....+
T Consensus       231 dva~~v~fL~-s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        231 EIGYLVAFLA-SDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHHHHHHHh-cchhcCccCceEEECCCcccc
Confidence            9999999996 556789999999655554444

>KOG0725|consensus

Probab=99.97  E-value=3.4e-30  Score=211.77  Aligned_cols=185  Identities=30%  Similarity=0.306  Sum_probs=152.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      +..+.+|+++|||+++|||+++|+.|++.|++|++++|+++.+++....+.....       .+.++..+.||+++.+++
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~~   75 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGY-------TGGKVLAIVCDVSKEVDV   75 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-------CCCeeEEEECcCCCHHHH
Confidence            4568999999999999999999999999999999999999999999988876421       256799999999999999


Q ss_pred             HHHHHHHHhh-ccceeEEEechhhHHhh-----------------h----------------------------------
Q psy7936          89 RDCAQDINQT-EANVHILINNAVYCILS-----------------N----------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~-~~~id~li~~ag~~~l~-----------------~----------------------------------  116 (222)
                      +++++...+. ++++|++|||||.....                 |                                  
T Consensus        76 ~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~  155 (270)
T KOG0725|consen   76 EKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVG  155 (270)
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccccc
Confidence            9999998888 79999999999988711                 0                                  


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCC-CCCC---CCcch--hhhHHHHHHHhcCChH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRY-MDDT---YFPGA--RTLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~-~~~~---~~~~~--~~~~~~~~~~~~~~p~  175 (222)
                                     +.++++++|.|+.++|||||+|+||++.|++... ....   ++...  .....|+++  ..+|+
T Consensus       156 ~~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr--~g~~~  233 (270)
T KOG0725|consen  156 PGPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGR--VGTPE  233 (270)
T ss_pred             CCCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCC--ccCHH
Confidence                           8999999999999999999999999999998221 1111   11111  112346777  89999


Q ss_pred             HHHHHHHHHhcCCCcccccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+|..+.||+.++.+ |++|+.+..++.
T Consensus       234 eva~~~~fla~~~as-yitG~~i~vdgG  260 (270)
T KOG0725|consen  234 EVAEAAAFLASDDAS-YITGQTIIVDGG  260 (270)
T ss_pred             HHHHhHHhhcCcccc-cccCCEEEEeCC
Confidence            999999999877656 999999954443

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-30  Score=210.23  Aligned_cols=180  Identities=25%  Similarity=0.279  Sum_probs=148.8

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +++++++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.++..          +.++.++.+|+++.++
T Consensus         3 ~~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~~   72 (253)
T PRK05867          3 DLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS----------GGKVVPVCCDVSQHQQ   72 (253)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc----------CCeEEEEEccCCCHHH
Confidence            345678999999999999999999999999999999999999888888777653          4578899999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      +.++++++.+.++++|++|||||....                +|                                   
T Consensus        73 ~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  152 (253)
T PRK05867         73 VTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII  152 (253)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC
Confidence            999999999999999999999987430                00                                   


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                     +..++++++.+++++||+||+|+||+++|+|......  .........|+++  +.+|+|+|+.+
T Consensus       153 ~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~r--~~~p~~va~~~  228 (253)
T PRK05867        153 NVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE--YQPLWEPKIPLGR--LGRPEELAGLY  228 (253)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH--HHHHHHhcCCCCC--CcCHHHHHHHH
Confidence                           7899999999999999999999999999998764321  1111112234455  78999999999


Q ss_pred             HHHhcCCCccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .||+ ++...++||+.+..++
T Consensus       229 ~~L~-s~~~~~~tG~~i~vdg  248 (253)
T PRK05867        229 LYLA-SEASSYMTGSDIVIDG  248 (253)
T ss_pred             HHHc-CcccCCcCCCeEEECC
Confidence            9996 5567899999994443

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.2e-30  Score=216.21  Aligned_cols=195  Identities=19%  Similarity=0.188  Sum_probs=153.8

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh----------hHHHHHHHHHHHhhhhhcccCCCCCeEEEE
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV----------EKAETTASEIRKHFEVATSEDKKPGEVLIK   78 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~----------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   78 (222)
                      |.+|++|+++||||++|||+++|++|++.|++|++++|+.          +.++++.+.++.          .+.++.++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~----------~~~~~~~~   72 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA----------AGGRGIAV   72 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHh----------cCCceEEE
Confidence            4568899999999999999999999999999999999984          455566666644          24578889


Q ss_pred             ecCCCChhhHHHHHHHHHhhccceeEEEech-hhH------H-hh-------------h---------------------
Q psy7936          79 KLDLASFKSIRDCAQDINQTEANVHILINNA-VYC------I-LS-------------N---------------------  116 (222)
Q Consensus        79 ~~D~~~~~~v~~~~~~i~~~~~~id~li~~a-g~~------~-l~-------------~---------------------  116 (222)
                      +||+++.++++++++++.+.++++|++|||| |..      . +.             |                     
T Consensus        73 ~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g  152 (305)
T PRK08303         73 QVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGG  152 (305)
T ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCc
Confidence            9999999999999999999999999999999 741      1 00             0                     


Q ss_pred             -----------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC---CCCCcchhhhHH
Q psy7936         117 -----------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD---DTYFPGARTLGR  164 (222)
Q Consensus       117 -----------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~~  164 (222)
                                                   +.+|+++|+.|++++||+||+|+||+++|+|.....   +..+.... ...
T Consensus       153 ~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~  231 (305)
T PRK08303        153 LVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDAL-AKE  231 (305)
T ss_pred             EEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhh-ccc
Confidence                                         789999999999999999999999999999864321   11111111 122


Q ss_pred             HH-HHHhcCChHHHHHHHHHHhcCCCcccccccccccccccccCCCcccccCC
Q psy7936         165 VL-MWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFPFELKGK  216 (222)
Q Consensus       165 ~~-~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~  216 (222)
                      |. .+  ..+|+|+|..++||++++...++||+++.+..+..+..+..+...+
T Consensus       232 p~~~~--~~~peevA~~v~fL~s~~~~~~itG~~l~~~~~~~~~~~~~~~~~~  282 (305)
T PRK08303        232 PHFAI--SETPRYVGRAVAALAADPDVARWNGQSLSSGQLARVYGFTDLDGSR  282 (305)
T ss_pred             ccccc--CCCHHHHHHHHHHHHcCcchhhcCCcEEEhHHHHHhcCccCCCCCC
Confidence            32 23  5689999999999986654568999999999888888887765443

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=3.8e-30  Score=212.41  Aligned_cols=195  Identities=15%  Similarity=0.111  Sum_probs=147.4

Q ss_pred             CCCCEEEEecCCC--chHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |++|++|||||++  |||+++|++|++.|++|++++|+.+..+++ +.+...         .+ ...++++|+++.++++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~-~~~~~~---------~g-~~~~~~~Dv~d~~~v~   73 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRV-KPLAES---------LG-SDFVLPCDVEDIASVD   73 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHH-HHHHHh---------cC-CceEEeCCCCCHHHHH
Confidence            6799999999996  999999999999999999999986543333 333222         12 2357899999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-------hh-------------h---------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-------LS-------------N---------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-------l~-------------~---------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+..       +.             |                                 
T Consensus        74 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~  153 (271)
T PRK06505         74 AVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM  153 (271)
T ss_pred             HHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccC
Confidence            999999999999999999999641       00             0                                 


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-CcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..|+++|+.|++++||+||+|+||+++|+|........ .........|+++  ..+|+|+|+.++|
T Consensus       154 ~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~peeva~~~~f  231 (271)
T PRK06505        154 PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRR--TVTIDEVGGSALY  231 (271)
T ss_pred             CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccc--cCCHHHHHHHHHH
Confidence                        899999999999999999999999999999865432110 0111112235555  7899999999999


Q ss_pred             HhcCCCcccccccccc-ccccc-ccCCCcccccCCCCCC
Q psy7936         184 CALDEGAAKETGLYYS-DYKVA-KSRNFPFELKGKGKST  220 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~-~~~~~-~~~~~~~~~~~~~~~~  220 (222)
                      |+ ++...++||+.+. +++.. ...+.++..+.|++.+
T Consensus       232 L~-s~~~~~itG~~i~vdgG~~~~~~~~~~~~~~~~~~~  269 (271)
T PRK06505        232 LL-SDLSSGVTGEIHFVDSGYNIVSMPTLEELKSSDEER  269 (271)
T ss_pred             Hh-CccccccCceEEeecCCcccCCcchHHHHHHhHHhc
Confidence            96 4567899999994 44443 2345566666666543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.5e-29  Score=206.64  Aligned_cols=175  Identities=20%  Similarity=0.145  Sum_probs=138.6

Q ss_pred             CCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |++|+++||||+  +|||+++|++|++.|++|++++|+. ...+..+++.            ..++.+++||+++.++++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~------------~~~~~~~~~Dl~~~~~v~   71 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV------------DEEDLLVECDVASDESIE   71 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc------------cCceeEEeCCCCCHHHHH
Confidence            679999999999  7999999999999999999999984 3333333321            236788999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh-------h-------------h---------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL-------S-------------N---------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l-------~-------------~---------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+...       .             |                                 
T Consensus        72 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~  151 (252)
T PRK06079         72 RAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI  151 (252)
T ss_pred             HHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC
Confidence            9999999999999999999997420       0             0                                 


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..|+++|+.|++++||+||+|+||+|+|+|....... +.........|.++  +.+|+|+|+.+.|
T Consensus       152 ~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedva~~~~~  229 (252)
T PRK06079        152 PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGV--GVTIEEVGNTAAF  229 (252)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccC--CCCHHHHHHHHHH
Confidence                        89999999999999999999999999999987543221 11111112234455  7899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+ ++...+++|+.+..++
T Consensus       230 l~-s~~~~~itG~~i~vdg  247 (252)
T PRK06079        230 LL-SDLSTGVTGDIIYVDK  247 (252)
T ss_pred             Hh-CcccccccccEEEeCC
Confidence            96 5567899999995443

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=2.1e-29  Score=208.31  Aligned_cols=190  Identities=13%  Similarity=0.114  Sum_probs=143.4

Q ss_pred             CCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          11 RLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        11 ~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .|++|++|||||+  +|||+++|+.|++.|++|++++|+.+. .+..+.+....         +.. .++++|++|.+++
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~~~~~~~---------~~~-~~~~~Dv~d~~~v   70 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVEPIAQEL---------GSD-YVYELDVSKPEHF   70 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHHHHHHhc---------CCc-eEEEecCCCHHHH
Confidence            4679999999997  899999999999999999999998642 22333333221         223 5789999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH-------h-------------hh--------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI-------L-------------SN--------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~-------l-------------~~--------------------------------  116 (222)
                      +++++.+.+.++++|++|||||+..       +             +|                                
T Consensus        71 ~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~  150 (274)
T PRK08415         71 KSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY  150 (274)
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC
Confidence            9999999999999999999999741       0             00                                


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC-cchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF-PGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                   +.+|+++|+.|++++||+||+|+||+++|+|......... ........|+++  +.+|+|+|+.+.
T Consensus       151 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r--~~~pedva~~v~  228 (274)
T PRK08415        151 VPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKK--NVSIEEVGNSGM  228 (274)
T ss_pred             CCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhc--cCCHHHHHHHHH
Confidence                         8999999999999999999999999999988654321110 011112235666  789999999999


Q ss_pred             HHhcCCCcccccccccccccccccCCCccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYKVAKSRNFPFELK  214 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~  214 (222)
                      ||++ +...++||+.+..++......++.-.+
T Consensus       229 fL~s-~~~~~itG~~i~vdGG~~~~~~~~~~~  259 (274)
T PRK08415        229 YLLS-DLSSGVTGEIHYVDAGYNIMGMGAVEK  259 (274)
T ss_pred             HHhh-hhhhcccccEEEEcCcccccCCCcccc
Confidence            9964 457899999995544444455554333

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.97  E-value=6.6e-29  Score=201.01  Aligned_cols=169  Identities=25%  Similarity=0.328  Sum_probs=143.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+.++++||||||+|||+++|++|+++|++|++++|+.+++.++.++++..         .+..+.++.+|+++.+++.+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~---------~~v~v~vi~~DLs~~~~~~~   73 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK---------TGVEVEVIPADLSDPEALER   73 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh---------hCceEEEEECcCCChhHHHH
Confidence            457899999999999999999999999999999999999999999999987         36789999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh-------------------------h-----------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS-------------------------N-----------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~-------------------------~-----------------------------  116 (222)
                      +.+++.+....||+||||||+....                         .                             
T Consensus        74 l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~  153 (265)
T COG0300          74 LEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYM  153 (265)
T ss_pred             HHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcch
Confidence            9999999888999999999988700                         0                             


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..|+++|..|+.+.||+|.+|+||++.|++.. ...... .   ...+...  +.+|+++|+.+++.+..
T Consensus       154 avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~~~~~~-~---~~~~~~~--~~~~~~va~~~~~~l~~  226 (265)
T COG0300         154 AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-AKGSDV-Y---LLSPGEL--VLSPEDVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-cccccc-c---cccchhh--ccCHHHHHHHHHHHHhc
Confidence                     899999999999999999999999999999997 211100 0   1112222  78999999999999766


Q ss_pred             CCcccccc
Q psy7936         188 EGAAKETG  195 (222)
Q Consensus       188 ~~~~~~~G  195 (222)
                      .+...+.|
T Consensus       227 ~k~~ii~~  234 (265)
T COG0300         227 GKREIIPG  234 (265)
T ss_pred             CCceEecC
Confidence            66555556

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.1e-29  Score=206.20  Aligned_cols=183  Identities=23%  Similarity=0.244  Sum_probs=148.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+....        .+.++.++++|+++.+++.
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~   74 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV--------AGARVLAVPADVTDAASVA   74 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc--------CCceEEEEEccCCCHHHHH
Confidence            34789999999999999999999999999999999999998888888876521        2457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||....                +|                                     
T Consensus        75 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (260)
T PRK07063         75 AAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG  154 (260)
T ss_pred             HHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC
Confidence            9999999999999999999996420                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CC----cchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YF----PGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                +..++++++.+++++||+||+|+||+++|+|....... ..    ........|+++  +.+|+|+|..+
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~va~~~  232 (260)
T PRK07063        155 CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKR--IGRPEEVAMTA  232 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCC--CCCHHHHHHHH
Confidence                      78999999999999999999999999999987643211 00    011112234444  78999999999


Q ss_pred             HHHhcCCCcccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +||+ ++...++||+.+..++.
T Consensus       233 ~fl~-s~~~~~itG~~i~vdgg  253 (260)
T PRK07063        233 VFLA-SDEAPFINATCITIDGG  253 (260)
T ss_pred             HHHc-CccccccCCcEEEECCC
Confidence            9996 55678999999954443

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=2.6e-29  Score=206.25  Aligned_cols=180  Identities=17%  Similarity=0.098  Sum_probs=139.9

Q ss_pred             CCCCCEEEEecC--CCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          11 RLDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        11 ~~~~k~~lVtGa--s~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .|++|+++||||  ++|||+++|+.|+++|++|++++|+. +..+..+++...          .+....++||+++.+++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v   71 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAE----------LDSELVFRCDVASDDEI   71 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhc----------cCCceEEECCCCCHHHH
Confidence            478999999997  67999999999999999999998864 333444444332          12346789999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH--------hh-------------h-------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI--------LS-------------N-------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~--------l~-------------~-------------------------------  116 (222)
                      .++++.+.+.++++|++|||||+..        +.             |                               
T Consensus        72 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~  151 (261)
T PRK08690         72 NQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAV  151 (261)
T ss_pred             HHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccc
Confidence            9999999999999999999999752        00             0                               


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                     +..+++.++.+++++||+||+|+||+++|+|....... +.........|+++  +.+|+|+|+.
T Consensus       152 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~peevA~~  229 (261)
T PRK08690        152 RAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRR--NVTIEEVGNT  229 (261)
T ss_pred             cCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCC--CCCHHHHHHH
Confidence                           78999999999999999999999999999987654211 11111112235555  7899999999


Q ss_pred             HHHHhcCCCccccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~~~  204 (222)
                      +.||+ ++...++||+.+..++..
T Consensus       230 v~~l~-s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        230 AAFLL-SDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHh-CcccCCcceeEEEEcCCc
Confidence            99996 555789999999555443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.96  E-value=3e-29  Score=204.66  Aligned_cols=179  Identities=23%  Similarity=0.214  Sum_probs=142.0

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ++++++|+++||||++|||+++|++|+++|++|++++|+..  ++..+.++.          .+.++.++++|+++.+++
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~----------~~~~~~~~~~Dl~~~~~~   70 (251)
T PRK12481          3 LFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEA----------LGRKFHFITADLIQQKDI   70 (251)
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHH----------cCCeEEEEEeCCCCHHHH
Confidence            34678999999999999999999999999999999998643  333344433          245788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      +++++++.+.++++|++|||||+...                +|                                    
T Consensus        71 ~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~  150 (251)
T PRK12481         71 DSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG  150 (251)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC
Confidence            99999999999999999999997540                00                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-CcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..+++.++.+++++||+||+|+||+++|+|........ .........|.++  +.+|+|+|+.+.|
T Consensus       151 ~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~--~~~peeva~~~~~  228 (251)
T PRK12481        151 IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASR--WGTPDDLAGPAIF  228 (251)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                        899999999999999999999999999999876543211 1111112234444  7899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+ ++...+++|+.+..++
T Consensus       229 L~-s~~~~~~~G~~i~vdg  246 (251)
T PRK12481        229 LS-SSASDYVTGYTLAVDG  246 (251)
T ss_pred             Hh-CccccCcCCceEEECC
Confidence            96 5567899999994443

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.5e-29  Score=203.78  Aligned_cols=181  Identities=18%  Similarity=0.165  Sum_probs=145.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh-HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+.++++|+++|||+++|||+++|++|++.|++|++++|+.+ .++++.+.+...          +.++.++++|+++++
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~   71 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA----------GRRAIQIAADVTSKA   71 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc----------CCceEEEEcCCCCHH
Confidence            456788999999999999999999999999999999999764 456666666543          457888999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------  116 (222)
                      +++++++.+.+.++++|++|||||....                +|                                  
T Consensus        72 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  151 (254)
T PRK06114         72 DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIV  151 (254)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCC
Confidence            9999999999999999999999997430                00                                  


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                     +..++++++.++.++||+||+|+||+++|+|.......+.........|+++  +.+|+|+|..+
T Consensus       152 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r--~~~~~dva~~~  229 (254)
T PRK06114        152 NRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQR--MAKVDEMVGPA  229 (254)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCC--CcCHHHHHHHH
Confidence                           6778999999999999999999999999998753211111111112335555  78999999999


Q ss_pred             HHHhcCCCcccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~  201 (222)
                      +||+ ++...++||+.+..+
T Consensus       230 ~~l~-s~~~~~~tG~~i~~d  248 (254)
T PRK06114        230 VFLL-SDAASFCTGVDLLVD  248 (254)
T ss_pred             HHHc-CccccCcCCceEEEC
Confidence            9996 556789999999433

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.96  E-value=9.2e-29  Score=195.40  Aligned_cols=170  Identities=28%  Similarity=0.328  Sum_probs=140.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|+++|||||||||.++|+.|++.|++|++++|+.++++++..++.+            +.++++.+|++|.+++.
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~------------~~~~~~~~DVtD~~~~~   69 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA------------GAALALALDVTDRAAVE   69 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc------------CceEEEeeccCCHHHHH
Confidence            345789999999999999999999999999999999999999999988742            47889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhh----------------h-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILS----------------N-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~----------------~-------------------------------------  116 (222)
                      .+++.+.+.++++|+||||||.....                |                                     
T Consensus        70 ~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~  149 (246)
T COG4221          70 AAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPG  149 (246)
T ss_pred             HHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCC
Confidence            99999999999999999999988711                0                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..|++.|..++..++|||.+|+||.+.|......+........  ..........+|+|+|+.+.|.+.
T Consensus       150 ~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~--~~~y~~~~~l~p~dIA~~V~~~~~  227 (246)
T COG4221         150 GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERA--DKVYKGGTALTPEDIAEAVLFAAT  227 (246)
T ss_pred             CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhH--HHHhccCCCCCHHHHHHHHHHHHh
Confidence                      89999999999999999999999999977766655432111111  111111226899999999999988


Q ss_pred             CCCcccc
Q psy7936         187 DEGAAKE  193 (222)
Q Consensus       187 ~~~~~~~  193 (222)
                      .|..-.+
T Consensus       228 ~P~~vnI  234 (246)
T COG4221         228 QPQHVNI  234 (246)
T ss_pred             CCCcccc
Confidence            8754333

>KOG1208|consensus

Probab=99.96  E-value=6.6e-29  Score=207.28  Aligned_cols=196  Identities=34%  Similarity=0.517  Sum_probs=165.2

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           6 AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      ..+..++++++++|||+++|||+++|++|+.+|++|++.+|+.+..++..+.|.+..        +..++.+++||+++.
T Consensus        27 ~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~--------~~~~i~~~~lDLssl   98 (314)
T KOG1208|consen   27 VTHGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGK--------ANQKIRVIQLDLSSL   98 (314)
T ss_pred             eeccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC--------CCCceEEEECCCCCH
Confidence            456678899999999999999999999999999999999999999999999998743        577899999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH-----------------------hhh--------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI-----------------------LSN--------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~-----------------------l~~--------------------------  116 (222)
                      ++|+++++++.+.+.++|++|||||++.                       +++                          
T Consensus        99 ~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~  178 (314)
T KOG1208|consen   99 KSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKI  178 (314)
T ss_pred             HHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCcc
Confidence            9999999999999999999999999988                       110                          


Q ss_pred             -------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCC-cCCCCCCCCCcchhhhHHHHHHHh
Q psy7936         117 -------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTE-LGRYMDDTYFPGARTLGRVLMWWW  170 (222)
Q Consensus       117 -------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~  170 (222)
                                               +..+++.|++++.+ ||.+++++||.+.|+ +.+ ..   +.... ...++.+..
T Consensus       179 ~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~~---~~~~~-l~~~l~~~~  252 (314)
T KOG1208|consen  179 DLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-VN---LLLRL-LAKKLSWPL  252 (314)
T ss_pred             chhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-ch---HHHHH-HHHHHHHHh
Confidence                                     67788899999887 999999999999999 555 11   11111 233344444


Q ss_pred             cCChHHHHHHHHHHhcCCCcccccccccccccccccCCCcccccC
Q psy7936         171 MKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFPFELKG  215 (222)
Q Consensus       171 ~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~  215 (222)
                      ..+|++.|++.+|++++++-+..+|.|+.++....+++...+.+.
T Consensus       253 ~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d~~~~~~~~~a~d~~~  297 (314)
T KOG1208|consen  253 TKSPEQGAATTCYAALSPELEGVSGKYFEDCAIAEPSEEALDEEL  297 (314)
T ss_pred             ccCHHHHhhheehhccCccccCccccccccccccccccccCCHHH
Confidence            679999999999999999999999999999988888666555443

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.7e-29  Score=203.00  Aligned_cols=180  Identities=28%  Similarity=0.284  Sum_probs=146.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +.+++|+++||||++|||+++++.|++.|++|++++|+.++++++.+.++..          +.++.++.+|+++.+++.
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~   71 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE----------GGEAVALAGDVRDEAYAK   71 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHHH
Confidence            4578899999999999999999999999999999999999888888777653          457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----h-------------hh------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----L-------------SN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----l-------------~~------------------------------------  116 (222)
                      ++++++.+.++++|++|||||...    +             +|                                    
T Consensus        72 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~  151 (254)
T PRK07478         72 ALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF  151 (254)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC
Confidence            999999999999999999999742    0             00                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc-chhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP-GARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..++++++.++.++||+||+|+||+++|+|.......+.. .......++++  +.+|+|+|+.++|
T Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~~  229 (254)
T PRK07478        152 PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKR--MAQPEEIAQAALF  229 (254)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                        78899999999999999999999999999987654321111 11111123334  6799999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+ ++...+++|+.+..++
T Consensus       230 l~-s~~~~~~~G~~~~~dg  247 (254)
T PRK07478        230 LA-SDAASFVTGTALLVDG  247 (254)
T ss_pred             Hc-CchhcCCCCCeEEeCC
Confidence            96 4456799999985443

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=6e-29  Score=203.76  Aligned_cols=181  Identities=15%  Similarity=0.123  Sum_probs=139.3

Q ss_pred             CCCCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           8 SASRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      +..++++|++|||||+  +|||+++|++|+++|++|++++|+.+..+. .+++...          ...+.+++||+++.
T Consensus         4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~-~~~~~~~----------~~~~~~~~~D~~~~   72 (258)
T PRK07533          4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPY-VEPLAEE----------LDAPIFLPLDVREP   72 (258)
T ss_pred             cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHH-HHHHHHh----------hccceEEecCcCCH
Confidence            4566889999999999  599999999999999999999998654322 2233222          11346789999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHHh--------------------hh-----------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCIL--------------------SN-----------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~l--------------------~~-----------------------------  116 (222)
                      ++++++++.+.+.++++|++|||||....                    +|                             
T Consensus        73 ~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~  152 (258)
T PRK07533         73 GQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGA  152 (258)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence            99999999999999999999999997420                    00                             


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                      +..|+++|+.|++++||+||+|+||+++|+|....... ..........|.++  ..+|+|+|.
T Consensus       153 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dva~  230 (258)
T PRK07533        153 EKVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRR--LVDIDDVGA  230 (258)
T ss_pred             ccCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCC--CCCHHHHHH
Confidence                            78999999999999999999999999999997654211 11111112234444  789999999


Q ss_pred             HHHHHhcCCCccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .++||+ ++...+++|+.+..++
T Consensus       231 ~~~~L~-s~~~~~itG~~i~vdg  252 (258)
T PRK07533        231 VAAFLA-SDAARRLTGNTLYIDG  252 (258)
T ss_pred             HHHHHh-ChhhccccCcEEeeCC
Confidence            999996 4457899999994433

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=9e-29  Score=202.95  Aligned_cols=179  Identities=19%  Similarity=0.137  Sum_probs=138.3

Q ss_pred             CCCCCCEEEEecCCC--chHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          10 SRLDGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ..|++|+++||||++  |||+++|+.|+++|++|++++|+. ..++..+++....         + ...++++|+++.++
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~---------g-~~~~~~~Dv~~~~~   72 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI---------G-CNFVSELDVTNPKS   72 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc---------C-CceEEEccCCCHHH
Confidence            346899999999997  999999999999999999999884 3344444444321         2 22467899999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH--------------------hhh-------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI--------------------LSN-------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~--------------------l~~-------------------------------  116 (222)
                      ++++++.+.+.++++|++|||||...                    -+|                               
T Consensus        73 v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~  152 (260)
T PRK06603         73 ISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK  152 (260)
T ss_pred             HHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc
Confidence            99999999999999999999999631                    000                               


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                    +..|+++|+.|++++||+||+|+||+++|+|....... +.........|+++  +.+|+|+|+.+
T Consensus       153 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedva~~~  230 (260)
T PRK06603        153 VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKR--NTTQEDVGGAA  230 (260)
T ss_pred             CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCC--CCCHHHHHHHH
Confidence                          89999999999999999999999999999986543211 11111112235555  78999999999


Q ss_pred             HHHhcCCCccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .||+ ++...++||+.+..++
T Consensus       231 ~~L~-s~~~~~itG~~i~vdg  250 (260)
T PRK06603        231 VYLF-SELSKGVTGEIHYVDC  250 (260)
T ss_pred             HHHh-CcccccCcceEEEeCC
Confidence            9996 5567899999994433

>PRK08589 short chain dehydrogenase; Validated

Probab=99.96  E-value=9.8e-29  Score=203.91  Aligned_cols=180  Identities=24%  Similarity=0.266  Sum_probs=145.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|++|||||++|||+++++.|+++|++|++++|+ +.++++.+.++..          +.++.++++|+++.+++.
T Consensus         2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~   70 (272)
T PRK08589          2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN----------GGKAKAYHVDISDEQQVK   70 (272)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc----------CCeEEEEEeecCCHHHHH
Confidence            34789999999999999999999999999999999999 7777777777542          557889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh-----------------hh------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL-----------------SN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l-----------------~~------------------------------------  116 (222)
                      .+++.+.+.++++|++|||||....                 +|                                    
T Consensus        71 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  150 (272)
T PRK08589         71 DFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLY  150 (272)
T ss_pred             HHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCC
Confidence            9999999999999999999987530                 00                                    


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC-------cchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF-------PGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                +..++++++.+++++||+||+|+||+++|+|.........       ........|+++  +.+|+|+|+
T Consensus       151 ~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~  228 (272)
T PRK08589        151 RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGR--LGKPEEVAK  228 (272)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCC--CcCHHHHHH
Confidence                      7899999999999999999999999999998765432110       000001123444  679999999


Q ss_pred             HHHHHhcCCCcccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      .+.||+ ++...+++|+.+..++.
T Consensus       229 ~~~~l~-s~~~~~~~G~~i~vdgg  251 (272)
T PRK08589        229 LVVFLA-SDDSSFITGETIRIDGG  251 (272)
T ss_pred             HHHHHc-CchhcCcCCCEEEECCC
Confidence            999996 44568999999954433

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.96  E-value=1.1e-28  Score=202.17  Aligned_cols=180  Identities=19%  Similarity=0.128  Sum_probs=140.1

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChh--HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936          10 SRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVE--KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus        10 ~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      +++++|+++||||+  +|||+++|++|++.|++|++++|+.+  +.++..+++...          ..++.++++|+++.
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~d~   71 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP----------LNPSLFLPCDVQDD   71 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc----------cCcceEeecCcCCH
Confidence            45789999999986  89999999999999999999876543  334444445432          23567889999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH-------hh-------------h-----------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI-------LS-------------N-----------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~-------l~-------------~-----------------------------  116 (222)
                      ++++++++.+.+.++++|++|||||+..       +.             |                             
T Consensus        72 ~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~  151 (258)
T PRK07370         72 AQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG  151 (258)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence            9999999999999999999999999741       00             0                             


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC-CCCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD-TYFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                      +..++++|+.|++++||+||+|+||+++|+|...... ...........|+++  +.+|+|+|.
T Consensus       152 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~~~dva~  229 (258)
T PRK07370        152 VRAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRR--TVTQTEVGN  229 (258)
T ss_pred             ccCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCc--CCCHHHHHH
Confidence                            7999999999999999999999999999998754321 111111112235555  789999999


Q ss_pred             HHHHHhcCCCccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .+.||+ ++...+++|+.+..++
T Consensus       230 ~~~fl~-s~~~~~~tG~~i~vdg  251 (258)
T PRK07370        230 TAAFLL-SDLASGITGQTIYVDA  251 (258)
T ss_pred             HHHHHh-ChhhccccCcEEEECC
Confidence            999996 5567899999984443

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.96  E-value=9.7e-29  Score=202.54  Aligned_cols=182  Identities=20%  Similarity=0.214  Sum_probs=144.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +.+|++|+++||||++|||+++|+.|++.|++|++++| +.+.++++.+.++..         .+.++.++++|++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~   73 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK---------YGIKAKAYPLNILEPET   73 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh---------cCCceEEEEcCCCCHHH
Confidence            35678999999999999999999999999999998865 567777777776543         25688999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH---------h-------------hh-----------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI---------L-------------SN-----------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~---------l-------------~~-----------------------------  116 (222)
                      ++++++.+.+.++++|++|||||...         +             +|                             
T Consensus        74 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~  153 (260)
T PRK08416         74 YKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSST  153 (260)
T ss_pred             HHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecc
Confidence            99999999999999999999997531         0             00                             


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC-cchhhhHHHHHHHhcCChHHH
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF-PGARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~e~  177 (222)
                                        +..++++|+.+++++||+||+|+||+++|+|.......+. ........|+++  +.+|+|+
T Consensus       154 ~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r--~~~p~~v  231 (260)
T PRK08416        154 GNLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNR--MGQPEDL  231 (260)
T ss_pred             ccccCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCC--CCCHHHH
Confidence                              8899999999999999999999999999998765432111 111111224444  7899999


Q ss_pred             HHHHHHHhcCCCccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      |..++||+ ++...+++|+.+..++
T Consensus       232 a~~~~~l~-~~~~~~~~G~~i~vdg  255 (260)
T PRK08416        232 AGACLFLC-SEKASWLTGQTIVVDG  255 (260)
T ss_pred             HHHHHHHc-ChhhhcccCcEEEEcC
Confidence            99999996 5557899999984433

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-28  Score=202.54  Aligned_cols=182  Identities=22%  Similarity=0.262  Sum_probs=147.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+++++..+.+....        ++.++.++.+|+++.+++.
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~v~   75 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF--------PGARLLAARCDVLDEADVA   75 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhC--------CCceEEEEEecCCCHHHHH
Confidence            46789999999999999999999999999999999999998888887776542        3457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||....                +|                                     
T Consensus        76 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  155 (265)
T PRK07062         76 AFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPH  155 (265)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCC
Confidence            9999999999999999999996420                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC-----CCCcchh------hhHHHHHHHhcCChH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD-----TYFPGAR------TLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~p~  175 (222)
                                +..++++++.++.++||+||+|+||+++|++......     .......      ....|+++  +.+|+
T Consensus       156 ~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~  233 (265)
T PRK07062        156 MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGR--LGRPD  233 (265)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCC--CCCHH
Confidence                      7889999999999999999999999999998653211     0101110      01234445  78999


Q ss_pred             HHHHHHHHHhcCCCccccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+|+.+.||+ ++...++||+.+..++
T Consensus       234 ~va~~~~~L~-s~~~~~~tG~~i~vdg  259 (265)
T PRK07062        234 EAARALFFLA-SPLSSYTTGSHIDVSG  259 (265)
T ss_pred             HHHHHHHHHh-CchhcccccceEEEcC
Confidence            9999999996 5567899999995443

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=1.3e-28  Score=202.30  Aligned_cols=177  Identities=16%  Similarity=0.143  Sum_probs=138.4

Q ss_pred             CCCCEEEEecCCC--chHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |++|+++||||++  |||+++|+.|++.|++|++++|+ +.+++..+++...          ...+.+++||+++.++++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~v~   72 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQ----------LGSDIVLPCDVAEDASID   72 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhc----------cCCceEeecCCCCHHHHH
Confidence            6799999999996  99999999999999999999998 3444455555442          234568899999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH--------hh-------------h--------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI--------LS-------------N--------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~--------l~-------------~--------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+..        +.             |                                
T Consensus        73 ~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~  152 (262)
T PRK07984         73 AMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA  152 (262)
T ss_pred             HHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC
Confidence            999999999999999999998632        00             0                                


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                   +.+|+++++.|++++||+||+|+||+++|+|....... ..........|.++  +.+|+|+|..+.
T Consensus       153 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedva~~~~  230 (262)
T PRK07984        153 IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR--TVTIEDVGNSAA  230 (262)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcC--CCCHHHHHHHHH
Confidence                         89999999999999999999999999999876433211 01111111234445  789999999999


Q ss_pred             HHhcCCCccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ||+ ++...+++|+.+..++
T Consensus       231 ~L~-s~~~~~itG~~i~vdg  249 (262)
T PRK07984        231 FLC-SDLSAGISGEVVHVDG  249 (262)
T ss_pred             HHc-CcccccccCcEEEECC
Confidence            996 5557899999995444

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=1.2e-28  Score=201.95  Aligned_cols=178  Identities=17%  Similarity=0.149  Sum_probs=138.6

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCCh---hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936          10 SRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDV---EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus        10 ~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      .++++|+++||||+  +|||+++|++|++.|++|++++|+.   +.++++.+++            .+.++.++++|++|
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~d   70 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL------------EGQESLLLPCDVTS   70 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc------------CCCceEEEecCCCC
Confidence            45789999999997  8999999999999999999998764   3333333222            23578899999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHHh-------h-------------h----------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCIL-------S-------------N----------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~l-------~-------------~----------------------------  116 (222)
                      .+++.++++.+.+.++++|++|||||+...       .             |                            
T Consensus        71 ~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~  150 (257)
T PRK08594         71 DEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG  150 (257)
T ss_pred             HHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence            999999999999999999999999986410       0             0                            


Q ss_pred             -----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 -----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 -----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                                       +..|+++++.|++++||+||+|+||+++|++....... ..........|+++  +.+|+|+|
T Consensus       151 ~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~~va  228 (257)
T PRK08594        151 GERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRR--TTTQEEVG  228 (257)
T ss_pred             CccCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccc--cCCHHHHH
Confidence                             88999999999999999999999999999976533211 11111111224445  78999999


Q ss_pred             HHHHHHhcCCCccccccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.++||+ ++...+++|+.+..++
T Consensus       229 ~~~~~l~-s~~~~~~tG~~~~~dg  251 (257)
T PRK08594        229 DTAAFLF-SDLSRGVTGENIHVDS  251 (257)
T ss_pred             HHHHHHc-CcccccccceEEEECC
Confidence            9999996 5567899999995443

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=3.7e-28  Score=198.23  Aligned_cols=181  Identities=19%  Similarity=0.241  Sum_probs=148.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ++.+.+|++|||||++|||++++++|+++|++|++++|+.+.++++.++++..          +.++.++.+|+++.+++
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~~~~~~   73 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE----------GIKAHAAPFNVTHKQEV   73 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc----------CCeEEEEecCCCCHHHH
Confidence            35678999999999999999999999999999999999999888888777653          45788899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      .++++.+.+.++++|++|||+|....                +|                                    
T Consensus        74 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~  153 (254)
T PRK08085         74 EAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRD  153 (254)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCC
Confidence            99999999999999999999986420                00                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                 +..++++++.+++++||+||+|+||+++|++....... ..........|+.+  ..+|+|+|+.+.||
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~va~~~~~l  231 (254)
T PRK08085        154 TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAAR--WGDPQELIGAAVFL  231 (254)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                       78899999999999999999999999999987654321 11122212334555  78999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      + ++.+.++||+.+..++
T Consensus       232 ~-~~~~~~i~G~~i~~dg  248 (254)
T PRK08085        232 S-SKASDFVNGHLLFVDG  248 (254)
T ss_pred             h-CccccCCcCCEEEECC
Confidence            6 5567899999995443

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=4.7e-28  Score=200.03  Aligned_cols=178  Identities=15%  Similarity=0.094  Sum_probs=136.9

Q ss_pred             CCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |.+|++|||||+  +|||+++|+.|+++|++|++++|+... .+..+.+.+..         + ....+++|+++.++++
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~~l~~~~---------~-~~~~~~~Dl~~~~~v~   76 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVEPLAAEL---------G-AFVAGHCDVTDEASID   76 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHHHHhc---------C-CceEEecCCCCHHHHH
Confidence            578999999997  899999999999999999999987432 22233333221         1 3457899999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh--------------------hh---------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL--------------------SN---------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l--------------------~~---------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+...                    +|                                 
T Consensus        77 ~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~  156 (272)
T PRK08159         77 AVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM  156 (272)
T ss_pred             HHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC
Confidence            9999999999999999999997520                    00                                 


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc-chhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP-GARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..|+++|+.|++++||+||+|+||+++|+|.......... .......|+++  ..+|||+|+.++|
T Consensus       157 p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~peevA~~~~~  234 (272)
T PRK08159        157 PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRR--TVTIEEVGDSALY  234 (272)
T ss_pred             CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccc--cCCHHHHHHHHHH
Confidence                        89999999999999999999999999999986543211111 11111245555  7899999999999


Q ss_pred             HhcCCCcccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+ ++...++||+.+..++.
T Consensus       235 L~-s~~~~~itG~~i~vdgG  253 (272)
T PRK08159        235 LL-SDLSRGVTGEVHHVDSG  253 (272)
T ss_pred             Hh-CccccCccceEEEECCC
Confidence            96 55678999999954443

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=3.3e-28  Score=199.19  Aligned_cols=178  Identities=16%  Similarity=0.178  Sum_probs=138.2

Q ss_pred             CCCCCCEEEEecC--CCchHHHHHHHHHhCCCEEEEEeCCh--hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936          10 SRLDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDV--EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus        10 ~~~~~k~~lVtGa--s~giG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      ..+++|+++||||  ++|||+++|++|++.|++|++++|+.  +.++++.+.+             +.++.++++|+++.
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~   69 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-------------PEPAPVLELDVTNE   69 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-------------CCCCcEEeCCCCCH
Confidence            4478999999999  89999999999999999999999864  3344433322             22567899999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHHh--------------------hh-----------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCIL--------------------SN-----------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~l--------------------~~-----------------------------  116 (222)
                      ++++++++.+.+.++++|++|||||+...                    +|                             
T Consensus        70 ~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~  149 (256)
T PRK07889         70 EHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT  149 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc
Confidence            99999999999999999999999998520                    00                             


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                     +..|+++|+.|++++||+||+|+||+++|+|....... ..........|+++ ++.+|+|+|+.
T Consensus       150 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~-~~~~p~evA~~  228 (256)
T PRK07889        150 VAWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGW-DVKDPTPVARA  228 (256)
T ss_pred             ccCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcccc-ccCCHHHHHHH
Confidence                           78999999999999999999999999999987654321 11111111234431 16799999999


Q ss_pred             HHHHhcCCCccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ++||+ ++...+++|+++..++
T Consensus       229 v~~l~-s~~~~~~tG~~i~vdg  249 (256)
T PRK07889        229 VVALL-SDWFPATTGEIVHVDG  249 (256)
T ss_pred             HHHHh-CcccccccceEEEEcC
Confidence            99996 4456799999995443

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.8e-27  Score=195.21  Aligned_cols=178  Identities=21%  Similarity=0.209  Sum_probs=142.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      |.++++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+             +.++.++++|+++.+++
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~   67 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-------------GERARFIATDITDDAAI   67 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------CCeeEEEEecCCCHHHH
Confidence            34578999999999999999999999999999999999988776665443             34688999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH--------------------------------hhh--------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI--------------------------------LSN--------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~--------------------------------l~~--------------------  116 (222)
                      .++++.+.+.++++|++|||||...                                +.+                    
T Consensus        68 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~  147 (261)
T PRK08265         68 ERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGR  147 (261)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC
Confidence            9999999999999999999999642                                000                    


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc--chh-hhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP--GAR-TLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                               +..+++.++.++.++||+||+|+||+++|+|..........  ... ....|+++  +.+|+|+|+.+.||
T Consensus       148 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dva~~~~~l  225 (261)
T PRK08265        148 WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGR--VGDPEEVAQVVAFL  225 (261)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCC--ccCHHHHHHHHHHH
Confidence                     68899999999999999999999999999987654321110  000 01224445  78999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      + ++...+++|+.+..++
T Consensus       226 ~-s~~~~~~tG~~i~vdg  242 (261)
T PRK08265        226 C-SDAASFVTGADYAVDG  242 (261)
T ss_pred             c-CccccCccCcEEEECC
Confidence            6 5557899999994433

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=1.2e-27  Score=196.35  Aligned_cols=178  Identities=19%  Similarity=0.083  Sum_probs=134.7

Q ss_pred             CCCCCEEEEecC--CCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          11 RLDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        11 ~~~~k~~lVtGa--s~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .|++|+++||||  ++|||+++|++|++.|++|++++|..... +..+.+...         .+ ...++++|+++++++
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~---------~~-~~~~~~~Dv~d~~~v   71 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAE---------FG-SDLVFPCDVASDEQI   71 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH-HHHHHHHHh---------cC-CcceeeccCCCHHHH
Confidence            467999999996  68999999999999999999987653221 222223222         11 234689999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH--------h---h----------h-------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI--------L---S----------N-------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~--------l---~----------~-------------------------------  116 (222)
                      +++++.+.+.++++|++|||||+..        +   .          |                               
T Consensus        72 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~  151 (260)
T PRK06997         72 DALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER  151 (260)
T ss_pred             HHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc
Confidence            9999999999999999999998741        0   0          0                               


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC-CCCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD-TYFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                    +..++++|+.|++++||+||+|+||+++|+|...... .+.........|+++  ..+|+|+|+.+
T Consensus       152 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedva~~~  229 (260)
T PRK06997        152 VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRR--NVTIEEVGNVA  229 (260)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccc--cCCHHHHHHHH
Confidence                          8899999999999999999999999999987654321 111111112235555  78999999999


Q ss_pred             HHHhcCCCccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .||++ +.+.++||+.+..++
T Consensus       230 ~~l~s-~~~~~itG~~i~vdg  249 (260)
T PRK06997        230 AFLLS-DLASGVTGEITHVDS  249 (260)
T ss_pred             HHHhC-ccccCcceeEEEEcC
Confidence            99964 457899999995443

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.95  E-value=8.1e-28  Score=196.91  Aligned_cols=173  Identities=21%  Similarity=0.174  Sum_probs=140.5

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||++|||++++++|+++|++|++++|+.+.+++..++++..           .++.++++|+++.++++++++.+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~Dv~d~~~~~~~~~~~   70 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-----------GEVYAVKADLSDKDDLKNLVKEA   70 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-----------CCceEEEcCCCCHHHHHHHHHHH
Confidence            6999999999999999999999999999999999888888777542           26788999999999999999999


Q ss_pred             HhhccceeEEEechhhHH------------------hhh-----------------------------------------
Q psy7936          96 NQTEANVHILINNAVYCI------------------LSN-----------------------------------------  116 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~------------------l~~-----------------------------------------  116 (222)
                      .+.++++|++|||||...                  .+|                                         
T Consensus        71 ~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (259)
T PRK08340         71 WELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVL  150 (259)
T ss_pred             HHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchH
Confidence            999999999999999631                  000                                         


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC----------CC-CcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD----------TY-FPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                             +..++++|+.+++++||+||+|+||+++|+|.+....          ++ +........|+++  +.+|+|+|
T Consensus       151 y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dva  228 (259)
T PRK08340        151 ADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKR--TGRWEELG  228 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccC--CCCHHHHH
Confidence                   7999999999999999999999999999998753110          00 0011112235555  78999999


Q ss_pred             HHHHHHhcCCCccccccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.+.||+ ++...++||+.+..++
T Consensus       229 ~~~~fL~-s~~~~~itG~~i~vdg  251 (259)
T PRK08340        229 SLIAFLL-SENAEYMLGSTIVFDG  251 (259)
T ss_pred             HHHHHHc-CcccccccCceEeecC
Confidence            9999996 5567899999985443

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.3e-27  Score=193.18  Aligned_cols=182  Identities=21%  Similarity=0.241  Sum_probs=147.4

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +++++++|+++||||++|||.+++++|+++|++|++++|+.+.++++.+.+...          +.++.++++|+++.++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~   71 (252)
T PRK07035          2 NLFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA----------GGKAEALACHIGEMEQ   71 (252)
T ss_pred             CccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEEcCCCCHHH
Confidence            346788999999999999999999999999999999999998888888777653          4567889999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh-----------------hh----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL-----------------SN----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l-----------------~~----------------------------------  116 (222)
                      +..+++.+.+.++++|++|||||....                 +|                                  
T Consensus        72 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~  151 (252)
T PRK07035         72 IDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP  151 (252)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC
Confidence            999999999999999999999985320                 00                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-CcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                   +..++++++.++.++||+||+|+||+++|+|........ .........|+.+  ..+|+|+|+.+.
T Consensus       152 ~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~  229 (252)
T PRK07035        152 GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRR--HAEPSEMAGAVL  229 (252)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCC--cCCHHHHHHHHH
Confidence                         789999999999999999999999999999876543221 1111111223444  679999999999


Q ss_pred             HHhcCCCccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ||+ ++...+++|+.+..++
T Consensus       230 ~l~-~~~~~~~~g~~~~~dg  248 (252)
T PRK07035        230 YLA-SDASSYTTGECLNVDG  248 (252)
T ss_pred             HHh-CccccCccCCEEEeCC
Confidence            996 4457799999995444

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.95  E-value=5.5e-27  Score=193.78  Aligned_cols=183  Identities=27%  Similarity=0.224  Sum_probs=146.8

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +++++++|+++||||++|||+++++.|+++|++|++++|+.+..+++.+.+...          +.++.++++|+++.++
T Consensus         4 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~   73 (278)
T PRK08277          4 NLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA----------GGEALAVKADVLDKES   73 (278)
T ss_pred             ceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEECCCCCHHH
Confidence            345678999999999999999999999999999999999998888887777542          4578899999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH-------------------------------hhh--------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI-------------------------------LSN--------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~-------------------------------l~~--------------------  116 (222)
                      +..+++.+.+.++++|++|||||...                               .+|                    
T Consensus        74 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  153 (278)
T PRK08277         74 LEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKG  153 (278)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999998420                               000                    


Q ss_pred             ---------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---C---CcchhhhH
Q psy7936         117 ---------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---Y---FPGARTLG  163 (222)
Q Consensus       117 ---------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---~---~~~~~~~~  163 (222)
                                                 +..++++++.+++++||+||+|+||+++|++.......   .   ........
T Consensus       154 g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  233 (278)
T PRK08277        154 GNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAH  233 (278)
T ss_pred             cEEEEEccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhcc
Confidence                                       68899999999999999999999999999986543211   0   00111122


Q ss_pred             HHHHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         164 RVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       164 ~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .|+++  +.+|+|+|+.++||++.+...++||+.+..++
T Consensus       234 ~p~~r--~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdg  270 (278)
T PRK08277        234 TPMGR--FGKPEELLGTLLWLADEKASSFVTGVVLPVDG  270 (278)
T ss_pred             CCccC--CCCHHHHHHHHHHHcCccccCCcCCCEEEECC
Confidence            34455  78999999999999644267899999994433

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.95  E-value=1.7e-28  Score=198.90  Aligned_cols=168  Identities=26%  Similarity=0.284  Sum_probs=139.4

Q ss_pred             cCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHHhh
Q psy7936          21 GCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQT   98 (222)
Q Consensus        21 Gas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~~~   98 (222)
                      |++  +|||+++|+.|+++|++|++++|+.+++++..+.+....         +.+  ++++|+++.++++++++.+.+.
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~---------~~~--~~~~D~~~~~~v~~~~~~~~~~   69 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY---------GAE--VIQCDLSDEESVEALFDEAVER   69 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT---------TSE--EEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc---------CCc--eEeecCcchHHHHHHHHHHHhh
Confidence            566  999999999999999999999999998777777776652         334  4999999999999999999999


Q ss_pred             c-cceeEEEechhhHHhh---h----------------------------------------------------------
Q psy7936          99 E-ANVHILINNAVYCILS---N----------------------------------------------------------  116 (222)
Q Consensus        99 ~-~~id~li~~ag~~~l~---~----------------------------------------------------------  116 (222)
                      + +++|++|||+|.....   .                                                          
T Consensus        70 ~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~  149 (241)
T PF13561_consen   70 FGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSA  149 (241)
T ss_dssp             HCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHH
T ss_pred             cCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHH
Confidence            9 9999999999776520   0                                                          


Q ss_pred             ----HHHHHHHHHhhcCC-CCeEEEEEeCCcccCCcCCCCCC-CCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         117 ----NILFYSILFYAIPG-KNVNVYAVHPGIVKTELGRYMDD-TYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       117 ----~~~~~~~la~~~~~-~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                          +..+++++|.|+++ +|||||+|+||+++|++...... ++.........|+++  ..+|+|+|..+.||+ ++..
T Consensus       150 sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r--~~~~~evA~~v~fL~-s~~a  226 (241)
T PF13561_consen  150 SKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGR--LGTPEEVANAVLFLA-SDAA  226 (241)
T ss_dssp             HHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSS--HBEHHHHHHHHHHHH-SGGG
T ss_pred             HHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCC--CcCHHHHHHHHHHHh-Cccc
Confidence                89999999999999 99999999999999998665432 122333335567777  689999999999996 6678


Q ss_pred             cccccccccccc
Q psy7936         191 AKETGLYYSDYK  202 (222)
Q Consensus       191 ~~~~G~~i~~~~  202 (222)
                      .++||+.|..++
T Consensus       227 ~~itG~~i~vDG  238 (241)
T PF13561_consen  227 SYITGQVIPVDG  238 (241)
T ss_dssp             TTGTSEEEEEST
T ss_pred             cCccCCeEEECC
Confidence            899999994443

...

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.95  E-value=2.1e-27  Score=194.75  Aligned_cols=177  Identities=20%  Similarity=0.233  Sum_probs=140.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+             +.++.++++|+++.+++.
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~   68 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-------------GDHVLVVEGDVTSYADNQ   68 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------CCcceEEEccCCCHHHHH
Confidence            3468999999999999999999999999999999999988776655443             336778999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh---------------------hh--------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL---------------------SN--------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l---------------------~~--------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+...                     +|                                
T Consensus        69 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  148 (263)
T PRK06200         69 RAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFY  148 (263)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcC
Confidence            9999999999999999999996420                     00                                


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC----------CCcchhhhHHHHHHHhcC
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT----------YFPGARTLGRVLMWWWMK  172 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~~~~~~~~  172 (222)
                                    +..+++.++.++++. |+||+|+||+++|+|.......          ..........|+++  +.
T Consensus       149 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~  225 (263)
T PRK06200        149 PGGGGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQF--AP  225 (263)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCC--CC
Confidence                          788999999999885 9999999999999986532110          00111112245555  78


Q ss_pred             ChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         173 TPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       173 ~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+|+|+.+.||+++.++.++||+.+..++
T Consensus       226 ~~~eva~~~~fl~s~~~~~~itG~~i~vdg  255 (263)
T PRK06200        226 QPEDHTGPYVLLASRRNSRALTGVVINADG  255 (263)
T ss_pred             CHHHHhhhhhheecccccCcccceEEEEcC
Confidence            999999999999754337899999995443

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.95  E-value=1.3e-27  Score=199.58  Aligned_cols=198  Identities=14%  Similarity=0.119  Sum_probs=144.0

Q ss_pred             CCCCCCEEEEecC--CCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhh-hhhcccCCCC---CeEEEEecCC-
Q psy7936          10 SRLDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHF-EVATSEDKKP---GEVLIKKLDL-   82 (222)
Q Consensus        10 ~~~~~k~~lVtGa--s~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~-~~~~~~~~~~---~~~~~~~~D~-   82 (222)
                      ++|+||++|||||  ++|||+++|+.|++.|++|++ +|+.+.++++...+.... +..... ..+   .....+.+|+ 
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKL-PDGSLMEITKVYPLDAV   82 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhc-ccccccCcCeeeeccee
Confidence            3488999999999  899999999999999999998 888888888887775320 000000 011   1246788898 


Q ss_pred             -CC------------------hhhHHHHHHHHHhhccceeEEEechhhHH-----hh-------------h---------
Q psy7936          83 -AS------------------FKSIRDCAQDINQTEANVHILINNAVYCI-----LS-------------N---------  116 (222)
Q Consensus        83 -~~------------------~~~v~~~~~~i~~~~~~id~li~~ag~~~-----l~-------------~---------  116 (222)
                       ++                  .++++++++.+.+.++++|+||||||...     +.             |         
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~  162 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ  162 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             43                  34899999999999999999999997421     00             0         


Q ss_pred             -------------------------------------HHHHHHHHHhhcCC-CCeEEEEEeCCcccCCcCCCCCCC-CCc
Q psy7936         117 -------------------------------------NILFYSILFYAIPG-KNVNVYAVHPGIVKTELGRYMDDT-YFP  157 (222)
Q Consensus       117 -------------------------------------~~~~~~~la~~~~~-~gI~v~~v~PG~v~T~~~~~~~~~-~~~  157 (222)
                                                           +..|+++|+.|+++ +||+||+|+||+++|+|....... +..
T Consensus       163 ~~~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~  242 (303)
T PLN02730        163 HFGPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMI  242 (303)
T ss_pred             HHHHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHH
Confidence                                                 78999999999986 799999999999999998653211 111


Q ss_pred             chhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccccccccccccCCCccc
Q psy7936         158 GARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFPFE  212 (222)
Q Consensus       158 ~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~~~~~~~~  212 (222)
                      .......|+.+  ..+|+|+|..++||+ ++...+++|+.+..++......+..|
T Consensus       243 ~~~~~~~pl~r--~~~peevA~~~~fLa-S~~a~~itG~~l~vdGG~~~~g~~~~  294 (303)
T PLN02730        243 EYSYANAPLQK--ELTADEVGNAAAFLA-SPLASAITGATIYVDNGLNAMGLALD  294 (303)
T ss_pred             HHHHhcCCCCC--CcCHHHHHHHHHHHh-CccccCccCCEEEECCCccccccCCC
Confidence            11101123344  679999999999997 55578999999965555554444444

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.95  E-value=3.2e-27  Score=193.16  Aligned_cols=182  Identities=21%  Similarity=0.197  Sum_probs=144.6

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ++...+++|++|||||++|||.++++.|+++|++|++++|+ +..+++.+.+...          +.++.++++|+++.+
T Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~   76 (258)
T PRK06935          8 MDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE----------GRKVTFVQVDLTKPE   76 (258)
T ss_pred             cccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc----------CCceEEEEcCCCCHH
Confidence            34456889999999999999999999999999999999998 5566665555432          457889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------  116 (222)
                      ++.++++++.+.++++|++|||+|....                +|                                  
T Consensus        77 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  156 (258)
T PRK06935         77 SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG  156 (258)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC
Confidence            9999999999999999999999987430                00                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc-chhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP-GARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                   +..++++++.++.++||+||+|+||+++|++.......... .......|.++  +.+|+|+|..+.
T Consensus       157 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~  234 (258)
T PRK06935        157 GKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGR--WGEPDDLMGAAV  234 (258)
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCC--CCCHHHHHHHHH
Confidence                         68899999999999999999999999999987654321111 11111223344  789999999999


Q ss_pred             HHhcCCCccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ||+ ++...+++|+.+..++
T Consensus       235 ~l~-s~~~~~~~G~~i~~dg  253 (258)
T PRK06935        235 FLA-SRASDYVNGHILAVDG  253 (258)
T ss_pred             HHc-ChhhcCCCCCEEEECC
Confidence            996 5567899999995443

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=2.8e-27  Score=193.09  Aligned_cols=184  Identities=18%  Similarity=0.176  Sum_probs=148.8

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      +++.++++|+++||||++|||++++++|+++|++|++++|+++.++++.+.++..          +.++.++++|+++.+
T Consensus         3 ~~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~----------~~~~~~~~~D~~~~~   72 (255)
T PRK07523          3 LNLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ----------GLSAHALAFDVTDHD   72 (255)
T ss_pred             ccccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc----------CceEEEEEccCCCHH
Confidence            3556789999999999999999999999999999999999998888877777542          457889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------  116 (222)
                      +++++++.+.+.++++|++|||+|....                .|                                  
T Consensus        73 ~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  152 (255)
T PRK07523         73 AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA  152 (255)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC
Confidence            9999999999999999999999987430                00                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-CcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                   +..+++.++.+++++||+||+|.||+++|++........ .........|+.+  +.+|+|+|..++
T Consensus       153 ~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~  230 (255)
T PRK07523        153 RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGR--WGKVEELVGACV  230 (255)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCC--CcCHHHHHHHHH
Confidence                         688999999999999999999999999999876443221 1111112234444  778999999999


Q ss_pred             HHhcCCCcccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ||+ +++..+++|+.+..++.
T Consensus       231 ~l~-~~~~~~~~G~~i~~~gg  250 (255)
T PRK07523        231 FLA-SDASSFVNGHVLYVDGG  250 (255)
T ss_pred             HHc-CchhcCccCcEEEECCC
Confidence            996 44678999999854433

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.5e-27  Score=191.78  Aligned_cols=180  Identities=19%  Similarity=0.155  Sum_probs=145.7

Q ss_pred             CCCCCEEEEecCCC-chHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNT-GIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~-giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+++|+++||||++ |||+++++.|+++|++|++++|+.+.+++..+.++...        +..++.++++|+++.+++.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~   85 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAEL--------GLGRVEAVVCDVTSEAQVD   85 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhc--------CCceEEEEEccCCCHHHHH
Confidence            46789999999985 99999999999999999999999988888887776532        2347889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-----------h-----hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-----------L-----SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-----------l-----~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||...           +     +|                                     
T Consensus        86 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~  165 (262)
T PRK07831         86 ALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQH  165 (262)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC
Confidence            999999888899999999999642           0     00                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                 +..++++++.+++++||+||+|+||+++|++.......+.........++++  +.+|+|+|+.++||+
T Consensus       166 ~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r--~~~p~~va~~~~~l~  243 (262)
T PRK07831        166 GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGR--AAEPWEVANVIAFLA  243 (262)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHHc
Confidence                       7899999999999999999999999999998765422222111112234444  789999999999996


Q ss_pred             cCCCcccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDY  201 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~  201 (222)
                       ++...++||+.+..+
T Consensus       244 -s~~~~~itG~~i~v~  258 (262)
T PRK07831        244 -SDYSSYLTGEVVSVS  258 (262)
T ss_pred             -CchhcCcCCceEEeC
Confidence             455789999998443

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.7e-27  Score=192.12  Aligned_cols=180  Identities=26%  Similarity=0.249  Sum_probs=146.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +.+++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+.++..          +.++.++++|+++.+++.
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~i~   72 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA----------GGEALFVACDVTRDAEVK   72 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc----------CCceEEEEcCCCCHHHHH
Confidence            3478999999999999999999999999999999999999888887777553          557889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----h-------------hh------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----L-------------SN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----l-------------~~------------------------------------  116 (222)
                      ++++.+.+.++++|++|||+|...    .             +|                                    
T Consensus        73 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~  152 (253)
T PRK06172         73 ALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP  152 (253)
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC
Confidence            999999999999999999998632    0             00                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC--CCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT--YFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                 +..++++++.++.++||+||+|+||+++|++.......  ..........|+.+  ..+|+|+++.+.|
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~ia~~~~~  230 (253)
T PRK06172        153 KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGR--IGKVEEVASAVLY  230 (253)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCC--ccCHHHHHHHHHH
Confidence                       78899999999999999999999999999998765321  11111112233444  6799999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |++. ...+++|++|..++
T Consensus       231 l~~~-~~~~~~G~~i~~dg  248 (253)
T PRK06172        231 LCSD-GASFTTGHALMVDG  248 (253)
T ss_pred             HhCc-cccCcCCcEEEECC
Confidence            9654 46799999995444

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.95  E-value=4.2e-27  Score=192.12  Aligned_cols=178  Identities=19%  Similarity=0.162  Sum_probs=140.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .+++++|+++|||+++|||++++++|++.|++|++++++..  .+..+.+..          .+.++.++++|+++.+++
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~----------~~~~~~~~~~Dl~~~~~~   72 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTA----------LGRRFLSLTADLRKIDGI   72 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHh----------cCCeEEEEECCCCCHHHH
Confidence            34688999999999999999999999999999998887542  344444443          245788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      .++++.+.+.++++|++|||||+..                .+|                                    
T Consensus        73 ~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  152 (253)
T PRK08993         73 PALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG  152 (253)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC
Confidence            9999999999999999999999753                000                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc-chhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP-GARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..++++++.++.++||+||+|+||+++|+|.......... .......|.++  +.+|+|+|..+.|
T Consensus       153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~eva~~~~~  230 (253)
T PRK08993        153 IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGR--WGLPSDLMGPVVF  230 (253)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                        78999999999999999999999999999987654321111 11112234444  7899999999999


Q ss_pred             HhcCCCcccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDY  201 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~  201 (222)
                      |+ ++...+++|+.+..+
T Consensus       231 l~-s~~~~~~~G~~~~~d  247 (253)
T PRK08993        231 LA-SSASDYINGYTIAVD  247 (253)
T ss_pred             Hh-CccccCccCcEEEEC
Confidence            96 556789999998443

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.95  E-value=7.4e-27  Score=194.17  Aligned_cols=175  Identities=21%  Similarity=0.218  Sum_probs=139.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh---------hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV---------EKAETTASEIRKHFEVATSEDKKPGEVLIKKLD   81 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D   81 (222)
                      .+++|++|||||++|||+++|+.|++.|++|++++|+.         +.++++.+++...          +.++.++.+|
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~D   72 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA----------GGEAVANGDD   72 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc----------CCceEEEeCC
Confidence            36799999999999999999999999999999998876         6677777776542          5578899999


Q ss_pred             CCChhhHHHHHHHHHhhccceeEEEechhhHH---------------------------------hh----------h--
Q psy7936          82 LASFKSIRDCAQDINQTEANVHILINNAVYCI---------------------------------LS----------N--  116 (222)
Q Consensus        82 ~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~---------------------------------l~----------~--  116 (222)
                      +++.+++.++++.+.+.++++|++|||||+..                                 +.          .  
T Consensus        73 v~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~I  152 (286)
T PRK07791         73 IADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARI  152 (286)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEE
Confidence            99999999999999999999999999999743                                 00          0  


Q ss_pred             ------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcC
Q psy7936         117 ------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMK  172 (222)
Q Consensus       117 ------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (222)
                                              +..++++++.|++++||+||+|+|| ++|+|.......     .....+..+....
T Consensus       153 v~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~-----~~~~~~~~~~~~~  226 (286)
T PRK07791        153 INTSSGAGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAE-----MMAKPEEGEFDAM  226 (286)
T ss_pred             EEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHH-----HHhcCcccccCCC
Confidence                                    7899999999999999999999999 799886432110     0000111111146


Q ss_pred             ChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         173 TPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       173 ~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+|+|+.++||+ ++...+++|+++..++
T Consensus       227 ~pedva~~~~~L~-s~~~~~itG~~i~vdg  255 (286)
T PRK07791        227 APENVSPLVVWLG-SAESRDVTGKVFEVEG  255 (286)
T ss_pred             CHHHHHHHHHHHh-CchhcCCCCcEEEEcC
Confidence            9999999999996 4457899999995443

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.95  E-value=3.9e-27  Score=193.17  Aligned_cols=175  Identities=18%  Similarity=0.183  Sum_probs=139.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.             .+.++.++++|+++.+++.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~-------------~~~~~~~~~~D~~~~~~~~~   68 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA-------------HGDAVVGVEGDVRSLDDHKE   68 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh-------------cCCceEEEEeccCCHHHHHH
Confidence            36789999999999999999999999999999999998776665432             13468889999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----h------------h-----h---------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----L------------S-----N---------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----l------------~-----~---------------------------------  116 (222)
                      +++++.+.++++|++|||||...    +            .     |                                 
T Consensus        69 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~  148 (262)
T TIGR03325        69 AVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP  148 (262)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC
Confidence            99999999999999999998631    0            0     0                                 


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC---CC------CcchhhhHHHHHHHhcCCh
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD---TY------FPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~p  174 (222)
                                   +..+++.++.+++++ |+||+|+||+++|+|......   ..      .........|+++  ..+|
T Consensus       149 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p  225 (262)
T TIGR03325       149 NGGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGR--MPDA  225 (262)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCC--CCCh
Confidence                         899999999999887 999999999999998653210   00      0011112245556  7899


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      +|+|+.+.||++++...+++|+.+..+
T Consensus       226 ~eva~~~~~l~s~~~~~~~tG~~i~vd  252 (262)
T TIGR03325       226 EEYTGAYVFFATRGDTVPATGAVLNYD  252 (262)
T ss_pred             HHhhhheeeeecCCCcccccceEEEec
Confidence            999999999976555678999999443

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-25  Score=189.34  Aligned_cols=188  Identities=27%  Similarity=0.333  Sum_probs=144.5

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           5 KAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         5 ~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      +-.++.++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++....        ++.++.+++||+++
T Consensus         5 ~~~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~--------~~~~v~~~~~Dl~d   76 (313)
T PRK05854          5 LDITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAV--------PDAKLSLRALDLSS   76 (313)
T ss_pred             ccccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC--------CCCceEEEEecCCC
Confidence            3345677899999999999999999999999999999999999999888888886542        34578899999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHHh---------------hh---------------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCIL---------------SN---------------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~l---------------~~---------------------------------  116 (222)
                      .++++++++.+.+.++++|++|||||+...               +|                                 
T Consensus        77 ~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~  156 (313)
T PRK05854         77 LASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRG  156 (313)
T ss_pred             HHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCC
Confidence            999999999999999999999999997530               00                                 


Q ss_pred             -------------------------HHHHHHHHHhhc--CCCCeEEEEEeCCcccCCcCCCCCCCC--Ccchh-hhHHHH
Q psy7936         117 -------------------------NILFYSILFYAI--PGKNVNVYAVHPGIVKTELGRYMDDTY--FPGAR-TLGRVL  166 (222)
Q Consensus       117 -------------------------~~~~~~~la~~~--~~~gI~v~~v~PG~v~T~~~~~~~~~~--~~~~~-~~~~~~  166 (222)
                                               +..|++.|+.++  .++||+||+|+||+++|+|........  ..... .....+
T Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  236 (313)
T PRK05854        157 AINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSL  236 (313)
T ss_pred             CcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHH
Confidence                                     667777887753  457899999999999999976532110  00000 011111


Q ss_pred             H--HHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         167 M--WWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       167 ~--~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .  .....++++.|...++++.++..  .+|.|+.+++
T Consensus       237 ~~~~~~~~~~~~ga~~~l~~a~~~~~--~~g~~~~~~~  272 (313)
T PRK05854        237 SARGFLVGTVESAILPALYAATSPDA--EGGAFYGPRG  272 (313)
T ss_pred             hhcccccCCHHHHHHHhhheeeCCCC--CCCcEECCCc
Confidence            1  11246899999999999888754  3699987654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.95  E-value=1.6e-26  Score=188.77  Aligned_cols=181  Identities=24%  Similarity=0.254  Sum_probs=146.2

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .+.+++|+++||||++|||.++++.|+++|++|++++|+.+..+++.+.++..          +.++.++.+|+++.+++
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~~i   75 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL----------GGQAFACRCDITSEQEL   75 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHH
Confidence            34578999999999999999999999999999999999998888887777552          45788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh---------------hh-------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL---------------SN-------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l---------------~~-------------------------------------  116 (222)
                      .++++.+.+.++++|++|||||....               +|                                     
T Consensus        76 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  155 (255)
T PRK06113         76 SALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN  155 (255)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC
Confidence            99999998888999999999986320               00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..++++++.++.+.||+||+|+||+++|++.................++.+  ..+|+|+++.++||+ 
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~a~~~~~l~-  232 (255)
T PRK06113        156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRR--LGQPQDIANAALFLC-  232 (255)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHHc-
Confidence                      7889999999999999999999999999998765422111111111123333  679999999999996 


Q ss_pred             CCCccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYK  202 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~  202 (222)
                      ++...+++|+.|..++
T Consensus       233 ~~~~~~~~G~~i~~~g  248 (255)
T PRK06113        233 SPAASWVSGQILTVSG  248 (255)
T ss_pred             CccccCccCCEEEECC
Confidence            5667899999995443

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=1.4e-26  Score=190.15  Aligned_cols=182  Identities=18%  Similarity=0.146  Sum_probs=147.5

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ++.+++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+.+...          +.++.+++||+++.+
T Consensus         3 ~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~   72 (265)
T PRK07097          3 ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL----------GIEAHGYVCDVTDED   72 (265)
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc----------CCceEEEEcCCCCHH
Confidence            4557789999999999999999999999999999999999998888877777642          557899999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------  116 (222)
                      +++++++++.+.++++|++|||||....                +|                                  
T Consensus        73 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  152 (265)
T PRK07097         73 GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG  152 (265)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC
Confidence            9999999999999999999999997540                00                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-------CCcchhhhHHHHHHHhcCChHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-------YFPGARTLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~p~e  176 (222)
                                   +..++++++.++.++||+||+|+||+++|++.......       .+........+..+  +.+|+|
T Consensus       153 ~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d  230 (265)
T PRK07097        153 RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAAR--WGDPED  230 (265)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccC--CcCHHH
Confidence                         68999999999999999999999999999987654320       01111111223334  678999


Q ss_pred             HHHHHHHHhcCCCcccccccccccc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      +|..+.+++.+ ...+++|+.+..+
T Consensus       231 va~~~~~l~~~-~~~~~~g~~~~~~  254 (265)
T PRK07097        231 LAGPAVFLASD-ASNFVNGHILYVD  254 (265)
T ss_pred             HHHHHHHHhCc-ccCCCCCCEEEEC
Confidence            99999999654 5679999998443

>PRK06128 oxidoreductase; Provisional

Probab=99.95  E-value=1.9e-26  Score=192.93  Aligned_cols=181  Identities=22%  Similarity=0.177  Sum_probs=141.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh--HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE--KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      +..|++|++|||||++|||+++++.|+++|++|++++++.+  ..+++.+.++..          +.++.+++||+++.+
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~  119 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE----------GRKAVALPGDLKDEA  119 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc----------CCeEEEEecCCCCHH
Confidence            44578999999999999999999999999999999887543  445555555542          557889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH-----------------hhh---------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI-----------------LSN---------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~---------------------------------  116 (222)
                      +++++++++.+.++++|++|||||...                 -+|                                 
T Consensus       120 ~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~  199 (300)
T PRK06128        120 FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS  199 (300)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC
Confidence            999999999999999999999999642                 000                                 


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..|++.++.++.++||+||+|+||+++|+|....... +.........|+++  ..+|+|+|..++|
T Consensus       200 ~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dva~~~~~  277 (300)
T PRK06128        200 PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKR--PGQPVEMAPLYVL  277 (300)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCC--CcCHHHHHHHHHH
Confidence                        78999999999999999999999999999986532211 11111111234445  7899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |++ +...+++|+.+..++
T Consensus       278 l~s-~~~~~~~G~~~~v~g  295 (300)
T PRK06128        278 LAS-QESSYVTGEVFGVTG  295 (300)
T ss_pred             HhC-ccccCccCcEEeeCC
Confidence            964 457799999995444

>PRK09242 tropinone reductase; Provisional

Probab=99.94  E-value=1.9e-26  Score=188.46  Aligned_cols=184  Identities=25%  Similarity=0.251  Sum_probs=148.2

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .++++++|+++||||++|||.++++.|+++|++|++++|+.+.++++.+.+....        ++.++.++.+|+++.++
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~Dl~~~~~   74 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEF--------PEREVHGLAADVSDDED   74 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC--------CCCeEEEEECCCCCHHH
Confidence            3467889999999999999999999999999999999999998888887776542        35689999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH-------------------------hhh--------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI-------------------------LSN--------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~-------------------------l~~--------------------------  116 (222)
                      +.++++.+.+.++++|++|||||...                         ++.                          
T Consensus        75 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~  154 (257)
T PRK09242         75 RRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV  154 (257)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC
Confidence            99999999999999999999999632                         000                          


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC-cchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF-PGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..+++.++.++.++||+||+|+||+++|+|.......+. ........++.+  +.+|+|++..+.|
T Consensus       155 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~~  232 (257)
T PRK09242        155 RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRR--VGEPEEVAAAVAF  232 (257)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                        7889999999999999999999999999999765432211 111111223333  6799999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |++ +...+++|+.+..++
T Consensus       233 l~~-~~~~~~~g~~i~~~g  250 (257)
T PRK09242        233 LCM-PAASYITGQCIAVDG  250 (257)
T ss_pred             HhC-cccccccCCEEEECC
Confidence            974 456789999985443

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.94  E-value=1.9e-26  Score=188.23  Aligned_cols=185  Identities=20%  Similarity=0.213  Sum_probs=149.2

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           5 KAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         5 ~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      +.+++..+++|+++||||++|||+++++.|+++|++|++++|+.+.++++.++++..          +.++.++.||+++
T Consensus         2 ~~~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~   71 (256)
T PRK06124          2 SILQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA----------GGAAEALAFDIAD   71 (256)
T ss_pred             CcccccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc----------CCceEEEEccCCC
Confidence            455677789999999999999999999999999999999999998888888777653          4578899999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------  116 (222)
                      .+++.++++.+.+.++++|++|||+|....                +|                                
T Consensus        72 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~  151 (256)
T PRK06124         72 EEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQ  151 (256)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhc
Confidence            999999999999999999999999996430                00                                


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                     +..+++.++.++.++||+||+|+||+++|++....... ..........+.++  +.+|+|++..
T Consensus       152 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~  229 (256)
T PRK06124        152 VARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGR--WGRPEEIAGA  229 (256)
T ss_pred             cCCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCC--CCCHHHHHHH
Confidence                           67888999999998999999999999999986543221 11111111223334  6899999999


Q ss_pred             HHHHhcCCCccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +++|+ ++...++||+++..++
T Consensus       230 ~~~l~-~~~~~~~~G~~i~~dg  250 (256)
T PRK06124        230 AVFLA-SPAASYVNGHVLAVDG  250 (256)
T ss_pred             HHHHc-CcccCCcCCCEEEECC
Confidence            99996 5567899999995443

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.4e-26  Score=189.74  Aligned_cols=181  Identities=24%  Similarity=0.264  Sum_probs=141.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+.+ ..+..+.+..          .+.++.++++|+++.+++.
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~----------~~~~~~~~~~Dl~~~~~v~   70 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCG----------RGHRCTAVVADVRDPASVA   70 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHH----------hCCceEEEECCCCCHHHHH
Confidence            4578899999999999999999999999999999999875 3444444433          2457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++++.+.++++|++|||||....                .|                                     
T Consensus        71 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  150 (263)
T PRK08226         71 AAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADP  150 (263)
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCC
Confidence            9999999999999999999996430                00                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---CCcc----hhhhHHHHHHHhcCChHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---YFPG----ARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~p~e~a  178 (222)
                                 +..+++.++.++.++||+||+|+||+++|+|.......   ....    ......|+++  +.+|+|+|
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~va  228 (263)
T PRK08226        151 GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRR--LADPLEVG  228 (263)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCC--CCCHHHHH
Confidence                       78899999999999999999999999999987654211   0111    1111123444  67999999


Q ss_pred             HHHHHHhcCCCccccccccc-cccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYY-SDYKVA  204 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i-~~~~~~  204 (222)
                      +.+.||+ ++...+++|+++ .+++..
T Consensus       229 ~~~~~l~-~~~~~~~~g~~i~~dgg~~  254 (263)
T PRK08226        229 ELAAFLA-SDESSYLTGTQNVIDGGST  254 (263)
T ss_pred             HHHHHHc-CchhcCCcCceEeECCCcc
Confidence            9999996 556789999999 454443

>PRK08643 acetoin reductase; Validated

Probab=99.94  E-value=2.5e-26  Score=187.58  Aligned_cols=176  Identities=22%  Similarity=0.211  Sum_probs=142.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|+++||||++|||.++++.|+++|++|++++|+.+.++++...+...          +.++.++++|++++++++++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~   71 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD----------GGKAIAVKADVSDRDQVFAAVR   71 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEECCCCCHHHHHHHHH
Confidence            689999999999999999999999999999999998888887777542          4578899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHh----------------hh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCIL----------------SN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------------  116 (222)
                      ++.+.++++|++|||||+...                +|                                         
T Consensus        72 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  151 (256)
T PRK08643         72 QVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAV  151 (256)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCch
Confidence            999999999999999987430                00                                         


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---------CC-cchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---------YF-PGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                             +..+++.++.++.++||+||+|+||+++|+++......         .+ ........++++  +.+|+|+|.
T Consensus       152 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~  229 (256)
T PRK08643        152 YSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGR--LSEPEDVAN  229 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCC--CcCHHHHHH
Confidence                   67889999999999999999999999999987643210         00 000111123344  679999999


Q ss_pred             HHHHHhcCCCccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .+.||+ ++...++||+.+..++
T Consensus       230 ~~~~L~-~~~~~~~~G~~i~vdg  251 (256)
T PRK08643        230 CVSFLA-GPDSDYITGQTIIVDG  251 (256)
T ss_pred             HHHHHh-CccccCccCcEEEeCC
Confidence            999996 5567899999995444

>PRK07985 oxidoreductase; Provisional

Probab=99.94  E-value=2.5e-26  Score=191.77  Aligned_cols=181  Identities=19%  Similarity=0.148  Sum_probs=140.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh--hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV--EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      +..+++|++|||||++|||+++++.|+++|++|++++|+.  +..+++.+.+..          .+.++.++.+|+++.+
T Consensus        44 ~~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~  113 (294)
T PRK07985         44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE----------CGRKAVLLPGDLSDEK  113 (294)
T ss_pred             CCccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH----------cCCeEEEEEccCCCHH
Confidence            3457889999999999999999999999999999988653  445555555543          2557889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH-----------------hhh---------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI-----------------LSN---------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~---------------------------------  116 (222)
                      ++.++++.+.+.++++|++|||||...                 -+|                                 
T Consensus       114 ~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~  193 (294)
T PRK07985        114 FARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS  193 (294)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC
Confidence            999999999999999999999998631                 000                                 


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..+++.++.+++++||+||+|+||+++|+|....... ..........|+++  ..+|+|+|..+.|
T Consensus       194 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r--~~~pedva~~~~f  271 (294)
T PRK07985        194 PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKR--AGQPAELAPVYVY  271 (294)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCC--CCCHHHHHHHHHh
Confidence                        78899999999999999999999999999986432111 11111112234444  6899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+ ++...+++|+.+..++
T Consensus       272 L~-s~~~~~itG~~i~vdg  289 (294)
T PRK07985        272 LA-SQESSYVTAEVHGVCG  289 (294)
T ss_pred             hh-ChhcCCccccEEeeCC
Confidence            96 5567899999995443

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.6e-26  Score=186.29  Aligned_cols=177  Identities=24%  Similarity=0.255  Sum_probs=138.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe-CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +++|+++||||++|||.++++.|++.|++|++++ |+.+.+++...++...          +.++..+++|+++.+++..
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~   71 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN----------GGSAFSIGANLESLHGVEA   71 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc----------CCceEEEecccCCHHHHHH
Confidence            3689999999999999999999999999998875 6667777777766542          4567889999999999999


Q ss_pred             HHHHHHhh----cc--ceeEEEechhhHHh----------------hh--------------------------------
Q psy7936          91 CAQDINQT----EA--NVHILINNAVYCIL----------------SN--------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~----~~--~id~li~~ag~~~l----------------~~--------------------------------  116 (222)
                      +++.+.+.    ++  ++|++|||||+...                +|                                
T Consensus        72 ~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~  151 (252)
T PRK12747         72 LYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS  151 (252)
T ss_pred             HHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC
Confidence            98887653    33  89999999996430                00                                


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchh-hhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGAR-TLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                   +..++++++.++.++||+||+|+||+++|+|.......+..... ....++++  +.+|+|+|+.+.
T Consensus       152 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~  229 (252)
T PRK12747        152 LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNR--LGEVEDIADTAA  229 (252)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccC--CCCHHHHHHHHH
Confidence                         78999999999999999999999999999997654322111111 01123444  789999999999


Q ss_pred             HHhcCCCcccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~  201 (222)
                      ||+ ++...+++|+.+..+
T Consensus       230 ~l~-s~~~~~~~G~~i~vd  247 (252)
T PRK12747        230 FLA-SPDSRWVTGQLIDVS  247 (252)
T ss_pred             HHc-CccccCcCCcEEEec
Confidence            996 556789999998543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.94  E-value=3.2e-26  Score=186.00  Aligned_cols=177  Identities=22%  Similarity=0.219  Sum_probs=139.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++|+++||||++|||.+++++|+++|++|++++|+..  .++.+.+...          +.++.++++|+++.+++..
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~   69 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL----------GRRFLSLTADLSDIEAIKA   69 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc----------CCceEEEECCCCCHHHHHH
Confidence            478999999999999999999999999999999999753  3444444432          4578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++++.+.++++|++|||||....                +|                                      
T Consensus        70 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  149 (248)
T TIGR01832        70 LVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR  149 (248)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC
Confidence            999998888999999999987430                00                                      


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc-chhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP-GARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                +..++++++.++.++||+||+|+||+++|++.......... .......|.++  +.+|+|+|+.+.+|+
T Consensus       150 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l~  227 (248)
T TIGR01832       150 VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGR--WGTPDDIGGPAVFLA  227 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCC--CcCHHHHHHHHHHHc
Confidence                      78899999999999999999999999999987654321111 01111123333  789999999999996


Q ss_pred             cCCCccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYK  202 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~  202 (222)
                       ++...+++|+++..++
T Consensus       228 -s~~~~~~~G~~i~~dg  243 (248)
T TIGR01832       228 -SSASDYVNGYTLAVDG  243 (248)
T ss_pred             -CccccCcCCcEEEeCC
Confidence             5556899999985443

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.1e-26  Score=188.68  Aligned_cols=173  Identities=22%  Similarity=0.181  Sum_probs=137.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|+++|||+ +|||+++|+.|+ +|++|++++|+.+.++++.++++..          +.++.++++|+++.+++.++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dv~d~~~i~~~~~   69 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA----------GFDVSTQEVDVSSRESVKALAA   69 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEEeecCCHHHHHHHHH
Confidence            579999998 699999999996 7999999999998888777777542          4578899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHH-------------------------------------------hh---------------
Q psy7936          94 DINQTEANVHILINNAVYCI-------------------------------------------LS---------------  115 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~-------------------------------------------l~---------------  115 (222)
                      .+ +.++++|++|||||+..                                           ..               
T Consensus        70 ~~-~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  148 (275)
T PRK06940         70 TA-QTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPT  148 (275)
T ss_pred             HH-HhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccc
Confidence            88 56789999999998753                                           00               


Q ss_pred             ----------------h----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---CCcchhhhHHHH
Q psy7936         116 ----------------N----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---YFPGARTLGRVL  166 (222)
Q Consensus       116 ----------------~----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~  166 (222)
                                      +          +..+++.++.+++++||+||+|+||+++|+|.......   +.........|+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~  228 (275)
T PRK06940        149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA  228 (275)
T ss_pred             ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc
Confidence                            1          56778889999999999999999999999987542111   111111122355


Q ss_pred             HHHhcCChHHHHHHHHHHhcCCCcccccccccc-ccc
Q psy7936         167 MWWWMKTPEQGAQTTLHCALDEGAAKETGLYYS-DYK  202 (222)
Q Consensus       167 ~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~-~~~  202 (222)
                      ++  +.+|+|+|..+.||+ ++...++||+.+. +++
T Consensus       229 ~r--~~~peeia~~~~fL~-s~~~~~itG~~i~vdgg  262 (275)
T PRK06940        229 GR--PGTPDEIAALAEFLM-GPRGSFITGSDFLVDGG  262 (275)
T ss_pred             cc--CCCHHHHHHHHHHHc-CcccCcccCceEEEcCC
Confidence            55  789999999999996 5567899999994 444

>PRK12743 oxidoreductase; Provisional

Probab=99.94  E-value=5.5e-26  Score=185.76  Aligned_cols=188  Identities=23%  Similarity=0.198  Sum_probs=146.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +|+++||||++|||++++++|+++|++|+++++ +.+.++++.+.++..          +.++.++.+|+++.+++++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~   71 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH----------GVRAEIRQLDLSDLPEGAQAL   71 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc----------CCceEEEEccCCCHHHHHHHH
Confidence            579999999999999999999999999988865 566677777776552          568899999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHHh----------------hh----------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCIL----------------SN----------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------------  116 (222)
                      +++.+.++++|++|||+|....                +|                                        
T Consensus        72 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~  151 (256)
T PRK12743         72 DKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGAS  151 (256)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcc
Confidence            9999999999999999986430                00                                        


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                              +..++++++.++.++||+||+|+||+++|++....... .........++++  ..+|+|++..+.|++ ++
T Consensus       152 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~dva~~~~~l~-~~  227 (256)
T PRK12743        152 AYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSD-VKPDSRPGIPLGR--PGDTHEIASLVAWLC-SE  227 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChH-HHHHHHhcCCCCC--CCCHHHHHHHHHHHh-Cc
Confidence                    68889999999999999999999999999987543211 1111111223344  679999999999996 55


Q ss_pred             CcccccccccccccccccCCCcccccC
Q psy7936         189 GAAKETGLYYSDYKVAKSRNFPFELKG  215 (222)
Q Consensus       189 ~~~~~~G~~i~~~~~~~~~~~~~~~~~  215 (222)
                      ...+++|+++..++........+..+.
T Consensus       228 ~~~~~~G~~~~~dgg~~~~~~~~~~~~  254 (256)
T PRK12743        228 GASYTTGQSLIVDGGFMLANPQFNSEL  254 (256)
T ss_pred             cccCcCCcEEEECCCccccCCcccccc
Confidence            678999999955544444445555544

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=5.5e-26  Score=185.88  Aligned_cols=177  Identities=21%  Similarity=0.215  Sum_probs=137.8

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCC-----------hhHHHHHHHHHHHhhhhhcccCCCCCeEE
Q psy7936          10 SRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRD-----------VEKAETTASEIRKHFEVATSEDKKPGEVL   76 (222)
Q Consensus        10 ~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~-----------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   76 (222)
                      ..+++|+++||||+  +|||+++|++|+++|++|++++|+           .+...++.+.++.          .+.++.
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~   71 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK----------NGVKVS   71 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh----------cCCeEE
Confidence            46889999999999  499999999999999999988643           2233344444443          256889


Q ss_pred             EEecCCCChhhHHHHHHHHHhhccceeEEEechhhHHhh----------------h------------------------
Q psy7936          77 IKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILS----------------N------------------------  116 (222)
Q Consensus        77 ~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l~----------------~------------------------  116 (222)
                      ++++|+++.+++.++++.+.+.++++|++|||||.....                |                        
T Consensus        72 ~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv  151 (256)
T PRK12859         72 SMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRII  151 (256)
T ss_pred             EEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEE
Confidence            999999999999999999999999999999999875400                0                        


Q ss_pred             -----------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCC
Q psy7936         117 -----------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKT  173 (222)
Q Consensus       117 -----------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (222)
                                             +..|+++++.++.++||+||+|+||+++|++....    .........|+.+  ..+
T Consensus       152 ~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~----~~~~~~~~~~~~~--~~~  225 (256)
T PRK12859        152 NMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE----IKQGLLPMFPFGR--IGE  225 (256)
T ss_pred             EEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH----HHHHHHhcCCCCC--CcC
Confidence                                   78999999999999999999999999999874321    0001111223333  679


Q ss_pred             hHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         174 PEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       174 p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+|+|+.+.||+ ++...+++|+++..++.
T Consensus       226 ~~d~a~~~~~l~-s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        226 PKDAARLIKFLA-SEEAEWITGQIIHSEGG  254 (256)
T ss_pred             HHHHHHHHHHHh-CccccCccCcEEEeCCC
Confidence            999999999996 54578999999965543

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.4e-26  Score=187.23  Aligned_cols=178  Identities=25%  Similarity=0.241  Sum_probs=140.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+.+..+++.+.+...         .+.++.++.+|+++.+++.+
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~D~~~~~~~~~   74 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAA---------HGVDVAVHALDLSSPEAREQ   74 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh---------cCCceEEEEecCCCHHHHHH
Confidence            468999999999999999999999999999999999999888888777654         24578899999999999988


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.    ++++|++|||+|....                +|                                      
T Consensus        75 ~~~~----~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  150 (259)
T PRK06125         75 LAAE----AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADY  150 (259)
T ss_pred             HHHH----hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCc
Confidence            8764    4789999999997530                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---------CCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---------YFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                               +..++++++.++.++||+||+|+||+++|++.......         ..........|.++  +.+|+|+|
T Consensus       151 ~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va  228 (259)
T PRK06125        151 ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGR--PATPEEVA  228 (259)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCC--CcCHHHHH
Confidence                     78899999999999999999999999999975432110         00001101223344  67999999


Q ss_pred             HHHHHHhcCCCccccccccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~~~~~~  204 (222)
                      +.++||+ ++...++||+.+..++..
T Consensus       229 ~~~~~l~-~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        229 DLVAFLA-SPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             HHHHHHc-CchhccccCceEEecCCe
Confidence            9999996 556789999999554443

>PRK06484 short chain dehydrogenase; Validated

Probab=99.94  E-value=4.9e-26  Score=203.59  Aligned_cols=176  Identities=20%  Similarity=0.200  Sum_probs=141.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ...+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+             +.++..+.+|++|.+++++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~  332 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-------------GDEHLSVQADITDEAAVES  332 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------CCceeEEEccCCCHHHHHH
Confidence            347899999999999999999999999999999999988877766543             3356788999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----h-------------hh-------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----L-------------SN-------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----l-------------~~-------------------------------------  116 (222)
                      +++.+.+.++++|++|||||+..    +             +|                                     
T Consensus       333 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  412 (520)
T PRK06484        333 AFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRN  412 (520)
T ss_pred             HHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCc
Confidence            99999999999999999999752    0             00                                     


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC--CcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY--FPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                              +..|++.|+.++.++||+||+|+||+++|+|........  .........|+++  ..+|+|+|+.++||+ 
T Consensus       413 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dia~~~~~l~-  489 (520)
T PRK06484        413 AYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGR--LGDPEEVAEAIAFLA-  489 (520)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCC--CcCHHHHHHHHHHHh-
Confidence                    899999999999999999999999999999976532110  0111111223334  679999999999996 


Q ss_pred             CCCccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYK  202 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~  202 (222)
                      ++...++||+.+..++
T Consensus       490 s~~~~~~~G~~i~vdg  505 (520)
T PRK06484        490 SPAASYVNGATLTVDG  505 (520)
T ss_pred             CccccCccCcEEEECC
Confidence            4567899999994443

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-25  Score=184.33  Aligned_cols=181  Identities=25%  Similarity=0.249  Sum_probs=142.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC-hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++++|+++||||++|||.++++.|+++|++|++++|+ .+..+++.+.+...          +.++.++.+|+++.+++
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~~~~~i   72 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA----------GGEAIAVKGDVTVESDV   72 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc----------CCeEEEEEecCCCHHHH
Confidence            34789999999999999999999999999999998885 45566666666542          45788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      .++++.+.+.++++|++|||||....                +|                                    
T Consensus        73 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~  152 (261)
T PRK08936         73 VNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPW  152 (261)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCC
Confidence            99999999999999999999997430                00                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..+++.++.++.++||+||+|+||+++|++....... ..........|.++  ..+|+|+++.+.|
T Consensus       153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~~  230 (261)
T PRK08936        153 PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGY--IGKPEEIAAVAAW  230 (261)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                        67899999999999999999999999999987543211 11111111223334  6799999999999


Q ss_pred             HhcCCCcccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+++ ...+++|+.+..++.
T Consensus       231 l~s~-~~~~~~G~~i~~d~g  249 (261)
T PRK08936        231 LASS-EASYVTGITLFADGG  249 (261)
T ss_pred             HcCc-ccCCccCcEEEECCC
Confidence            9654 678999998854443

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9.1e-26  Score=184.02  Aligned_cols=180  Identities=24%  Similarity=0.213  Sum_probs=140.4

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+++++.+|+++||||++|||.++++.|+++|++|++++|+.+.. +....+            .+.++.++++|+++.+
T Consensus         8 ~~~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~------------~~~~~~~~~~Dl~~~~   74 (255)
T PRK06841          8 DLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQL------------LGGNAKGLVCDVSDSQ   74 (255)
T ss_pred             hhhcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh------------hCCceEEEEecCCCHH
Confidence            344668899999999999999999999999999999999987632 222222            1345678999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------  116 (222)
                      ++.++++++.+.++++|++|||+|....                +|                                  
T Consensus        75 ~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~  154 (255)
T PRK06841         75 SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA  154 (255)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC
Confidence            9999999999988999999999987430                00                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..++++++.+++++||+||+|+||+++|++.................|.++  +.+|+|+|+.+++
T Consensus       155 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~~  232 (255)
T PRK06841        155 LERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGR--FAYPEEIAAAALF  232 (255)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                         7889999999999999999999999999998764332111111112223334  6899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      ++ ++...+++|+.+..++
T Consensus       233 l~-~~~~~~~~G~~i~~dg  250 (255)
T PRK06841        233 LA-SDAAAMITGENLVIDG  250 (255)
T ss_pred             Hc-CccccCccCCEEEECC
Confidence            96 5567899999995443

>PRK06398 aldose dehydrogenase; Validated

Probab=99.94  E-value=6.9e-26  Score=185.58  Aligned_cols=171  Identities=22%  Similarity=0.178  Sum_probs=134.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+|+||+++||||++|||++++++|++.|++|++++|+.+.                     ..++.+++||+++.+++.
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~---------------------~~~~~~~~~D~~~~~~i~   60 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS---------------------YNDVDYFKVDVSNKEQVI   60 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc---------------------cCceEEEEccCCCHHHHH
Confidence            46789999999999999999999999999999999998642                     125678999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++++.+.++++|++|||||....                +|                                     
T Consensus        61 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  140 (258)
T PRK06398         61 KGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRN  140 (258)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCC
Confidence            9999999999999999999997430                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---CCcc-------hhhhHHHHHHHhcCChHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---YFPG-------ARTLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~p~e  176 (222)
                                +..++++++.|+.+. |+||+|+||+++|+|.......   ....       ......|+++  ..+|+|
T Consensus       141 ~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~e  217 (258)
T PRK06398        141 AAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKR--VGKPEE  217 (258)
T ss_pred             CchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCC--CcCHHH
Confidence                      788999999999876 9999999999999987543210   0000       0001123444  679999


Q ss_pred             HHHHHHHHhcCCCcccccccccc-cccccc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYS-DYKVAK  205 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~-~~~~~~  205 (222)
                      +|+.+.||+ ++...+++|+.+. +++...
T Consensus       218 va~~~~~l~-s~~~~~~~G~~i~~dgg~~~  246 (258)
T PRK06398        218 VAYVVAFLA-SDLASFITGECVTVDGGLRA  246 (258)
T ss_pred             HHHHHHHHc-CcccCCCCCcEEEECCcccc
Confidence            999999996 5557899999994 555433

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=2.7e-26  Score=191.54  Aligned_cols=203  Identities=14%  Similarity=0.066  Sum_probs=136.0

Q ss_pred             CCCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhh-hhcccCCCCC-----eEEEEec
Q psy7936           9 ASRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFE-VATSEDKKPG-----EVLIKKL   80 (222)
Q Consensus         9 ~~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~-~~~~~~~~~~-----~~~~~~~   80 (222)
                      +.+++||++||||++  +|||+++|+.|+++|++|++.++.+ .++.+.+....... ..... ..+.     ++..+.+
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKL-SNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccc-cccchhhhhhHHHhhh
Confidence            466899999999995  9999999999999999999987652 12222111110000 00000 0000     1111222


Q ss_pred             CCCCh------------------hhHHHHHHHHHhhccceeEEEechhhHH-----h-------------hh--------
Q psy7936          81 DLASF------------------KSIRDCAQDINQTEANVHILINNAVYCI-----L-------------SN--------  116 (222)
Q Consensus        81 D~~~~------------------~~v~~~~~~i~~~~~~id~li~~ag~~~-----l-------------~~--------  116 (222)
                      |+++.                  ++++++++.+.+.++++|++|||||...     +             +|        
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            33333                  4689999999999999999999997632     0             00        


Q ss_pred             --------------------------------------HHHHHHHHHhhcCC-CCeEEEEEeCCcccCCcCCCCCCC-CC
Q psy7936         117 --------------------------------------NILFYSILFYAIPG-KNVNVYAVHPGIVKTELGRYMDDT-YF  156 (222)
Q Consensus       117 --------------------------------------~~~~~~~la~~~~~-~gI~v~~v~PG~v~T~~~~~~~~~-~~  156 (222)
                                                            +..|+++|+.|+++ +||+||+|+||+++|+|....... ..
T Consensus       161 ~a~~p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~  240 (299)
T PRK06300        161 SHFGPIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERM  240 (299)
T ss_pred             HHHHHHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHH
Confidence                                                  78999999999987 599999999999999987543211 11


Q ss_pred             cchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccccccccccccCCCcccccCC
Q psy7936         157 PGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFPFELKGK  216 (222)
Q Consensus       157 ~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~  216 (222)
                      ........|+++  ..+|+|++..+.||+ ++...+++|+.+..++......++.+...+
T Consensus       241 ~~~~~~~~p~~r--~~~peevA~~v~~L~-s~~~~~itG~~i~vdGG~~~~~~~~~~~~~  297 (299)
T PRK06300        241 VDYYQDWAPLPE--PMEAEQVGAAAAFLV-SPLASAITGETLYVDHGANVMGIGPEMFPK  297 (299)
T ss_pred             HHHHHhcCCCCC--CcCHHHHHHHHHHHh-CccccCCCCCEEEECCCcceecCCcCcccc
Confidence            111111223444  679999999999996 555689999999666666667776665544

>KOG1205|consensus

Probab=99.94  E-value=6e-26  Score=185.15  Aligned_cols=137  Identities=29%  Similarity=0.381  Sum_probs=121.7

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           6 AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      ..++..+.||+++|||||+|||.++|.+|++.|++++++.|+..+++.+.+++++..        +..++++++||++|.
T Consensus         4 ~~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~--------~~~~v~~~~~Dvs~~   75 (282)
T KOG1205|consen    4 NLFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLG--------SLEKVLVLQLDVSDE   75 (282)
T ss_pred             cccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhC--------CcCccEEEeCccCCH
Confidence            345677899999999999999999999999999999999999999999999998864        222699999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH----------------hhh---------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI----------------LSN---------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------  116 (222)
                      +++.++++++...++++|+||||||+..                -+|                                 
T Consensus        76 ~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~  155 (282)
T KOG1205|consen   76 ESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM  155 (282)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc
Confidence            9999999999999999999999999887                001                                 


Q ss_pred             --------------HHHHHHHHHhhcCCCC--eEEEEEeCCcccCCcCCCC
Q psy7936         117 --------------NILFYSILFYAIPGKN--VNVYAVHPGIVKTELGRYM  151 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~g--I~v~~v~PG~v~T~~~~~~  151 (222)
                                    +.+|.++|+.|+.+.+  |++ +|+||+|+|++....
T Consensus       156 ~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  156 PLPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             CCCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence                          8999999999999877  666 999999999977644

>PLN02253 xanthoxin dehydrogenase

Probab=99.94  E-value=4.4e-25  Score=182.59  Aligned_cols=182  Identities=19%  Similarity=0.098  Sum_probs=141.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ...+++|+++||||++|||++++++|+++|++|++++|+.+..+++.+.+.           .+.++.++++|+++.+++
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Dl~d~~~~   81 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-----------GEPNVCFFHCDVTVEDDV   81 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-----------CCCceEEEEeecCCHHHH
Confidence            355789999999999999999999999999999999999877766665542           234788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh------------------hh----------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL------------------SN----------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l------------------~~----------------------------------  116 (222)
                      .++++.+.+.++++|++|||||....                  +|                                  
T Consensus        82 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~  161 (280)
T PLN02253         82 SRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIG  161 (280)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhccc
Confidence            99999999999999999999986420                  00                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC-cchh-hhH-------HHHHHHhcCCh
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF-PGAR-TLG-------RVLMWWWMKTP  174 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~~-~~~-------~~~~~~~~~~p  174 (222)
                                   +..+++.++.+++++||+||+|+||+++|++.....+... .... ...       .++. ....+|
T Consensus       162 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~  240 (280)
T PLN02253        162 GLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLK-GVELTV  240 (280)
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCc-CCCCCH
Confidence                         7899999999999999999999999999998653322111 1100 000       0110 114689


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +|+|+.+.|++ ++...+++|+.+..++.
T Consensus       241 ~dva~~~~~l~-s~~~~~i~G~~i~vdgG  268 (280)
T PLN02253        241 DDVANAVLFLA-SDEARYISGLNLMIDGG  268 (280)
T ss_pred             HHHHHHHHhhc-CcccccccCcEEEECCc
Confidence            99999999996 55678999999844443

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.93  E-value=1.7e-25  Score=183.00  Aligned_cols=174  Identities=21%  Similarity=0.248  Sum_probs=139.3

Q ss_pred             EEEEecCCCchHHHHHHHHHh----CCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYG----IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +++||||++|||+++|++|++    .|++|++++|+.+.++++.++++...        ++.++.++.+|+++.++++++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--------~~~~v~~~~~Dl~~~~~v~~~   73 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAER--------SGLRVVRVSLDLGAEAGLEQL   73 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcC--------CCceEEEEEeccCCHHHHHHH
Confidence            689999999999999999997    79999999999999988888886532        355788999999999999999


Q ss_pred             HHHHHhhccc----eeEEEechhhHH-----h---h-----------h--------------------------------
Q psy7936          92 AQDINQTEAN----VHILINNAVYCI-----L---S-----------N--------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~----id~li~~ag~~~-----l---~-----------~--------------------------------  116 (222)
                      ++.+.+.+++    .|++|||||...     .   .           |                                
T Consensus        74 ~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~  153 (256)
T TIGR01500        74 LKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLC  153 (256)
T ss_pred             HHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHH
Confidence            9998877654    369999999632     0   0           0                                


Q ss_pred             -----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC----CCcchhhhHHHHHHHhcCChH
Q psy7936         117 -----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT----YFPGARTLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 -----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~  175 (222)
                                       +..|+++|+.+++++||+||+|+||+++|+|.....+.    ..........|.++  +.+|+
T Consensus       154 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~  231 (256)
T TIGR01500       154 AIQPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGK--LVDPK  231 (256)
T ss_pred             hCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCC--CCCHH
Confidence                             78999999999999999999999999999997643211    11111112345555  78999


Q ss_pred             HHHHHHHHHhcCCCcccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      |+|..+++++.  ..+++||++++++
T Consensus       232 eva~~~~~l~~--~~~~~~G~~~~~~  255 (256)
T TIGR01500       232 VSAQKLLSLLE--KDKFKSGAHVDYY  255 (256)
T ss_pred             HHHHHHHHHHh--cCCcCCcceeecc
Confidence            99999999974  3579999998764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.93  E-value=2e-25  Score=182.61  Aligned_cols=177  Identities=23%  Similarity=0.251  Sum_probs=137.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|++|+++||||++|||++++++|+++|++|++++|+.. ..++.+.+..          .+.++.++++|+++.+++.+
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~   73 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRA----------AGGEALALTADLETYAGAQA   73 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHh----------cCCeEEEEEEeCCCHHHHHH
Confidence            367899999999999999999999999999999999853 4455555543          24578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH-----------------hhh-------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI-----------------LSN-------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~-----------------l~~-------------------------------------  116 (222)
                      +++++.+.++++|++|||||...                 -+|                                     
T Consensus        74 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  153 (260)
T PRK12823         74 AMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRV  153 (260)
T ss_pred             HHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCC
Confidence            99999999999999999998531                 000                                     


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCC------CCCCC--cc----hhhhHHHHHHHhcCChHH
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYM------DDTYF--PG----ARTLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~------~~~~~--~~----~~~~~~~~~~~~~~~p~e  176 (222)
                              +..|++.++.+++++||+||+|+||+++|++....      .....  ..    ......|+.+  ..+|+|
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d  231 (260)
T PRK12823        154 PYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKR--YGTIDE  231 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCccc--CCCHHH
Confidence                    78999999999999999999999999999874211      01000  00    0111234444  679999


Q ss_pred             HHHHHHHHhcCCCcccccccccccc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      +|+.+.||+ ++...+++|+.+..+
T Consensus       232 va~~~~~l~-s~~~~~~~g~~~~v~  255 (260)
T PRK12823        232 QVAAILFLA-SDEASYITGTVLPVG  255 (260)
T ss_pred             HHHHHHHHc-CcccccccCcEEeec
Confidence            999999996 445779999988443

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.2e-26  Score=184.26  Aligned_cols=175  Identities=22%  Similarity=0.187  Sum_probs=137.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.         ..         .+..+.++++|+++.++++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~---------~~---------~~~~~~~~~~D~~~~~~~~   63 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---------TV---------DGRPAEFHAADVRDPDQVA   63 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh---------hh---------cCCceEEEEccCCCHHHHH
Confidence            45789999999999999999999999999999999998764         11         2456789999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||....                +|                                     
T Consensus        64 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~  143 (252)
T PRK07856         64 ALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP  143 (252)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC
Confidence            9999999999999999999986430                00                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                 +..+++.++.++.++ |+||+|+||+++|++....... +.........|.++  ..+|+|+|+.++||
T Consensus       144 ~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~va~~~~~L  220 (252)
T PRK07856        144 GTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGR--LATPADIAWACLFL  220 (252)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCC--CcCHHHHHHHHHHH
Confidence                       689999999999888 9999999999999987543221 11111111223334  67999999999999


Q ss_pred             hcCCCccccccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYKVAKS  206 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~~~~~  206 (222)
                      + ++...++||+.|..++....
T Consensus       221 ~-~~~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        221 A-SDLASYVSGANLEVHGGGER  241 (252)
T ss_pred             c-CcccCCccCCEEEECCCcch
Confidence            6 55567999999955554433

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.3e-25  Score=183.01  Aligned_cols=180  Identities=24%  Similarity=0.238  Sum_probs=143.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-------HHHHHHHHHHhhhhhcccCCCCCeEEEEecCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-------AETTASEIRKHFEVATSEDKKPGEVLIKKLDL   82 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~   82 (222)
                      +.+++|+++||||++|||.++++.|+++|++|++++|+.+.       ++++.+.++.          .+.++.++++|+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~D~   71 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA----------AGGQALPLVGDV   71 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHh----------cCCceEEEEecC
Confidence            45688999999999999999999999999999999998653       3444444443          245788999999


Q ss_pred             CChhhHHHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------
Q psy7936          83 ASFKSIRDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------  116 (222)
Q Consensus        83 ~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------  116 (222)
                      ++.+++.++++.+.+.++++|++|||||....                +|                              
T Consensus        72 ~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  151 (273)
T PRK08278         72 RDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPL  151 (273)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCch
Confidence            99999999999998888999999999997430                00                              


Q ss_pred             -------------------HHHHHHHHHhhcCCCCeEEEEEeCC-cccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHH
Q psy7936         117 -------------------NILFYSILFYAIPGKNVNVYAVHPG-IVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 -------------------~~~~~~~la~~~~~~gI~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e  176 (222)
                                         +..++++++.++.++||+||+|+|| +++|++.+......        .+..+  +.+|++
T Consensus       152 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~--------~~~~~--~~~p~~  221 (273)
T PRK08278        152 NLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGD--------EAMRR--SRTPEI  221 (273)
T ss_pred             hccccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccccc--------ccccc--cCCHHH
Confidence                               7899999999999999999999999 68998766543211        11222  689999


Q ss_pred             HHHHHHHHhcCCCcccccccccccccccccCCCc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFP  210 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~~~~~~~~~~  210 (222)
                      +|+.+++++.. ...+++|+.+.+.++.....++
T Consensus       222 va~~~~~l~~~-~~~~~~G~~~~~~~~~~~~~~~  254 (273)
T PRK08278        222 MADAAYEILSR-PAREFTGNFLIDEEVLREAGVT  254 (273)
T ss_pred             HHHHHHHHhcC-ccccceeEEEeccchhhccCcc
Confidence            99999999644 5678999999776665554443

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.6e-25  Score=181.49  Aligned_cols=180  Identities=24%  Similarity=0.301  Sum_probs=144.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++.+|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+...          ..++.++.+|+++.++++
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~~~~   74 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE----------GGAAHVVSLDVTDYQSIK   74 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEecCCCHHHHH
Confidence            3478899999999999999999999999999999999999888887776543          446889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH---------------------------------hh-----------h---------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI---------------------------------LS-----------N---------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~---------------------------------l~-----------~---------  116 (222)
                      ++++++.+.++++|++|||+|...                                 +.           .         
T Consensus        75 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~  154 (258)
T PRK06949         75 AAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASV  154 (258)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcc
Confidence            999999888999999999999521                                 00           0         


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                                        +..+++.++.++.++||+||+|+||+++|++.................+..+  +..|+|++
T Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~  232 (258)
T PRK06949        155 AGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKR--VGKPEDLD  232 (258)
T ss_pred             cccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCC--CcCHHHHH
Confidence                              6778888999998899999999999999999775432211111111223334  78999999


Q ss_pred             HHHHHHhcCCCccccccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.+.||+ ++.+.+++|+.+..++
T Consensus       233 ~~~~~l~-~~~~~~~~G~~i~~dg  255 (258)
T PRK06949        233 GLLLLLA-ADESQFINGAIISADD  255 (258)
T ss_pred             HHHHHHh-ChhhcCCCCcEEEeCC
Confidence            9999996 4567899999995443

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.2e-25  Score=180.76  Aligned_cols=179  Identities=25%  Similarity=0.264  Sum_probs=139.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+.++++.+.+...          +.++.++++|++++++++++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~   70 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF----------PGQVLTVQMDVRNPEDVQKMVE   70 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEecCCCHHHHHHHHH
Confidence            589999999999999999999999999999999998888877777543          4578899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHH-------------------------hhh--------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCI-------------------------LSN--------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~-------------------------l~~--------------------------------  116 (222)
                      ++.+.++++|++|||+|...                         +++                                
T Consensus        71 ~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~  150 (252)
T PRK07677         71 QIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIH  150 (252)
T ss_pred             HHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcc
Confidence            99999999999999998532                         000                                


Q ss_pred             -------HHHHHHHHHhhcCC-CCeEEEEEeCCcccCCc-CCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 -------NILFYSILFYAIPG-KNVNVYAVHPGIVKTEL-GRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 -------~~~~~~~la~~~~~-~gI~v~~v~PG~v~T~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                             +..+++.|+.++.+ +||+||+|+||+++|.+ ....... ..........++++  +.+|+|+|+.+.||++
T Consensus       151 Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~~l~~  228 (252)
T PRK07677        151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGR--LGTPEEIAGLAYFLLS  228 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCC--CCCHHHHHHHHHHHcC
Confidence                   78999999999875 69999999999999643 2221111 11111111223344  7899999999999964


Q ss_pred             CCCcccccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~~~~  205 (222)
                       +...+++|+.+..++...
T Consensus       229 -~~~~~~~g~~~~~~gg~~  246 (252)
T PRK07677        229 -DEAAYINGTCITMDGGQW  246 (252)
T ss_pred             -ccccccCCCEEEECCCee
Confidence             457799999985444433

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=4.2e-25  Score=179.66  Aligned_cols=175  Identities=18%  Similarity=0.182  Sum_probs=134.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +++|+++||||++|||+++++.|+++|++|+++.+ +.+..+++...+             +.++.++++|+++.+++++
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~   69 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-------------GDRAIALQADVTDREQVQA   69 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-------------CCceEEEEcCCCCHHHHHH
Confidence            56799999999999999999999999999988765 444444433222             3478889999999999999


Q ss_pred             HHHHHHhhccc-eeEEEechhhHH---------h-------------hh-------------------------------
Q psy7936          91 CAQDINQTEAN-VHILINNAVYCI---------L-------------SN-------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~-id~li~~ag~~~---------l-------------~~-------------------------------  116 (222)
                      +++.+.+.+++ +|++|||||...         +             +|                               
T Consensus        70 ~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  149 (253)
T PRK08642         70 MFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF  149 (253)
T ss_pred             HHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc
Confidence            99999888887 999999998520         0             00                               


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                      +..+++.++.++.++||+||+|+||+++|++.................|+.+  +.+|+|+|+.
T Consensus       150 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~  227 (253)
T PRK08642        150 QNPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRK--VTTPQEFADA  227 (253)
T ss_pred             cCCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCC--CCCHHHHHHH
Confidence                            7899999999999999999999999999986543322211111112234444  7899999999


Q ss_pred             HHHHhcCCCccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.||+. +...+++|+.+..++
T Consensus       228 ~~~l~~-~~~~~~~G~~~~vdg  248 (253)
T PRK08642        228 VLFFAS-PWARAVTGQNLVVDG  248 (253)
T ss_pred             HHHHcC-chhcCccCCEEEeCC
Confidence            999964 456799999994433

>KOG1201|consensus

Probab=99.93  E-value=5.7e-25  Score=178.27  Aligned_cols=160  Identities=24%  Similarity=0.280  Sum_probs=138.0

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ...+.+|+++|||||++|+|+++|.+|+++|++++++|.|.+...+..+.+++.           +++..+.||+++.++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-----------g~~~~y~cdis~~ee  100 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-----------GEAKAYTCDISDREE  100 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-----------CceeEEEecCCCHHH
Confidence            346689999999999999999999999999999999999999999999999863           389999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHhh----------------h-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCILS----------------N-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l~----------------~-----------------------------------  116 (222)
                      +.+..+++++..|.+|++|||||+..-.                |                                   
T Consensus       101 i~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~  180 (300)
T KOG1201|consen  101 IYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP  180 (300)
T ss_pred             HHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC
Confidence            9999999999999999999999998811                0                                   


Q ss_pred             ------------HHHHHHHHHhhcC---CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIP---GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 ------------~~~~~~~la~~~~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                  ..+|+++|..|+.   ++||+..+|+|++++|.|.....+.+....           ..+|+++|+.|
T Consensus       181 ~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~~l~P-----------~L~p~~va~~I  249 (300)
T KOG1201|consen  181 AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFPTLAP-----------LLEPEYVAKRI  249 (300)
T ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCccccC-----------CCCHHHHHHHH
Confidence                        8999999998875   468999999999999999997332211111           67999999999


Q ss_pred             HHHhcCCC
Q psy7936         182 LHCALDEG  189 (222)
Q Consensus       182 ~~l~~~~~  189 (222)
                      +......+
T Consensus       250 v~ai~~n~  257 (300)
T KOG1201|consen  250 VEAILTNQ  257 (300)
T ss_pred             HHHHHcCC
Confidence            98765543

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.5e-25  Score=179.08  Aligned_cols=182  Identities=25%  Similarity=0.250  Sum_probs=145.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      |..+++|+++||||++|||.++++.|+++|++|++++|+.+.+++..+.++..          +.++.++++|+++.+++
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~   71 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA----------GGRAHAIAADLADPASV   71 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHH
Confidence            34567899999999999999999999999999999999999888887777543          45789999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      +++++.+.+.++++|++|||+|....                .|                                    
T Consensus        72 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  151 (250)
T PRK12939         72 QRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP  151 (250)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC
Confidence            99999999888999999999987420                00                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                 +..+++.++.++.+++|+|++|+||+++|++........+........+..+  +.+|+|+|+.+++++
T Consensus       152 ~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l~  229 (250)
T PRK12939        152 KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALER--LQVPDDVAGAVLFLL  229 (250)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCC--CCCHHHHHHHHHHHh
Confidence                       6788889999998899999999999999999875432111111111123333  689999999999996


Q ss_pred             cCCCcccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~~  203 (222)
                      . +..++++|+.|..++.
T Consensus       230 ~-~~~~~~~G~~i~~~gg  246 (250)
T PRK12939        230 S-DAARFVTGQLLPVNGG  246 (250)
T ss_pred             C-ccccCccCcEEEECCC
Confidence            4 4567999999965543

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.2e-25  Score=186.12  Aligned_cols=178  Identities=20%  Similarity=0.179  Sum_probs=141.8

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      +++.++++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+..           +.++..++||+++.+
T Consensus         2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-----------~~~~~~~~~Dv~d~~   70 (296)
T PRK05872          2 PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-----------DDRVLTVVADVTDLA   70 (296)
T ss_pred             CCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-----------CCcEEEEEecCCCHH
Confidence            445678899999999999999999999999999999999999988887766532           346778889999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------  116 (222)
                      ++.++++++.+.++++|++|||||+...                +|                                  
T Consensus        71 ~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~  150 (296)
T PRK05872         71 AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA  150 (296)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC
Confidence            9999999999999999999999997430                00                                  


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhH--HHHHHHhcCChHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLG--RVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~p~e~a~~i  181 (222)
                                  +..++++++.+++++||+||+|+||+++|+|....... .........  .+..+  ..+|+|+|+.+
T Consensus       151 ~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~va~~i  228 (296)
T PRK05872        151 PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRR--TTSVEKCAAAF  228 (296)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccC--CCCHHHHHHHH
Confidence                        78899999999999999999999999999998764322 111111011  12333  68999999999


Q ss_pred             HHHhcCCCccccccccc
Q psy7936         182 LHCALDEGAAKETGLYY  198 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i  198 (222)
                      ++++.. ...+++|..+
T Consensus       229 ~~~~~~-~~~~i~~~~~  244 (296)
T PRK05872        229 VDGIER-RARRVYAPRW  244 (296)
T ss_pred             HHHHhc-CCCEEEchHH
Confidence            999754 4567777654

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3e-25  Score=178.70  Aligned_cols=159  Identities=18%  Similarity=0.125  Sum_probs=132.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.++..          +.++..+.+|+++.+++++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~----------~~~~~~~~~D~~~~~~~~~   71 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL----------TDNVYSFQLKDFSQESIRH   71 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc----------CCCeEEEEccCCCHHHHHH
Confidence            468999999999999999999999999999999999999998888887653          4567889999999999999


Q ss_pred             HHHHHHhhcc-ceeEEEechhhHH----h--------h-----h------------------------------------
Q psy7936          91 CAQDINQTEA-NVHILINNAVYCI----L--------S-----N------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~-~id~li~~ag~~~----l--------~-----~------------------------------------  116 (222)
                      +++.+.+.++ ++|++|||||...    +        .     |                                    
T Consensus        72 ~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~  151 (227)
T PRK08862         72 LFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQDL  151 (227)
T ss_pred             HHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCc
Confidence            9999999988 9999999997532    0        0     0                                    


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCC-hHHHHHHHHHHhc
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKT-PEQGAQTTLHCAL  186 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~e~a~~i~~l~~  186 (222)
                               +.+|+++|+.|++++||+||+|+||+++|+...  .+.       .        +.. -+|++....||+.
T Consensus       152 ~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~--~~~-------~--------~~~~~~~~~~~~~~l~~  214 (227)
T PRK08862        152 TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL--DAV-------H--------WAEIQDELIRNTEYIVA  214 (227)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc--CHH-------H--------HHHHHHHHHhheeEEEe
Confidence                     899999999999999999999999999999322  100       0        011 2899999999974


Q ss_pred             CCCcccccccccc
Q psy7936         187 DEGAAKETGLYYS  199 (222)
Q Consensus       187 ~~~~~~~~G~~i~  199 (222)
                         ..++||..+.
T Consensus       215 ---~~~~tg~~~~  224 (227)
T PRK08862        215 ---NEYFSGRVVE  224 (227)
T ss_pred             ---cccccceEEe
Confidence               4699998763

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9e-25  Score=185.04  Aligned_cols=170  Identities=24%  Similarity=0.288  Sum_probs=137.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+.+|++|||||++|||+++++.|+++|++|++++|+.+.++++.++++..          +.++.++.+|++|.++++
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~----------g~~~~~~~~Dv~d~~~v~   72 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL----------GAEVLVVPTDVTDADQVK   72 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEeeCCCHHHHH
Confidence            4578899999999999999999999999999999999999999888888653          567889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+...                +|                                     
T Consensus        73 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~  152 (330)
T PRK06139         73 ALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPY  152 (330)
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCC
Confidence            9999998888999999999996430                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCC-CeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ----------NILFYSILFYAIPGK-NVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~-gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                +..|+++|+.|+.+. ||+|++|+||+++|++..+....  ...  ...+...  ..+|+++|+.+++++
T Consensus       153 ~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~--~~~--~~~~~~~--~~~pe~vA~~il~~~  226 (330)
T PRK06139        153 AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY--TGR--RLTPPPP--VYDPRRVAKAVVRLA  226 (330)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc--ccc--cccCCCC--CCCHHHHHHHHHHHH
Confidence                      788999999999875 99999999999999987543211  000  0001111  579999999999998


Q ss_pred             cCCCcccccc
Q psy7936         186 LDEGAAKETG  195 (222)
Q Consensus       186 ~~~~~~~~~G  195 (222)
                      .++......|
T Consensus       227 ~~~~~~~~~g  236 (330)
T PRK06139        227 DRPRATTTVG  236 (330)
T ss_pred             hCCCCEEEcC
Confidence            7765555455

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.93  E-value=3.4e-25  Score=181.05  Aligned_cols=176  Identities=27%  Similarity=0.314  Sum_probs=139.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +.+.+|+++|||+++|||.++++.|+++|++|++++|+.+..+++.+.+             ..++.++++|+++.+++.
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~   68 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-------------GPAAIAVSLDVTRQDSID   68 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-------------CCceEEEEccCCCHHHHH
Confidence            3467899999999999999999999999999999999998777665543             235788999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||....                +|                                     
T Consensus        69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  148 (257)
T PRK07067         69 RIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA  148 (257)
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC
Confidence            9999999999999999999986420                00                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-----CC-cchh----hhHHHHHHHhcCChH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-----YF-PGAR----TLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~-~~~~----~~~~~~~~~~~~~p~  175 (222)
                                 +..+++.++.++.++||+||+|.||+++|++.......     .. ....    ....|+++  +.+|+
T Consensus       149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  226 (257)
T PRK07067        149 LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGR--MGVPD  226 (257)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCC--ccCHH
Confidence                       67889999999999999999999999999986543110     00 0000    01123333  67999


Q ss_pred             HHHHHHHHHhcCCCcccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      |+|+.+.||+++ ...+++|+.+..+
T Consensus       227 dva~~~~~l~s~-~~~~~~g~~~~v~  251 (257)
T PRK07067        227 DLTGMALFLASA-DADYIVAQTYNVD  251 (257)
T ss_pred             HHHHHHHHHhCc-ccccccCcEEeec
Confidence            999999999754 5779999999443

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=3.5e-25  Score=180.81  Aligned_cols=173  Identities=27%  Similarity=0.318  Sum_probs=133.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+++|+++||||++|||+++++.|++.|++|++++++.+..   .+.+..           . .+.++.+|+++++++.+
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~-----------~-~~~~~~~Dl~~~~~~~~   68 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE-----------K-GVFTIKCDVGNRDQVKK   68 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh-----------C-CCeEEEecCCCHHHHHH
Confidence            46789999999999999999999999999999887765422   222221           1 36788999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||....                +|                                      
T Consensus        69 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~  148 (255)
T PRK06463         69 SKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEG  148 (255)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCC
Confidence            999999999999999999987430                00                                      


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc----chhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP----GARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                +..++++++.++.++||+||+|+||+++|+|.......+..    .......++++  ..+|+|+|+.++
T Consensus       149 ~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~  226 (255)
T PRK06463        149 TTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKT--TGKPEDIANIVL  226 (255)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCC--CcCHHHHHHHHH
Confidence                      78899999999999999999999999999997543221111    11111123334  679999999999


Q ss_pred             HHhcCCCcccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~  201 (222)
                      ||+ ++...+++|+.+..+
T Consensus       227 ~l~-s~~~~~~~G~~~~~d  244 (255)
T PRK06463        227 FLA-SDDARYITGQVIVAD  244 (255)
T ss_pred             HHc-ChhhcCCCCCEEEEC
Confidence            996 555679999999443

>PRK05599 hypothetical protein; Provisional

Probab=99.93  E-value=1.9e-24  Score=175.87  Aligned_cols=150  Identities=18%  Similarity=0.230  Sum_probs=128.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++++||||++|||+++|++|+ +|++|++++|+.+.++++.++++..         +...+.+++||++|.++++++++.
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~Dv~d~~~v~~~~~~   70 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQR---------GATSVHVLSFDAQDLDTHRELVKQ   70 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc---------cCCceEEEEcccCCHHHHHHHHHH
Confidence            479999999999999999999 5999999999999999988888654         233578899999999999999999


Q ss_pred             HHhhccceeEEEechhhHHh----------------hh------------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCIL----------------SN------------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l----------------~~------------------------------------------  116 (222)
                      +.+.++++|++|||||....                +|                                          
T Consensus        71 ~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y  150 (246)
T PRK05599         71 TQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVY  150 (246)
T ss_pred             HHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcch
Confidence            99999999999999997530                00                                          


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                            +..|+++|+.|+.++||+||+|+||+++|+|.....+.          +.    ..+|||+|+.+++++...
T Consensus       151 ~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~----------~~----~~~pe~~a~~~~~~~~~~  214 (246)
T PRK05599        151 GSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA----------PM----SVYPRDVAAAVVSAITSS  214 (246)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC----------CC----CCCHHHHHHHHHHHHhcC
Confidence                  88999999999999999999999999999997654321          00    368999999999997654

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.3e-24  Score=180.65  Aligned_cols=182  Identities=32%  Similarity=0.473  Sum_probs=141.7

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+++++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+.+....        ++.++.++++|+++.+
T Consensus         9 ~~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~Dl~d~~   80 (306)
T PRK06197          9 ADIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAAT--------PGADVTLQELDLTSLA   80 (306)
T ss_pred             cccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC--------CCCceEEEECCCCCHH
Confidence            34577899999999999999999999999999999999999988887777765432        3457889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH--------------hhh------------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI--------------LSN------------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~--------------l~~------------------------------------  116 (222)
                      +++++++++.+.++++|++|||||...              -+|                                    
T Consensus        81 ~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~  160 (306)
T PRK06197         81 SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA  160 (306)
T ss_pred             HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC
Confidence            999999999998999999999998642              000                                    


Q ss_pred             ------------------------HHHHHHHHHhhcCCCCeEEEEE--eCCcccCCcCCCCCCCCCcchhhhHHHHHHHh
Q psy7936         117 ------------------------NILFYSILFYAIPGKNVNVYAV--HPGIVKTELGRYMDDTYFPGARTLGRVLMWWW  170 (222)
Q Consensus       117 ------------------------~~~~~~~la~~~~~~gI~v~~v--~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  170 (222)
                                              +..+++.++.+++++||+|+++  +||+++|+|.+..+..  ...  ........+
T Consensus       161 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~--~~~--~~~~~~~~~  236 (306)
T PRK06197        161 IHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA--LRP--VATVLAPLL  236 (306)
T ss_pred             CCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH--HHH--HHHHHHhhh
Confidence                                    5778888999998888777665  7999999998765421  000  111111212


Q ss_pred             cCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         171 MKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       171 ~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ..+|++.+..+++++.++  ...+|.++.+++
T Consensus       237 ~~~~~~g~~~~~~~~~~~--~~~~g~~~~~~~  266 (306)
T PRK06197        237 AQSPEMGALPTLRAATDP--AVRGGQYYGPDG  266 (306)
T ss_pred             cCCHHHHHHHHHHHhcCC--CcCCCeEEccCc
Confidence            568899999999997655  356899996554

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.3e-25  Score=178.54  Aligned_cols=178  Identities=21%  Similarity=0.206  Sum_probs=140.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+...          +.++.++.+|+++.+++.++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~   72 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL----------GRRALAVPTDITDEDQCANL   72 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh----------CCceEEEecCCCCHHHHHHH
Confidence            57899999999999999999999999999999999998888887777542          45788999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh-----------------hh--------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL-----------------SN--------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l-----------------~~--------------------------------------  116 (222)
                      ++.+.+.++++|++|||||....                 .|                                      
T Consensus        73 ~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~  152 (258)
T PRK07890         73 VALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYG  152 (258)
T ss_pred             HHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcc
Confidence            99999999999999999986420                 00                                      


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC----------CCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT----------YFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                              +..+++.++.+++++||++|+|+||++.|++.......          ..........+..+  ..+|+|+|
T Consensus       153 ~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva  230 (258)
T PRK07890        153 AYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKR--LPTDDEVA  230 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccc--cCCHHHHH
Confidence                    78888999999999999999999999999976432110          00001001123333  67899999


Q ss_pred             HHHHHHhcCCCccccccccc-cccc
Q psy7936         179 QTTLHCALDEGAAKETGLYY-SDYK  202 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i-~~~~  202 (222)
                      +.+.+++. +...+++|+.+ .+++
T Consensus       231 ~a~~~l~~-~~~~~~~G~~i~~~gg  254 (258)
T PRK07890        231 SAVLFLAS-DLARAITGQTLDVNCG  254 (258)
T ss_pred             HHHHHHcC-HhhhCccCcEEEeCCc
Confidence            99999964 44578999988 4444

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.1e-24  Score=177.16  Aligned_cols=185  Identities=20%  Similarity=0.211  Sum_probs=143.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|++|||||++|||.++++.|+++|++|++++|+.+.++++.+.++..          +.++.++.+|+++.+++.
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~~~~   75 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA----------GRRAHVVAADLAHPEATA   75 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHHH
Confidence            4578999999999999999999999999999999999998888887777542          457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-------------------------h----------hh------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-------------------------L----------SN------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-------------------------l----------~~------------------  116 (222)
                      ++++.+.+.++++|++|||||...                         +          ..                  
T Consensus        76 ~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  155 (263)
T PRK07814         76 GLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGR  155 (263)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCC
Confidence            999999998999999999998532                         0          00                  


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                 +..+++.++.++.+ +|+||+|+||+++|++....... ..........+..+  ..+|+|+|+.++|+
T Consensus       156 ~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~~l  232 (263)
T PRK07814        156 GFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRR--LGDPEDIAAAAVYL  232 (263)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                       67788899999877 59999999999999987543211 11111101112222  57899999999999


Q ss_pred             hcCCCcccccccccccccccccCC
Q psy7936         185 ALDEGAAKETGLYYSDYKVAKSRN  208 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~~~~~~~  208 (222)
                      + ++...+++|+.+..++.....+
T Consensus       233 ~-~~~~~~~~g~~~~~~~~~~~~~  255 (263)
T PRK07814        233 A-SPAGSYLTGKTLEVDGGLTFPN  255 (263)
T ss_pred             c-CccccCcCCCEEEECCCccCCC
Confidence            6 5556789999985544433343

>PRK06196 oxidoreductase; Provisional

Probab=99.92  E-value=7.4e-24  Score=178.38  Aligned_cols=181  Identities=33%  Similarity=0.390  Sum_probs=140.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+.              .+.++++|+++.++++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~--------------~v~~~~~Dl~d~~~v~   87 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID--------------GVEVVMLDLADLESVR   87 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--------------hCeEEEccCCCHHHHH
Confidence            45789999999999999999999999999999999999888777665542              2568899999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH--------------hhh---------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI--------------LSN---------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~--------------l~~---------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+..              -+|                                       
T Consensus        88 ~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~  167 (315)
T PRK06196         88 AFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWD  167 (315)
T ss_pred             HHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCcc
Confidence            999999888899999999999642              000                                       


Q ss_pred             --------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcc--hhh-hHHHHHHHhcCC
Q psy7936         117 --------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPG--ART-LGRVLMWWWMKT  173 (222)
Q Consensus       117 --------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~  173 (222)
                                          +..+++.++.++.++||+||+|+||++.|++...........  ... ...++.. +..+
T Consensus       168 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  246 (315)
T PRK06196        168 DPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDP-GFKT  246 (315)
T ss_pred             ccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhh-hcCC
Confidence                                345677788888889999999999999999976654321110  000 1122221 2679


Q ss_pred             hHHHHHHHHHHhcCCCcccccccccccccccc
Q psy7936         174 PEQGAQTTLHCALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       174 p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      |+++|..++|+++++.....+|.|+.++....
T Consensus       247 ~~~~a~~~~~l~~~~~~~~~~g~~~~~~~~~~  278 (315)
T PRK06196        247 PAQGAATQVWAATSPQLAGMGGLYCEDCDIAE  278 (315)
T ss_pred             HhHHHHHHHHHhcCCccCCCCCeEeCCCcccc
Confidence            99999999999987766667788876655443

>KOG1207|consensus

Probab=99.92  E-value=5.1e-25  Score=164.93  Aligned_cols=172  Identities=20%  Similarity=0.204  Sum_probs=145.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+.|+.+++||+..|||++++++|++.|++|+.+.|+++.+..+.++.             ...+..++.|+++++.+.+
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-------------p~~I~Pi~~Dls~wea~~~   70 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-------------PSLIIPIVGDLSAWEALFK   70 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-------------CcceeeeEecccHHHHHHH
Confidence            468999999999999999999999999999999999999998887653             4468889999999888777


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhh------------------------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSN------------------------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~------------------------------------------------------  116 (222)
                      .+..+    +++|.++||||+..+..                                                      
T Consensus        71 ~l~~v----~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~n  146 (245)
T KOG1207|consen   71 LLVPV----FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDN  146 (245)
T ss_pred             hhccc----CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCC
Confidence            65544    79999999999877110                                                      


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc-chhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP-GARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                +.+++++||.|+++++||||+|.|..+-|+|.++...++.. ..+....|++|  ....+|+.+++.||+
T Consensus       147 HtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~r--FaEV~eVVnA~lfLL  224 (245)
T KOG1207|consen  147 HTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKR--FAEVDEVVNAVLFLL  224 (245)
T ss_pred             ceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhh--hhHHHHHHhhheeee
Confidence                      89999999999999999999999999999999987655333 23335678888  789999999999995


Q ss_pred             cCCCccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYK  202 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~  202 (222)
                       ++.+...||..+...|
T Consensus       225 -Sd~ssmttGstlpveG  240 (245)
T KOG1207|consen  225 -SDNSSMTTGSTLPVEG  240 (245)
T ss_pred             -ecCcCcccCceeeecC
Confidence             5568899999995444

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.8e-24  Score=179.03  Aligned_cols=181  Identities=23%  Similarity=0.228  Sum_probs=140.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh-HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +..+++|++|||||++|||.+++++|+++|++|++++|+.+ ..+++.+.++.          .+.++.++.+|+++.++
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~~  110 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK----------EGVKCLLIPGDVSDEAF  110 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh----------cCCeEEEEEccCCCHHH
Confidence            34678899999999999999999999999999999999863 44555555543          25578899999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh-----------------hh----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL-----------------SN----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l-----------------~~----------------------------------  116 (222)
                      +.++++++.+.++++|++|||||....                 .|                                  
T Consensus       111 ~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~  190 (290)
T PRK06701        111 CKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE  190 (290)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC
Confidence            999999999989999999999986420                 00                                  


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                 +..++++++.++.++||+|++|+||+++|++.................+..+  +.+|+|+|+.+++|+
T Consensus       191 ~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~ll  268 (290)
T PRK06701        191 TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQR--PGQPEELAPAYVFLA  268 (290)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCC--CcCHHHHHHHHHHHc
Confidence                       6899999999999999999999999999998754321111111111123333  678999999999996


Q ss_pred             cCCCccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYK  202 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~  202 (222)
                      . +...+++|+.+..++
T Consensus       269 ~-~~~~~~~G~~i~idg  284 (290)
T PRK06701        269 S-PDSSYITGQMLHVNG  284 (290)
T ss_pred             C-cccCCccCcEEEeCC
Confidence            4 456799999985443

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.1e-24  Score=174.72  Aligned_cols=182  Identities=18%  Similarity=0.112  Sum_probs=137.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC----hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD----VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      +..+++|+++||||++|||.++|+.|++.|++|++++++    .+..+++.+.++..          +.++.++++|+++
T Consensus         3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~   72 (257)
T PRK12744          3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA----------GAKAVAFQADLTT   72 (257)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh----------CCcEEEEecCcCC
Confidence            345678999999999999999999999999997776643    34455555555432          4578889999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------  116 (222)
                      +++++++++++.+.++++|++|||||...                -+|                                
T Consensus        73 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~  152 (257)
T PRK12744         73 AAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF  152 (257)
T ss_pred             HHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc
Confidence            99999999999988899999999999732                000                                


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC---cchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF---PGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                   +..++++++.++.++||+||+|+||+++|++.........   ........++......+|+|+|..
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (257)
T PRK12744        153 TPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPF  232 (257)
T ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHH
Confidence                         7889999999999999999999999999998643221111   011111223321126789999999


Q ss_pred             HHHHhcCCCccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.||+. + ..+++|+.+..++
T Consensus       233 ~~~l~~-~-~~~~~g~~~~~~g  252 (257)
T PRK12744        233 IRFLVT-D-GWWITGQTILING  252 (257)
T ss_pred             HHHhhc-c-cceeecceEeecC
Confidence            999975 3 4689999885443

>KOG4169|consensus

Probab=99.92  E-value=5.1e-25  Score=171.39  Aligned_cols=176  Identities=23%  Similarity=0.256  Sum_probs=143.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++++||.+++||+.+|||++++++|+++|..+.++..+.|+.+.. .+++...        |..++.|++||+++..+++
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~-akL~ai~--------p~~~v~F~~~DVt~~~~~~   71 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI-AKLQAIN--------PSVSVIFIKCDVTNRGDLE   71 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH-HHHhccC--------CCceEEEEEeccccHHHHH
Confidence            357899999999999999999999999999888888888775444 4455544        6789999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhh--------------h---------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILS--------------N---------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~--------------~---------------------------------------  116 (222)
                      ..++++...++.+|++||+||+..-.              |                                       
T Consensus        72 ~~f~ki~~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~  151 (261)
T KOG4169|consen   72 AAFDKILATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYA  151 (261)
T ss_pred             HHHHHHHHHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhh
Confidence            99999999999999999999998811              1                                       


Q ss_pred             -----HHHHHHHHHhh--cCCCCeEEEEEeCCcccCCcCCCCCCC-CCcc-hhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 -----NILFYSILFYA--IPGKNVNVYAVHPGIVKTELGRYMDDT-YFPG-ARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 -----~~~~~~~la~~--~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                           +..|+++||..  +.+.||++++||||++.|.|...+... .+.+ ..+....+.+....+|++++..++.+...
T Consensus       152 AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~  231 (261)
T KOG4169|consen  152 ASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEY  231 (261)
T ss_pred             hcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhh
Confidence                 78999998865  567899999999999999998877542 2221 22244445555578999999999999744


Q ss_pred             CCccccccccc
Q psy7936         188 EGAAKETGLYY  198 (222)
Q Consensus       188 ~~~~~~~G~~i  198 (222)
                          ..||+.+
T Consensus       232 ----~~NGaiw  238 (261)
T KOG4169|consen  232 ----PKNGAIW  238 (261)
T ss_pred             ----ccCCcEE
Confidence                4589888

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.2e-24  Score=174.56  Aligned_cols=179  Identities=25%  Similarity=0.202  Sum_probs=139.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.. ++.+.+...          +.++.++++|+++.+++.
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~----------~~~~~~~~~D~~~~~~~~   71 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL----------QPRAEFVQVDLTDDAQCR   71 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc----------CCceEEEEccCCCHHHHH
Confidence            458899999999999999999999999999999999998766 566666542          457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH------------------------hhh-----------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI------------------------LSN-----------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~------------------------l~~-----------------------------  116 (222)
                      ++++.+.+.++++|++|||||...                        +..                             
T Consensus        72 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~  151 (258)
T PRK08628         72 DAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTS  151 (258)
T ss_pred             HHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCc
Confidence            999999999999999999999532                        000                             


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcc----hhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPG----ARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                              +..+++.++.++.++||+||+|.||+++|++....... ....    ......+.+ ....+|+|+|+.+++
T Consensus       152 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  230 (258)
T PRK08628        152 GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLG-HRMTTAEEIADTAVF  230 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCcc-ccCCCHHHHHHHHHH
Confidence                    68899999999999999999999999999986432110 0000    000011221 126899999999999


Q ss_pred             HhcCCCcccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDY  201 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~  201 (222)
                      ++.. ...+++|+.+..+
T Consensus       231 l~~~-~~~~~~g~~~~~~  247 (258)
T PRK08628        231 LLSE-RSSHTTGQWLFVD  247 (258)
T ss_pred             HhCh-hhccccCceEEec
Confidence            9644 5678999998443

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.1e-24  Score=173.79  Aligned_cols=178  Identities=24%  Similarity=0.224  Sum_probs=138.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+++|+++||||++|||+++++.|+++|++|+++.|+. +..+++.+.+...          +.++.++.+|+++.+++.
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~   71 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA----------GGRAIAVQADVADAAAVT   71 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc----------CCeEEEEECCCCCHHHHH
Confidence            45789999999999999999999999999998887754 4456666666542          568899999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++++.+.++++|++|||||....                .|                                     
T Consensus        72 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~  151 (245)
T PRK12937         72 RLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYG  151 (245)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCc
Confidence            9999999999999999999996430                00                                     


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                              +..+++.++.++.+.||++++|+||+++|+|.................|+.+  ..+|+|+++.+.|++ ++
T Consensus       152 ~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~a~~~~~l~-~~  228 (245)
T PRK12937        152 PYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLER--LGTPEEIAAAVAFLA-GP  228 (245)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCC--CCCHHHHHHHHHHHc-Cc
Confidence                    6788889999999999999999999999998643221111111111223333  679999999999996 45


Q ss_pred             Ccccccccccccc
Q psy7936         189 GAAKETGLYYSDY  201 (222)
Q Consensus       189 ~~~~~~G~~i~~~  201 (222)
                      ...+++|.++.-+
T Consensus       229 ~~~~~~g~~~~~~  241 (245)
T PRK12937        229 DGAWVNGQVLRVN  241 (245)
T ss_pred             cccCccccEEEeC
Confidence            5679999998433

>PRK05717 oxidoreductase; Validated

Probab=99.92  E-value=2.7e-24  Score=175.60  Aligned_cols=177  Identities=19%  Similarity=0.156  Sum_probs=136.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ++.++||+++||||++|||+++|+.|+++|++|++++|+.+...++.+.+             +.++.++++|+++.+++
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~   71 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-------------GENAWFIAMDVADEAQV   71 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-------------CCceEEEEccCCCHHHH
Confidence            45678999999999999999999999999999999999887665544332             34678999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh------------------hh----------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL------------------SN----------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l------------------~~----------------------------------  116 (222)
                      .++++++.+.++++|++|||||....                  +|                                  
T Consensus        72 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~  151 (255)
T PRK05717         72 AAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE  151 (255)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC
Confidence            99999999999999999999997520                  00                                  


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..+++.++.++.+. |+||+|+||+++|++.................+.++  ..+|+|+|..+.++
T Consensus       152 ~~~~~Y~~sKaa~~~~~~~la~~~~~~-i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~~l  228 (255)
T PRK05717        152 PDTEAYAASKGGLLALTHALAISLGPE-IRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGR--VGTVEDVAAMVAWL  228 (255)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhcCC-CEEEEEecccCcCCccccccchHHHHHHhhcCCCCC--CcCHHHHHHHHHHH
Confidence                        678889999998764 999999999999997543321111000001123333  67999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      + ++...+++|+.+..++
T Consensus       229 ~-~~~~~~~~g~~~~~~g  245 (255)
T PRK05717        229 L-SRQAGFVTGQEFVVDG  245 (255)
T ss_pred             c-CchhcCccCcEEEECC
Confidence            6 4456789999885444

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.6e-24  Score=170.67  Aligned_cols=170  Identities=19%  Similarity=0.187  Sum_probs=138.3

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC--hh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS--FK   86 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~--~~   86 (222)
                      |.+|++|+++||||++|||.+++++|+++|++|++++|+.+.++++.+.+...         .+.++.++++|+++  .+
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~D~~~~~~~   71 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA---------GHPEPFAIRFDLMSAEEK   71 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc---------CCCCcceEEeeecccchH
Confidence            34578999999999999999999999999999999999999888887777653         23456788999976  56


Q ss_pred             hHHHHHHHHHhhc-cceeEEEechhhHH-----------------hhh--------------------------------
Q psy7936          87 SIRDCAQDINQTE-ANVHILINNAVYCI-----------------LSN--------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~-~~id~li~~ag~~~-----------------l~~--------------------------------  116 (222)
                      ++.++++.+.+.+ +++|++|||||...                 -+|                                
T Consensus        72 ~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~  151 (239)
T PRK08703         72 EFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE  151 (239)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc
Confidence            8888998888877 78999999999632                 000                                


Q ss_pred             ---------------HHHHHHHHHhhcCCC-CeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGK-NVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~-gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                     +..+++.++.++.++ +|+|++|.||+++|++.....+.....         +  +.++++++..
T Consensus       152 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~---------~--~~~~~~~~~~  220 (239)
T PRK08703        152 TPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKS---------E--RKSYGDVLPA  220 (239)
T ss_pred             cCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCCcc---------c--cCCHHHHHHH
Confidence                           788999999999876 699999999999999876543221111         1  5799999999


Q ss_pred             HHHHhcCCCcccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~  199 (222)
                      +.|++ ++++.++||+++.
T Consensus       221 ~~~~~-~~~~~~~~g~~~~  238 (239)
T PRK08703        221 FVWWA-SAESKGRSGEIVY  238 (239)
T ss_pred             HHHHh-CccccCcCCeEee
Confidence            99996 5678899999873

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4e-24  Score=175.70  Aligned_cols=181  Identities=20%  Similarity=0.187  Sum_probs=140.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      |+++++|+++||||++|||.++++.|++.|++|++++|+.+.+++..+.+...          +.++.++.+|+++.+++
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~i   73 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA----------GPEGLGVSADVRDYAAV   73 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------CCceEEEECCCCCHHHH
Confidence            35688999999999999999999999999999999999998887776666542          34678899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      .++++.+.+.++++|++|||||...                -+|                                    
T Consensus        74 ~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~  153 (264)
T PRK07576         74 EAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPM  153 (264)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCC
Confidence            9999999888899999999997421                000                                    


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCccc-CCcCCCCCCCCCc-chhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVK-TELGRYMDDTYFP-GARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~-T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                +..|+++++.++.++||+|++|+||+++ |++.....+.... .......|+.+  +.+|+|+|+.++++
T Consensus       154 ~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l  231 (264)
T PRK07576        154 QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKR--NGTKQDIANAALFL  231 (264)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCC--CCCHHHHHHHHHHH
Confidence                      6778999999999999999999999996 5543332211111 11101123333  67899999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      + ++...+++|+++..++
T Consensus       232 ~-~~~~~~~~G~~~~~~g  248 (264)
T PRK07576        232 A-SDMASYITGVVLPVDG  248 (264)
T ss_pred             c-ChhhcCccCCEEEECC
Confidence            7 4456799999995444

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=4.1e-24  Score=174.81  Aligned_cols=184  Identities=23%  Similarity=0.233  Sum_probs=145.0

Q ss_pred             CCCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCC
Q psy7936           4 SKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLA   83 (222)
Q Consensus         4 ~~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~   83 (222)
                      +.+....++++|+++||||++|||.++++.|+++|++|++++|+.+.++...+.+...          +.++.+++||++
T Consensus         2 ~~~~~~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~----------~~~~~~~~~Dl~   71 (259)
T PRK08213          2 MTVLELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL----------GIDALWIAADVA   71 (259)
T ss_pred             CcchhhhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEEccCC
Confidence            3455566788999999999999999999999999999999999998887777766542          457888999999


Q ss_pred             ChhhHHHHHHHHHhhccceeEEEechhhHH--------------------------------h-h---h-----------
Q psy7936          84 SFKSIRDCAQDINQTEANVHILINNAVYCI--------------------------------L-S---N-----------  116 (222)
Q Consensus        84 ~~~~v~~~~~~i~~~~~~id~li~~ag~~~--------------------------------l-~---~-----------  116 (222)
                      +.++++++++.+.+.++++|++|||||...                                . .   .           
T Consensus        72 d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~  151 (259)
T PRK08213         72 DEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVA  151 (259)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChh
Confidence            999999999999888899999999998631                                0 0   0           


Q ss_pred             ---------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChH
Q psy7936         117 ---------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 ---------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  175 (222)
                                           +..++++++.++.++||++|+|+||+++|++.....+. .........+..+  ..+|+
T Consensus       152 ~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~  228 (259)
T PRK08213        152 GLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLER-LGEDLLAHTPLGR--LGDDE  228 (259)
T ss_pred             hccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHH-HHHHHHhcCCCCC--CcCHH
Confidence                                 46778889999998999999999999999986543221 1111111222333  56899


Q ss_pred             HHHHHHHHHhcCCCcccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      |+|..+.+++ ++...+++|+.+.-+
T Consensus       229 ~va~~~~~l~-~~~~~~~~G~~~~~~  253 (259)
T PRK08213        229 DLKGAALLLA-SDASKHITGQILAVD  253 (259)
T ss_pred             HHHHHHHHHh-CccccCccCCEEEEC
Confidence            9999999996 556789999999443

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=4.8e-24  Score=173.14  Aligned_cols=178  Identities=28%  Similarity=0.283  Sum_probs=140.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+.+++++||||+++||.+++++|+++|++|++++|+.+..+++...+..           +.++.++++|+++.+++.+
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~   70 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-----------GGRAIAVAADVSDEADVEA   70 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-----------CCeEEEEECCCCCHHHHHH
Confidence            36789999999999999999999999999999999999888777666542           3468899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH--------------------------hhh----------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI--------------------------LSN----------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~--------------------------l~~----------------------------  116 (222)
                      +++.+.+.++++|++|||+|...                          +..                            
T Consensus        71 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  150 (251)
T PRK07231         71 AVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG  150 (251)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC
Confidence            99999888899999999998732                          000                            


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcc---hhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPG---ARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                +..+++.++.+++++||++++|+||+++|++...........   ......+..+  ..+|+|+|..+++
T Consensus       151 ~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~  228 (251)
T PRK07231        151 LGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGR--LGTPEDIANAALF  228 (251)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCC--CcCHHHHHHHHHH
Confidence                      678888999999888999999999999999977644311001   0101112223  5799999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      ++. +...+++|+++..++
T Consensus       229 l~~-~~~~~~~g~~~~~~g  246 (251)
T PRK07231        229 LAS-DEASWITGVTLVVDG  246 (251)
T ss_pred             HhC-ccccCCCCCeEEECC
Confidence            974 445789999884433

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.92  E-value=9.7e-25  Score=179.18  Aligned_cols=171  Identities=22%  Similarity=0.177  Sum_probs=134.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..|++|+++|||+++|||+++++.|+++|++|++++|+.+...                   ..++.++++|+++.++++
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-------------------~~~~~~~~~D~~~~~~~~   65 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-------------------HENYQFVPTDVSSAEEVN   65 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-------------------cCceEEEEccCCCHHHHH
Confidence            4578999999999999999999999999999999998875421                   236778999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh-------------------------hh----------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL-------------------------SN----------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l-------------------------~~----------------------------  116 (222)
                      ++++.+.+.++++|++|||||....                         +|                            
T Consensus        66 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  145 (266)
T PRK06171         66 HTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSS  145 (266)
T ss_pred             HHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            9999999999999999999996310                         00                            


Q ss_pred             -------------------HHHHHHHHHhhcCCCCeEEEEEeCCccc-CCcCCCCCCC-----------CCcchhhh--H
Q psy7936         117 -------------------NILFYSILFYAIPGKNVNVYAVHPGIVK-TELGRYMDDT-----------YFPGARTL--G  163 (222)
Q Consensus       117 -------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~-T~~~~~~~~~-----------~~~~~~~~--~  163 (222)
                                         +..+++.++.+++++||+||+|+||+++ |++.......           ........  .
T Consensus       146 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (266)
T PRK06171        146 EAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTST  225 (266)
T ss_pred             ccccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccc
Confidence                               6889999999999999999999999996 6664321110           00011101  3


Q ss_pred             HHHHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         164 RVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       164 ~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .|+++  +.+|+|+|..+.||+ ++...++||+.+..++
T Consensus       226 ~p~~r--~~~~~eva~~~~fl~-s~~~~~itG~~i~vdg  261 (266)
T PRK06171        226 IPLGR--SGKLSEVADLVCYLL-SDRASYITGVTTNIAG  261 (266)
T ss_pred             ccCCC--CCCHHHhhhheeeee-ccccccceeeEEEecC
Confidence            35555  789999999999996 5567899999995443

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4e-24  Score=174.92  Aligned_cols=172  Identities=25%  Similarity=0.231  Sum_probs=134.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..++++|+++||||++|||.++++.|+++|++|++++|+.+..                   ...++.++++|+++.+++
T Consensus         4 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-------------------~~~~~~~~~~D~~~~~~~   64 (260)
T PRK06523          4 FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-------------------LPEGVEFVAADLTTAEGC   64 (260)
T ss_pred             CcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-------------------cCCceeEEecCCCCHHHH
Confidence            3568899999999999999999999999999999999986521                   133677899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH------------------hhh----------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI------------------LSN----------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~------------------l~~----------------------------------  116 (222)
                      ..+++.+.+.++++|++|||||...                  .+|                                  
T Consensus        65 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~  144 (260)
T PRK06523         65 AAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP  144 (260)
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC
Confidence            9999999999999999999999531                  000                                  


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC------CCcchhh-------hHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT------YFPGART-------LGRVLMWW  169 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~------~~~~~~~-------~~~~~~~~  169 (222)
                                    +..+++.++.++.++||+||+|+||+++|++.......      .......       ...|+++ 
T Consensus       145 ~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-  223 (260)
T PRK06523        145 LPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGR-  223 (260)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCC-
Confidence                          67889999999999999999999999999986532110      0000000       0123444 


Q ss_pred             hcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         170 WMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       170 ~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                       ..+|+|+|+.+.||+ ++...+++|+.+..++
T Consensus       224 -~~~~~~va~~~~~l~-s~~~~~~~G~~~~vdg  254 (260)
T PRK06523        224 -PAEPEEVAELIAFLA-SDRAASITGTEYVIDG  254 (260)
T ss_pred             -CCCHHHHHHHHHHHh-CcccccccCceEEecC
Confidence             679999999999996 4457799999985443

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.3e-24  Score=171.99  Aligned_cols=176  Identities=26%  Similarity=0.235  Sum_probs=137.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+.+|+++||||++|||.++++.|+++|++|++++|+.+.++++.+++             +.++.++++|+++.+++..
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~   69 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-------------GESALVIRADAGDVAAQKA   69 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-------------CCceEEEEecCCCHHHHHH
Confidence            467899999999999999999999999999999999987666554433             3467889999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||...                .+|                                      
T Consensus        70 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~  149 (249)
T PRK06500         70 LAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSV  149 (249)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccH
Confidence            99999998999999999998632                000                                      


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcch----hhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGA----RTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                             +..++++++.++.++||++++|.||+++|++....... .....    .....|+.+  ..+|+|+|+.+.++
T Consensus       150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~~l  227 (249)
T PRK06500        150 YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGR--FGTPEEIAKAVLYL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                   68888999999998999999999999999987643211 11110    001112323  57999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      +. +...+++|+.+.-++
T Consensus       228 ~~-~~~~~~~g~~i~~~g  244 (249)
T PRK06500        228 AS-DESAFIVGSEIIVDG  244 (249)
T ss_pred             cC-ccccCccCCeEEECC
Confidence            65 456799999984443

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=9e-24  Score=177.26  Aligned_cols=173  Identities=20%  Similarity=0.181  Sum_probs=137.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++++|+++||||++|||+++|+.|+++|++|++.+++. +..+++.++++..          +.++.++++|+++.+++
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~----------g~~~~~~~~Dv~d~~~~   77 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA----------GAKAVAVAGDISQRATA   77 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc----------CCeEEEEeCCCCCHHHH
Confidence            568999999999999999999999999999999999854 5566777777542          56889999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH---------------------------------hh-----------h--------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI---------------------------------LS-----------N--------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~---------------------------------l~-----------~--------  116 (222)
                      .++++.+.+ ++++|++|||||+..                                 +.           .        
T Consensus        78 ~~~~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~  156 (306)
T PRK07792         78 DELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSE  156 (306)
T ss_pred             HHHHHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCc
Confidence            999999988 899999999998743                                 00           0        


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                                        +..+++.++.++.++||+||+|+||. .|.|....... ....  . .  ......+|+++|
T Consensus       157 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~-~~~~--~-~--~~~~~~~pe~va  229 (306)
T PRK07792        157 AGLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGD-APDV--E-A--GGIDPLSPEHVV  229 (306)
T ss_pred             ccccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccc-cchh--h-h--hccCCCCHHHHH
Confidence                              78889999999999999999999995 88886543211 0000  0 0  011146899999


Q ss_pred             HHHHHHhcCCCcccccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      ..+.||+ ++...+++|+++..+
T Consensus       230 ~~v~~L~-s~~~~~~tG~~~~v~  251 (306)
T PRK07792        230 PLVQFLA-SPAAAEVNGQVFIVY  251 (306)
T ss_pred             HHHHHHc-CccccCCCCCEEEEc
Confidence            9999996 545678999999443

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.6e-24  Score=172.10  Aligned_cols=180  Identities=28%  Similarity=0.301  Sum_probs=140.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      |.++++|+++||||++|||.+++++|+++|++|++++|+.+..+++.+.+...          +.++.++.+|+++.+++
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~   70 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD----------GGTAIAVQVDVSDPDSA   70 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHH
Confidence            34578899999999999999999999999999999999988777777766542          34678899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH-------------------hhh---------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI-------------------LSN---------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~-------------------l~~---------------------------------  116 (222)
                      +++++++.+.++++|++|||||+..                   .+|                                 
T Consensus        71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  150 (250)
T PRK07774         71 KAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL  150 (250)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC
Confidence            9999999999999999999999631                   000                                 


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                 +..+++.++.++.+.||++++++||+++|++.....+...........+..+  ..+|+|+++.+++++
T Consensus       151 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~a~~~~~~~  228 (250)
T PRK07774        151 YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSR--MGTPEDLVGMCLFLL  228 (250)
T ss_pred             CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHHh
Confidence                       5778899999998899999999999999998765433221111101112222  568999999999996


Q ss_pred             cCCCcccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDY  201 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~  201 (222)
                      .. ...+.+|+++..+
T Consensus       229 ~~-~~~~~~g~~~~v~  243 (250)
T PRK07774        229 SD-EASWITGQIFNVD  243 (250)
T ss_pred             Ch-hhhCcCCCEEEEC
Confidence            54 3456789888443

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.92  E-value=4.1e-24  Score=173.37  Aligned_cols=177  Identities=17%  Similarity=0.179  Sum_probs=137.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      |++|+++|||+++|||++++++|+++|++|++. +++.+...+..+.++.          .+.++..+.+|+++.+++.+
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~   70 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKA----------LGFDFIASEGNVGDWDSTKA   70 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHh----------cCCcEEEEEcCCCCHHHHHH
Confidence            468999999999999999999999999988875 4555656555555543          25578889999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++++.+.++++|++|||||....                +|                                      
T Consensus        71 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  150 (246)
T PRK12938         71 AFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ  150 (246)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCC
Confidence            999999989999999999987420                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..+++.++.++.++||++|+|+||+++|++.....+. .........+..+  ..+|+++++.+.||+++
T Consensus       151 ~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~v~~~~~~l~~~  227 (246)
T PRK12938        151 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD-VLEKIVATIPVRR--LGSPDEIGSIVAWLASE  227 (246)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChH-HHHHHHhcCCccC--CcCHHHHHHHHHHHcCc
Confidence                     56688899999999999999999999999987654321 1111101123333  67999999999999644


Q ss_pred             CCccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYK  202 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~  202 (222)
                       ...+++|+.+..++
T Consensus       228 -~~~~~~g~~~~~~~  241 (246)
T PRK12938        228 -ESGFSTGADFSLNG  241 (246)
T ss_pred             -ccCCccCcEEEECC
Confidence             56799999985443

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=4.4e-24  Score=173.46  Aligned_cols=178  Identities=24%  Similarity=0.235  Sum_probs=139.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEE-EeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIM-ACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      |++++++||||++|||++++++|+++|++|++ .+|+.+..+++.+.++..          +.++.++.+|+++.+++.+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~   71 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL----------GRKALAVKANVGDVEKIKE   71 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----------CCeEEEEEcCCCCHHHHHH
Confidence            46789999999999999999999999998776 578888888877777653          5678999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++++.+.++++|++|||||....                +|                                      
T Consensus        72 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  151 (250)
T PRK08063         72 MFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENY  151 (250)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCc
Confidence            999999999999999999985320                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc-chhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP-GARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                               +..++++++.++.+.||++|+|.||+++|++.......... .......+.++  ..+++|+|+.+++++.
T Consensus       152 ~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~~~~  229 (250)
T PRK08063        152 TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGR--MVEPEDVANAVLFLCS  229 (250)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCC--CcCHHHHHHHHHHHcC
Confidence                     78889999999988999999999999999987654321110 00001112223  6799999999999965


Q ss_pred             CCCccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYK  202 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~  202 (222)
                      + ...+++|+.+..++
T Consensus       230 ~-~~~~~~g~~~~~~g  244 (250)
T PRK08063        230 P-EADMIRGQTIIVDG  244 (250)
T ss_pred             c-hhcCccCCEEEECC
Confidence            4 45688999984433

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.92  E-value=7.2e-24  Score=172.14  Aligned_cols=176  Identities=24%  Similarity=0.212  Sum_probs=136.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEe-CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|+++||||++|||.++++.|+++|++|+++. |+.+.++++.+.++.          .+.++.+++||+++.+++.+++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~~~~~~~   71 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA----------AGGRACVVAGDVANEADVIAMF   71 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh----------cCCcEEEEEeccCCHHHHHHHH
Confidence            36899999999999999999999999988764 677777777777754          2557899999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHH----h-------------hh---------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCI----L-------------SN---------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~----l-------------~~---------------------------------------  116 (222)
                      +++.+.++++|++|||||...    +             +|                                       
T Consensus        72 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~  151 (248)
T PRK06947         72 DAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP  151 (248)
T ss_pred             HHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC
Confidence            999888899999999998642    0             00                                       


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..+++.++.++.+.||+|+.|.||+++|+|.................|..+  ..+|+++|+.++++
T Consensus       152 ~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~va~~~~~l  229 (248)
T PRK06947        152 NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGR--AGEADEVAETIVWL  229 (248)
T ss_pred             CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCC--CcCHHHHHHHHHHH
Confidence                        6788899999998899999999999999998653211111101001112223  57899999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      +. ....+++|++|..++
T Consensus       230 ~~-~~~~~~~G~~~~~~g  246 (248)
T PRK06947        230 LS-DAASYVTGALLDVGG  246 (248)
T ss_pred             cC-ccccCcCCceEeeCC
Confidence            64 456799999985543

>TIGR02415 23BDH acetoin reductases

Probab=99.92  E-value=8.7e-24  Score=172.13  Aligned_cols=175  Identities=25%  Similarity=0.210  Sum_probs=140.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |+++|||+++|||.+++++|++.|++|++++|+.+.++++.+.+..          .+.++.++.+|+++.+++.++++.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dl~~~~~i~~~~~~   70 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ----------AGGKAVAYKLDVSDKDQVFSAIDQ   70 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------cCCeEEEEEcCCCCHHHHHHHHHH
Confidence            6899999999999999999999999999999998888877777764          256788999999999999999999


Q ss_pred             HHhhccceeEEEechhhHHh----------------hh------------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCIL----------------SN------------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l----------------~~------------------------------------------  116 (222)
                      +.+.++++|++|||+|....                +|                                          
T Consensus        71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  150 (254)
T TIGR02415        71 AAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAY  150 (254)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcch
Confidence            99999999999999987430                00                                          


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc----------chhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP----------GARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                            +..+++.++.++.+.||+|++|+||+++|++..........          .......+.++  ..+|+|+++.
T Consensus       151 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~  228 (254)
T TIGR02415       151 SSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGR--PSEPEDVAGL  228 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCC--CCCHHHHHHH
Confidence                  67889999999999999999999999999997654321000          00001122333  6899999999


Q ss_pred             HHHHhcCCCccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.||+.. ...+++|+++..++
T Consensus       229 ~~~l~~~-~~~~~~g~~~~~d~  249 (254)
T TIGR02415       229 VSFLASE-DSDYITGQSILVDG  249 (254)
T ss_pred             HHhhccc-ccCCccCcEEEecC
Confidence            9999644 56789999995444

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.3e-24  Score=179.85  Aligned_cols=175  Identities=24%  Similarity=0.247  Sum_probs=137.8

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ++..+++|+++||||++|||+++++.|+++|++|++++|+.+.++++.++++..          +.++.++++|++|.++
T Consensus         2 ~~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~----------g~~~~~v~~Dv~d~~~   71 (334)
T PRK07109          2 MLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA----------GGEALAVVADVADAEA   71 (334)
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc----------CCcEEEEEecCCCHHH
Confidence            345678999999999999999999999999999999999999988888887653          5688899999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH----------------hhh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI----------------LSN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------  116 (222)
                      ++++++.+.+.++++|++|||||...                -+|                                   
T Consensus        72 v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~  151 (334)
T PRK07109         72 VQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI  151 (334)
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC
Confidence            99999999999999999999999642                000                                   


Q ss_pred             ------------HHHHHHHHHhhcCC--CCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPG--KNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~--~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                  +..|+++++.|+..  .+|+|++|+||+++|++....... . ..  ...+..+  ..+|+++|+.++
T Consensus       152 ~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~-~-~~--~~~~~~~--~~~pe~vA~~i~  225 (334)
T PRK07109        152 PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR-L-PV--EPQPVPP--IYQPEVVADAIL  225 (334)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh-c-cc--cccCCCC--CCCHHHHHHHHH
Confidence                        67888999999864  479999999999999986533210 0 00  0111222  579999999999


Q ss_pred             HHhcCCCcc-ccccccc
Q psy7936         183 HCALDEGAA-KETGLYY  198 (222)
Q Consensus       183 ~l~~~~~~~-~~~G~~i  198 (222)
                      +++..+..+ ++++...
T Consensus       226 ~~~~~~~~~~~vg~~~~  242 (334)
T PRK07109        226 YAAEHPRRELWVGGPAK  242 (334)
T ss_pred             HHHhCCCcEEEeCcHHH
Confidence            998765322 3444443

>PRK12742 oxidoreductase; Provisional

Probab=99.91  E-value=8.3e-24  Score=170.56  Aligned_cols=169  Identities=20%  Similarity=0.184  Sum_probs=127.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..+++|+++||||++|||++++++|+++|++|+++++ +.+..+++.+.+               .+.++.+|+++.+++
T Consensus         2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---------------~~~~~~~D~~~~~~~   66 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---------------GATAVQTDSADRDAV   66 (237)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---------------CCeEEecCCCCHHHH
Confidence            3577999999999999999999999999999988876 445444433221               235678999999888


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      .++++.    ++++|++|||||....                +|                                    
T Consensus        67 ~~~~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~  142 (237)
T PRK12742         67 IDVVRK----SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAG  142 (237)
T ss_pred             HHHHHH----hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCC
Confidence            777643    4789999999987430                00                                    


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..+++.++.++.++||+||+|+||+++|+|.....+  .........++.+  +.+|+|+++.+.||+ 
T Consensus       143 ~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~--~~~~~~~~~~~~~--~~~p~~~a~~~~~l~-  217 (237)
T PRK12742        143 MAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP--MKDMMHSFMAIKR--HGRPEEVAGMVAWLA-  217 (237)
T ss_pred             CcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH--HHHHHHhcCCCCC--CCCHHHHHHHHHHHc-
Confidence                      6789999999999999999999999999998654321  1111111123344  689999999999996 


Q ss_pred             CCCccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYK  202 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~  202 (222)
                      ++...+++|+.+..++
T Consensus       218 s~~~~~~~G~~~~~dg  233 (237)
T PRK12742        218 GPEASFVTGAMHTIDG  233 (237)
T ss_pred             CcccCcccCCEEEeCC
Confidence            5567899999995443

>PRK09186 flagellin modification protein A; Provisional

Probab=99.91  E-value=1.2e-23  Score=171.48  Aligned_cols=174  Identities=21%  Similarity=0.178  Sum_probs=134.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +++|+++||||++|||+++|+.|+++|++|++++|+.+.++++.+.+....        +...+.+++||+++.+++.++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~Dl~d~~~~~~~   73 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEF--------KSKKLSLVELDITDQESLEEF   73 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhc--------CCCceeEEEecCCCHHHHHHH
Confidence            468999999999999999999999999999999999998888888775432        233566779999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH----------------------------hhh---------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI----------------------------LSN---------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~----------------------------l~~---------------------------  116 (222)
                      ++.+.+.++++|++|||||...                            ++.                           
T Consensus        74 ~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  153 (256)
T PRK09186         74 LSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK  153 (256)
T ss_pred             HHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc
Confidence            9999898999999999996421                            000                           


Q ss_pred             ---------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChH
Q psy7936         117 ---------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 ---------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  175 (222)
                                           +..+++.++.++.++||+||+|+||++.+++...+     ........+..+  ..+|+
T Consensus       154 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~  226 (256)
T PRK09186        154 FEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAF-----LNAYKKCCNGKG--MLDPD  226 (256)
T ss_pred             chhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHH-----HHHHHhcCCccC--CCCHH
Confidence                                 45567788888889999999999999877642111     000001111222  68999


Q ss_pred             HHHHHHHHHhcCCCcccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      |+|+.+++++. +...+++|+++..+
T Consensus       227 dva~~~~~l~~-~~~~~~~g~~~~~~  251 (256)
T PRK09186        227 DICGTLVFLLS-DQSKYITGQNIIVD  251 (256)
T ss_pred             HhhhhHhheec-cccccccCceEEec
Confidence            99999999964 44679999998433

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.6e-23  Score=171.48  Aligned_cols=161  Identities=22%  Similarity=0.267  Sum_probs=134.1

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ++...+.+|+++||||++|||+++|+.|+++|++|++++|+.+.++++.+.+...          +.++.++++|+++.+
T Consensus        33 ~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~----------~~~~~~~~~Dl~d~~  102 (293)
T PRK05866         33 RQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA----------GGDAMAVPCDLSDLD  102 (293)
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHH
Confidence            3446678999999999999999999999999999999999999888888777543          457889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH------------------hhh--------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI------------------LSN--------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~------------------l~~--------------------------------  116 (222)
                      ++.++++.+.+.++++|++|||||...                  .+|                                
T Consensus       103 ~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  182 (293)
T PRK05866        103 AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVL  182 (293)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhc
Confidence            999999999999999999999998641                  000                                


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                      +..++++++.|+.++||+|++|+||+++|+|.......  .       .. .  ..+|+++|+.
T Consensus       183 ~~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~--~-------~~-~--~~~pe~vA~~  250 (293)
T PRK05866        183 SEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY--D-------GL-P--ALTADEAAEW  250 (293)
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc--c-------CC-C--CCCHHHHHHH
Confidence                            67889999999999999999999999999997643210  0       00 1  4699999999


Q ss_pred             HHHHhcCCC
Q psy7936         181 TLHCALDEG  189 (222)
Q Consensus       181 i~~l~~~~~  189 (222)
                      ++..+..+.
T Consensus       251 ~~~~~~~~~  259 (293)
T PRK05866        251 MVTAARTRP  259 (293)
T ss_pred             HHHHHhcCC
Confidence            999976553

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.91  E-value=1.3e-23  Score=170.03  Aligned_cols=175  Identities=28%  Similarity=0.278  Sum_probs=137.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|+++||||++|||+++++.|+++|+.|++.+|+.+.++++...+             +.++.++.+|+++.+++.
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~   68 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-------------GERVKIFPANLSDRDEVK   68 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-------------CCceEEEEccCCCHHHHH
Confidence            4578899999999999999999999999999999999988776655432             336778899999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-------------------------hhh----------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-------------------------LSN----------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-------------------------l~~----------------------------  116 (222)
                      ++++++.+.++++|++|||||...                         +..                            
T Consensus        69 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  148 (245)
T PRK12936         69 ALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG  148 (245)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC
Confidence            999999998999999999999642                         000                            


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..+++.++.++.+.||++++|+||+++|++.....+. .........+..+  ..+|+++++.+.+++ 
T Consensus       149 ~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~ia~~~~~l~-  224 (245)
T PRK12936        149 QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDK-QKEAIMGAIPMKR--MGTGAEVASAVAYLA-  224 (245)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChH-HHHHHhcCCCCCC--CcCHHHHHHHHHHHc-
Confidence                      56788899999988999999999999999987553321 0000001123333  678999999999996 


Q ss_pred             CCCcccccccccccc
Q psy7936         187 DEGAAKETGLYYSDY  201 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~  201 (222)
                      ++...+++|+.+..+
T Consensus       225 ~~~~~~~~G~~~~~~  239 (245)
T PRK12936        225 SSEAAYVTGQTIHVN  239 (245)
T ss_pred             CccccCcCCCEEEEC
Confidence            445668999988443

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.91  E-value=9.4e-24  Score=170.54  Aligned_cols=170  Identities=19%  Similarity=0.195  Sum_probs=136.0

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCC-hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      ++||||++|||.++|+.|+++|++|++++|+ .+.++++.+.++..          +.++.++++|+++.+++.++++.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~   70 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ----------GGNARLLQFDVADRVACRTLLEAD   70 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc----------CCeEEEEEccCCCHHHHHHHHHHH
Confidence            5899999999999999999999999998865 46666666666553          457899999999999999999998


Q ss_pred             HhhccceeEEEechhhHH-------------------------hhh----------------------------------
Q psy7936          96 NQTEANVHILINNAVYCI-------------------------LSN----------------------------------  116 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~-------------------------l~~----------------------------------  116 (222)
                      .+.++++|++|||+|...                         +..                                  
T Consensus        71 ~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  150 (239)
T TIGR01831        71 IAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYS  150 (239)
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchH
Confidence            888899999999998642                         000                                  


Q ss_pred             -----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcc
Q psy7936         117 -----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAA  191 (222)
Q Consensus       117 -----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~  191 (222)
                           +..++++++.++.++||+||+|+||+++|+|.....+.  ........|+.+  ..+|+|+|+.+.||+ ++.+.
T Consensus       151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~--~~~~~~va~~~~~l~-~~~~~  225 (239)
T TIGR01831       151 AAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD--LDEALKTVPMNR--MGQPAEVASLAGFLM-SDGAS  225 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH--HHHHHhcCCCCC--CCCHHHHHHHHHHHc-Cchhc
Confidence                 67788999999999999999999999999998754321  111112234444  779999999999996 55678


Q ss_pred             cccccccccc
Q psy7936         192 KETGLYYSDY  201 (222)
Q Consensus       192 ~~~G~~i~~~  201 (222)
                      +++|..+.-+
T Consensus       226 ~~~g~~~~~~  235 (239)
T TIGR01831       226 YVTRQVISVN  235 (239)
T ss_pred             CccCCEEEec
Confidence            9999988443

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.5e-23  Score=170.52  Aligned_cols=169  Identities=18%  Similarity=0.149  Sum_probs=132.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..|++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.++..          +.++.++++|+++.+++.
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~----------~~~~~~~~~Dv~d~~~v~   71 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE----------GFDVHGVMCDVRHREEVT   71 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEeCCCCCHHHHH
Confidence            4578999999999999999999999999999999999998888887777542          457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----------------hhh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----------------LSN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----------------l~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||...                -+|                                     
T Consensus        72 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~  151 (275)
T PRK05876         72 HLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA  151 (275)
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCC
Confidence            999999999999999999999642                000                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC---cc--hhhhHHHH-HHHhcCChHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF---PG--ARTLGRVL-MWWWMKTPEQGAQ  179 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~---~~--~~~~~~~~-~~~~~~~p~e~a~  179 (222)
                                 +.+|++.|+.+++++||+|++|+||+++|++.........   ..  ........ ......+|+++|+
T Consensus       152 ~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (275)
T PRK05876        152 GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQ  231 (275)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHH
Confidence                       6778999999999999999999999999998754321000   00  00000000 0111579999999


Q ss_pred             HHHHHhcCC
Q psy7936         180 TTLHCALDE  188 (222)
Q Consensus       180 ~i~~l~~~~  188 (222)
                      .++..+..+
T Consensus       232 ~~~~ai~~~  240 (275)
T PRK05876        232 LTADAILAN  240 (275)
T ss_pred             HHHHHHHcC
Confidence            999886554

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.91  E-value=1.4e-23  Score=170.73  Aligned_cols=169  Identities=22%  Similarity=0.178  Sum_probs=135.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++|++|+++||||+++||.+++++|+++|++|++++|+.         +..          .+.++.++++|+++.+++.
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~----------~~~~~~~~~~D~~~~~~~~   64 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ----------EDYPFATFVLDVSDAAAVA   64 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh----------cCCceEEEEecCCCHHHHH
Confidence            557899999999999999999999999999999999986         111          2457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||+|....                +|                                     
T Consensus        65 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~  144 (252)
T PRK08220         65 QVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIG  144 (252)
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCC
Confidence            9999999999999999999997530                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc---------chhhhHHHHHHHhcCChHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP---------GARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~p~e~  177 (222)
                                +..+++.++.+++++||+||+|.||+++|++..........         .......|..+  +.+|+|+
T Consensus       145 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dv  222 (252)
T PRK08220        145 MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGK--IARPQEI  222 (252)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcc--cCCHHHH
Confidence                      68899999999999999999999999999987643221110         01111123334  7899999


Q ss_pred             HHHHHHHhcCCCccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSD  200 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~  200 (222)
                      |+.+++|+ ++...+++|+.+.-
T Consensus       223 a~~~~~l~-~~~~~~~~g~~i~~  244 (252)
T PRK08220        223 ANAVLFLA-SDLASHITLQDIVV  244 (252)
T ss_pred             HHHHHHHh-cchhcCccCcEEEE
Confidence            99999996 44577999999843

>PRK06484 short chain dehydrogenase; Validated

Probab=99.91  E-value=1.5e-23  Score=187.48  Aligned_cols=174  Identities=25%  Similarity=0.297  Sum_probs=139.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ..+|+++|||+++|||+++|+.|+++|++|++++|+.+.++++.+++             +.++.++++|+++.++++++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~~   69 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-------------GPDHHALAMDVSDEAQIREG   69 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------CCceeEEEeccCCHHHHHHH
Confidence            46899999999999999999999999999999999988877665544             34677899999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH-----h-------------hh-------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI-----L-------------SN-------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~-----l-------------~~-------------------------------------  116 (222)
                      ++.+.+.++++|+||||||+..     +             +|                                     
T Consensus        70 ~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~  149 (520)
T PRK06484         70 FEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP  149 (520)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC
Confidence            9999999999999999999721     0             00                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC--cchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF--PGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                 +..+++.++.|+.++||+|++|+||+++|+|.........  ........+..+  ..+|+++|+.+.|
T Consensus       150 ~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~v~~  227 (520)
T PRK06484        150 KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGR--LGRPEEIAEAVFF  227 (520)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                       7899999999999999999999999999999765432111  011101122333  5699999999999


Q ss_pred             HhcCCCcccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDY  201 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~  201 (222)
                      ++.. ...+++|+.+..+
T Consensus       228 l~~~-~~~~~~G~~~~~~  244 (520)
T PRK06484        228 LASD-QASYITGSTLVVD  244 (520)
T ss_pred             HhCc-cccCccCceEEec
Confidence            9644 5679999998443

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.91  E-value=2.3e-23  Score=170.32  Aligned_cols=175  Identities=19%  Similarity=0.145  Sum_probs=137.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|++|||||+++||.++++.|+++|++|++++|+.+.++++.+.+....        +..++.++.+|+++.+++..+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~i~~~~~   73 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEY--------GEGMAYGFGADATSEQSVLALSR   73 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc--------CCceeEEEEccCCCHHHHHHHHH
Confidence            6899999999999999999999999999999999988888877766532        12478999999999999999999


Q ss_pred             HHHhhccceeEEEechhhHH----------------hhh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCI----------------LSN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------------  116 (222)
                      ++.+.++++|++|||||...                -+|                                         
T Consensus        74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~  153 (259)
T PRK12384         74 GVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSG  153 (259)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCch
Confidence            99999999999999998643                000                                         


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCc-ccCCcCCCCCCCC------Ccchh----hhHHHHHHHhcCChHHHH
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGI-VKTELGRYMDDTY------FPGAR----TLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~-v~T~~~~~~~~~~------~~~~~----~~~~~~~~~~~~~p~e~a  178 (222)
                             +..++++++.+++++||+||+|.||+ +.|++.....+..      .....    ....++.+  +.+|+|++
T Consensus       154 Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dv~  231 (259)
T PRK12384        154 YSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKR--GCDYQDVL  231 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccC--CCCHHHHH
Confidence                   77889999999999999999999996 4777765322110      00110    01223444  67999999


Q ss_pred             HHHHHHhcCCCcccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~  199 (222)
                      +.+.+|++. ...+++|+.+.
T Consensus       232 ~~~~~l~~~-~~~~~~G~~~~  251 (259)
T PRK12384        232 NMLLFYASP-KASYCTGQSIN  251 (259)
T ss_pred             HHHHHHcCc-ccccccCceEE
Confidence            999999754 56789999874

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.91  E-value=2.1e-23  Score=169.35  Aligned_cols=178  Identities=26%  Similarity=0.257  Sum_probs=140.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |++|++|||||+++||.+++++|++.|++|++++|+.+..+++.+.+...          +.++.++++|+++.++++++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~   70 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK----------GGNAQAFACDITDRDSVDTA   70 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHHHHH
Confidence            46899999999999999999999999999999999998888877777542          45788999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh----------------hh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL----------------SN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------------  116 (222)
                      ++.+.+.++++|++|||+|....                +|                                       
T Consensus        71 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~  150 (250)
T TIGR03206        71 VAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEA  150 (250)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCc
Confidence            99998888999999999985320                00                                       


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-Cc----chhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FP----GARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                              +..++++++.++.+.||+++.|+||+++|++........ ..    .......+.++  ..+|+|+|+.+.+
T Consensus       151 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~  228 (250)
T TIGR03206       151 VYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGR--LGQPDDLPGAILF  228 (250)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccC--CcCHHHHHHHHHH
Confidence                    568889999999888999999999999999876532110 00    11111122233  5789999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      ++ ++...+++|+++.-++
T Consensus       229 l~-~~~~~~~~g~~~~~~~  246 (250)
T TIGR03206       229 FS-SDDASFITGQVLSVSG  246 (250)
T ss_pred             Hc-CcccCCCcCcEEEeCC
Confidence            96 4467899999995443

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.90  E-value=2.7e-23  Score=167.71  Aligned_cols=165  Identities=17%  Similarity=0.140  Sum_probs=127.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|++|||||++|||+++++.|+++|++|++++|+.+..   .+.++..            .+.++.+|+++.+++.++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~------------~~~~~~~D~~~~~~~~~~~~   66 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA---IDGLRQA------------GAQCIQADFSTNAGIMAFID   66 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHc------------CCEEEEcCCCCHHHHHHHHH
Confidence            57999999999999999999999999999999987643   2233221            25678999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHh----------------hh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCIL----------------SN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------------  116 (222)
                      .+.+.++++|++|||||....                +|                                         
T Consensus        67 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~  146 (236)
T PRK06483         67 ELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHI  146 (236)
T ss_pred             HHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCc
Confidence            999989999999999997420                00                                         


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                              +..+++.++.++++ +|+||+|+||++.|+...   ............++.+  ..+|+|+|+.+.||++  
T Consensus       147 ~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~va~~~~~l~~--  218 (236)
T PRK06483        147 AYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD---DAAYRQKALAKSLLKI--EPGEEEIIDLVDYLLT--  218 (236)
T ss_pred             cHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCC---CHHHHHHHhccCcccc--CCCHHHHHHHHHHHhc--
Confidence                    78999999999987 499999999999775421   1111111112234444  6799999999999974  


Q ss_pred             Cccccccccccccc
Q psy7936         189 GAAKETGLYYSDYK  202 (222)
Q Consensus       189 ~~~~~~G~~i~~~~  202 (222)
                       ..++||+.+..++
T Consensus       219 -~~~~~G~~i~vdg  231 (236)
T PRK06483        219 -SCYVTGRSLPVDG  231 (236)
T ss_pred             -CCCcCCcEEEeCc
Confidence             4699999984433

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=3.6e-23  Score=169.06  Aligned_cols=175  Identities=21%  Similarity=0.149  Sum_probs=134.0

Q ss_pred             CCCCCEEEEecCCC--chHHHHHHHHHhCCCEEEEEeCC-----------hhHHHHHHHHHHHhhhhhcccCCCCCeEEE
Q psy7936          11 RLDGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMACRD-----------VEKAETTASEIRKHFEVATSEDKKPGEVLI   77 (222)
Q Consensus        11 ~~~~k~~lVtGas~--giG~~~a~~l~~~g~~v~~~~r~-----------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   77 (222)
                      .+++|+++||||++  |||.+++++|+++|++|++++|+           ......+.+.+..          .+.++.+
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~   71 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES----------YGVRCEH   71 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh----------cCCeEEE
Confidence            46789999999994  99999999999999999999988           2222223344432          2457899


Q ss_pred             EecCCCChhhHHHHHHHHHhhccceeEEEechhhHH----------------hhh-------------------------
Q psy7936          78 KKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI----------------LSN-------------------------  116 (222)
Q Consensus        78 ~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-------------------------  116 (222)
                      +++|+++.+++..+++.+.+.++++|++|||||...                .+|                         
T Consensus        72 ~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  151 (256)
T PRK12748         72 MEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIIN  151 (256)
T ss_pred             EECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEE
Confidence            999999999999999999999999999999998743                000                         


Q ss_pred             ----------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCCh
Q psy7936         117 ----------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 ----------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  174 (222)
                                            +..+++.++.++.+.||+|++|+||+++|++........    .....+..+  ..+|
T Consensus       152 ~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~----~~~~~~~~~--~~~~  225 (256)
T PRK12748        152 LTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHH----LVPKFPQGR--VGEP  225 (256)
T ss_pred             ECCccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHh----hhccCCCCC--CcCH
Confidence                                  788899999999889999999999999998754221100    001112222  5789


Q ss_pred             HHHHHHHHHHhcCCCccccccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+|+.+.+++ ++....++|+++..++
T Consensus       226 ~~~a~~~~~l~-~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        226 VDAARLIAFLV-SEEAKWITGQVIHSEG  252 (256)
T ss_pred             HHHHHHHHHHh-CcccccccCCEEEecC
Confidence            99999999996 5556789999985443

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.3e-23  Score=169.35  Aligned_cols=180  Identities=20%  Similarity=0.253  Sum_probs=141.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCE-EEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAK-VIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..+++|+++||||++|||..+++.|++.|++ |++++|+.+...+..+.+..          .+.++.++.+|+++.+++
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~D~~~~~~~   71 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA----------LGAKAVFVQADLSDVEDC   71 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHh----------cCCeEEEEEccCCCHHHH
Confidence            4578899999999999999999999999998 99999998877777666643          356788899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH-------------------------hhh---------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI-------------------------LSN---------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~-------------------------l~~---------------------------  116 (222)
                      .++++.+.+.++++|++|||+|...                         +++                           
T Consensus        72 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~  151 (260)
T PRK06198         72 RRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ  151 (260)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC
Confidence            9999999888899999999998632                         000                           


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC------CCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT------YFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                                  +..++++++.++.+.||+|++|+||++.|++.......      .+........++.+  ..+|+|++
T Consensus       152 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a  229 (260)
T PRK06198        152 PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGR--LLDPDEVA  229 (260)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccC--CcCHHHHH
Confidence                        67888999999999999999999999999985422110      11111001122333  67999999


Q ss_pred             HHHHHHhcCCCccccccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.+.+++.. ...+++|+.+..++
T Consensus       230 ~~~~~l~~~-~~~~~~G~~~~~~~  252 (260)
T PRK06198        230 RAVAFLLSD-ESGLMTGSVIDFDQ  252 (260)
T ss_pred             HHHHHHcCh-hhCCccCceEeECC
Confidence            999999654 46799999995544

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.7e-23  Score=167.51  Aligned_cols=178  Identities=27%  Similarity=0.307  Sum_probs=140.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++|+++||||+++||.+++++|+++|++|++++|+.+..++..+.+..           +.++.++++|++|.+++++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~   70 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAA-----------GGRAFARQGDVGSAEAVEA   70 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhc-----------CCeEEEEEcCCCCHHHHHH
Confidence            46799999999999999999999999999999999998877776666541           4578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||+|....                +|                                      
T Consensus        71 ~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~  150 (252)
T PRK06138         71 LVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGR  150 (252)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCc
Confidence            999999999999999999996420                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC-cchhh----hHHHHHHHhcCChHHHHHHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF-PGART----LGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~p~e~a~~i~  182 (222)
                               +..+++.++.++.+.||+|++|+||++.|++......... .....    ...+..+  +.+|+|+|+.++
T Consensus       151 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~a~~~~  228 (252)
T PRK06138        151 AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNR--FGTAEEVAQAAL  228 (252)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCC--CcCHHHHHHHHH
Confidence                     6788889999998889999999999999998765432110 11000    0112222  568999999999


Q ss_pred             HHhcCCCccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +++.. ...+++|.++..++
T Consensus       229 ~l~~~-~~~~~~g~~~~~~~  247 (252)
T PRK06138        229 FLASD-ESSFATGTTLVVDG  247 (252)
T ss_pred             HHcCc-hhcCccCCEEEECC
Confidence            99655 45789999885443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-22  Score=165.70  Aligned_cols=181  Identities=27%  Similarity=0.265  Sum_probs=141.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|+++||||+++||.++++.|+++|++|++++|+++..+++.+.++..          +.++.++++|+++.+++.
T Consensus         3 ~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~   72 (262)
T PRK13394          3 SNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA----------GGKAIGVAMDVTNEDAVN   72 (262)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc----------CceEEEEECCCCCHHHHH
Confidence            3577899999999999999999999999999999999998888888877653          557889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||....                +|                                     
T Consensus        73 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~  152 (262)
T PRK13394         73 AGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASP  152 (262)
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCC
Confidence            9999998888999999999987420                00                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc------chhhhHHHHH----HHhcCChH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP------GARTLGRVLM----WWWMKTPE  175 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~p~  175 (222)
                                 +..+++.++.++.+.||++|+|.||++.|++..........      ... ....+.    ...+.+|+
T Consensus       153 ~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  231 (262)
T PRK13394        153 LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEV-VKKVMLGKTVDGVFTTVE  231 (262)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHH-HHHHHhcCCCCCCCCCHH
Confidence                       67788889999888899999999999999986543211000      000 001110    01267999


Q ss_pred             HHHHHHHHHhcCCCccccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+++.+++++.. ....++|++|..++
T Consensus       232 dva~a~~~l~~~-~~~~~~g~~~~~~~  257 (262)
T PRK13394        232 DVAQTVLFLSSF-PSAALTGQSFVVSH  257 (262)
T ss_pred             HHHHHHHHHcCc-cccCCcCCEEeeCC
Confidence            999999999654 35678999885443

>PRK07069 short chain dehydrogenase; Validated

Probab=99.90  E-value=4.1e-23  Score=167.77  Aligned_cols=174  Identities=18%  Similarity=0.192  Sum_probs=134.1

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCC-hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      ++||||++|||.++++.|+++|++|++++|+ .+.++++.+.+....        ....+..+++|+++.+++.++++++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~   73 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAH--------GEGVAFAAVQDVTDEAQWQALLAQA   73 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC--------CCceEEEEEeecCCHHHHHHHHHHH
Confidence            7999999999999999999999999999998 677777776665431        1234667899999999999999999


Q ss_pred             HhhccceeEEEechhhHHh----------------hh-------------------------------------------
Q psy7936          96 NQTEANVHILINNAVYCIL----------------SN-------------------------------------------  116 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l----------------~~-------------------------------------------  116 (222)
                      .+.++++|++|||||....                +|                                           
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~  153 (251)
T PRK07069         74 ADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNA  153 (251)
T ss_pred             HHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHH
Confidence            9999999999999986430                00                                           


Q ss_pred             ----HHHHHHHHHhhcCCC--CeEEEEEeCCcccCCcCCCCCCC----CCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----NILFYSILFYAIPGK--NVNVYAVHPGIVKTELGRYMDDT----YFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----~~~~~~~la~~~~~~--gI~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                          +..++++++.++.++  +|+|++|+||+++|++.......    ..........+..+  +.+|+|+|+.+++|+ 
T Consensus       154 sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~~l~-  230 (251)
T PRK07069        154 SKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGR--LGEPDDVAHAVLYLA-  230 (251)
T ss_pred             HHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCC--CcCHHHHHHHHHHHc-
Confidence                788999999998765  49999999999999997643211    01011101122223  679999999999985 


Q ss_pred             CCCcccccccccccc
Q psy7936         187 DEGAAKETGLYYSDY  201 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~  201 (222)
                      ++...++||+.+..+
T Consensus       231 ~~~~~~~~g~~i~~~  245 (251)
T PRK07069        231 SDESRFVTGAELVID  245 (251)
T ss_pred             CccccCccCCEEEEC
Confidence            555779999998443

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.90  E-value=7e-23  Score=168.44  Aligned_cols=175  Identities=19%  Similarity=0.133  Sum_probs=129.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH----H
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI----R   89 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v----~   89 (222)
                      ++++||||++|||++++++|+++|++|++++| +.+.++++.+.+...         .+.++.++.+|++|.+++    .
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~Dv~d~~~~~~~~~   72 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNAR---------RPNSAVTCQADLSNSATLFSRCE   72 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhc---------cCCceEEEEccCCCchhhHHHHH
Confidence            58999999999999999999999999999865 567777777776543         245677899999999866    4


Q ss_pred             HHHHHHHhhccceeEEEechhhHH---------------------------hhh--------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI---------------------------LSN--------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~---------------------------l~~--------------------------  116 (222)
                      ++++.+.+.++++|+||||||...                           -+|                          
T Consensus        73 ~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~  152 (267)
T TIGR02685        73 AIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTN  152 (267)
T ss_pred             HHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCC
Confidence            555666677889999999998631                           000                          


Q ss_pred             ---------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHH
Q psy7936         117 ---------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWW  169 (222)
Q Consensus       117 ---------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  169 (222)
                                                 +..++++|+.|++++||+||+|+||++.|+..  +.. ..........++. .
T Consensus       153 ~~iv~~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~--~~~-~~~~~~~~~~~~~-~  228 (267)
T TIGR02685       153 LSIVNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDA--MPF-EVQEDYRRKVPLG-Q  228 (267)
T ss_pred             eEEEEehhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccc--cch-hHHHHHHHhCCCC-c
Confidence                                       78999999999999999999999999876522  111 1111110111221 1


Q ss_pred             hcCChHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         170 WMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       170 ~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ...+|+|+++.++|++ ++...+++|+.+..++.
T Consensus       229 ~~~~~~~va~~~~~l~-~~~~~~~~G~~~~v~gg  261 (267)
T TIGR02685       229 REASAEQIADVVIFLV-SPKAKYITGTCIKVDGG  261 (267)
T ss_pred             CCCCHHHHHHHHHHHh-CcccCCcccceEEECCc
Confidence            1579999999999996 45578999999854433

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=6.2e-23  Score=166.69  Aligned_cols=176  Identities=22%  Similarity=0.159  Sum_probs=140.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++++++|||+++|||..+++.|+++|++|++++|+.+.+++..+.++..          +.++.++++|+++.+++.+
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~   71 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL----------GTEVRGYAANVTDEEDVEA   71 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCceEEEEcCCCCHHHHHH
Confidence            367999999999999999999999999999999999998888877777653          5578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh-------------------------hh-----------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL-------------------------SN-----------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l-------------------------~~-----------------------------  116 (222)
                      +++.+.+.++++|++|||+|....                         +|                             
T Consensus        72 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss  151 (253)
T PRK08217         72 TFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISS  151 (253)
T ss_pred             HHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcc
Confidence            999998888899999999984210                         00                             


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                                        +..++++++.++.++||++++|+||+++|++.....+. .........+..+  ..+|+|+|
T Consensus       152 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~a  228 (253)
T PRK08217        152 IARAGNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPE-ALERLEKMIPVGR--LGEPEEIA  228 (253)
T ss_pred             ccccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHH-HHHHHHhcCCcCC--CcCHHHHH
Confidence                              67889999999988999999999999999987654321 1111111223333  57999999


Q ss_pred             HHHHHHhcCCCccccccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.+.+++.   ..+++|+.+..++
T Consensus       229 ~~~~~l~~---~~~~~g~~~~~~g  249 (253)
T PRK08217        229 HTVRFIIE---NDYVTGRVLEIDG  249 (253)
T ss_pred             HHHHHHHc---CCCcCCcEEEeCC
Confidence            99999973   3578999885444

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.2e-22  Score=167.68  Aligned_cols=181  Identities=20%  Similarity=0.193  Sum_probs=140.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|.+|++||||+++|||.++++.|+++|++|++++|+.+..++..+.+....        ...++.++++|+++.+++.+
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~Dl~~~~~~~~   75 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALK--------GAGAVRYEPADVTDEDQVAR   75 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcc--------CCCceEEEEcCCCCHHHHHH
Confidence            3678999999999999999999999999999999999888777776665431        13578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----h-------------hh-------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----L-------------SN-------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----l-------------~~-------------------------------------  116 (222)
                      +++.+.+.++++|++|||||...    +             +|                                     
T Consensus        76 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  155 (276)
T PRK05875         76 AVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW  155 (276)
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC
Confidence            99999998999999999998531    0             00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc-chhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP-GARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                +..+++.++.++.+.+|++++|.||+++|++.......... .......+..+  ..+|+|+|+.+.+++
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l~  233 (276)
T PRK05875        156 FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPR--VGEVEDVANLAMFLL  233 (276)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCC--CcCHHHHHHHHHHHc
Confidence                      67788889999998999999999999999987643221110 01101122233  568999999999996


Q ss_pred             cCCCccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYK  202 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~  202 (222)
                      .. ...+++|+++..++
T Consensus       234 ~~-~~~~~~g~~~~~~~  249 (276)
T PRK05875        234 SD-AASWITGQVINVDG  249 (276)
T ss_pred             Cc-hhcCcCCCEEEECC
Confidence            44 45688999884443

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.90  E-value=5.5e-23  Score=160.28  Aligned_cols=180  Identities=18%  Similarity=0.141  Sum_probs=144.8

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          10 SRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ..|+||++||+|-.  ++|++.||+.|.++|+++..+..++. +++-.+++.+.          .+....++||+++.++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~-l~krv~~la~~----------~~s~~v~~cDV~~d~~   70 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGER-LEKRVEELAEE----------LGSDLVLPCDVTNDES   70 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHH-HHHHHHHHHhh----------ccCCeEEecCCCCHHH
Confidence            45899999999987  79999999999999999999998884 33333333332          2346789999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH---hhh------------------------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI---LSN------------------------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~---l~~------------------------------------------------  116 (222)
                      +.++++.+.++++++|++||+.+..+   +.+                                                
T Consensus        71 i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r  150 (259)
T COG0623          71 IDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSER  150 (259)
T ss_pred             HHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEecccee
Confidence            99999999999999999999999887   000                                                


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                    +..-++.||.+++++|||||+|+-|+++|=........ ....+.....|++|  ..++||+++..
T Consensus       151 ~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r--~vt~eeVG~tA  228 (259)
T COG0623         151 VVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRR--NVTIEEVGNTA  228 (259)
T ss_pred             ecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccC--CCCHHHhhhhH
Confidence                          78889999999999999999999999999877766532 11122224457777  78999999999


Q ss_pred             HHHhcCCCcccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      .||+ ++-+..+||+.+..+..
T Consensus       229 ~fLl-SdLssgiTGei~yVD~G  249 (259)
T COG0623         229 AFLL-SDLSSGITGEIIYVDSG  249 (259)
T ss_pred             HHHh-cchhcccccceEEEcCC
Confidence            9995 66788999999944433

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.90  E-value=9.9e-23  Score=165.35  Aligned_cols=175  Identities=25%  Similarity=0.250  Sum_probs=134.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEe-CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +|++||||+++|||.+++++|+++|++|++++ |+++..+++.+.+...          +.++.+++||+++.+++.+++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~~~~~~~~~~   71 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ----------GGEALAVAADVADEADVLRLF   71 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC----------CCcEEEEEeccCCHHHHHHHH
Confidence            47899999999999999999999999988887 4556666666666542          456888999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHH----------------------------------hh------h----------------
Q psy7936          93 QDINQTEANVHILINNAVYCI----------------------------------LS------N----------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~----------------------------------l~------~----------------  116 (222)
                      +.+.+.++++|++|||||...                                  +.      .                
T Consensus        72 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  151 (248)
T PRK06123         72 EAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP  151 (248)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC
Confidence            999999999999999998752                                  00      0                


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..+++.++.++.++||+|++|.||++.|++.................|+.+  ..+|+|+++.++++
T Consensus       152 ~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~d~a~~~~~l  229 (248)
T PRK06123        152 GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGR--GGTAEEVARAILWL  229 (248)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                        5678888999998899999999999999998653221111111111123333  56899999999999


Q ss_pred             hcCCCcccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDY  201 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~  201 (222)
                      +.. ...+++|+.+..+
T Consensus       230 ~~~-~~~~~~g~~~~~~  245 (248)
T PRK06123        230 LSD-EASYTTGTFIDVS  245 (248)
T ss_pred             hCc-cccCccCCEEeec
Confidence            644 5678999988544

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.8e-22  Score=162.20  Aligned_cols=160  Identities=26%  Similarity=0.215  Sum_probs=129.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++|+++|||+++|||+.+++.|+++|++|++++|+.+..+++.+.++..          +.++.++++|+++.+++.+++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~   74 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST----------GVKAAAYSIDLSNPEAIAPGI   74 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC----------CCcEEEEEccCCCHHHHHHHH
Confidence            3579999999999999999999999999999999998887777776542          457889999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHHh----------------hh----------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCIL----------------SN----------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------------  116 (222)
                      +.+.+.++++|++|||+|....                +|                                        
T Consensus        75 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  154 (241)
T PRK07454         75 AELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGA  154 (241)
T ss_pred             HHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccH
Confidence            9999999999999999996420                00                                        


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                             +..+++.++.++.+.||++++|.||+++|++..........       ...+  +.+|+++|+.+++++..+.
T Consensus       155 Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~~~-------~~~~--~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        155 YCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQADF-------DRSA--MLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccccccccc-------cccc--CCCHHHHHHHHHHHHcCCc
Confidence                   67788889999988999999999999999986532111000       0012  6799999999999986664


Q ss_pred             cc
Q psy7936         190 AA  191 (222)
Q Consensus       190 ~~  191 (222)
                      ..
T Consensus       226 ~~  227 (241)
T PRK07454        226 SA  227 (241)
T ss_pred             cc
Confidence            43

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.90  E-value=1.8e-22  Score=164.57  Aligned_cols=178  Identities=26%  Similarity=0.210  Sum_probs=139.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |++|+++|||++++||.+++++|+++|++|++++|+.+..++..+.++..          +.++.++.||+++.+++.++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~   71 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA----------GGKAIGVAMDVTDEEAINAG   71 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHHHHH
Confidence            56799999999999999999999999999999999999888887777652          56788999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh-------------------------hh------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL-------------------------SN------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l-------------------------~~------------------------------  116 (222)
                      ++.+.+.++++|++|||||....                         ..                              
T Consensus        72 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~  151 (258)
T PRK12429         72 IDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKA  151 (258)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcc
Confidence            99999999999999999985430                         00                              


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC----Cc--chh--hh---HHHHHHHhcCChHHH
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY----FP--GAR--TL---GRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~----~~--~~~--~~---~~~~~~~~~~~p~e~  177 (222)
                              +..+++.++.++.+.||+|+++.||+++|++........    ..  ...  ..   ..+..  ...+++|+
T Consensus       152 ~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~  229 (258)
T PRK12429        152 AYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQK--RFTTVEEI  229 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCcc--ccCCHHHH
Confidence                    678889999999889999999999999998865322110    00  000  00   00111  26789999


Q ss_pred             HHHHHHHhcCCCccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+.+.+++.+ ....++|+++..++
T Consensus       230 a~~~~~l~~~-~~~~~~g~~~~~~~  253 (258)
T PRK12429        230 ADYALFLASF-AAKGVTGQAWVVDG  253 (258)
T ss_pred             HHHHHHHcCc-cccCccCCeEEeCC
Confidence            9999999644 45678999885443

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.7e-22  Score=165.35  Aligned_cols=153  Identities=28%  Similarity=0.292  Sum_probs=127.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++++++||||++|||+++++.|+++|++|++++|+.+.++++.+.+.              ++.++.+|+++.+++.+
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------------~~~~~~~D~~~~~~~~~   67 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG--------------LVVGGPLDVTDPASFAA   67 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--------------cceEEEccCCCHHHHHH
Confidence            4678999999999999999999999999999999999988776655442              45688999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||+...                +|                                      
T Consensus        68 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  147 (273)
T PRK07825         68 FLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGM  147 (273)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCC
Confidence            999999999999999999996430                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..++++++.++.+.||++++|+||+++|++........            .....+|+++|+.+++++.+
T Consensus       148 ~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~~------------~~~~~~~~~va~~~~~~l~~  215 (273)
T PRK07825        148 ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGAK------------GFKNVEPEDVAAAIVGTVAK  215 (273)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccccc------------CCCCCCHHHHHHHHHHHHhC
Confidence                     568899999999999999999999999999876542110            00157999999999999766


Q ss_pred             CC
Q psy7936         188 EG  189 (222)
Q Consensus       188 ~~  189 (222)
                      +.
T Consensus       216 ~~  217 (273)
T PRK07825        216 PR  217 (273)
T ss_pred             CC
Confidence            54

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.89  E-value=1.3e-22  Score=163.94  Aligned_cols=175  Identities=23%  Similarity=0.230  Sum_probs=135.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      |++||||+++|||.++++.|+++|++|+++.| +.+..++..+.+..          .+.++.++.+|+++++++.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~   70 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGA----------LGFDFRVVEGDVSSFESCKAAVA   70 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh----------hCCceEEEEecCCCHHHHHHHHH
Confidence            68999999999999999999999999999888 66666665555443          24578899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHH-------------------------hhh--------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCI-------------------------LSN--------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~-------------------------l~~--------------------------------  116 (222)
                      .+.+.++++|++|||+|...                         +..                                
T Consensus        71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  150 (242)
T TIGR01829        71 KVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNY  150 (242)
T ss_pred             HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchh
Confidence            99988899999999998542                         000                                


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                            +..+++.++.++.++||+++++.||+++|++.....+. .........+..+  +.+|+++++.+.|++.+ ..
T Consensus       151 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~a~~~~~l~~~-~~  226 (242)
T TIGR01829       151 SAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRED-VLNSIVAQIPVGR--LGRPEEIAAAVAFLASE-EA  226 (242)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchH-HHHHHHhcCCCCC--CcCHHHHHHHHHHHcCc-hh
Confidence                  45688889999988999999999999999987654321 1111111123333  67999999999999644 46


Q ss_pred             ccccccccccccc
Q psy7936         191 AKETGLYYSDYKV  203 (222)
Q Consensus       191 ~~~~G~~i~~~~~  203 (222)
                      .+++|+.+..++.
T Consensus       227 ~~~~G~~~~~~gg  239 (242)
T TIGR01829       227 GYITGATLSINGG  239 (242)
T ss_pred             cCccCCEEEecCC
Confidence            7899999955443

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-22  Score=166.07  Aligned_cols=173  Identities=25%  Similarity=0.228  Sum_probs=133.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|++|+++||||++|||.++++.|+++|++|++++|+....++..+.+.               ..++++|+++.+++++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~---------------~~~~~~D~~~~~~~~~   68 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG---------------GLFVPTDVTDEDAVNA   68 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---------------CcEEEeeCCCHHHHHH
Confidence            3789999999999999999999999999999999999877665544331               1478999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh------------------hh------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL------------------SN------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l------------------~~------------------------------------  116 (222)
                      +++.+.+.++++|++|||||....                  +|                                    
T Consensus        69 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~  148 (255)
T PRK06057         69 LFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA  148 (255)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC
Confidence            999998888999999999986420                  00                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcc--hhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPG--ARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                  +..+++.++.++.++||+|++|+||+++|++...........  ......|.++  ..+|+|+++.+.
T Consensus       149 ~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~  226 (255)
T PRK06057        149 TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGR--FAEPEEIAAAVA  226 (255)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHH
Confidence                        456888888899888999999999999999876542211000  0001112333  689999999999


Q ss_pred             HHhcCCCcccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~  201 (222)
                      +++.+ ...+++|+.+.-+
T Consensus       227 ~l~~~-~~~~~~g~~~~~~  244 (255)
T PRK06057        227 FLASD-DASFITASTFLVD  244 (255)
T ss_pred             HHhCc-cccCccCcEEEEC
Confidence            99654 5789999998433

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=4.9e-22  Score=161.44  Aligned_cols=169  Identities=24%  Similarity=0.269  Sum_probs=136.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCC--Chhh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLA--SFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~   87 (222)
                      ..+++|+++|||++++||.+++++|++.|++|++++|+.+..+++.++++..         ...++.++.+|++  +.++
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~d~~~~~~~~   78 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA---------GGPQPAIIPLDLLTATPQN   78 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc---------CCCCceEEEecccCCCHHH
Confidence            3468999999999999999999999999999999999998888887777654         2346677777775  7889


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh-----------------hh----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL-----------------SN----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l-----------------~~----------------------------------  116 (222)
                      ++++++.+.+.++++|++|||||....                 +|                                  
T Consensus        79 ~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~  158 (247)
T PRK08945         79 YQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG  158 (247)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC
Confidence            999999999989999999999986320                 00                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..+++.++.++...||++++|+||+++|+|.....+....         .+  ..+|+|+++.+.|
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~~---------~~--~~~~~~~~~~~~~  227 (247)
T PRK08945        159 RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGEDP---------QK--LKTPEDIMPLYLY  227 (247)
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcccc---------cC--CCCHHHHHHHHHH
Confidence                         67788889999988999999999999999976543221111         11  5799999999999


Q ss_pred             HhcCCCcccccccccc
Q psy7936         184 CALDEGAAKETGLYYS  199 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~  199 (222)
                      ++ ++...+++|+.+.
T Consensus       228 ~~-~~~~~~~~g~~~~  242 (247)
T PRK08945        228 LM-GDDSRRKNGQSFD  242 (247)
T ss_pred             Hh-CccccccCCeEEe
Confidence            96 5556799998874

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=7.4e-22  Score=159.55  Aligned_cols=159  Identities=24%  Similarity=0.295  Sum_probs=130.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++.+++++|||+++|||.+++++|+++|++|++++|+.+..+++.+++...          +.++.++++|+++.+++.
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~   72 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY----------GVKVVIATADVSDYEEVT   72 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------CCeEEEEECCCCCHHHHH
Confidence            4467899999999999999999999999999999999998888777777542          458899999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhh----------------h-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILS----------------N-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~----------------~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||+|.....                |                                     
T Consensus        73 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~  152 (239)
T PRK07666         73 AAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV  152 (239)
T ss_pred             HHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC
Confidence            99999988899999999999864300                0                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..+++.++.++.+.||++++|.||++.|++.........       .+ .  .+.+|+++|+.+..++.
T Consensus       153 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-------~~-~--~~~~~~~~a~~~~~~l~  222 (239)
T PRK07666        153 TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDG-------NP-D--KVMQPEDLAEFIVAQLK  222 (239)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccccc-------CC-C--CCCCHHHHHHHHHHHHh
Confidence                      5678889999999999999999999999998764321100       01 0  15789999999999976


Q ss_pred             CC
Q psy7936         187 DE  188 (222)
Q Consensus       187 ~~  188 (222)
                      .+
T Consensus       223 ~~  224 (239)
T PRK07666        223 LN  224 (239)
T ss_pred             CC
Confidence            54

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.2e-22  Score=161.18  Aligned_cols=177  Identities=21%  Similarity=0.204  Sum_probs=136.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..+++|+++||||++|||++++++|+++|++|++++|+. +..+.+.+.++..          +.++.++++|+++.+++
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~~~   71 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA----------GGRASAVGADLTDEESV   71 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc----------CCceEEEEcCCCCHHHH
Confidence            346789999999999999999999999999999999976 3455565555442          44678899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH-------------------hhh---------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI-------------------LSN---------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~-------------------l~~---------------------------------  116 (222)
                      .++++.+.+.++.+|++|||||...                   +..                                 
T Consensus        72 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~  151 (248)
T PRK07806         72 AALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYE  151 (248)
T ss_pred             HHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCcccc
Confidence            9999999888889999999997642                   000                                 


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchh-hhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGAR-TLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                              +..+++.++.+++++||+||+|.||++.|++...+......... ....+.++  ..+|+|+|+.+.+++.+
T Consensus       152 ~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l~~~  229 (248)
T PRK07806        152 PVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGK--LYTVSEFAAEVARAVTA  229 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcc--cCCHHHHHHHHHHHhhc
Confidence                    56778888899999999999999999999876543211111110 12234444  78999999999999853


Q ss_pred             CCcccccccccccc
Q psy7936         188 EGAAKETGLYYSDY  201 (222)
Q Consensus       188 ~~~~~~~G~~i~~~  201 (222)
                         .+++|+.+..+
T Consensus       230 ---~~~~g~~~~i~  240 (248)
T PRK07806        230 ---PVPSGHIEYVG  240 (248)
T ss_pred             ---cccCccEEEec
Confidence               47799877433

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.7e-22  Score=161.05  Aligned_cols=153  Identities=16%  Similarity=0.115  Sum_probs=123.5

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||++|||+++++.|++.|++|++++|+.++++++.+.+               .+.++++|+++.++++++++.+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~---------------~~~~~~~D~~~~~~v~~~~~~~   66 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL---------------DVDAIVCDNTDPASLEEARGLF   66 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---------------cCcEEecCCCCHHHHHHHHHHH
Confidence            4899999999999999999999999999999988776655433               2347889999999999988876


Q ss_pred             HhhccceeEEEechhhH---------Hh------------hh--------------------------------------
Q psy7936          96 NQTEANVHILINNAVYC---------IL------------SN--------------------------------------  116 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~---------~l------------~~--------------------------------------  116 (222)
                      .+   ++|++|||||..         .+            +|                                      
T Consensus        67 ~~---~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~Y~as  143 (223)
T PRK05884         67 PH---HLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENPPAGSAEAAI  143 (223)
T ss_pred             hh---cCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCCccccHHH
Confidence            43   689999998731         00            00                                      


Q ss_pred             ---HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccc
Q psy7936         117 ---NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKE  193 (222)
Q Consensus       117 ---~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~  193 (222)
                         +..|++.++.+++++||+||+|+||+++|++......          .|     ..+|+|+++.+.||+ ++...++
T Consensus       144 Kaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~~----------~p-----~~~~~~ia~~~~~l~-s~~~~~v  207 (223)
T PRK05884        144 KAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLSR----------TP-----PPVAAEIARLALFLT-TPAARHI  207 (223)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhccC----------CC-----CCCHHHHHHHHHHHc-Cchhhcc
Confidence               7899999999999999999999999999987543210          01     248999999999995 5567899


Q ss_pred             ccccccccc
Q psy7936         194 TGLYYSDYK  202 (222)
Q Consensus       194 ~G~~i~~~~  202 (222)
                      ||+.+..++
T Consensus       208 ~G~~i~vdg  216 (223)
T PRK05884        208 TGQTLHVSH  216 (223)
T ss_pred             CCcEEEeCC
Confidence            999985443

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=3e-22  Score=162.10  Aligned_cols=178  Identities=29%  Similarity=0.336  Sum_probs=141.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++.+|+++||||+++||.++++.|++.|++|+++ +|+.+..+++.+.+...          +.++.++.+|+++.+++.
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~   71 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE----------GGDAIAVKADVSSEEDVE   71 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----------CCeEEEEECCCCCHHHHH
Confidence            4678999999999999999999999999999998 99988887777776542          457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||+|....                +|                                     
T Consensus        72 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~  151 (247)
T PRK05565         72 NLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC  151 (247)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC
Confidence            9999998888999999999986420                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..+++.++.++.+.||++++|+||+++|++.+...+....... ...+..+  ..+|++++..+++++.
T Consensus       152 ~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~va~~~~~l~~  228 (247)
T PRK05565        152 EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLA-EEIPLGR--LGKPEEIAKVVLFLAS  228 (247)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHH-hcCCCCC--CCCHHHHHHHHHHHcC
Confidence                      46788889999888899999999999999987765432111000 0111222  5689999999999965


Q ss_pred             CCCccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYK  202 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~  202 (222)
                      . ....++|+++..++
T Consensus       229 ~-~~~~~~g~~~~~~~  243 (247)
T PRK05565        229 D-DASYITGQIITVDG  243 (247)
T ss_pred             C-ccCCccCcEEEecC
Confidence            5 46799999995443

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.89  E-value=2.1e-22  Score=163.37  Aligned_cols=176  Identities=25%  Similarity=0.263  Sum_probs=135.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+.+|+++||||++|||.+++++|+++|++|++..+ +.+..+++.+.+...          +.++.++++|+++.+++.
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~~~~   72 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE----------GHDVYAVQADVSKVEDAN   72 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc----------CCeEEEEECCCCCHHHHH
Confidence            467899999999999999999999999999887654 556666666666542          457899999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||....                +|                                     
T Consensus        73 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  152 (247)
T PRK12935         73 RLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFG  152 (247)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCC
Confidence            9999999999999999999987330                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..+++.++.++.+.||+++.|+||+++|++......... .......+..+  ..+|+|+++.+.+++.
T Consensus       153 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~--~~~~edva~~~~~~~~  229 (247)
T PRK12935        153 QTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVR-QKIVAKIPKKR--FGQADEIAKGVVYLCR  229 (247)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHH-HHHHHhCCCCC--CcCHHHHHHHHHHHcC
Confidence                      6778889999998889999999999999998765432100 00001111112  5799999999999974


Q ss_pred             CCCcccccccccccc
Q psy7936         187 DEGAAKETGLYYSDY  201 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~  201 (222)
                      .  ..+++|+.+..+
T Consensus       230 ~--~~~~~g~~~~i~  242 (247)
T PRK12935        230 D--GAYITGQQLNIN  242 (247)
T ss_pred             c--ccCccCCEEEeC
Confidence            3  347899888433

>PRK06182 short chain dehydrogenase; Validated

Probab=99.89  E-value=3.8e-22  Score=164.50  Aligned_cols=168  Identities=26%  Similarity=0.289  Sum_probs=127.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |++|+++|||+++|||++++++|++.|++|++++|+.+.++++.    .            ..+.++++|+++.+++.++
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~------------~~~~~~~~Dv~~~~~~~~~   64 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S------------LGVHPLSLDVTDEASIKAA   64 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h------------CCCeEEEeeCCCHHHHHHH
Confidence            35789999999999999999999999999999999987765432    1            1367889999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh----------------hh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL----------------SN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------------  116 (222)
                      ++.+.+.++++|++|||||....                +|                                       
T Consensus        65 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~  144 (273)
T PRK06182         65 VDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGA  144 (273)
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCcc
Confidence            99999999999999999986430                00                                       


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC--------CCcch-------hhhHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT--------YFPGA-------RTLGRVLMWWWMKT  173 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~--------~~~~~-------~~~~~~~~~~~~~~  173 (222)
                              +..+++.++.++.+.||+|++|+||+++|++.......        .....       .....+..+  ..+
T Consensus       145 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  222 (273)
T PRK06182        145 WYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGR--LSD  222 (273)
T ss_pred             HhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhcccc--CCC
Confidence                    77888999999999999999999999999986422110        00000       000011122  679


Q ss_pred             hHHHHHHHHHHhcCC--Ccccccccc
Q psy7936         174 PEQGAQTTLHCALDE--GAAKETGLY  197 (222)
Q Consensus       174 p~e~a~~i~~l~~~~--~~~~~~G~~  197 (222)
                      |+++|+.+++++...  ...++.|..
T Consensus       223 ~~~vA~~i~~~~~~~~~~~~~~~g~~  248 (273)
T PRK06182        223 PSVIADAISKAVTARRPKTRYAVGFG  248 (273)
T ss_pred             HHHHHHHHHHHHhCCCCCceeecCcc
Confidence            999999999997653  234555543

>PRK05855 short chain dehydrogenase; Validated

Probab=99.89  E-value=5.4e-22  Score=179.03  Aligned_cols=170  Identities=22%  Similarity=0.229  Sum_probs=135.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+.++++|||||++|||++++++|++.|++|++++|+.+.++++.+.++..          +.++.++.||+++.+++.
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~~~  380 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA----------GAVAHAYRVDVSDADAME  380 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEEcCCCCHHHHH
Confidence            4467889999999999999999999999999999999999888888887653          457899999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++++.+.++++|++|||||+...                +|                                     
T Consensus       381 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  460 (582)
T PRK05855        381 AFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR  460 (582)
T ss_pred             HHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC
Confidence            9999999999999999999998530                00                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcc--hhhhHHHH---HHHhcCChHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPG--ARTLGRVL---MWWWMKTPEQGAQT  180 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~p~e~a~~  180 (222)
                                 +..++++++.+++++||+|++|+||+++|+|...........  ........   ......+||++|+.
T Consensus       461 ~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~  540 (582)
T PRK05855        461 SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKA  540 (582)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHH
Confidence                       788999999999999999999999999999987643110000  00000000   00114689999999


Q ss_pred             HHHHhcCCC
Q psy7936         181 TLHCALDEG  189 (222)
Q Consensus       181 i~~l~~~~~  189 (222)
                      +++++..+.
T Consensus       541 ~~~~~~~~~  549 (582)
T PRK05855        541 IVDAVKRNK  549 (582)
T ss_pred             HHHHHHcCC
Confidence            999986654

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=3.6e-22  Score=162.81  Aligned_cols=178  Identities=20%  Similarity=0.207  Sum_probs=136.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|+++||||++|||.++++.|+++|++|++++|+. +..++..+.++..          +.++.++++|+++.+++.+++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~   71 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL----------GVEVIFFPADVADLSAHEAML   71 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc----------CCceEEEEecCCCHHHHHHHH
Confidence            37899999999999999999999999999999875 4455555555432          457889999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHH---------------------------h------------------hh-----------
Q psy7936          93 QDINQTEANVHILINNAVYCI---------------------------L------------------SN-----------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~---------------------------l------------------~~-----------  116 (222)
                      +.+.+.++++|++|||||...                           +                  ..           
T Consensus        72 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  151 (256)
T PRK12745         72 DAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI  151 (256)
T ss_pred             HHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc
Confidence            999999999999999998631                           0                  00           


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhh-hHHHHHHHhcCChHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGART-LGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~e~a~~  180 (222)
                                     +..+++.++.++.++||+|++|.||++.|++....... ...... ...|+.+  +.+|+|+++.
T Consensus       152 ~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~d~a~~  228 (256)
T PRK12745        152 MVSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAK-YDALIAKGLVPMPR--WGEPEDVARA  228 (256)
T ss_pred             cCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchh-HHhhhhhcCCCcCC--CcCHHHHHHH
Confidence                           67788888998888999999999999999987643211 111100 0122333  6789999999


Q ss_pred             HHHHhcCCCcccccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      +.+++ ++...+++|..+..++...
T Consensus       229 i~~l~-~~~~~~~~G~~~~i~gg~~  252 (256)
T PRK12745        229 VAALA-SGDLPYSTGQAIHVDGGLS  252 (256)
T ss_pred             HHHHh-CCcccccCCCEEEECCCee
Confidence            99996 4456789999986555433

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.8e-22  Score=161.93  Aligned_cols=178  Identities=24%  Similarity=0.294  Sum_probs=135.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++.+++++||||++|||.++|++|+++|+.|+++ .|+.+.+++..+.+...          +.++.++++|+++.+++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~d~~~i   71 (254)
T PRK12746          2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN----------GGKAFLIEADLNSIDGV   71 (254)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----------CCcEEEEEcCcCCHHHH
Confidence            44678999999999999999999999999988775 78887777776666432          45788999999999999


Q ss_pred             HHHHHHHHhhc------cceeEEEechhhHHh----------------hh------------------------------
Q psy7936          89 RDCAQDINQTE------ANVHILINNAVYCIL----------------SN------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~------~~id~li~~ag~~~l----------------~~------------------------------  116 (222)
                      .++++++.+.+      +++|++|||||....                .|                              
T Consensus        72 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~  151 (254)
T PRK12746         72 KKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR  151 (254)
T ss_pred             HHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc
Confidence            99999988776      479999999987430                00                              


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-CcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                     +..+++.++.++.++|++|++|+||+++|++........ .........++++  ..+++|+|+.
T Consensus       152 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~  229 (254)
T PRK12746        152 LGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGR--IGQVEDIADA  229 (254)
T ss_pred             CCCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCC--CCCHHHHHHH
Confidence                           667788888998889999999999999999876543211 1111101112233  6789999999


Q ss_pred             HHHHhcCCCccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSD  200 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~  200 (222)
                      +.+++. +...+++|+.+.-
T Consensus       230 ~~~l~~-~~~~~~~g~~~~i  248 (254)
T PRK12746        230 VAFLAS-SDSRWVTGQIIDV  248 (254)
T ss_pred             HHHHcC-cccCCcCCCEEEe
Confidence            999864 4456788987743

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.1e-22  Score=164.32  Aligned_cols=171  Identities=22%  Similarity=0.252  Sum_probs=133.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |+++||||++|||+++++.|+++|++|++++|+.+.++++.+++...         +...+.++.+|+++.+++.+++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~   71 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARAL---------GGTVPEHRALDISDYDAVAAFAAD   71 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------CCCcceEEEeeCCCHHHHHHHHHH
Confidence            57999999999999999999999999999999998888887777653         233456689999999999999999


Q ss_pred             HHhhccceeEEEechhhHHh----------------hh------------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCIL----------------SN------------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l----------------~~------------------------------------------  116 (222)
                      +.+.++++|++|||+|....                +|                                          
T Consensus        72 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y  151 (272)
T PRK07832         72 IHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAY  151 (272)
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcch
Confidence            98889999999999986420                00                                          


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC------CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT------YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                            +..+++.++.++.++||+|++|+||+++|++.......      +..... .....++  ..+|+++|..++++
T Consensus       152 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~vA~~~~~~  228 (272)
T PRK07832        152 SASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKW-VDRFRGH--AVTPEKAAEKILAG  228 (272)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHH-HHhcccC--CCCHHHHHHHHHHH
Confidence                  67899999999999999999999999999987653211      000111 0111122  58999999999999


Q ss_pred             hcCCCcccccccccc
Q psy7936         185 ALDEGAAKETGLYYS  199 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~  199 (222)
                      +..  .+++++..+.
T Consensus       229 ~~~--~~~~~~~~~~  241 (272)
T PRK07832        229 VEK--NRYLVYTSPD  241 (272)
T ss_pred             Hhc--CCeEEecCcc
Confidence            743  3567776553

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.89  E-value=3.6e-22  Score=183.25  Aligned_cols=184  Identities=22%  Similarity=0.209  Sum_probs=141.3

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ...+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+....        ...++..+++|+++.+++
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~--------~~~~~~~v~~Dvtd~~~v  480 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQF--------GAGRAVALKMDVTDEQAV  480 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhc--------CCCcEEEEECCCCCHHHH
Confidence            355789999999999999999999999999999999999988887777765432        234678899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      .++++++.+.++++|++|||||....                +|                                    
T Consensus       481 ~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~  560 (676)
T TIGR02632       481 KAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG  560 (676)
T ss_pred             HHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC
Confidence            99999999999999999999997430                00                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccC--CcCCCCCCCCC-------cch----hhhHHHHHHHhc
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKT--ELGRYMDDTYF-------PGA----RTLGRVLMWWWM  171 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T--~~~~~~~~~~~-------~~~----~~~~~~~~~~~~  171 (222)
                                  +..+++.++.+++++||+||+|+||++.|  .+.........       ...    .....++++  .
T Consensus       561 ~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r--~  638 (676)
T TIGR02632       561 KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKR--H  638 (676)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCC--C
Confidence                        68889999999999999999999999864  33221110000       000    001123333  6


Q ss_pred             CChHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         172 KTPEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       172 ~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      .+|+|+|+.+.+++.+ ...++||+++..++.
T Consensus       639 v~peDVA~av~~L~s~-~~~~~TG~~i~vDGG  669 (676)
T TIGR02632       639 IFPADIAEAVFFLASS-KSEKTTGCIITVDGG  669 (676)
T ss_pred             cCHHHHHHHHHHHhCC-cccCCcCcEEEECCC
Confidence            7999999999999644 467899999955443

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.5e-22  Score=161.00  Aligned_cols=154  Identities=17%  Similarity=0.163  Sum_probs=127.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhH-HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEK-AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++++||||++|||+++|++|+++| ++|++++|+.+. ++++.++++..         +..++.++++|+++.+++.+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~---------~~~~v~~~~~D~~~~~~~~~   77 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA---------GASSVEVIDFDALDTDSHPK   77 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc---------CCCceEEEEecCCChHHHHH
Confidence            57899999999999999999999995 899999999886 88887777653         23478999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++++.+ .+++|++|||+|...                -+|                                      
T Consensus        78 ~~~~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~  156 (253)
T PRK07904         78 VIDAAFA-GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSN  156 (253)
T ss_pred             HHHHHHh-cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCC
Confidence            9998876 489999999998752                000                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..|+++++.++.++||+|++|+||+++|++.......          +  .  ..+|+++|+.++..+..
T Consensus       157 ~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~----------~--~--~~~~~~~A~~i~~~~~~  222 (253)
T PRK07904        157 FVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEA----------P--L--TVDKEDVAKLAVTAVAK  222 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCC----------C--C--CCCHHHHHHHHHHHHHc
Confidence                     67888999999999999999999999999988754321          0  0  46899999999999765


Q ss_pred             CCc
Q psy7936         188 EGA  190 (222)
Q Consensus       188 ~~~  190 (222)
                      +..
T Consensus       223 ~~~  225 (253)
T PRK07904        223 GKE  225 (253)
T ss_pred             CCC
Confidence            543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.89  E-value=5.7e-22  Score=167.36  Aligned_cols=179  Identities=26%  Similarity=0.319  Sum_probs=133.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|+++||||++|||.++++.|+++|++|++++|+.+.++++.+.+..          ++.++.++++|+++.++++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dl~~~~~v~   71 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI----------PPDSYTIIHIDLGDLDSVR   71 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc----------cCCceEEEEecCCCHHHHH
Confidence            445789999999999999999999999999999999999988887777643          2457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-----------------hhh------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-----------------LSN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-----------------l~~------------------------------------  116 (222)
                      ++++.+.+..+++|++|||||+..                 -+|                                    
T Consensus        72 ~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~  151 (322)
T PRK07453         72 RFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPK  151 (322)
T ss_pred             HHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCcc
Confidence            999998877789999999999531                 000                                    


Q ss_pred             ------------------------------------------------HHHHHHHHHhhcC-CCCeEEEEEeCCcc-cCC
Q psy7936         117 ------------------------------------------------NILFYSILFYAIP-GKNVNVYAVHPGIV-KTE  146 (222)
Q Consensus       117 ------------------------------------------------~~~~~~~la~~~~-~~gI~v~~v~PG~v-~T~  146 (222)
                                                                      +..+++.+++++. .+||+|++|+||+| .|+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        152 ELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             ccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence                                                            1233455666663 36899999999999 699


Q ss_pred             cCCCCCCCCCcchhh--hHHHHHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         147 LGRYMDDTYFPGART--LGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       147 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.++....  .....  ...... ....++++.+..+++++.++.. ..+|.|+.++.
T Consensus       232 ~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~G~y~~~~~  285 (322)
T PRK07453        232 LFRNTPPL--FQKLFPWFQKNIT-GGYVSQELAGERVAQVVADPEF-AQSGVHWSWGN  285 (322)
T ss_pred             ccccCCHH--HHHHHHHHHHHHh-hceecHHHHhhHHHHhhcCccc-CCCCceeecCC
Confidence            87654321  10100  011111 1136889999999999887754 46999997543

>PLN00015 protochlorophyllide reductase

Probab=99.89  E-value=2.6e-22  Score=168.51  Aligned_cols=170  Identities=25%  Similarity=0.319  Sum_probs=130.1

Q ss_pred             EEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHH
Q psy7936          18 IITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDIN   96 (222)
Q Consensus        18 lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~   96 (222)
                      |||||++|||++++++|+++| ++|++++|+.+.++++.+.++.          .+.++.++++|+++.++++++++.+.
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dl~d~~~v~~~~~~~~   70 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM----------PKDSYTVMHLDLASLDSVRQFVDNFR   70 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC----------CCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            699999999999999999999 9999999999888777766643          24578889999999999999999998


Q ss_pred             hhccceeEEEechhhHH-----------------hhh-------------------------------------------
Q psy7936          97 QTEANVHILINNAVYCI-----------------LSN-------------------------------------------  116 (222)
Q Consensus        97 ~~~~~id~li~~ag~~~-----------------l~~-------------------------------------------  116 (222)
                      +.++++|++|||||+..                 -+|                                           
T Consensus        71 ~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~  150 (308)
T PLN00015         71 RSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVP  150 (308)
T ss_pred             hcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCC
Confidence            88899999999999742                 000                                           


Q ss_pred             -----------------------------------------HHHHHHHHHhhcCC-CCeEEEEEeCCcc-cCCcCCCCCC
Q psy7936         117 -----------------------------------------NILFYSILFYAIPG-KNVNVYAVHPGIV-KTELGRYMDD  153 (222)
Q Consensus       117 -----------------------------------------~~~~~~~la~~~~~-~gI~v~~v~PG~v-~T~~~~~~~~  153 (222)
                                                               ++.+++.++.++.+ .||+||+|+||+| +|+|.+....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~  230 (308)
T PLN00015        151 PKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIP  230 (308)
T ss_pred             CccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccH
Confidence                                                     12344667777754 6999999999999 7999765332


Q ss_pred             CCCcchh---hhHHHHHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         154 TYFPGAR---TLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       154 ~~~~~~~---~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .  ....   ....+.++  ..+|+++|+.+++++++. ..+.+|+|+.+++
T Consensus       231 ~--~~~~~~~~~~~~~~~--~~~pe~~a~~~~~l~~~~-~~~~~G~~~~~~g  277 (308)
T PLN00015        231 L--FRLLFPPFQKYITKG--YVSEEEAGKRLAQVVSDP-SLTKSGVYWSWNG  277 (308)
T ss_pred             H--HHHHHHHHHHHHhcc--cccHHHhhhhhhhhcccc-ccCCCccccccCC
Confidence            1  1100   01112222  579999999999997665 4568999997654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.89  E-value=6.3e-22  Score=160.57  Aligned_cols=177  Identities=25%  Similarity=0.306  Sum_probs=138.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +.+|+++||||+++||.+++++|+++|++|++++|+.+...+..+.+...          +.++.++.+|+++.+++.++
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~~~~~~~~~   73 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA----------GGKARARQVDVRDRAALKAA   73 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEECCCCCHHHHHHH
Confidence            56789999999999999999999999999999999988877777776543          45688999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh----------------hh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL----------------SN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------------  116 (222)
                      ++.+.+.++++|++|||+|....                .|                                       
T Consensus        74 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~  153 (251)
T PRK12826         74 VAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGL  153 (251)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCc
Confidence            99999999999999999976430                00                                       


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..+++.++.++.+.|++++.+.||++.|++.................|+.+  +.+++|+|+.+.+++ +
T Consensus       154 ~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l~-~  230 (251)
T PRK12826        154 AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGR--LGEPEDIAAAVLFLA-S  230 (251)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCC--CcCHHHHHHHHHHHh-C
Confidence                     3556677888887889999999999999998665432111111111123333  679999999999986 4


Q ss_pred             CCcccccccccccc
Q psy7936         188 EGAAKETGLYYSDY  201 (222)
Q Consensus       188 ~~~~~~~G~~i~~~  201 (222)
                      ....+++|+.+..+
T Consensus       231 ~~~~~~~g~~~~~~  244 (251)
T PRK12826        231 DEARYITGQTLPVD  244 (251)
T ss_pred             ccccCcCCcEEEEC
Confidence            44568899998544

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=2.1e-22  Score=177.37  Aligned_cols=174  Identities=21%  Similarity=0.206  Sum_probs=134.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh--hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV--EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ..+.+++++|||+++|||.++++.|+++|++|+++++..  +.++++.+.+               ...++.+|+++.++
T Consensus       206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---------------~~~~~~~Dv~~~~~  270 (450)
T PRK08261        206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---------------GGTALALDITAPDA  270 (450)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---------------CCeEEEEeCCCHHH
Confidence            446789999999999999999999999999999998843  3333332221               12467899999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH----------------hhh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI----------------LSN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------  116 (222)
                      +.++++.+.+.++++|++|||||+..                -+|                                   
T Consensus       271 ~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~  350 (450)
T PRK08261        271 PARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN  350 (450)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC
Confidence            99999999988899999999999642                000                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..|+++++.++.++||++|+|+||+++|+|....+... ........++.+  ...|+|+|+.+.||
T Consensus       351 ~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~-~~~~~~~~~l~~--~~~p~dva~~~~~l  427 (450)
T PRK08261        351 RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFAT-REAGRRMNSLQQ--GGLPVDVAETIAWL  427 (450)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhH-HHHHhhcCCcCC--CCCHHHHHHHHHHH
Confidence                        677999999999999999999999999999887553210 010001122333  57899999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      + ++.+.++||+.+..++
T Consensus       428 ~-s~~~~~itG~~i~v~g  444 (450)
T PRK08261        428 A-SPASGGVTGNVVRVCG  444 (450)
T ss_pred             h-ChhhcCCCCCEEEECC
Confidence            6 5667899999995444

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.88  E-value=1.2e-21  Score=164.89  Aligned_cols=185  Identities=26%  Similarity=0.288  Sum_probs=136.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +|+++||||++|||++++++|+++| ++|++++|+.+.++++.+.+..          .+.++.++.+|+++.+++++++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dl~~~~~v~~~~   72 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM----------PKDSYTIMHLDLGSLDSVRQFV   72 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC----------CCCeEEEEEcCCCCHHHHHHHH
Confidence            6899999999999999999999999 9999999999888877776642          2457888999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHH----------------------------------hh-----------------------
Q psy7936          93 QDINQTEANVHILINNAVYCI----------------------------------LS-----------------------  115 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~----------------------------------l~-----------------------  115 (222)
                      +++.+.++++|++|||||+..                                  +.                       
T Consensus        73 ~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~  152 (314)
T TIGR01289        73 QQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLA  152 (314)
T ss_pred             HHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCC
Confidence            999888899999999999732                                  00                       


Q ss_pred             --------------------------------h----------HHHHHHHHHhhcC-CCCeEEEEEeCCcc-cCCcCCCC
Q psy7936         116 --------------------------------N----------NILFYSILFYAIP-GKNVNVYAVHPGIV-KTELGRYM  151 (222)
Q Consensus       116 --------------------------------~----------~~~~~~~la~~~~-~~gI~v~~v~PG~v-~T~~~~~~  151 (222)
                                                      .          ++.+++.|++++. ++||+|++|+||+| +|+|..+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~  232 (314)
T TIGR01289       153 GNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREH  232 (314)
T ss_pred             CcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccc
Confidence                                            0          2444556666664 46899999999999 79998653


Q ss_pred             CCCCCcchhhhHHHHHH---HhcCChHHHHHHHHHHhcCCCcccccccccccccc-----cccCCCcccc
Q psy7936         152 DDTYFPGARTLGRVLMW---WWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKV-----AKSRNFPFEL  213 (222)
Q Consensus       152 ~~~~~~~~~~~~~~~~~---~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~-----~~~~~~~~~~  213 (222)
                      ...  ...  ...++.+   ....+|++.|+.+++++.+... ..+|.|+.+++.     ..+++...+.
T Consensus       233 ~~~--~~~--~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~  297 (314)
T TIGR01289       233 VPL--FRT--LFPPFQKYITKGYVSEEEAGERLAQVVSDPKL-KKSGVYWSWGNRQESFVNQLSEEVSDD  297 (314)
T ss_pred             cHH--HHH--HHHHHHHHHhccccchhhhhhhhHHhhcCccc-CCCceeeecCCcccccccCCChhhcCH
Confidence            211  000  0011111   1147999999999999776543 368999976543     2445554443

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.5e-22  Score=161.99  Aligned_cols=176  Identities=22%  Similarity=0.205  Sum_probs=137.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+.            +.++.++++|+.+.+++.++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~~~   69 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG------------DARFVPVACDLTDAASLAAALA   69 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------------CCceEEEEecCCCHHHHHHHHH
Confidence            5799999999999999999999999999999999988777766552            3467889999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHh----------------hh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCIL----------------SN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------------  116 (222)
                      .+.+.++++|++|||+|....                .|                                         
T Consensus        70 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~y~  149 (257)
T PRK07074         70 NAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALGHPAYS  149 (257)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCCCcccH
Confidence            998888999999999986430                00                                         


Q ss_pred             -----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC--CcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 -----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY--FPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 -----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                           +..++++++.++.++||+|+++.||+++|++........  .........+..+  +.+++|+++.+++|+ ++.
T Consensus       150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~a~~~~~l~-~~~  226 (257)
T PRK07074        150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQD--FATPDDVANAVLFLA-SPA  226 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCC--CCCHHHHHHHHHHHc-Cch
Confidence                 567888999999999999999999999999865422111  0011001112222  689999999999997 445


Q ss_pred             cccccccccc-ccccc
Q psy7936         190 AAKETGLYYS-DYKVA  204 (222)
Q Consensus       190 ~~~~~G~~i~-~~~~~  204 (222)
                      ..+++|+++. +++..
T Consensus       227 ~~~~~g~~~~~~~g~~  242 (257)
T PRK07074        227 ARAITGVCLPVDGGLT  242 (257)
T ss_pred             hcCcCCcEEEeCCCcC
Confidence            6789999984 44433

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.2e-21  Score=159.79  Aligned_cols=163  Identities=18%  Similarity=0.190  Sum_probs=130.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++++||||++|||++++++|+++|++|++++|+.+.++++.+.+...          +.++.+++||+++.+++.++++.
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~~~~~~~~~   70 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA----------GGDGFYQRCDVRDYSQLTALAQA   70 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCceEEEEccCCCHHHHHHHHHH
Confidence            47999999999999999999999999999999999888888877653          55788999999999999999999


Q ss_pred             HHhhccceeEEEechhhHHh----------------hh------------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCIL----------------SN------------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l----------------~~------------------------------------------  116 (222)
                      +.+.++++|++|||||....                +|                                          
T Consensus        71 i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~  150 (270)
T PRK05650         71 CEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYN  150 (270)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHH
Confidence            99888999999999996430                00                                          


Q ss_pred             -----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 -----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 -----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                           +.+++++++.++.+.||++++|+||+++|++............. ...........+|+++|+.++..+..+
T Consensus       151 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        151 VAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKA-QVGKLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHH-HHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence                 67889999999999999999999999999987754322111000 111111112579999999999997654

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=2.6e-22  Score=161.73  Aligned_cols=165  Identities=24%  Similarity=0.212  Sum_probs=124.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+....                   ...++.++.+|+++.     
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-------------------~~~~~~~~~~D~~~~-----   57 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-------------------LSGNFHFLQLDLSDD-----   57 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-------------------cCCcEEEEECChHHH-----
Confidence            46789999999999999999999999999999999975321                   123678899999987     


Q ss_pred             HHHHHHhhccceeEEEechhhHH----h-------------hh-------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----L-------------SN-------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----l-------------~~-------------------------------------  116 (222)
                       ++.+.+.++++|++|||||...    +             +|                                     
T Consensus        58 -~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  136 (235)
T PRK06550         58 -LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG  136 (235)
T ss_pred             -HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC
Confidence             3444455689999999999641    0             00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                +..+++.++.++.++||+||+|+||+++|++....... ..........|+.+  +.+|+|+|+.++|++
T Consensus       137 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~~l~  214 (235)
T PRK06550        137 GAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKR--WAEPEEVAELTLFLA  214 (235)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCC--CCCHHHHHHHHHHHc
Confidence                      67889999999999999999999999999987533221 11111112234444  689999999999996


Q ss_pred             cCCCcccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~~  203 (222)
                       ++...+++|+.+..++.
T Consensus       215 -s~~~~~~~g~~~~~~gg  231 (235)
T PRK06550        215 -SGKADYMQGTIVPIDGG  231 (235)
T ss_pred             -ChhhccCCCcEEEECCc
Confidence             44567999999854443

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.1e-21  Score=158.88  Aligned_cols=175  Identities=23%  Similarity=0.252  Sum_probs=134.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC----ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR----DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+.+++++||||++|||+++++.|+++|++|++++|    +.+..+++.+.+..          .+.++.++.+|+++.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~   72 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA----------AGGKALGLAFDVRDFA   72 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh----------cCCcEEEEEccCCCHH
Confidence            466789999999999999999999999999999765    34445555555443          2457889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH-----------------------------hh------h---------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI-----------------------------LS------N---------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~-----------------------------l~------~---------------  116 (222)
                      ++.++++.+.+.++++|++|||+|...                             +.      .               
T Consensus        73 ~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~  152 (249)
T PRK12827         73 ATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR  152 (249)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC
Confidence            999999999888899999999998643                             00      0               


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                    +..+++.++.++.+.||++++|+||+++|++.......   .......+..+  ..+++++|+.++
T Consensus       153 ~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---~~~~~~~~~~~--~~~~~~va~~~~  227 (249)
T PRK12827        153 GNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---EHLLNPVPVQR--LGEPDEVAALVA  227 (249)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---HHHHhhCCCcC--CcCHHHHHHHHH
Confidence                          56778888888888899999999999999987654321   11101122222  568999999999


Q ss_pred             HHhcCCCcccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~  201 (222)
                      +++ .+...+++|+++..+
T Consensus       228 ~l~-~~~~~~~~g~~~~~~  245 (249)
T PRK12827        228 FLV-SDAASYVTGQVIPVD  245 (249)
T ss_pred             HHc-CcccCCccCcEEEeC
Confidence            996 445678999998544

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.88  E-value=5.3e-22  Score=160.57  Aligned_cols=175  Identities=25%  Similarity=0.222  Sum_probs=133.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh-HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      |+++|||+++|||+++|+.|++.|++|++++|+.. ..++....+..          .+.++.++++|+++.+++.++++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~v~~~~~   72 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF----------TEDQVRLKELDVTDTEECAEALA   72 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc----------cCCeEEEEEcCCCCHHHHHHHHH
Confidence            68999999999999999999999999999999854 22222222211          24578899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHh----------------hh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCIL----------------SN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------------  116 (222)
                      .+.+.++++|++|||+|....                .|                                         
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y  152 (245)
T PRK12824         73 EIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNY  152 (245)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHH
Confidence            999999999999999986420                00                                         


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                            +..+++.++.++.+.||++++|.||+++|++.....+. .........++++  ..+|+|+++.+.+|+ ++..
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~va~~~~~l~-~~~~  228 (245)
T PRK12824        153 SAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPE-VLQSIVNQIPMKR--LGTPEEIAAAVAFLV-SEAA  228 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHH-HHHHHHhcCCCCC--CCCHHHHHHHHHHHc-Cccc
Confidence                  67788999999988999999999999999987654321 1111101122223  579999999999996 4446


Q ss_pred             ccccccccccccc
Q psy7936         191 AKETGLYYSDYKV  203 (222)
Q Consensus       191 ~~~~G~~i~~~~~  203 (222)
                      .+++|+.+..++.
T Consensus       229 ~~~~G~~~~~~~g  241 (245)
T PRK12824        229 GFITGETISINGG  241 (245)
T ss_pred             cCccCcEEEECCC
Confidence            7899999954443

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.88  E-value=1.2e-21  Score=165.31  Aligned_cols=151  Identities=21%  Similarity=0.280  Sum_probs=118.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ..|++++||||++|||+++|++|+++|++|++++|+.+.++++.++++...        ++.++..+.+|+++  ++.+.
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~--------~~~~~~~~~~Dl~~--~~~~~  120 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKY--------SKTQIKTVVVDFSG--DIDEG  120 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHC--------CCcEEEEEEEECCC--CcHHH
Confidence            368999999999999999999999999999999999999999988887642        34578889999985  23333


Q ss_pred             HHHHHhhcc--ceeEEEechhhHHh------------------hh-----------------------------------
Q psy7936          92 AQDINQTEA--NVHILINNAVYCIL------------------SN-----------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~--~id~li~~ag~~~l------------------~~-----------------------------------  116 (222)
                      ++.+.+..+  ++|++|||||+...                  +|                                   
T Consensus       121 ~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~  200 (320)
T PLN02780        121 VKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP  200 (320)
T ss_pred             HHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC
Confidence            333333333  57799999997420                  00                                   


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                    +..|+++|+.|++++||+|++|+||+++|+|...... .+             ...+|+++|+.++
T Consensus       201 ~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~~-~~-------------~~~~p~~~A~~~~  266 (320)
T PLN02780        201 SDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRS-SF-------------LVPSSDGYARAAL  266 (320)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccCC-CC-------------CCCCHHHHHHHHH
Confidence                          7899999999999999999999999999999763211 00             0468999999999


Q ss_pred             HHhc
Q psy7936         183 HCAL  186 (222)
Q Consensus       183 ~l~~  186 (222)
                      ..+.
T Consensus       267 ~~~~  270 (320)
T PLN02780        267 RWVG  270 (320)
T ss_pred             HHhC
Confidence            9863

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.5e-21  Score=158.75  Aligned_cols=158  Identities=26%  Similarity=0.303  Sum_probs=128.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++++++||||++|||.+++++|+++|++|++++|+.+.++++..++ .          .+.++.++.+|+++.+++.+
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~----------~~~~~~~~~~D~~d~~~~~~   70 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P----------YPGRHRWVVADLTSEAGREA   70 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h----------cCCceEEEEccCCCHHHHHH
Confidence            467899999999999999999999999999999999998888777666 2          24578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+ ++++|++|||||....                +|                                      
T Consensus        71 ~~~~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  149 (263)
T PRK09072         71 VLARARE-MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGY  149 (263)
T ss_pred             HHHHHHh-cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCc
Confidence            9998866 7899999999987430                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..++++++.++.++||+|++|+||+++|++....... ...      .+. ..+.+|+++|+.+++++..
T Consensus       150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~-~~~------~~~-~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        150 ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA-LNR------ALG-NAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc-ccc------ccc-CCCCCHHHHHHHHHHHHhC
Confidence                     67888999999999999999999999999986543211 000      000 0157999999999999765


Q ss_pred             C
Q psy7936         188 E  188 (222)
Q Consensus       188 ~  188 (222)
                      .
T Consensus       222 ~  222 (263)
T PRK09072        222 E  222 (263)
T ss_pred             C
Confidence            4

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.1e-21  Score=158.77  Aligned_cols=173  Identities=21%  Similarity=0.183  Sum_probs=130.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ..+|+++||||++|||+++++.|++.|++|+++++ +.+.++++.+.+...          +.++.++.+|+++.+++.+
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~d~~~~~~   76 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL----------GRRAVALQADLADEAEVRA   76 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc----------CCeEEEEEcCCCCHHHHHH
Confidence            46889999999999999999999999999988776 456666666666542          4578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||....                +|                                      
T Consensus        77 ~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~  156 (258)
T PRK09134         77 LVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDF  156 (258)
T ss_pred             HHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCc
Confidence            999998888999999999986430                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..+++.++.++.+. |+|++|+||++.|.......  .+ .......+.++  ..+|+|+|+.+++++..
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~~~--~~-~~~~~~~~~~~--~~~~~d~a~~~~~~~~~  230 (258)
T PRK09134        157 LSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQSPE--DF-ARQHAATPLGR--GSTPEEIAAAVRYLLDA  230 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccChH--HH-HHHHhcCCCCC--CcCHHHHHHHHHHHhcC
Confidence                     678888888888765 99999999999886422110  01 01001112222  57899999999999753


Q ss_pred             CCcccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYKV  203 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~~  203 (222)
                         .+++|+++..++.
T Consensus       231 ---~~~~g~~~~i~gg  243 (258)
T PRK09134        231 ---PSVTGQMIAVDGG  243 (258)
T ss_pred             ---CCcCCCEEEECCC
Confidence               4689998854443

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.88  E-value=8.8e-22  Score=159.46  Aligned_cols=175  Identities=21%  Similarity=0.212  Sum_probs=135.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEE-EeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIM-ACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      |+++||||+++||.+++++|+++|++|++ ..|+.+..++....+...          +.++.++++|+++.+++.++++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~d~~~i~~~~~   71 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA----------GGKAFVLQADISDENQVVAMFT   71 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC----------CCeEEEEEccCCCHHHHHHHHH
Confidence            58999999999999999999999999876 467877777777666542          4578889999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHh---------------------------------------------hh------------
Q psy7936          94 DINQTEANVHILINNAVYCIL---------------------------------------------SN------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l---------------------------------------------~~------------  116 (222)
                      .+.+.++++|++|||+|....                                             ++            
T Consensus        72 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~  151 (247)
T PRK09730         72 AIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG  151 (247)
T ss_pred             HHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC
Confidence            998889999999999996420                                             00            


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                 +..+++.++.++.++||++++|.||++.|++.................|+.+  ..+|+|+|+.+.+++
T Consensus       152 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~~~  229 (247)
T PRK09730        152 EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQR--GGQPEEVAQAIVWLL  229 (247)
T ss_pred             cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHhhc
Confidence                       5678888888888889999999999999998654321111111101122222  468999999999997


Q ss_pred             cCCCccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYK  202 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~  202 (222)
                      .+ ...+++|+++..++
T Consensus       230 ~~-~~~~~~g~~~~~~g  245 (247)
T PRK09730        230 SD-KASYVTGSFIDLAG  245 (247)
T ss_pred             Ch-hhcCccCcEEecCC
Confidence            54 45689999885544

>KOG1199|consensus

Probab=99.88  E-value=1.4e-22  Score=151.69  Aligned_cols=171  Identities=19%  Similarity=0.189  Sum_probs=141.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+|.+++|||+.+|+|++.|..|+++|+.|++.+--.....+..+++             +++++|...|++++++++..
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-------------g~~~vf~padvtsekdv~aa   73 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-------------GGKVVFTPADVTSEKDVRAA   73 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-------------CCceEEeccccCcHHHHHHH
Confidence            46789999999999999999999999999999998777777777665             77999999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHhhh-------------------------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCILSN-------------------------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~-------------------------------------------------------  116 (222)
                      +.....+++++|.++||||+..-..                                                       
T Consensus        74 la~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviinta  153 (260)
T KOG1199|consen   74 LAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTA  153 (260)
T ss_pred             HHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeec
Confidence            9999999999999999999887000                                                       


Q ss_pred             --------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC--CCcchhhhHHHHHHHhcCCh
Q psy7936         117 --------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT--YFPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 --------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p  174 (222)
                                          +.+++--+++.++..|||+++|.||.++|+|....++.  .+..   ...|+.. +..+|
T Consensus       154 svaafdgq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla---~~ipfps-rlg~p  229 (260)
T KOG1199|consen  154 SVAAFDGQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLA---QLIPFPS-RLGHP  229 (260)
T ss_pred             eeeeecCccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHH---HhCCCch-hcCCh
Confidence                                56777789999999999999999999999999988743  1111   1122211 26899


Q ss_pred             HHHHHHHHHHhcCCCccccccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .|-+..+-.+..   ..++||..|.-++
T Consensus       230 ~eyahlvqaiie---np~lngevir~dg  254 (260)
T KOG1199|consen  230 HEYAHLVQAIIE---NPYLNGEVIRFDG  254 (260)
T ss_pred             HHHHHHHHHHHh---CcccCCeEEEecc
Confidence            999988888874   4599999995444

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.3e-21  Score=155.79  Aligned_cols=152  Identities=17%  Similarity=0.281  Sum_probs=128.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|+++||||++|||++++++|+++|++|++++|+.+..+++.+.+....        ++.++.++++|+++.+++.++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~   73 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARY--------PGIKVAVAALDVNDHDQVFEVFA   73 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC--------CCceEEEEEcCCCCHHHHHHHHH
Confidence            6799999999999999999999999999999999998888877776532        35689999999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHh----------------hh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCIL----------------SN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------------  116 (222)
                      .+.+.++++|++|||||+...                +|                                         
T Consensus        74 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~  153 (248)
T PRK08251         74 EFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAA  153 (248)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCccc
Confidence            999999999999999985320                00                                         


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                             +..+++.++.++...||+|++|+||+++|+|.......    .          ...+|+++|+.++..+..
T Consensus       154 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~----~----------~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        154 YAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKST----P----------FMVDTETGVKALVKAIEK  217 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccccC----C----------ccCCHHHHHHHHHHHHhc
Confidence                   56778888888888899999999999999998765321    0          157899999999988644

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.8e-21  Score=158.02  Aligned_cols=151  Identities=19%  Similarity=0.245  Sum_probs=125.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|+++||||++|||.++++.|+++|++|++++|+.+.++++.+.+..          .+ ++.++++|+++.+++.++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----------~~-~~~~~~~Dl~~~~~i~~~~~   70 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK----------AA-RVSVYAADVRDADALAAAAA   70 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc----------CC-eeEEEEcCCCCHHHHHHHHH
Confidence            46899999999999999999999999999999999887776655532          12 78899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHh-----------------hh----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCIL-----------------SN----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l-----------------~~----------------------------------------  116 (222)
                      .+.+.++++|++|||||....                 +|                                        
T Consensus        71 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~  150 (257)
T PRK07024         71 DFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGA  150 (257)
T ss_pred             HHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcc
Confidence            999999999999999986420                 00                                        


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                             +..++++++.++.++||+|++|+||+++|++.......   .      +    ...+|+++|+.++..+..+
T Consensus       151 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~------~----~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        151 YSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYP---M------P----FLMDADRFAARAARAIARG  216 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCC---C------C----CccCHHHHHHHHHHHHhCC
Confidence                   67888999999999999999999999999986543210   0      0    0468999999999997554

>KOG1611|consensus

Probab=99.88  E-value=2.6e-21  Score=150.72  Aligned_cols=161  Identities=29%  Similarity=0.383  Sum_probs=126.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEE-EEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKV-IMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v-~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +.|.++||||++|||+.++++|.+. |..+ +.+.|+.+...+..+....          ...+++.+++|+++.+++.+
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~----------~d~rvHii~Ldvt~deS~~~   71 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSK----------SDSRVHIIQLDVTCDESIDN   71 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhc----------cCCceEEEEEecccHHHHHH
Confidence            4567999999999999999999976 4544 4456778875222222211          25699999999999999999


Q ss_pred             HHHHHHhh--ccceeEEEechhhHHh-----------------hh-----------------------------------
Q psy7936          91 CAQDINQT--EANVHILINNAVYCIL-----------------SN-----------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~--~~~id~li~~ag~~~l-----------------~~-----------------------------------  116 (222)
                      +++++.+.  ...+|+||||||+...                 +|                                   
T Consensus        72 ~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIi  151 (249)
T KOG1611|consen   72 FVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAII  151 (249)
T ss_pred             HHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEE
Confidence            99999887  5689999999998870                 00                                   


Q ss_pred             --------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHh
Q psy7936         117 --------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWW  170 (222)
Q Consensus       117 --------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  170 (222)
                                                ++.|+|+++.++++.+|.|..+|||||+|+|.....                  
T Consensus       152 nisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a------------------  213 (249)
T KOG1611|consen  152 NISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKA------------------  213 (249)
T ss_pred             EeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCc------------------
Confidence                                      899999999999999999999999999999998554                  


Q ss_pred             cCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         171 MKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       171 ~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ..+|||.+..++... +.-...-||.|+..++
T Consensus       214 ~ltveeSts~l~~~i-~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  214 ALTVEESTSKLLASI-NKLKNEHNGGFFNRDG  244 (249)
T ss_pred             ccchhhhHHHHHHHH-HhcCcccCcceEccCC
Confidence            568888888777764 3334566898886544

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.4e-21  Score=158.23  Aligned_cols=172  Identities=22%  Similarity=0.223  Sum_probs=130.0

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ++++++++++|||+++|||..+++.|+++|++|++++|+.+.++++.+..               .+.++.+|+++..++
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---------------~~~~~~~D~~~~~~v   68 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET---------------GCEPLRLDVGDDAAI   68 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------------CCeEEEecCCCHHHH
Confidence            35688999999999999999999999999999999999987766544322               234678999999988


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      .++++.    .+++|++|||+|....                .|                                    
T Consensus        69 ~~~~~~----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  144 (245)
T PRK07060         69 RAALAA----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL  144 (245)
T ss_pred             HHHHHH----hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC
Confidence            887665    4689999999986430                00                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-CcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..+++.++.++.+.||+++++.||++.|++........ .........+..+  +.+|+|+|+.+.+
T Consensus       145 ~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~a~~~~~  222 (245)
T PRK07060        145 PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGR--FAEVDDVAAPILF  222 (245)
T ss_pred             CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCC--CCCHHHHHHHHHH
Confidence                        577888899898888999999999999999865332211 0011101122233  6899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      ++. +...+++|+.+..++
T Consensus       223 l~~-~~~~~~~G~~~~~~~  240 (245)
T PRK07060        223 LLS-DAASMVSGVSLPVDG  240 (245)
T ss_pred             HcC-cccCCccCcEEeECC
Confidence            964 456789999995444

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.87  E-value=1.2e-21  Score=150.37  Aligned_cols=122  Identities=26%  Similarity=0.346  Sum_probs=111.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .++|.++|||||++|||+++|++|.+.|-+|++++|+++.+++..+..              ..++...||+.|.+++++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~--------------p~~~t~v~Dv~d~~~~~~   67 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN--------------PEIHTEVCDVADRDSRRE   67 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC--------------cchheeeecccchhhHHH
Confidence            468999999999999999999999999999999999999998887653              466789999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhh------------------------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSN------------------------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~------------------------------------------------------  116 (222)
                      +++++.+.|+.+|++|||||++.-.+                                                      
T Consensus        68 lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~  147 (245)
T COG3967          68 LVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMA  147 (245)
T ss_pred             HHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccc
Confidence            99999999999999999999998110                                                      


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCC
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTE  146 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~  146 (222)
                                 ++.|+.+|.+.++..+|+|.-+.|..|+|.
T Consensus       148 ~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         148 STPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                       899999999999998999999999999997

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.8e-21  Score=158.17  Aligned_cols=168  Identities=18%  Similarity=0.189  Sum_probs=128.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+             +.++.++++|+++.+++.+++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~~~   68 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-------------GDRLLPLALDVTDRAAVFAAV   68 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-------------cCCeeEEEccCCCHHHHHHHH
Confidence            5789999999999999999999999999999999988776554332             336788899999999999999


Q ss_pred             HHHHhhccceeEEEechhhHHh----------------hh----------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCIL----------------SN----------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------------  116 (222)
                      +.+.+.++++|++|||||....                .|                                        
T Consensus        69 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~  148 (275)
T PRK08263         69 ETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGI  148 (275)
T ss_pred             HHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccH
Confidence            9998888999999999997530                00                                        


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC-C-CC--cchh----hhHHHHHHHhc-CChHHHHHH
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD-T-YF--PGAR----TLGRVLMWWWM-KTPEQGAQT  180 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~-~-~~--~~~~----~~~~~~~~~~~-~~p~e~a~~  180 (222)
                             +..+++.++.++++.||+|++|.||+++|++...... . ..  ....    ....+...  . .+|+++|+.
T Consensus       149 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~dva~~  226 (275)
T PRK08263        149 YHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERS--VDGDPEAAAEA  226 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhcc--CCCCHHHHHHH
Confidence                   6778899999999999999999999999998852211 1 00  0111    01112222  4 799999999


Q ss_pred             HHHHhcCCCccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYY  198 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i  198 (222)
                      +++++..+   ..+++++
T Consensus       227 ~~~l~~~~---~~~~~~~  241 (275)
T PRK08263        227 LLKLVDAE---NPPLRLF  241 (275)
T ss_pred             HHHHHcCC---CCCeEEE
Confidence            99997554   2244454

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=3.6e-21  Score=155.65  Aligned_cols=178  Identities=28%  Similarity=0.329  Sum_probs=135.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh-HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+++|+++|||++++||.++++.|++.|++|+++.|+.+ ..+...+.++.          .+.++.++.+|+++.+++.
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~~~~   71 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGA----------LGGKALAVQGDVSDAESVE   71 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh----------cCCceEEEEcCCCCHHHHH
Confidence            357899999999999999999999999999988888764 45555555543          2557889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||+|....                .|                                     
T Consensus        72 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~  151 (248)
T PRK05557         72 RAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG  151 (248)
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC
Confidence            9999998888999999999986320                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..+++.++.++.+.||++++++||+++|++....... .........+..+  ..+|+++++.+.+++.
T Consensus       152 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~va~~~~~l~~  228 (248)
T PRK05557        152 QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPED-VKEAILAQIPLGR--LGQPEEIASAVAFLAS  228 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChH-HHHHHHhcCCCCC--CcCHHHHHHHHHHHcC
Confidence                      45677888888888899999999999999887654321 1111101112222  5789999999999864


Q ss_pred             CCCccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYK  202 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~  202 (222)
                      . ...+++|+.+..++
T Consensus       229 ~-~~~~~~g~~~~i~~  243 (248)
T PRK05557        229 D-EAAYITGQTLHVNG  243 (248)
T ss_pred             c-ccCCccccEEEecC
Confidence            4 56788999885443

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.87  E-value=8.6e-21  Score=152.71  Aligned_cols=169  Identities=25%  Similarity=0.240  Sum_probs=132.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|+++||||+++||+.+++.|+++|++|++++|+.+...+..+.+..            ..+.++.+|+.+.+++.
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~------------~~~~~~~~D~~~~~~~~   70 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA------------DALRIGGIDLVDPQAAR   70 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh------------cCceEEEeecCCHHHHH
Confidence            346789999999999999999999999999999999998777666555533            13456789999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++||++|....                .|                                     
T Consensus        71 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  150 (239)
T PRK12828         71 RAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG  150 (239)
T ss_pred             HHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC
Confidence            9999999999999999999985320                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..+++.++.++.+.||+++++.||++.|++.......         .++..  +.+++|+|+.+.+++.
T Consensus       151 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~---------~~~~~--~~~~~dva~~~~~~l~  219 (239)
T PRK12828        151 MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD---------ADFSR--WVTPEQIAAVIAFLLS  219 (239)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc---------hhhhc--CCCHHHHHHHHHHHhC
Confidence                      34567778888878899999999999999865432211         11222  5789999999999975


Q ss_pred             CCCccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYK  202 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~  202 (222)
                      + ...+++|+.+..++
T Consensus       220 ~-~~~~~~g~~~~~~g  234 (239)
T PRK12828        220 D-EAQAITGASIPVDG  234 (239)
T ss_pred             c-ccccccceEEEecC
Confidence            4 45578999985443

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-20  Score=155.73  Aligned_cols=168  Identities=21%  Similarity=0.244  Sum_probs=129.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+...          +.++.++++|+++.+++.+
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~   76 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD----------GGEAVAFPLDVTDPDSVKS   76 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEECCCCCHHHHHH
Confidence            467789999999999999999999999999999999988777776665542          4578889999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||....                +|                                      
T Consensus        77 ~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~  156 (274)
T PRK07775         77 FVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHM  156 (274)
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCc
Confidence            999998888999999999987530                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHH--HH-HHHhcCChHHHHHHHHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGR--VL-MWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~p~e~a~~i~~l  184 (222)
                               +..+++.++.++.+.||++++|+||+++|++.................  .. ......+++|+|+.++++
T Consensus       157 ~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~  236 (274)
T PRK07775        157 GAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFV  236 (274)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHH
Confidence                     677888888888888999999999999999765432211100000000  00 011267999999999999


Q ss_pred             hcCC
Q psy7936         185 ALDE  188 (222)
Q Consensus       185 ~~~~  188 (222)
                      +..+
T Consensus       237 ~~~~  240 (274)
T PRK07775        237 AETP  240 (274)
T ss_pred             hcCC
Confidence            7654

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.4e-21  Score=156.62  Aligned_cols=169  Identities=22%  Similarity=0.203  Sum_probs=129.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |.+|+++||||++|||.++++.|+++|++|++++|+.+..+++.+.+....        .+.++.++.+|+++.+++.. 
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~d~~~~~~-   71 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLN--------LQQNIKVQQLDVTDQNSIHN-   71 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC--------CCCceeEEecCCCCHHHHHH-
Confidence            357899999999999999999999999999999999988877766665431        23578899999999999999 


Q ss_pred             HHHHHhhccceeEEEechhhHHh----------------hh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL----------------SN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------------  116 (222)
                      ++++.+.++++|++|||||....                +|                                       
T Consensus        72 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  151 (280)
T PRK06914         72 FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLS  151 (280)
T ss_pred             HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCc
Confidence            88888888999999999986430                00                                       


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC----C---Cc--chhh-hH--HHHHHHhcCChHH
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT----Y---FP--GART-LG--RVLMWWWMKTPEQ  176 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~----~---~~--~~~~-~~--~~~~~~~~~~p~e  176 (222)
                              +..++++++.++.++||+++++.||+++|++.......    .   ..  .... ..  .+.....+.+|+|
T Consensus       152 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  231 (280)
T PRK06914        152 PYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPID  231 (280)
T ss_pred             hhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHH
Confidence                    67788899999889999999999999999986532110    0   00  0000 00  0001122679999


Q ss_pred             HHHHHHHHhcCCC
Q psy7936         177 GAQTTLHCALDEG  189 (222)
Q Consensus       177 ~a~~i~~l~~~~~  189 (222)
                      +|+.+++++.++.
T Consensus       232 va~~~~~~~~~~~  244 (280)
T PRK06914        232 VANLIVEIAESKR  244 (280)
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999986653

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.1e-20  Score=154.57  Aligned_cols=156  Identities=21%  Similarity=0.159  Sum_probs=124.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+.            +.++.++++|+++.+++.++++.
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~v~~~~~~   69 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG------------AGNAWTGALDVTDRAAWDAALAD   69 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc------------CCceEEEEecCCCHHHHHHHHHH
Confidence            689999999999999999999999999999999988777765542            34788999999999999999998


Q ss_pred             HHhh-ccceeEEEechhhHHh----------------hh-----------------------------------------
Q psy7936          95 INQT-EANVHILINNAVYCIL----------------SN-----------------------------------------  116 (222)
Q Consensus        95 i~~~-~~~id~li~~ag~~~l----------------~~-----------------------------------------  116 (222)
                      +.+. ++++|++|||||....                +|                                         
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  149 (260)
T PRK08267         70 FAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVY  149 (260)
T ss_pred             HHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhh
Confidence            8776 7899999999997530                00                                         


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                            +..++++++.++.++||++++|.||+++|+|.......... .  ......  ...+|+++|+.+++++..
T Consensus       150 ~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~-~--~~~~~~--~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        150 SATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDA-G--STKRLG--VRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhh-h--hHhhcc--CCCCHHHHHHHHHHHHhC
Confidence                  67888999999999999999999999999987752211110 0  111111  147899999999999744

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.86  E-value=4.5e-21  Score=154.86  Aligned_cols=178  Identities=26%  Similarity=0.319  Sum_probs=138.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|.+|+++||||+++||..+++.|+++|++|++++|+.+..+.+.+.++..          +.++.++.+|+++.+++..
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~   71 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA----------GGEARVLVFDVSDEAAVRA   71 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc----------CCceEEEEccCCCHHHHHH
Confidence            456789999999999999999999999999999999998887777666542          5678899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh-------------------------hh-----------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL-------------------------SN-----------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l-------------------------~~-----------------------------  116 (222)
                      +++.+.+.++++|++||++|....                         .+                             
T Consensus        72 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~  151 (246)
T PRK05653         72 LIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQ  151 (246)
T ss_pred             HHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCC
Confidence            999988888999999999977420                         00                             


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..+++.++.++.+.|+++++|.||.+.+++....... .........+...  ..+++++++.+.+++ .
T Consensus       152 ~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~dva~~~~~~~-~  227 (246)
T PRK05653        152 TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEE-VKAEILKEIPLGR--LGQPEEVANAVAFLA-S  227 (246)
T ss_pred             cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHH-HHHHHHhcCCCCC--CcCHHHHHHHHHHHc-C
Confidence                     46778888888888899999999999999887542211 0000001111122  578899999999996 5


Q ss_pred             CCccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYK  202 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~  202 (222)
                      +....++|+++..++
T Consensus       228 ~~~~~~~g~~~~~~g  242 (246)
T PRK05653        228 DAASYITGQVIPVNG  242 (246)
T ss_pred             chhcCccCCEEEeCC
Confidence            556688999985444

>PRK09135 pteridine reductase; Provisional

Probab=99.86  E-value=8.7e-21  Score=153.69  Aligned_cols=176  Identities=24%  Similarity=0.202  Sum_probs=130.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC-hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +.+++++||||+++||+.++++|+++|++|++++|+ .+..+++.+.+...         ....+.++++|+++.+++..
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~~~~~~~~   74 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL---------RPGSAAALQADLLDPDALPE   74 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh---------cCCceEEEEcCCCCHHHHHH
Confidence            467899999999999999999999999999999986 45556655555443         23468899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||....                +|                                      
T Consensus        75 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (249)
T PRK09135         75 LVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYP  154 (249)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCch
Confidence            999998889999999999995320                00                                      


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                              +..+++.++.++.+ +|++++|.||++.|++.................++.+  ..+++|+++.+.+++.. 
T Consensus       155 ~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~a~~~~~~~~~-  230 (249)
T PRK09135        155 VYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKR--IGTPEDIAEAVRFLLAD-  230 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCC--CcCHHHHHHHHHHHcCc-
Confidence                    67777788888755 6999999999999998643221111111101112222  46899999999888653 


Q ss_pred             Ccccccccccccc
Q psy7936         189 GAAKETGLYYSDY  201 (222)
Q Consensus       189 ~~~~~~G~~i~~~  201 (222)
                       ...++|+.+.-+
T Consensus       231 -~~~~~g~~~~i~  242 (249)
T PRK09135        231 -ASFITGQILAVD  242 (249)
T ss_pred             -cccccCcEEEEC
Confidence             346789887433

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.86  E-value=1.8e-20  Score=152.46  Aligned_cols=166  Identities=20%  Similarity=0.239  Sum_probs=125.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++++||||++|||.++++.|+++|++|++++|+.+.++++.+.+             +.++.++.+|+++.+++..+++.
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~i~~~~~~   67 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-------------GDNLYIAQLDVRNRAAIEEMLAS   67 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------------ccceEEEEecCCCHHHHHHHHHH
Confidence            36899999999999999999999999999999988776655443             33678899999999999999999


Q ss_pred             HHhhccceeEEEechhhHH--------------------------hhh--------------------------------
Q psy7936          95 INQTEANVHILINNAVYCI--------------------------LSN--------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~--------------------------l~~--------------------------------  116 (222)
                      +.+.++++|++|||||...                          ++.                                
T Consensus        68 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  147 (248)
T PRK10538         68 LPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVY  147 (248)
T ss_pred             HHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchh
Confidence            9888899999999998631                          000                                


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCC-CCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYM-DDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                            +..+++.++.++.++||+|++|.||++.|.+.... ..... ..  .........+.+|+|+|+.+++++..+.
T Consensus       148 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        148 GATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD-GK--AEKTYQNTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcH-HH--HHhhccccCCCCHHHHHHHHHHHhcCCC
Confidence                  68888999999999999999999999985544321 11100 00  0000001125799999999999976553


Q ss_pred             cccccccc
Q psy7936         190 AAKETGLY  197 (222)
Q Consensus       190 ~~~~~G~~  197 (222)
                       .+.+++.
T Consensus       225 -~~~~~~~  231 (248)
T PRK10538        225 -HVNINTL  231 (248)
T ss_pred             -cccchhh
Confidence             3444444

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.3e-20  Score=152.93  Aligned_cols=163  Identities=26%  Similarity=0.320  Sum_probs=128.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +++++||||++|||.++++.|++.|++|++++|+.+..+++.+.+...          +.++.++.+|+++.+++.++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~~~~~~~~~~~   70 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH----------GGEALVVPTDVSDAEACERLIE   70 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHHHHHHH
Confidence            468999999999999999999999999999999998888777776553          4578899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHH------h-----------hh----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCI------L-----------SN----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~------l-----------~~----------------------------------------  116 (222)
                      .+.+.++++|++|||+|...      .           +|                                        
T Consensus        71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  150 (263)
T PRK06181         71 AAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGY  150 (263)
T ss_pred             HHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHH
Confidence            99888899999999998633      0           00                                        


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                            +..+++.++.++.++||++++|.||++.|++............  ...+.....+.+|+|+|+.+++++...
T Consensus       151 ~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        151 AASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPL--GKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccccc--ccccccccCCCCHHHHHHHHHHHhhCC
Confidence                  5778888899999999999999999999998764321100000  001111112689999999999997554

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.7e-20  Score=152.45  Aligned_cols=163  Identities=23%  Similarity=0.238  Sum_probs=124.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.++++.+.             .+.++.++.+|+++.+++.+++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~-------------~~~~~~~~~~D~~d~~~~~~~~   69 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL-------------HPDRALARLLDVTDFDAIDAVV   69 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh-------------cCCCeeEEEccCCCHHHHHHHH
Confidence            468999999999999999999999999999999998876554332             2346788999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHHh----------------hh----------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCIL----------------SN----------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------------  116 (222)
                      +.+.+.++++|++|||||....                +|                                        
T Consensus        70 ~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~  149 (277)
T PRK06180         70 ADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGY  149 (277)
T ss_pred             HHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcch
Confidence            9998888999999999997430                00                                        


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC--CCcch-hhhHHHH-------HHHhcCChHHHHH
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT--YFPGA-RTLGRVL-------MWWWMKTPEQGAQ  179 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~-~~~~~~~-------~~~~~~~p~e~a~  179 (222)
                             +..++++++.++.+.||+|++|.||+++|++.......  ..... .....+.       ....+.+|+++|+
T Consensus       150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  229 (277)
T PRK06180        150 YCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQ  229 (277)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHH
Confidence                   56788899999988999999999999999875432211  00000 0000010       0112569999999


Q ss_pred             HHHHHhcCC
Q psy7936         180 TTLHCALDE  188 (222)
Q Consensus       180 ~i~~l~~~~  188 (222)
                      .+++++..+
T Consensus       230 ~~~~~l~~~  238 (277)
T PRK06180        230 AILAAVESD  238 (277)
T ss_pred             HHHHHHcCC
Confidence            999997654

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1e-20  Score=152.20  Aligned_cols=166  Identities=23%  Similarity=0.228  Sum_probs=126.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |.+|+++||||++|||+++++.|+++|++|++++|+.+.         ..          .  ..++++|+++.++++++
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~---------~~----------~--~~~~~~D~~~~~~~~~~   59 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID---------DF----------P--GELFACDLADIEQTAAT   59 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc---------cc----------C--ceEEEeeCCCHHHHHHH
Confidence            357899999999999999999999999999999998753         00          1  13678999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh----------------hh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL----------------SN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------------  116 (222)
                      ++.+.+.+ ++|++|||+|....                .|                                       
T Consensus        60 ~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  138 (234)
T PRK07577         60 LAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALDRTS  138 (234)
T ss_pred             HHHHHHhC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCCchH
Confidence            99987776 68999999987420                00                                       


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCc-chhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFP-GARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                             +..+++.++.++.++||+|++|+||+++|++.....+. ... .......++.+  ..+|+|+|..+++++..
T Consensus       139 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~~l~~~  216 (234)
T PRK07577        139 YSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRR--LGTPEEVAAAIAFLLSD  216 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCC--CcCHHHHHHHHHHHhCc
Confidence                   67888999999999999999999999999987654321 110 01101122222  46899999999999644


Q ss_pred             CCccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYK  202 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~  202 (222)
                       ...+++|+.+..++
T Consensus       217 -~~~~~~g~~~~~~g  230 (234)
T PRK07577        217 -DAGFITGQVLGVDG  230 (234)
T ss_pred             -ccCCccceEEEecC
Confidence             45689999985443

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=2.3e-20  Score=151.71  Aligned_cols=173  Identities=23%  Similarity=0.259  Sum_probs=129.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ++++++++|||||+++||++++++|+++|++|++..| +.+...+....++..          +.++.++.+|+++.+++
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~   71 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN----------GGEGIGVLADVSTREGC   71 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc----------CCeeEEEEeccCCHHHH
Confidence            4567899999999999999999999999999888775 445555555554432          44678899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      .++++.+.+.++++|++|||||...                .+|                                    
T Consensus        72 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  151 (252)
T PRK06077         72 ETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGL  151 (252)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCc
Confidence            9999999998899999999999622                000                                    


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC--cchhh-hHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF--PGART-LGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                               +..+++.++.++++ +|+++.|.||+++|++.........  ..... ...+.++  ..+|+|+|+.++++
T Consensus       152 ~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~~  228 (252)
T PRK06077        152 SIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGK--ILDPEEVAEFVAAI  228 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCC--CCCHHHHHHHHHHH
Confidence                     67888899999887 8999999999999998654322100  00000 0011112  58999999999999


Q ss_pred             hcCCCccccccccc
Q psy7936         185 ALDEGAAKETGLYY  198 (222)
Q Consensus       185 ~~~~~~~~~~G~~i  198 (222)
                      +..+   ..+|+.+
T Consensus       229 ~~~~---~~~g~~~  239 (252)
T PRK06077        229 LKIE---SITGQVF  239 (252)
T ss_pred             hCcc---ccCCCeE
Confidence            7432   5577766

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.3e-20  Score=155.94  Aligned_cols=160  Identities=21%  Similarity=0.254  Sum_probs=121.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|+++||||++|||+++++.|+++|++|++++|+.+.++++.+                ..+.++.+|+++.+++..+++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----------------~~~~~~~~Dl~d~~~~~~~~~   67 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----------------EGLEAFQLDYAEPESIAALVA   67 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----------------CCceEEEccCCCHHHHHHHHH
Confidence            5799999999999999999999999999999999887654431                135678999999999999999


Q ss_pred             HHHhhc-cceeEEEechhhHHh----------------hh----------------------------------------
Q psy7936          94 DINQTE-ANVHILINNAVYCIL----------------SN----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~-~~id~li~~ag~~~l----------------~~----------------------------------------  116 (222)
                      .+.+.+ +++|++|||||....                +|                                        
T Consensus        68 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~  147 (277)
T PRK05993         68 QVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGA  147 (277)
T ss_pred             HHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccch
Confidence            987665 689999999986430                00                                        


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC--C------CcchhhhH-------H-HHHHHhcCC
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT--Y------FPGARTLG-------R-VLMWWWMKT  173 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~--~------~~~~~~~~-------~-~~~~~~~~~  173 (222)
                             +..++++|+.|+.++||+|++|+||+++|+|.......  .      ........       . ........+
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLG  227 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCC
Confidence                   78899999999999999999999999999987643211  0      00000000       0 000111468


Q ss_pred             hHHHHHHHHHHhcCCC
Q psy7936         174 PEQGAQTTLHCALDEG  189 (222)
Q Consensus       174 p~e~a~~i~~l~~~~~  189 (222)
                      |+++|+.++..+.++.
T Consensus       228 ~~~va~~i~~a~~~~~  243 (277)
T PRK05993        228 PEAVYAVLLHALTAPR  243 (277)
T ss_pred             HHHHHHHHHHHHcCCC
Confidence            9999999999976653

>PRK06194 hypothetical protein; Provisional

Probab=99.85  E-value=5.5e-20  Score=152.53  Aligned_cols=169  Identities=20%  Similarity=0.202  Sum_probs=129.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+.+|++|||||++|||+++++.|+++|++|++++|+.+.+++..+.+...          +.++.++++|+++.+++.
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~d~~~~~   71 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ----------GAEVLGVRTDVSDAAQVE   71 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc----------CCeEEEEECCCCCHHHHH
Confidence            3567899999999999999999999999999999999988888877776542          457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------h---------------------------h----------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------S---------------------------N----------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~---------------------------~----------  116 (222)
                      ++++.+.+.++++|++|||||....                +                           .          
T Consensus        72 ~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  151 (287)
T PRK06194         72 ALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAG  151 (287)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhh
Confidence            9999999999999999999987430                0                           0          


Q ss_pred             ----------------HHHHHHHHHhhcC--CCCeEEEEEeCCcccCCcCCCCCCC--CCcch---------hhhH-HHH
Q psy7936         117 ----------------NILFYSILFYAIP--GKNVNVYAVHPGIVKTELGRYMDDT--YFPGA---------RTLG-RVL  166 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~--~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~---------~~~~-~~~  166 (222)
                                      +..++++++.++.  ..+|++++|+||+++|.+.......  .....         .... ...
T Consensus       152 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (287)
T PRK06194        152 LLAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKA  231 (287)
T ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhh
Confidence                            6778888888876  3579999999999999987654211  11000         0000 000


Q ss_pred             HHHhcCChHHHHHHHHHHhcCC
Q psy7936         167 MWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       167 ~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                      ......+++|+|+.++.++...
T Consensus       232 ~~~~~~s~~dva~~i~~~~~~~  253 (287)
T PRK06194        232 VGSGKVTAEEVAQLVFDAIRAG  253 (287)
T ss_pred             hhccCCCHHHHHHHHHHHHHcC
Confidence            0001369999999999986443

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2e-20  Score=153.91  Aligned_cols=156  Identities=22%  Similarity=0.277  Sum_probs=122.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++++++||||++|||++++++|+++|++|++++|+.+..+.                  ..++.++++|++|.+++++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~------------------~~~~~~~~~D~~d~~~~~~~~   64 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP------------------IPGVELLELDVTDDASVQAAV   64 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------------------cCCCeeEEeecCCHHHHHHHH
Confidence            46799999999999999999999999999999998764321                  235678999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHHh----------------hh----------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCIL----------------SN----------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------------  116 (222)
                      +.+.+.++++|++|||||....                +|                                        
T Consensus        65 ~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  144 (270)
T PRK06179         65 DEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMAL  144 (270)
T ss_pred             HHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccH
Confidence            9999999999999999997430                00                                        


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-Ccch-hhhH--------HHHHHHhcCChHHHHH
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FPGA-RTLG--------RVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~-~~~~--------~~~~~~~~~~p~e~a~  179 (222)
                             +..+++.++.+++++||++++|.||+++|++........ .... ....        .+..+  ..+|+++|+
T Consensus       145 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~  222 (270)
T PRK06179        145 YAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKK--ADAPEVVAD  222 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhcccc--CCCHHHHHH
Confidence                   678889999999999999999999999999877543221 1100 0000        11112  568999999


Q ss_pred             HHHHHhcCC
Q psy7936         180 TTLHCALDE  188 (222)
Q Consensus       180 ~i~~l~~~~  188 (222)
                      .+++++..+
T Consensus       223 ~~~~~~~~~  231 (270)
T PRK06179        223 TVVKAALGP  231 (270)
T ss_pred             HHHHHHcCC
Confidence            999997654

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.4e-20  Score=149.05  Aligned_cols=150  Identities=23%  Similarity=0.274  Sum_probs=123.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |+++||||++|||+++++.|+++|++|++++|+.+..++..+.+...         ++.++.++++|+++.++++++++.
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~~~~~~~~~~~~   72 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR---------GAVAVSTHELDILDTASHAAFLDS   72 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh---------cCCeEEEEecCCCChHHHHHHHHH
Confidence            68999999999999999999999999999999998888777776543         356899999999999999999888


Q ss_pred             HHhhccceeEEEechhhHHh----------------hh------------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCIL----------------SN------------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l----------------~~------------------------------------------  116 (222)
                      +.+   ++|++|||+|....                +|                                          
T Consensus        73 ~~~---~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  149 (243)
T PRK07102         73 LPA---LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYG  149 (243)
T ss_pred             Hhh---cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccH
Confidence            754   46999999986430                00                                          


Q ss_pred             -----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 -----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 -----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                           +.+++++++.++.+.||+|++|+||+++|++.......   .        .  ...+|+++|+.++.++..+.
T Consensus       150 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~~~---~--------~--~~~~~~~~a~~i~~~~~~~~  214 (243)
T PRK07102        150 SAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLKLP---G--------P--LTAQPEEVAKDIFRAIEKGK  214 (243)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccCCC---c--------c--ccCCHHHHHHHHHHHHhCCC
Confidence                 67888999999999999999999999999987654310   0        0  15799999999999976543

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.4e-20  Score=171.22  Aligned_cols=156  Identities=25%  Similarity=0.336  Sum_probs=131.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+...          +.++.++++|+++.+++.
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~~~  436 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK----------GGTAHAYTCDLTDSAAVD  436 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEecCCCHHHHH
Confidence            4578999999999999999999999999999999999999888888777553          557889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH------------------hhh-----------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI------------------LSN-----------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~------------------l~~-----------------------------------  116 (222)
                      ++++.+.+.++++|++|||||...                  -+|                                   
T Consensus       437 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  516 (657)
T PRK07201        437 HTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA  516 (657)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC
Confidence            999999999999999999999631                  000                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..++++++.++.++||+||+|+||+++|+|......  +.       + .  ...+|+++|+.++..
T Consensus       517 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~--~~-------~-~--~~~~~~~~a~~i~~~  584 (657)
T PRK07201        517 PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR--YN-------N-V--PTISPEEAADMVVRA  584 (657)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc--cc-------C-C--CCCCHHHHHHHHHHH
Confidence                        7889999999999999999999999999999764321  00       0 0  157899999999987


Q ss_pred             hcC
Q psy7936         185 ALD  187 (222)
Q Consensus       185 ~~~  187 (222)
                      +..
T Consensus       585 ~~~  587 (657)
T PRK07201        585 IVE  587 (657)
T ss_pred             HHh
Confidence            644

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.85  E-value=9.8e-21  Score=152.61  Aligned_cols=155  Identities=23%  Similarity=0.221  Sum_probs=119.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++++||||++|||++++++|+++|  ..|++..|+....         .         ...++.+++||+++.++++++.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---------~---------~~~~~~~~~~Dls~~~~~~~~~   62 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---------F---------QHDNVQWHALDVTDEAEIKQLS   62 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---------c---------ccCceEEEEecCCCHHHHHHHH
Confidence            479999999999999999999985  5676667654321         0         2347788999999999988854


Q ss_pred             HHHHhhccceeEEEechhhHHh----------------------hh----------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCIL----------------------SN----------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l----------------------~~----------------------------------  116 (222)
                          +.++++|++|||||....                      +|                                  
T Consensus        63 ----~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~  138 (235)
T PRK09009         63 ----EQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSIS  138 (235)
T ss_pred             ----HhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccc
Confidence                445789999999998620                      00                                  


Q ss_pred             ----------------HHHHHHHHHhhcCC--CCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 ----------------NILFYSILFYAIPG--KNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~--~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                                      +..|+++|+.|+.+  +||+||+|+||+++|+|...+..         ..+..+  +.+|+|+|
T Consensus       139 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~--~~~~~~~a  207 (235)
T PRK09009        139 DNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQ---------NVPKGK--LFTPEYVA  207 (235)
T ss_pred             cCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhh---------ccccCC--CCCHHHHH
Confidence                            67789999999876  69999999999999999865431         112223  57999999


Q ss_pred             HHHHHHhcCCCcccccccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +.+++++.+ ..++++|+++..++.
T Consensus       208 ~~~~~l~~~-~~~~~~g~~~~~~g~  231 (235)
T PRK09009        208 QCLLGIIAN-ATPAQSGSFLAYDGE  231 (235)
T ss_pred             HHHHHHHHc-CChhhCCcEEeeCCc
Confidence            999999755 456889999955443

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2e-20  Score=152.18  Aligned_cols=168  Identities=22%  Similarity=0.221  Sum_probs=124.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      |+++||||++|||+++++.|+++|++|++++|+. +.++++.+    .         .+.++.++++|+++.++++++++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~----~---------~~~~~~~~~~D~~~~~~~~~~~~   68 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE----Q---------YNSNLTFHSLDLQDVHELETNFN   68 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh----c---------cCCceEEEEecCCCHHHHHHHHH
Confidence            6899999999999999999999999999999987 33333221    1         14478889999999999999999


Q ss_pred             HHHhhccc--e--eEEEechhhHHh-----------------hh------------------------------------
Q psy7936          94 DINQTEAN--V--HILINNAVYCIL-----------------SN------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~--i--d~li~~ag~~~l-----------------~~------------------------------------  116 (222)
                      .+.+.++.  +  +++|+|+|....                 +|                                    
T Consensus        69 ~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  148 (251)
T PRK06924         69 EILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY  148 (251)
T ss_pred             HHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC
Confidence            88766542  2  289999987420                 00                                    


Q ss_pred             ------------HHHHHHHHHhhcC--CCCeEEEEEeCCcccCCcCCCCCC---CCCc--chhhhHHHHHHHhcCChHHH
Q psy7936         117 ------------NILFYSILFYAIP--GKNVNVYAVHPGIVKTELGRYMDD---TYFP--GARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ------------~~~~~~~la~~~~--~~gI~v~~v~PG~v~T~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~p~e~  177 (222)
                                  +..+++.++.+++  +.||+|++|.||+++|++......   ..+.  .......+.++  +.+|+|+
T Consensus       149 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dv  226 (251)
T PRK06924        149 FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGK--LLSPEYV  226 (251)
T ss_pred             CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCC--cCCHHHH
Confidence                        7788899998875  468999999999999998654211   1111  01111123333  7899999


Q ss_pred             HHHHHHHhcCCCcccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~  199 (222)
                      |+.+++++.++  .+++|+++.
T Consensus       227 a~~~~~l~~~~--~~~~G~~~~  246 (251)
T PRK06924        227 AKALRNLLETE--DFPNGEVID  246 (251)
T ss_pred             HHHHHHHHhcc--cCCCCCEee
Confidence            99999997553  688999874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=4e-20  Score=149.42  Aligned_cols=177  Identities=20%  Similarity=0.198  Sum_probs=133.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +..|++|||||+++||.+++++|+++|++|++..|+. +..+.+.+.+...          +.++.++.+|+++.+++.+
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~   73 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL----------GRRAQAVQADVTDKAALEA   73 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc----------CCceEEEECCcCCHHHHHH
Confidence            4568999999999999999999999999987766654 4455555555432          4578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++.+.+.++++|++||++|...                ..|                                      
T Consensus        74 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~  153 (249)
T PRK12825         74 AVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGR  153 (249)
T ss_pred             HHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCc
Confidence            99999888899999999998432                000                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..+++.++.++.+.||+++.|.||++.|++............ ....+.++  +.+++|+++.+.+++..
T Consensus       154 ~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~dva~~~~~~~~~  230 (249)
T PRK12825        154 SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK-DAETPLGR--SGTPEDIARAVAFLCSD  230 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh-hccCCCCC--CcCHHHHHHHHHHHhCc
Confidence                     5777788888888889999999999999998765432211110 00122333  57899999999999644


Q ss_pred             CCccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYK  202 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~  202 (222)
                       .....+|+++...+
T Consensus       231 -~~~~~~g~~~~i~~  244 (249)
T PRK12825        231 -ASDYITGQVIEVTG  244 (249)
T ss_pred             -cccCcCCCEEEeCC
Confidence             45688999995444

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.84  E-value=7.6e-20  Score=150.89  Aligned_cols=158  Identities=22%  Similarity=0.273  Sum_probs=120.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |++|||||++|||.++++.|+++|++|++++|+.+.++++.    .            ..+.++.+|+++.++++++++.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~------------~~~~~~~~Dl~~~~~~~~~~~~   65 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A------------AGFTAVQLDVNDGAALARLAEE   65 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H------------CCCeEEEeeCCCHHHHHHHHHH
Confidence            68999999999999999999999999999999987655432    1            1356789999999999999999


Q ss_pred             HHhhccceeEEEechhhHHh----------------hh------------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCIL----------------SN------------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l----------------~~------------------------------------------  116 (222)
                      +.+.++++|++|||||....                +|                                          
T Consensus        66 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  145 (274)
T PRK05693         66 LEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCA  145 (274)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHH
Confidence            98888999999999996320                00                                          


Q ss_pred             ----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---------CCcchhhhHHHH---HHHhcCChHHHHHH
Q psy7936         117 ----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---------YFPGARTLGRVL---MWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~~---~~~~~~~p~e~a~~  180 (222)
                          +..++++++.+++++||+|++|+||+++|++.......         ++..........   ....+.+|+++|+.
T Consensus       146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  225 (274)
T PRK05693        146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQ  225 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence                67788999999999999999999999999987754211         010000000000   00114689999999


Q ss_pred             HHHHhcCC
Q psy7936         181 TLHCALDE  188 (222)
Q Consensus       181 i~~l~~~~  188 (222)
                      ++..+..+
T Consensus       226 i~~~~~~~  233 (274)
T PRK05693        226 LLAAVQQS  233 (274)
T ss_pred             HHHHHhCC
Confidence            99986543

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.5e-20  Score=152.49  Aligned_cols=177  Identities=24%  Similarity=0.196  Sum_probs=134.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|+++||||+++||+.++++|+++|++|++++|+.+..+++.+.+.            ..++.++.+|+++++++.
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~   74 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP------------GAKVTATVADVADPAQVE   74 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh------------cCceEEEEccCCCHHHHH
Confidence            44788999999999999999999999999999999999887766654442            226788999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH------------------------------hh---------h--------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI------------------------------LS---------N--------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~------------------------------l~---------~--------------  116 (222)
                      .+++++.+.++++|++|||+|...                              +.         .              
T Consensus        75 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~  154 (264)
T PRK12829         75 RVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY  154 (264)
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC
Confidence            999999888899999999999761                              00         0              


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC------CCcchh----hhHHHHHHHhcCCh
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT------YFPGAR----TLGRVLMWWWMKTP  174 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~------~~~~~~----~~~~~~~~~~~~~p  174 (222)
                                  +..+++.++.++...++++++|.||++.|++.......      ......    ....+..+  +.++
T Consensus       155 ~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  232 (264)
T PRK12829        155 PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGR--MVEP  232 (264)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCC--CCCH
Confidence                        46677888888877899999999999999987543221      000000    00011112  6789


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      +++|+.+.+++. +....++|+++..+
T Consensus       233 ~d~a~~~~~l~~-~~~~~~~g~~~~i~  258 (264)
T PRK12829        233 EDIAATALFLAS-PAARYITGQAISVD  258 (264)
T ss_pred             HHHHHHHHHHcC-ccccCccCcEEEeC
Confidence            999999999964 34567899988433

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.84  E-value=4.5e-20  Score=150.14  Aligned_cols=178  Identities=26%  Similarity=0.257  Sum_probs=134.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|++|||||+++||+.++++|+++|++|++++|+.+..+++.+.+...          +.++.++.+|+++.+++..+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~   70 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA----------GGSVIYLVADVTKEDEIADMIA   70 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCceEEEECCCCCHHHHHHHHH
Confidence            478999999999999999999999999999999998888777766542          4578899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHh----------------hh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCIL----------------SN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------------  116 (222)
                      .+.+.++++|++|||+|....                .|                                         
T Consensus        71 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y  150 (255)
T TIGR01963        71 AAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAY  150 (255)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchh
Confidence            998888899999999986430                00                                         


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-----CcchhhhHHHH----HHHhcCChHHHHHHH
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-----FPGARTLGRVL----MWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~----~~~~~~~p~e~a~~i  181 (222)
                            +..+++.++.++.+.+|+++.+.||++.|++........     ..........+    ......+++|+|+.+
T Consensus       151 ~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  230 (255)
T TIGR01963       151 VAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETA  230 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHH
Confidence                  567778888888888999999999999998753321110     00000000001    011267899999999


Q ss_pred             HHHhcCCCccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ++++.+ ....++|+++..++
T Consensus       231 ~~~~~~-~~~~~~g~~~~~~~  250 (255)
T TIGR01963       231 LFLASD-AAAGITGQAIVLDG  250 (255)
T ss_pred             HHHcCc-cccCccceEEEEcC
Confidence            999654 34567888875443

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.9e-20  Score=150.31  Aligned_cols=162  Identities=20%  Similarity=0.169  Sum_probs=122.5

Q ss_pred             EEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHHh
Q psy7936          18 IITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQ   97 (222)
Q Consensus        18 lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~~   97 (222)
                      +||||++|||++++++|+++|++|++++|+.+.++++.+.++.           +.++.++.+|+++.+++.++++.+  
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~--   67 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-----------GAPVRTAALDITDEAAVDAFFAEA--   67 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-----------CCceEEEEccCCCHHHHHHHHHhc--
Confidence            5999999999999999999999999999998877766655531           346788999999999999887753  


Q ss_pred             hccceeEEEechhhHHh----------------hh-------------------------------------------HH
Q psy7936          98 TEANVHILINNAVYCIL----------------SN-------------------------------------------NI  118 (222)
Q Consensus        98 ~~~~id~li~~ag~~~l----------------~~-------------------------------------------~~  118 (222)
                        +++|++|||+|....                +|                                           +.
T Consensus        68 --~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  145 (230)
T PRK07041         68 --GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALE  145 (230)
T ss_pred             --CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHH
Confidence              789999999986320                00                                           67


Q ss_pred             HHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC---cchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccc
Q psy7936         119 LFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF---PGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETG  195 (222)
Q Consensus       119 ~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G  195 (222)
                      .+++.++.++.+  |+|++++||+++|++.........   ........++.+  ..+|+|+|+.+.+++.+   .+++|
T Consensus       146 ~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l~~~---~~~~G  218 (230)
T PRK07041        146 ALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARR--VGQPEDVANAILFLAAN---GFTTG  218 (230)
T ss_pred             HHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCC--CcCHHHHHHHHHHHhcC---CCcCC
Confidence            888899998865  999999999999998664332111   011101112222  56899999999999753   47899


Q ss_pred             cccccc
Q psy7936         196 LYYSDY  201 (222)
Q Consensus       196 ~~i~~~  201 (222)
                      +.+..+
T Consensus       219 ~~~~v~  224 (230)
T PRK07041        219 STVLVD  224 (230)
T ss_pred             cEEEeC
Confidence            888433

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.2e-19  Score=143.80  Aligned_cols=155  Identities=26%  Similarity=0.332  Sum_probs=127.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+.+++++||||+++||.+++++|+++|++|++++|++++++++.+.+..           ..++.++++|+++.+++.+
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-----------~~~~~~~~~D~~~~~~~~~   71 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN-----------KGNVLGLAADVRDEADVQR   71 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc-----------cCcEEEEEccCCCHHHHHH
Confidence            35689999999999999999999999999999999999888877776643           1468889999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||+|....                +|                                      
T Consensus        72 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~  151 (237)
T PRK07326         72 AVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGA  151 (237)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCc
Confidence            999998888999999999975320                00                                      


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                              +..+++.++.++.+.|+++++|.||++.|++........          ..+  ..+++|+++.+++++..+
T Consensus       152 ~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~----------~~~--~~~~~d~a~~~~~~l~~~  219 (237)
T PRK07326        152 AYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK----------DAW--KIQPEDIAQLVLDLLKMP  219 (237)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh----------hhc--cCCHHHHHHHHHHHHhCC
Confidence                    466778888888889999999999999998765432110          011  478999999999997665

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=1.5e-19  Score=145.71  Aligned_cols=171  Identities=21%  Similarity=0.206  Sum_probs=133.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++.+|+++||||++|||.++++.|++.|++|++++|+.+..+++.+.+..           ..++.++++|+++.+++.+
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~   70 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK-----------YGNIHYVVGDVSSTESARN   70 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------cCCeEEEECCCCCHHHHHH
Confidence            46789999999999999999999999999999999999887776555543           2367889999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH-------------------------------h------hh-----------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI-------------------------------L------SN-----------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~-------------------------------l------~~-----------------  116 (222)
                      +++.+...++++|.+|+|+|...                               +      +.                 
T Consensus        71 ~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y  150 (238)
T PRK05786         71 VIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSY  150 (238)
T ss_pred             HHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHH
Confidence            99998888889999999998531                               0      00                 


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                            +..+++.++.++.++||++++|.||++.|++.....   +.    ...+.+ ....+|+++++.+++++. +..
T Consensus       151 ~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~---~~----~~~~~~-~~~~~~~~va~~~~~~~~-~~~  221 (238)
T PRK05786        151 AVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN---WK----KLRKLG-DDMAPPEDFAKVIIWLLT-DEA  221 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh---hh----hhcccc-CCCCCHHHHHHHHHHHhc-ccc
Confidence                  556778888888888999999999999998753211   00    000111 014789999999999975 456


Q ss_pred             ccccccccccc
Q psy7936         191 AKETGLYYSDY  201 (222)
Q Consensus       191 ~~~~G~~i~~~  201 (222)
                      .+.+|+.+..+
T Consensus       222 ~~~~g~~~~~~  232 (238)
T PRK05786        222 DWVDGVVIPVD  232 (238)
T ss_pred             cCccCCEEEEC
Confidence            68899887443

>PRK08324 short chain dehydrogenase; Validated

Probab=99.83  E-value=1.4e-19  Score=166.59  Aligned_cols=180  Identities=24%  Similarity=0.241  Sum_probs=139.2

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ...+.||+++||||++|||+++++.|+++|++|++++|+.+.++.+.+.+..           ..++.++.+|+++.+++
T Consensus       417 ~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~-----------~~~v~~v~~Dvtd~~~v  485 (681)
T PRK08324        417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG-----------PDRALGVACDVTDEAAV  485 (681)
T ss_pred             CcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc-----------cCcEEEEEecCCCHHHH
Confidence            3456899999999999999999999999999999999999888777666543           14688999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH-------------------------hhh---------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI-------------------------LSN---------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~-------------------------l~~---------------------------  116 (222)
                      .++++.+.+.++++|++|||||...                         +..                           
T Consensus       486 ~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~  565 (681)
T PRK08324        486 QAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG  565 (681)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC
Confidence            9999999888999999999999432                         000                           


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcc--cCCcCCCCCCCCC-------cc----hhhhHHHHHHHhc
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIV--KTELGRYMDDTYF-------PG----ARTLGRVLMWWWM  171 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v--~T~~~~~~~~~~~-------~~----~~~~~~~~~~~~~  171 (222)
                                  +..+++.++.++.++||+||+|+||.+  .|++.........       ..    ......++.+  .
T Consensus       566 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~--~  643 (681)
T PRK08324        566 PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKR--E  643 (681)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCC--c
Confidence                        678889999999999999999999999  8887653221100       00    0001112222  5


Q ss_pred             CChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         172 KTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       172 ~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .+|+|+|+.+.+++. +.....+|+.+..++
T Consensus       644 v~~~DvA~a~~~l~s-~~~~~~tG~~i~vdg  673 (681)
T PRK08324        644 VTPEDVAEAVVFLAS-GLLSKTTGAIITVDG  673 (681)
T ss_pred             cCHHHHHHHHHHHhC-ccccCCcCCEEEECC
Confidence            789999999999964 445688999885443

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.3e-19  Score=143.86  Aligned_cols=138  Identities=21%  Similarity=0.229  Sum_probs=111.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |+++|||+++|||.++++.|+++|++|++++|+.+..+++.    .           ..++.++.+|+++.++++++++.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~-----------~~~~~~~~~D~~d~~~~~~~~~~   66 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ----A-----------LPGVHIEKLDMNDPASLDQLLQR   66 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH----h-----------ccccceEEcCCCCHHHHHHHHHH
Confidence            68999999999999999999999999999999987654432    1           12456788999999999999988


Q ss_pred             HHhhccceeEEEechhhHHh------------------hh----------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCIL------------------SN----------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l------------------~~----------------------------------------  116 (222)
                      +.+  +++|++|||||....                  +|                                        
T Consensus        67 ~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~  144 (225)
T PRK08177         67 LQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEM  144 (225)
T ss_pred             hhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCc
Confidence            754  479999999987420                  00                                        


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..+++.++.+++++||+||+|+||+++|+|.....                  ..++++.+..++.++..
T Consensus       145 ~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~~------------------~~~~~~~~~~~~~~~~~  206 (225)
T PRK08177        145 PLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNA------------------PLDVETSVKGLVEQIEA  206 (225)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCCC------------------CCCHHHHHHHHHHHHHh
Confidence                     788999999999999999999999999999975432                  24677777777777533

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.3e-18  Score=143.56  Aligned_cols=162  Identities=20%  Similarity=0.260  Sum_probs=122.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      .|++|||||++|||++++++|++.|++|++++|+.+.++++.+.+             +.++.++++|+++.+++.++++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~~~~   68 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-------------GDRLWVLQLDVTDSAAVRAVVD   68 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------------cCceEEEEccCCCHHHHHHHHH
Confidence            378999999999999999999999999999999987766554332             3367889999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHh----------------hh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCIL----------------SN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------------  116 (222)
                      .+.+.++++|++|||||....                +|                                         
T Consensus        69 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  148 (276)
T PRK06482         69 RAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLY  148 (276)
T ss_pred             HHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchh
Confidence            988888999999999986430                01                                         


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchh------hhHHHH--HH-HhcCChHHHHHHH
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGAR------TLGRVL--MW-WWMKTPEQGAQTT  181 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~------~~~~~~--~~-~~~~~p~e~a~~i  181 (222)
                            +..+++.++.++.+.||+++.+.||++.|++.............      .....+  +. ....+|+++++.+
T Consensus       149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~  228 (276)
T PRK06482        149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAM  228 (276)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHH
Confidence                  57788888888888999999999999999986644322111000      000000  00 0126899999999


Q ss_pred             HHHhcCC
Q psy7936         182 LHCALDE  188 (222)
Q Consensus       182 ~~l~~~~  188 (222)
                      +.++..+
T Consensus       229 ~~~~~~~  235 (276)
T PRK06482        229 IASADQT  235 (276)
T ss_pred             HHHHcCC
Confidence            9997543

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.81  E-value=4.5e-19  Score=144.20  Aligned_cols=177  Identities=27%  Similarity=0.332  Sum_probs=132.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH--HHHHHHHHHHhhhhhcccCCCC-CeEEEEecCCCC-hh
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK--AETTASEIRKHFEVATSEDKKP-GEVLIKKLDLAS-FK   86 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~D~~~-~~   86 (222)
                      .+++|+++||||++|||+++|+.|++.|+.|+++.|+.+.  .+.+.+... .         .. ..+.+..+|+++ .+
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~Dvs~~~~   71 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E---------AGGGRAAAVAADVSDDEE   71 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h---------cCCCcEEEEEecCCCCHH
Confidence            4678999999999999999999999999998888887654  333333333 1         12 478888999998 99


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------------------------h--h--------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------------------------S--N--------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------------------------~--~--------------  116 (222)
                      +++.+++.+.+.++++|++|||||+...                                  .  .              
T Consensus        72 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~~~~~  151 (251)
T COG1028          72 SVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGLGGPP  151 (251)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhcCCCC
Confidence            9999999999999999999999998520                                  0  0              


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc--chhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP--GARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                 +..|++.++.++.++||+||+|+||+++|++..........  .......+..  +...|++++..+.+
T Consensus       152 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  229 (251)
T COG1028         152 GQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLG--RLGTPEEVAAAVAF  229 (251)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCC--CCcCHHHHHHHHHH
Confidence                       78889999999999999999999999999998865432200  0000000111  25678899999998


Q ss_pred             HhcCCCcccccccccc
Q psy7936         184 CALDEGAAKETGLYYS  199 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~  199 (222)
                      +.......+++|+.+.
T Consensus       230 ~~~~~~~~~~~g~~~~  245 (251)
T COG1028         230 LASDEAASYITGQTLP  245 (251)
T ss_pred             HcCcchhccccCCEEE
Confidence            8544334566776653

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.81  E-value=3.4e-19  Score=143.49  Aligned_cols=171  Identities=27%  Similarity=0.311  Sum_probs=129.8

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +||||++++||..+++.|+++|++|++++|+. +.++...+.++.          .+.++.++.+|+++..+++++++.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~   70 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKA----------YGVKALGVVCDVSDREDVKAVVEEI   70 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh----------cCCceEEEEecCCCHHHHHHHHHHH
Confidence            58999999999999999999999999999875 555555555543          2457889999999999999999999


Q ss_pred             HhhccceeEEEechhhHHh----------------hh-------------------------------------------
Q psy7936          96 NQTEANVHILINNAVYCIL----------------SN-------------------------------------------  116 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l----------------~~-------------------------------------------  116 (222)
                      .+.++++|++|||+|....                .|                                           
T Consensus        71 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~  150 (239)
T TIGR01830        71 EEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAA  150 (239)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHH
Confidence            8888999999999997420                00                                           


Q ss_pred             ----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccc
Q psy7936         117 ----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAK  192 (222)
Q Consensus       117 ----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~  192 (222)
                          +..+++.++.++...|++++++.||+++|++....... .........+..+  ..+++|+++.+++++.+ ...+
T Consensus       151 ~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~a~~~~~~~~~-~~~~  226 (239)
T TIGR01830       151 SKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEK-VKKKILSQIPLGR--FGTPEEVANAVAFLASD-EASY  226 (239)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChH-HHHHHHhcCCcCC--CcCHHHHHHHHHHHhCc-ccCC
Confidence                46688888888888899999999999999876543311 0001101112222  56899999999999643 4567


Q ss_pred             ccccccccc
Q psy7936         193 ETGLYYSDY  201 (222)
Q Consensus       193 ~~G~~i~~~  201 (222)
                      .+|+++..+
T Consensus       227 ~~g~~~~~~  235 (239)
T TIGR01830       227 ITGQVIHVD  235 (239)
T ss_pred             cCCCEEEeC
Confidence            899887543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.81  E-value=6.5e-19  Score=142.66  Aligned_cols=144  Identities=23%  Similarity=0.239  Sum_probs=115.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++++||||++|||.+++++|+++|++|++++|+.+.++++.+.              ..++.+++||+++.++++++++.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~   67 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ--------------SANIFTLAFDVTDHPGTKAALSQ   67 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh--------------cCCCeEEEeeCCCHHHHHHHHHh
Confidence            6899999999999999999999999999999998776554322              23577899999999999999887


Q ss_pred             HHhhccceeEEEechhhHH----------------hhh------------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCI----------------LSN------------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~----------------l~~------------------------------------------  116 (222)
                      +..   .+|.+|||||...                .+|                                          
T Consensus        68 ~~~---~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as  144 (240)
T PRK06101         68 LPF---IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGAS  144 (240)
T ss_pred             ccc---CCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHH
Confidence            642   4799999998532                000                                          


Q ss_pred             ---HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 ---NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 ---~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                         +..+++.++.++.++||++++|.||++.|+|.......         .+  .  ..+|+++|+.++..+...
T Consensus       145 K~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~---------~~--~--~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        145 KAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFA---------MP--M--IITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCC---------CC--c--ccCHHHHHHHHHHHHhcC
Confidence               78899999999999999999999999999987643210         01  0  468999999999886554

>KOG1014|consensus

Probab=99.79  E-value=3.1e-18  Score=139.68  Aligned_cols=147  Identities=29%  Similarity=0.393  Sum_probs=120.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH-HH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD-CA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~-~~   92 (222)
                      |+.++|||||.|||++.|++||++|.+|++++|++++++.+.++|++..         ..++.++.+|+++...+-+ +.
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~---------~vev~~i~~Dft~~~~~ye~i~  119 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY---------KVEVRIIAIDFTKGDEVYEKLL  119 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh---------CcEEEEEEEecCCCchhHHHHH
Confidence            5899999999999999999999999999999999999999999998874         5789999999999887333 33


Q ss_pred             HHHHhhccceeEEEechhhHHh-------------hh-------------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCIL-------------SN-------------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l-------------~~-------------------------------------------  116 (222)
                      +.+..  ..+-+||||+|...-             .|                                           
T Consensus       120 ~~l~~--~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~  197 (312)
T KOG1014|consen  120 EKLAG--LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLL  197 (312)
T ss_pred             HHhcC--CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhH
Confidence            33321  378899999998870             00                                           


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                               +..|+++|+.|++.+||.|-++.|.+|-|+|.....+..+              ..+|+..|...+.-.
T Consensus       198 s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~sl~--------------~ps~~tfaksal~ti  261 (312)
T KOG1014|consen  198 SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKPSLF--------------VPSPETFAKSALNTI  261 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCCCCc--------------CcCHHHHHHHHHhhc
Confidence                     7888999999999999999999999999999886553211              456777776666653

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.2e-18  Score=139.60  Aligned_cols=156  Identities=20%  Similarity=0.211  Sum_probs=112.8

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH-
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD-   94 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-   94 (222)
                      +++||||++|||.+++++|+++|++|++++|+.+..  +    ...         .+.++.++++|+++.+++++++.. 
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~   67 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA---------AGERLAEVELDLSDAAAAAAWLAGD   67 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc---------cCCeEEEEEeccCCHHHHHHHHHHH
Confidence            699999999999999999999999999999986531  1    111         245788999999999999997766 


Q ss_pred             HHhhc---cceeEEEechhhHHh--------------------------hh-----------------------------
Q psy7936          95 INQTE---ANVHILINNAVYCIL--------------------------SN-----------------------------  116 (222)
Q Consensus        95 i~~~~---~~id~li~~ag~~~l--------------------------~~-----------------------------  116 (222)
                      +.+.+   +++|++|||+|....                          ..                             
T Consensus        68 ~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  147 (243)
T PRK07023         68 LLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGW  147 (243)
T ss_pred             HHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCc
Confidence            44433   479999999986420                          00                             


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---CCcch--hhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---YFPGA--RTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                               +..+++.++.+ .+.||++++|+||+++|++.......   .+...  .....+.++  ..+|+|+|..++
T Consensus       148 ~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~va~~~~  224 (243)
T PRK07023        148 SVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGA--LSTPEDAARRLI  224 (243)
T ss_pred             hHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCC--CCCHHHHHHHHH
Confidence                     67888888888 77899999999999999986532111   11111  111223333  689999999655


Q ss_pred             HHhcCCC
Q psy7936         183 HCALDEG  189 (222)
Q Consensus       183 ~l~~~~~  189 (222)
                      ..+.++.
T Consensus       225 ~~l~~~~  231 (243)
T PRK07023        225 AYLLSDD  231 (243)
T ss_pred             HHHhccc
Confidence            4445654

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.4e-18  Score=135.43  Aligned_cols=135  Identities=20%  Similarity=0.295  Sum_probs=107.1

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||++|||++++++|+++ ++|++++|+..                           .++||+++.++++++++.+
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------------------------~~~~D~~~~~~~~~~~~~~   53 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------------------------DVQVDITDPASIRALFEKV   53 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------------------------ceEecCCChHHHHHHHHhc
Confidence            6999999999999999999999 99999998742                           3578999999999887653


Q ss_pred             HhhccceeEEEechhhHHh----------------hh-------------------------------------------
Q psy7936          96 NQTEANVHILINNAVYCIL----------------SN-------------------------------------------  116 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l----------------~~-------------------------------------------  116 (222)
                          +++|++|||||....                +|                                           
T Consensus        54 ----~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  129 (199)
T PRK07578         54 ----GKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVN  129 (199)
T ss_pred             ----CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHH
Confidence                789999999986430                00                                           


Q ss_pred             --HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccccc
Q psy7936         117 --NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKET  194 (222)
Q Consensus       117 --~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~  194 (222)
                        +..|++.++.|+ ++||+||+|+||+++|+|.....  .+..        ..  ..+|+|+|+.+.+++.    ...+
T Consensus       130 ~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~--~~~~--------~~--~~~~~~~a~~~~~~~~----~~~~  192 (199)
T PRK07578        130 GALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYGP--FFPG--------FE--PVPAARVALAYVRSVE----GAQT  192 (199)
T ss_pred             HHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhhh--cCCC--------CC--CCCHHHHHHHHHHHhc----ccee
Confidence              789999999999 88999999999999999753221  0000        01  5789999999998863    2568


Q ss_pred             ccccc
Q psy7936         195 GLYYS  199 (222)
Q Consensus       195 G~~i~  199 (222)
                      |+.|.
T Consensus       193 g~~~~  197 (199)
T PRK07578        193 GEVYK  197 (199)
T ss_pred             eEEec
Confidence            87663

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.1e-18  Score=138.12  Aligned_cols=148  Identities=20%  Similarity=0.132  Sum_probs=108.3

Q ss_pred             CCcCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEec
Q psy7936           1 MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKL   80 (222)
Q Consensus         1 ~~~~~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (222)
                      |+....|+-..+++|+++||||++|||++++++|+++|++|++++|+.....+   ...           .. ...++.+
T Consensus         1 ~~~~~~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~~-----------~~-~~~~~~~   65 (245)
T PRK12367          1 MPQADPMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SND-----------ES-PNEWIKW   65 (245)
T ss_pred             CCCcchhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hhc-----------cC-CCeEEEe
Confidence            44555556677899999999999999999999999999999999998732111   110           01 1256789


Q ss_pred             CCCChhhHHHHHHHHHhhccceeEEEechhhHHh-------------hh-------------------------------
Q psy7936          81 DLASFKSIRDCAQDINQTEANVHILINNAVYCIL-------------SN-------------------------------  116 (222)
Q Consensus        81 D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l-------------~~-------------------------------  116 (222)
                      |+++.+++.+       .++++|++|||||....             +|                               
T Consensus        66 D~~~~~~~~~-------~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss  138 (245)
T PRK12367         66 ECGKEESLDK-------QLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTS  138 (245)
T ss_pred             eCCCHHHHHH-------hcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEec
Confidence            9999987753       34689999999997430             00                               


Q ss_pred             ------------------H---HHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChH
Q psy7936         117 ------------------N---ILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 ------------------~---~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  175 (222)
                                        +   ..+.+.++.++.+.||+|+++.||+++|++...                 .  ..+|+
T Consensus       139 ~a~~~~~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~-----------------~--~~~~~  199 (245)
T PRK12367        139 EAEIQPALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNPI-----------------G--IMSAD  199 (245)
T ss_pred             ccccCCCCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCcc-----------------C--CCCHH
Confidence                              1   233344555667889999999999999987321                 0  46899


Q ss_pred             HHHHHHHHHhcCCC
Q psy7936         176 QGAQTTLHCALDEG  189 (222)
Q Consensus       176 e~a~~i~~l~~~~~  189 (222)
                      ++|+.+++++..++
T Consensus       200 ~vA~~i~~~~~~~~  213 (245)
T PRK12367        200 FVAKQILDQANLGL  213 (245)
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999975543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.77  E-value=1.3e-17  Score=134.52  Aligned_cols=142  Identities=29%  Similarity=0.388  Sum_probs=114.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      +.+.+++++||||+++||+++|+.|+++|+ +|++++|+.+..++       .          +.++.++.+|+++.+++
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~----------~~~~~~~~~D~~~~~~~   64 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------L----------GPRVVPLQLDVTDPASV   64 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------c----------CCceEEEEecCCCHHHH
Confidence            456789999999999999999999999999 99999999876543       1          34688999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH-----------------hhh-----------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI-----------------LSN-----------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~-----------------------------------  116 (222)
                      .++++..    +++|++||++|...                 .+|                                   
T Consensus        65 ~~~~~~~----~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~  140 (238)
T PRK08264         65 AAAAEAA----SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF  140 (238)
T ss_pred             HHHHHhc----CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC
Confidence            8877653    67999999999821                 000                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  ...+++.++.++.+.||+++++.||.++|++.......                ..+++++++.++..
T Consensus       141 ~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~----------------~~~~~~~a~~~~~~  204 (238)
T PRK08264        141 PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDAP----------------KASPADVARQILDA  204 (238)
T ss_pred             CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCcC----------------CCCHHHHHHHHHHH
Confidence                        56778888889888899999999999999986544311                36788999999888


Q ss_pred             hcCC
Q psy7936         185 ALDE  188 (222)
Q Consensus       185 ~~~~  188 (222)
                      +...
T Consensus       205 ~~~~  208 (238)
T PRK08264        205 LEAG  208 (238)
T ss_pred             HhCC
Confidence            6543

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5.1e-17  Score=132.42  Aligned_cols=159  Identities=20%  Similarity=0.189  Sum_probs=115.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|++|||||++|||+++++.|++.|++|++++|+.+..+++.+.....          +.++.++++|+++.+++.+++.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR----------GLALRVEKLDLTDAIDRAQAAE   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcceEEEeeCCCHHHHHHHhc
Confidence            578999999999999999999999999999999988777766655442          4468889999999988877643


Q ss_pred             HHHhhccceeEEEechhhHH----------------hhh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCI----------------LSN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------------  116 (222)
                            +++|++|||||...                .+|                                         
T Consensus        72 ------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y  145 (257)
T PRK09291         72 ------WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAY  145 (257)
T ss_pred             ------CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchh
Confidence                  37999999998532                000                                         


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC--CCcchhhhHHH--HH--HHhcCChHHHHHHHHHH
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT--YFPGARTLGRV--LM--WWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~--~~--~~~~~~p~e~a~~i~~l  184 (222)
                            +..+++.++.++.+.||++++|.||++.|++.......  .+........+  ..  .....++++++..++.+
T Consensus       146 ~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (257)
T PRK09291        146 CASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEV  225 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHH
Confidence                  56777788888888899999999999999886543221  11100000001  00  11135899999999888


Q ss_pred             hcCC
Q psy7936         185 ALDE  188 (222)
Q Consensus       185 ~~~~  188 (222)
                      +.++
T Consensus       226 l~~~  229 (257)
T PRK09291        226 IPAD  229 (257)
T ss_pred             hcCC
Confidence            6554

>PRK08017 oxidoreductase; Provisional

Probab=99.75  E-value=7e-17  Score=131.57  Aligned_cols=157  Identities=22%  Similarity=0.269  Sum_probs=117.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |+++||||++|||.++++.|+++|++|++++|+.++++.+.    .            ..+.++++|+++.+++..+++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~------------~~~~~~~~D~~~~~~~~~~~~~   66 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----S------------LGFTGILLDLDDPESVERAADE   66 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----h------------CCCeEEEeecCCHHHHHHHHHH
Confidence            68999999999999999999999999999999987665432    1            1356789999999999999888


Q ss_pred             HHhhc-cceeEEEechhhHH-------------------------hh----h----------------------------
Q psy7936          95 INQTE-ANVHILINNAVYCI-------------------------LS----N----------------------------  116 (222)
Q Consensus        95 i~~~~-~~id~li~~ag~~~-------------------------l~----~----------------------------  116 (222)
                      +.+.. +++|.+|||+|...                         +.    .                            
T Consensus        67 i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y  146 (256)
T PRK08017         67 VIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAY  146 (256)
T ss_pred             HHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHH
Confidence            86643 68999999998632                         00    0                            


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                            +..+.++++.++.+.||++++|.||++.|++............. ......+....+|+|+++.+..++..+
T Consensus       147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~a~~~~~~~~~~  223 (256)
T PRK08017        147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPV-ENPGIAARFTLGPEAVVPKLRHALESP  223 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccch-hhhHHHhhcCCCHHHHHHHHHHHHhCC
Confidence                  46677788888888999999999999999987654321100000 001111112479999999999997554

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5.4e-17  Score=129.86  Aligned_cols=149  Identities=20%  Similarity=0.229  Sum_probs=115.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |+++|||++++||.++++.|++.|++|++++|+.+..+++.    ..            .+.++.+|+++.++++++++.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~------------~~~~~~~D~~~~~~v~~~~~~   65 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL------------GAEALALDVADPASVAGLAWK   65 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc------------cceEEEecCCCHHHHHHHHHH
Confidence            58999999999999999999999999999999987655432    11            245789999999999998776


Q ss_pred             HHhhccceeEEEechhhHHh--------h----------h----------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCIL--------S----------N----------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l--------~----------~----------------------------------------  116 (222)
                      +..  .++|++|||+|....        .          |                                        
T Consensus        66 ~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  143 (222)
T PRK06953         66 LDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTG  143 (222)
T ss_pred             hcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCc
Confidence            632  479999999998620        0          0                                        


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..+++.++.++  .+++||+|+||+++|+|.....                  ..++++.+..++.++..
T Consensus       144 ~~Y~~sK~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~~------------------~~~~~~~~~~~~~~~~~  203 (222)
T PRK06953        144 WLYRASKAALNDALRAASLQA--RHATCIALHPGWVRTDMGGAQA------------------ALDPAQSVAGMRRVIAQ  203 (222)
T ss_pred             cccHHhHHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCCC------------------CCCHHHHHHHHHHHHHh
Confidence                     445555555554  4799999999999999976533                  45789999999988655


Q ss_pred             CCccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYK  202 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~  202 (222)
                      . ....+|.++..++
T Consensus       204 ~-~~~~~~~~~~~~~  217 (222)
T PRK06953        204 A-TRRDNGRFFQYDG  217 (222)
T ss_pred             c-CcccCceEEeeCC
Confidence            4 4688898886543

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.73  E-value=1.3e-16  Score=135.23  Aligned_cols=159  Identities=14%  Similarity=0.004  Sum_probs=120.3

Q ss_pred             CCCEEEEecCCCchHHH--HHHHHHhCCCEEEEEeCChhH------------HHHHHHHHHHhhhhhcccCCCCCeEEEE
Q psy7936          13 DGKTVIITGCNTGIGKV--TAQTLYGIGAKVIMACRDVEK------------AETTASEIRKHFEVATSEDKKPGEVLIK   78 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~--~a~~l~~~g~~v~~~~r~~~~------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~   78 (222)
                      -+|++||||+++|||.+  +|+.| +.|++++++++..+.            .+.+.+.++.          .+..+..+
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~----------~G~~a~~i  108 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA----------AGLYAKSI  108 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh----------cCCceEEE
Confidence            46899999999999999  89999 999998888854322            1223333332          24567889


Q ss_pred             ecCCCChhhHHHHHHHHHhhccceeEEEechhhHH----------------------------------------hh---
Q psy7936          79 KLDLASFKSIRDCAQDINQTEANVHILINNAVYCI----------------------------------------LS---  115 (222)
Q Consensus        79 ~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------------------------------l~---  115 (222)
                      .||+++.+++.++++.+.+.++++|+||||+|...                                        ++   
T Consensus       109 ~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~e  188 (398)
T PRK13656        109 NGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEE  188 (398)
T ss_pred             EcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHH
Confidence            99999999999999999999999999999999883                                        00   


Q ss_pred             -----------------h----------------------------------------HHHHHHHHHhhcCCCCeEEEEE
Q psy7936         116 -----------------N----------------------------------------NILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus       116 -----------------~----------------------------------------~~~~~~~la~~~~~~gI~v~~v  138 (222)
                                       .                                        +...++.|+.++++.|||+|++
T Consensus       189 i~~Tv~vMggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i  268 (398)
T PRK13656        189 IADTVKVMGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVS  268 (398)
T ss_pred             HHHHHHhhccchHHHHHHHHHhcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEE
Confidence                             0                                        7888999999999999999999


Q ss_pred             eCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         139 HPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       139 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                      ++|++.|......+.-+....  ......+. .++=|.+.+.+..|.
T Consensus       269 ~~g~~~T~Ass~Ip~~~ly~~--~l~kvmk~-~g~he~~ieq~~rl~  312 (398)
T PRK13656        269 VLKAVVTQASSAIPVMPLYIS--LLFKVMKE-KGTHEGCIEQIYRLF  312 (398)
T ss_pred             ecCcccchhhhcCCCcHHHHH--HHHHHHHh-cCCCCChHHHHHHHH
Confidence            999999999988864322212  22222221 345666666666664

>KOG1209|consensus

Probab=99.72  E-value=3.7e-17  Score=126.54  Aligned_cols=123  Identities=24%  Similarity=0.282  Sum_probs=106.9

Q ss_pred             CCCEEEEecCC-CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCN-TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ..|.++|||++ ||||.++++.|++.|+.|+.+.|+.+...++...               ..+..+++|+++++++.++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~---------------~gl~~~kLDV~~~~~V~~v   70 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ---------------FGLKPYKLDVSKPEEVVTV   70 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh---------------hCCeeEEeccCChHHHHHH
Confidence            35788888888 8999999999999999999999999887766532               2467899999999999999


Q ss_pred             HHHHHh-hccceeEEEechhhHH-----------------------------h-----------hh--------------
Q psy7936          92 AQDINQ-TEANVHILINNAVYCI-----------------------------L-----------SN--------------  116 (222)
Q Consensus        92 ~~~i~~-~~~~id~li~~ag~~~-----------------------------l-----------~~--------------  116 (222)
                      ..++++ .+|++|+|+||||..-                             +           +|              
T Consensus        71 ~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~  150 (289)
T KOG1209|consen   71 SGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGS  150 (289)
T ss_pred             HHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhh
Confidence            999988 6799999999998754                             0           00              


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRY  150 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~  150 (222)
                              ++.+++.|..|+++.||+|..+-||-|.|+....
T Consensus       151 iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  151 IYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             hhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence                    7899999999999999999999999999998775

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.71  E-value=1.6e-16  Score=121.28  Aligned_cols=89  Identities=34%  Similarity=0.452  Sum_probs=82.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC--hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD--VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |+++||||++|||++++++|+++|. .|++++|+  .+..+++.+.++.          ++.++.+++||+++.++++++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~----------~~~~~~~~~~D~~~~~~~~~~   70 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKA----------PGAKITFIECDLSDPESIRAL   70 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHH----------TTSEEEEEESETTSHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccc----------ccccccccccccccccccccc
Confidence            6899999999999999999999966 89999999  7788888888875          468999999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++++.+.++++|++|||+|...
T Consensus        71 ~~~~~~~~~~ld~li~~ag~~~   92 (167)
T PF00106_consen   71 IEEVIKRFGPLDILINNAGIFS   92 (167)
T ss_dssp             HHHHHHHHSSESEEEEECSCTT
T ss_pred             cccccccccccccccccccccc
Confidence            9999999999999999999988

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1610|consensus

Probab=99.70  E-value=4e-16  Score=127.54  Aligned_cols=128  Identities=29%  Similarity=0.403  Sum_probs=110.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|.++|||+-+|+|..+|++|.++|+.|+..+.+++..+++..+..            ..+...+++|++++++|+
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~------------s~rl~t~~LDVT~~esi~   92 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK------------SPRLRTLQLDVTKPESVK   92 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc------------CCcceeEeeccCCHHHHH
Confidence            45688999999999999999999999999999999988877777665542            347778899999999999


Q ss_pred             HHHHHHHhhc--cceeEEEechhhHHh-----------------hh----------------------------------
Q psy7936          90 DCAQDINQTE--ANVHILINNAVYCIL-----------------SN----------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~--~~id~li~~ag~~~l-----------------~~----------------------------------  116 (222)
                      ++.+.+.+..  ..+..+|||||+...                 +|                                  
T Consensus        93 ~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~  172 (322)
T KOG1610|consen   93 EAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVAL  172 (322)
T ss_pred             HHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccC
Confidence            9998887764  359999999997750                 00                                  


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCC
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGR  149 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~  149 (222)
                                  +..|+.+|..|+.+.||+|..|.||.+.|++..
T Consensus       173 p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  173 PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence                        899999999999999999999999999999986

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.70  E-value=3.8e-16  Score=138.74  Aligned_cols=169  Identities=14%  Similarity=0.115  Sum_probs=115.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ..||+++||||+||||++++++|++.|++|++++|+.+.++.+.+.+..... .........++.++.+|+++.+++.+.
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L-~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKL-DVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhcc-ccccccccCceEEEEecCCCHHHHHHH
Confidence            4689999999999999999999999999999999999988877766543100 000000123688999999998887653


Q ss_pred             HHHHHhhccceeEEEechhhHH----------hhh------------------------------------------HHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI----------LSN------------------------------------------NIL  119 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~----------l~~------------------------------------------~~~  119 (222)
                             ++.+|+||||+|...          .+|                                          ...
T Consensus       157 -------LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~  229 (576)
T PLN03209        157 -------LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLC  229 (576)
T ss_pred             -------hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHH
Confidence                   357899999998642          000                                          112


Q ss_pred             HHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcc
Q psy7936         120 FYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAA  191 (222)
Q Consensus       120 ~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~  191 (222)
                      +.+.+..++.+.||+++.|.||++.|++............. ...++++  ..+++|+|+.+++++.++...
T Consensus       230 ~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~-~d~~~gr--~isreDVA~vVvfLasd~~as  298 (576)
T PLN03209        230 WKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSE-EDTLFGG--QVSNLQVAELMACMAKNRRLS  298 (576)
T ss_pred             HHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeecc-ccccCCC--ccCHHHHHHHHHHHHcCchhc
Confidence            33455566777899999999999998865421111110000 1123333  578999999999998766433

>KOG1210|consensus

Probab=99.70  E-value=3.6e-16  Score=127.60  Aligned_cols=162  Identities=17%  Similarity=0.113  Sum_probs=131.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      +.++|||+++|||+++|..+...|++|.++.|+..++.++++.++-..        ...++.+..+|+.|.+++...+++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~--------~~~~v~~~S~d~~~Y~~v~~~~~~  105 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLT--------QVEDVSYKSVDVIDYDSVSKVIEE  105 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhh--------ccceeeEeccccccHHHHHHHHhh
Confidence            589999999999999999999999999999999999999999987654        233488999999999999999999


Q ss_pred             HHhhccceeEEEechhhHH----------------hhh------------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCI----------------LSN------------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~----------------l~~------------------------------------------  116 (222)
                      +.+..+++|.+|||||...                -+|                                          
T Consensus       106 l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaY  185 (331)
T KOG1210|consen  106 LRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAY  185 (331)
T ss_pred             hhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccccccc
Confidence            9999999999999999877                000                                          


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                            +.++..+++.|+.++||+|..+.|+.++|+.................-+. -  ..++||.|..++.=+..
T Consensus       186 s~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~s-s--~~~~e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  186 SPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGS-S--VIKCEEMAKAIVKGMKR  259 (331)
T ss_pred             ccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCC-C--CcCHHHHHHHHHhHHhh
Confidence                  78899999999999999999999999999977654432111111000000 1  46899999998876544

>KOG1478|consensus

Probab=99.69  E-value=2.2e-16  Score=125.06  Aligned_cols=93  Identities=24%  Similarity=0.358  Sum_probs=85.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCC-----CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCC--CCeEEEEecCCCCh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIG-----AKVIMACRDVEKAETTASEIRKHFEVATSEDKK--PGEVLIKKLDLASF   85 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~D~~~~   85 (222)
                      .+|+++|||+++|||.+|+.+|.+..     .++++++||.++.++++..++..+        |  ..++.+++.|++++
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~--------p~~~i~~~yvlvD~sNm   73 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFH--------PKSTIEVTYVLVDVSNM   73 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhC--------CCceeEEEEEEEehhhH
Confidence            46899999999999999999999864     368889999999999999998875        4  55789999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .|+.++.+++.+++.++|.+..|||.++
T Consensus        74 ~Sv~~A~~di~~rf~~ld~iylNAg~~~  101 (341)
T KOG1478|consen   74 QSVFRASKDIKQRFQRLDYIYLNAGIMP  101 (341)
T ss_pred             HHHHHHHHHHHHHhhhccEEEEccccCC
Confidence            9999999999999999999999999988

>PRK06720 hypothetical protein; Provisional

Probab=99.69  E-value=4.2e-16  Score=119.83  Aligned_cols=94  Identities=31%  Similarity=0.360  Sum_probs=83.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +.+++|+++||||++|||+++++.|++.|++|++++|+.+.+++..+++...          +.+..++.+|+++.+++.
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~~~~~v~   81 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL----------GGEALFVSYDMEKQGDWQ   81 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHHH
Confidence            4478999999999999999999999999999999999988887777777542          456778899999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++++.+.+.++++|++|||||+..
T Consensus        82 ~~v~~~~~~~G~iDilVnnAG~~~  105 (169)
T PRK06720         82 RVISITLNAFSRIDMLFQNAGLYK  105 (169)
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCC
Confidence            999999889999999999999654

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.69  E-value=5.7e-16  Score=123.82  Aligned_cols=148  Identities=24%  Similarity=0.257  Sum_probs=109.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      .|+++||||+++||+.+++.|+++ ++|++++|+.+..+++.+..              ..+.++++|+++.+++.++++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~--------------~~~~~~~~D~~~~~~~~~~~~   67 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL--------------PGATPFPVDLTDPEAIAAAVE   67 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh--------------ccceEEecCCCCHHHHHHHHH
Confidence            478999999999999999999999 99999999987655443321              146688999999999988876


Q ss_pred             HHHhhccceeEEEechhhHHh----------------hh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCIL----------------SN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------------  116 (222)
                      .+    +++|++||++|....                .|                                         
T Consensus        68 ~~----~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~  143 (227)
T PRK08219         68 QL----GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYA  143 (227)
T ss_pred             hc----CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHH
Confidence            54    479999999986420                00                                         


Q ss_pred             -----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 -----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 -----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                           +..+++.++.++... |++++|.||+++|++...........     .+..+  +.+++|+|+.+++++..+
T Consensus       144 ~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~dva~~~~~~l~~~  212 (227)
T PRK08219        144 ASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEGGE-----YDPER--YLRPETVAKAVRFAVDAP  212 (227)
T ss_pred             HHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhccc-----cCCCC--CCCHHHHHHHHHHHHcCC
Confidence                 566677777776655 99999999999988755432111000     01111  579999999999997554

>KOG1204|consensus

Probab=99.67  E-value=6.2e-17  Score=126.40  Aligned_cols=177  Identities=15%  Similarity=0.121  Sum_probs=124.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+|++|+||+|+|||..++..+...+......+++....+  .+.++..         .+........|+....-+..+.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~---------~gd~~v~~~g~~~e~~~l~al~   73 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVA---------YGDDFVHVVGDITEEQLLGALR   73 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEE---------ecCCcceechHHHHHHHHHHHH
Confidence            4678999999999999988888877654444333332221  1111111         1233445556777777777888


Q ss_pred             HHHHhhccceeEEEechhhHHhhh--------------------------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCILSN--------------------------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~--------------------------------------------------------  116 (222)
                      +..++..+..|++|||||...-+.                                                        
T Consensus        74 e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~  153 (253)
T KOG1204|consen   74 EAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFS  153 (253)
T ss_pred             hhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhcccc
Confidence            888888899999999999988111                                                        


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc--chhhhHHH-HHHHhcCChHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP--GARTLGRV-LMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~p~e~a~~i~  182 (222)
                                 ..+|.+.||.|-. .+|+|.++.||.+||+|+....++...  ...+.... .....+.+|...|..+.
T Consensus       154 ~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~  232 (253)
T KOG1204|consen  154 SWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLA  232 (253)
T ss_pred             HHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHH
Confidence                       7888888888876 799999999999999999887665421  11111111 11233889999999999


Q ss_pred             HHhcCCCcccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      .|+....  +.+|+|++++..
T Consensus       233 ~L~e~~~--f~sG~~vdy~D~  251 (253)
T KOG1204|consen  233 KLLEKGD--FVSGQHVDYYDE  251 (253)
T ss_pred             HHHHhcC--cccccccccccc
Confidence            9985542  899999987654

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.67  E-value=3.2e-16  Score=127.11  Aligned_cols=146  Identities=18%  Similarity=0.074  Sum_probs=107.6

Q ss_pred             HHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEech
Q psy7936          30 TAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA  109 (222)
Q Consensus        30 ~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~a  109 (222)
                      +|+.|++.|++|++++|+.+..+     +                ..++++|+++.++++++++++.   +++|++||||
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~----------------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nA   56 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L----------------DGFIQADLGDPASIDAAVAALP---GRIDALFNIA   56 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h----------------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECC
Confidence            47899999999999999876531     1                1257899999999999988764   6899999999


Q ss_pred             hhHH----------------------------------------hh---------------------------h------
Q psy7936         110 VYCI----------------------------------------LS---------------------------N------  116 (222)
Q Consensus       110 g~~~----------------------------------------l~---------------------------~------  116 (222)
                      |...                                        ..                           .      
T Consensus        57 G~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (241)
T PRK12428         57 GVPGTAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATG  136 (241)
T ss_pred             CCCCCCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccH
Confidence            9743                                        00                           0      


Q ss_pred             -------HHHHHHHHH-hhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcch-hhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 -------NILFYSILF-YAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGA-RTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 -------~~~~~~~la-~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                             +..+++.++ .+++++||+||+|+||+++|+|............ .....|+++  ..+|+|+|+.+.|++ +
T Consensus       137 Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~pe~va~~~~~l~-s  213 (241)
T PRK12428        137 YQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGR--PATADEQAAVLVFLC-S  213 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCC--CCCHHHHHHHHHHHc-C
Confidence                   334678888 8898899999999999999999765432100000 001234444  679999999999996 5


Q ss_pred             CCccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYK  202 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~  202 (222)
                      +...+++|+.+..++
T Consensus       214 ~~~~~~~G~~i~vdg  228 (241)
T PRK12428        214 DAARWINGVNLPVDG  228 (241)
T ss_pred             hhhcCccCcEEEecC
Confidence            556799999885443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.59  E-value=4.3e-14  Score=122.35  Aligned_cols=82  Identities=26%  Similarity=0.284  Sum_probs=65.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++.   +..          ....+..+.+|+++.+++.+
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~----------~~~~v~~v~~Dvsd~~~v~~  241 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---ING----------EDLPVKTLHWQVGQEAALAE  241 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---Hhh----------cCCCeEEEEeeCCCHHHHHH
Confidence            46789999999999999999999999999999999988755432   211          12246678899999887765


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .       .+++|++|||||..
T Consensus       242 ~-------l~~IDiLInnAGi~  256 (406)
T PRK07424        242 L-------LEKVDILIINHGIN  256 (406)
T ss_pred             H-------hCCCCEEEECCCcC
Confidence            3       35799999999875

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.58  E-value=2.5e-14  Score=144.98  Aligned_cols=127  Identities=17%  Similarity=0.102  Sum_probs=96.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCCh--------------hHHHH------------------------
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDV--------------EKAET------------------------   53 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~--------------~~~~~------------------------   53 (222)
                      +++++|||||++|||+++|+.|+++ |++|++++|+.              ..++.                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5889999999999999999999998 68999999982              00110                        


Q ss_pred             ------HHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHHh-------------
Q psy7936          54 ------TASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCIL-------------  114 (222)
Q Consensus        54 ------~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l-------------  114 (222)
                            +.+.+...       ...+.++.++.||++|.++++++++.+.+. ++||+||||||+...             
T Consensus      2076 ~~~~~ei~~~la~l-------~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~ 2147 (2582)
T TIGR02813      2076 VLSSLEIAQALAAF-------KAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNA 2147 (2582)
T ss_pred             cchhHHHHHHHHHH-------HhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHH
Confidence                  00001100       013568899999999999999999999776 689999999998650             


Q ss_pred             ---hh-------------------------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcC
Q psy7936         115 ---SN-------------------------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELG  148 (222)
Q Consensus       115 ---~~-------------------------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~  148 (222)
                         +|                                           +..+++.++.++.  +++|++|+||+++|+|.
T Consensus      2148 v~~~nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813      2148 VYGTKVDGLLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCcc
Confidence               00                                           5566667776663  49999999999999986


Q ss_pred             C
Q psy7936         149 R  149 (222)
Q Consensus       149 ~  149 (222)
                      .
T Consensus      2226 ~ 2226 (2582)
T TIGR02813      2226 N 2226 (2582)
T ss_pred             c
Confidence            4

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.53  E-value=1.6e-13  Score=106.67  Aligned_cols=88  Identities=23%  Similarity=0.253  Sum_probs=68.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh---hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV---EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ++||||+++|||..+++.|+++|. +|++++|+.   ....+..+.++..          +.++.+++||++|++++.++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~----------g~~v~~~~~Dv~d~~~v~~~   71 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA----------GARVEYVQCDVTDPEAVAAA   71 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT----------T-EEEEEE--TTSHHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC----------CCceeeeccCccCHHHHHHH
Confidence            799999999999999999999987 999999993   2345566666663          77999999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++.+.+.+++|+.+||+||...
T Consensus        72 ~~~~~~~~~~i~gVih~ag~~~   93 (181)
T PF08659_consen   72 LAQLRQRFGPIDGVIHAAGVLA   93 (181)
T ss_dssp             HHTSHTTSS-EEEEEE------
T ss_pred             HHHHHhccCCcceeeeeeeeec
Confidence            9999999999999999999876

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.52  E-value=2.2e-13  Score=103.98  Aligned_cols=88  Identities=24%  Similarity=0.227  Sum_probs=72.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHH---HHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTA---SEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      |+++||||++|||.++++.|+++|+ .|++++|+.+..+...   +.++.          .+.++.++.+|+++..++.+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~   70 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA----------LGAEVTVVACDVADRAALAA   70 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh----------cCCeEEEEECCCCCHHHHHH
Confidence            5799999999999999999999997 7888888765443332   23322          25678899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +++.+.+.++++|++|||+|..
T Consensus        71 ~~~~~~~~~~~id~li~~ag~~   92 (180)
T smart00822       71 ALAAIPARLGPLRGVIHAAGVL   92 (180)
T ss_pred             HHHHHHHHcCCeeEEEEccccC
Confidence            9999988889999999999864

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.43  E-value=2.5e-12  Score=108.87  Aligned_cols=155  Identities=18%  Similarity=0.162  Sum_probs=103.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++|+++||||+|+||.+++++|++.|  ++|++++|+.....++.+.+            ...++.++.+|++|.+++.
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~------------~~~~~~~v~~Dl~d~~~l~   69 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF------------PAPCLRFFIGDVRDKERLT   69 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh------------CCCcEEEEEccCCCHHHHH
Confidence            468999999999999999999999986  68999998876544333222            1246788999999999888


Q ss_pred             HHHHHHHhhccceeEEEechhhHH------------hhh----------------------------------------H
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI------------LSN----------------------------------------N  117 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~------------l~~----------------------------------------~  117 (222)
                      ++++       .+|++||+||...            -+|                                        .
T Consensus        70 ~~~~-------~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p~~~Y~~sK~~~  142 (324)
T TIGR03589        70 RALR-------GVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANPINLYGATKLAS  142 (324)
T ss_pred             HHHh-------cCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCHHHHHHHHH
Confidence            7654       4799999998632            001                                        3


Q ss_pred             HHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhH---HHHH----HHhcCChHHHHHHHHHHhcC
Q psy7936         118 ILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLG---RVLM----WWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       118 ~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~p~e~a~~i~~l~~~  187 (222)
                      ..+++.++.+..+.|++++++.||.+..+-..-.+  .+.......   .++.    ...+..++|+++.++.++..
T Consensus       143 E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~--~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~  217 (324)
T TIGR03589       143 DKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVP--FFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER  217 (324)
T ss_pred             HHHHHHHHhhccccCcEEEEEeecceeCCCCCcHH--HHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence            44444445555678999999999998764211000  000000000   0000    00146899999999988644

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1502|consensus

Probab=99.43  E-value=8.7e-13  Score=109.63  Aligned_cols=173  Identities=17%  Similarity=0.133  Sum_probs=120.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHH--HHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAET--TASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+++++||||+|.||..+++.|+++||.|..+.|+++..+.  ....++..          ..++..+..|+.+..++..
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a----------~~~l~l~~aDL~d~~sf~~   74 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA----------KERLKLFKADLLDEGSFDK   74 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC----------cccceEEeccccccchHHH
Confidence            67899999999999999999999999999999999987433  23333321          4468999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh-----------------hh-------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL-----------------SN-------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l-----------------~~-------------------------------------  116 (222)
                      +++.       .|+++|.|.....                 .|                                     
T Consensus        75 ai~g-------cdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvd  147 (327)
T KOG1502|consen   75 AIDG-------CDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVD  147 (327)
T ss_pred             HHhC-------CCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccc
Confidence            8775       5999999966440                 00                                     


Q ss_pred             ---------------HHHHHHHHHh----hcC-CCCeEEEEEeCCcccCCcCCCCCCCCCcchhh------hHHHHHHHh
Q psy7936         117 ---------------NILFYSILFY----AIP-GKNVNVYAVHPGIVKTELGRYMDDTYFPGART------LGRVLMWWW  170 (222)
Q Consensus       117 ---------------~~~~~~~la~----~~~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~------~~~~~~~~~  170 (222)
                                     .+.+.|.+|.    +++ +.|+...+|+||+|--|.............++      ...+-.+..
T Consensus       148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~  227 (327)
T KOG1502|consen  148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLA  227 (327)
T ss_pred             cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCcee
Confidence                           3456666654    344 45799999999999777665522110000000      001111122


Q ss_pred             cCChHHHHHHHHHHhcCCCcccccccccccccccc
Q psy7936         171 MKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       171 ~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      ..+..|+|.+.+++...+..   .|+|+.......
T Consensus       228 ~VdVrDVA~AHv~a~E~~~a---~GRyic~~~~~~  259 (327)
T KOG1502|consen  228 FVDVRDVALAHVLALEKPSA---KGRYICVGEVVS  259 (327)
T ss_pred             eEeHHHHHHHHHHHHcCccc---CceEEEecCccc
Confidence            57899999999999866654   599996554433

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.25  E-value=1e-10  Score=102.87  Aligned_cols=90  Identities=22%  Similarity=0.285  Sum_probs=82.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++||+++||||+|.||.++++++++.+. ++++.+|++.++..+..++...+        +..++.++.+|+.|.+.+.
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~--------~~~~~~~~igdVrD~~~~~  318 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKF--------PELKLRFYIGDVRDRDRVE  318 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhC--------CCcceEEEecccccHHHHH
Confidence            36899999999999999999999999987 89999999999999999998865        5678999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++++..     ++|+++|.|+..+
T Consensus       319 ~~~~~~-----kvd~VfHAAA~KH  337 (588)
T COG1086         319 RAMEGH-----KVDIVFHAAALKH  337 (588)
T ss_pred             HHHhcC-----CCceEEEhhhhcc
Confidence            988765     7999999999887

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.24  E-value=9.3e-11  Score=90.76  Aligned_cols=168  Identities=11%  Similarity=0.041  Sum_probs=108.1

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+ |+|.++++.|++.|++|++++|+.+..+++...+..           ..++.++.+|++|.+++.++++.+
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-----------~~~i~~~~~Dv~d~~sv~~~i~~~   69 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-----------PESITPLPLDYHDDDALKLAIKST   69 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-----------CCcEEEEEccCCCHHHHHHHHHHH
Confidence            68999998 788889999999999999999998877666554432           347888999999999999999999


Q ss_pred             HhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeCCccc-CCcCC--CCCC-CCCcc-hhhhHHHHHHHh
Q psy7936          96 NQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGIVK-TELGR--YMDD-TYFPG-ARTLGRVLMWWW  170 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~PG~v~-T~~~~--~~~~-~~~~~-~~~~~~~~~~~~  170 (222)
                      .+.++++|++|+.+-...-.++....+.....  ....++..+.=.... +.+..  .... ..+.. -+=+...-..-+
T Consensus        70 l~~~g~id~lv~~vh~~~~~~~~~~~~~~gv~--~~~~~~~h~~gs~~~~~~~~~~~~~~~~~~~~~i~lgf~~~~~~~r  147 (177)
T PRK08309         70 IEKNGPFDLAVAWIHSSAKDALSVVCRELDGS--SETYRLFHVLGSAASDPRIPSEKIGPARCSYRRVILGFVLEDTYSR  147 (177)
T ss_pred             HHHcCCCeEEEEeccccchhhHHHHHHHHccC--CCCceEEEEeCCcCCchhhhhhhhhhcCCceEEEEEeEEEeCCccc
Confidence            88889999999887654432233322222111  112346666522221 11111  0000 00000 000000111123


Q ss_pred             cCChHHHHHHHHHHhcCCCcccccccc
Q psy7936         171 MKTPEQGAQTTLHCALDEGAAKETGLY  197 (222)
Q Consensus       171 ~~~p~e~a~~i~~l~~~~~~~~~~G~~  197 (222)
                      |+|-+|+++-++....++...++-|+.
T Consensus       148 wlt~~ei~~gv~~~~~~~~~~~~~g~~  174 (177)
T PRK08309        148 WLTHEEISDGVIKAIESDADEHVVGTV  174 (177)
T ss_pred             cCchHHHHHHHHHHHhcCCCeEEEEEe
Confidence            899999999999998888777787754

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.22  E-value=4.1e-10  Score=91.79  Aligned_cols=155  Identities=20%  Similarity=0.200  Sum_probs=99.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh-hh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF-KS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~   87 (222)
                      ..+..+++++||||+|+||+.++++|++.|++|+++.|+.+.......              .+.++.++++|+.+. .+
T Consensus        12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--------------~~~~~~~~~~Dl~d~~~~   77 (251)
T PLN00141         12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP--------------QDPSLQIVRADVTEGSDK   77 (251)
T ss_pred             cccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc--------------cCCceEEEEeeCCCCHHH
Confidence            345678899999999999999999999999999999999875443211              123577889999873 22


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH--------------hhh--------------------------------HHH--
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI--------------LSN--------------------------------NIL--  119 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~--------------l~~--------------------------------~~~--  119 (222)
                      +.   +.+.   ..+|++|+|+|...              ..+                                ...  
T Consensus        78 l~---~~~~---~~~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~  151 (251)
T PLN00141         78 LV---EAIG---DDSDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFL  151 (251)
T ss_pred             HH---HHhh---cCCCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHH
Confidence            22   2220   26899999987531              000                                000  


Q ss_pred             --H-----HHHHHhh-cCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         120 --F-----YSILFYA-IPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       120 --~-----~~~la~~-~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                        +     .+..+.+ +.+.|++++.|.||++.+++........ ..   . .....  ..+++|+|+.+..++.++..
T Consensus       152 ~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~-~~---~-~~~~~--~i~~~dvA~~~~~~~~~~~~  223 (251)
T PLN00141        152 NLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVME-PE---D-TLYEG--SISRDQVAEVAVEALLCPES  223 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEEC-CC---C-ccccC--cccHHHHHHHHHHHhcChhh
Confidence              1     1112221 4567899999999998766532211000 00   0 00011  57999999999999877653

>PLN02583 cinnamoyl-CoA reductase

Probab=99.18  E-value=3.9e-10  Score=94.30  Aligned_cols=69  Identities=17%  Similarity=0.194  Sum_probs=48.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh--HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE--KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++|+++||||+|+||.+++++|+++|++|+++.|+..  ...+....+..          .+.++.++.+|+++..++..
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~----------~~~~~~~~~~Dl~d~~~~~~   74 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC----------EEERLKVFDVDPLDYHSILD   74 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc----------CCCceEEEEecCCCHHHHHH
Confidence            5789999999999999999999999999999998643  22222222211          12345666777777666554


Q ss_pred             H
Q psy7936          91 C   91 (222)
Q Consensus        91 ~   91 (222)
                      +
T Consensus        75 ~   75 (297)
T PLN02583         75 A   75 (297)
T ss_pred             H
Confidence            3

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.17  E-value=1.4e-10  Score=99.08  Aligned_cols=84  Identities=18%  Similarity=0.155  Sum_probs=68.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +++|++|||||+|+||.++++.|++.|++|++++|+........+.+..           ..++.++.+|+++.+++.++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~   70 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL-----------AKKIEDHFGDIRDAAKLRKA   70 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh-----------cCCceEEEccCCCHHHHHHH
Confidence            4678999999999999999999999999999999987654433333321           23566789999999999988


Q ss_pred             HHHHHhhccceeEEEechhh
Q psy7936          92 AQDINQTEANVHILINNAVY  111 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~  111 (222)
                      ++..     .+|++||+|+.
T Consensus        71 ~~~~-----~~d~vih~A~~   85 (349)
T TIGR02622        71 IAEF-----KPEIVFHLAAQ   85 (349)
T ss_pred             Hhhc-----CCCEEEECCcc
Confidence            7764     58999999985

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.14  E-value=2.3e-10  Score=96.62  Aligned_cols=85  Identities=19%  Similarity=0.135  Sum_probs=66.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++|++|||||+|+||.++++.|++.|++|++++|+.+...+.........        ...++.++.+|+++.+++.+++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~d~~~~~~~~   75 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDG--------AKERLKLFKADLLDEGSFELAI   75 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccC--------CCCceEEEeCCCCCchHHHHHH
Confidence            47899999999999999999999999999999988765544322221110        1246888999999999888776


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +       .+|++|||||..
T Consensus        76 ~-------~~d~vih~A~~~   88 (325)
T PLN02989         76 D-------GCETVFHTASPV   88 (325)
T ss_pred             c-------CCCEEEEeCCCC
Confidence            5       479999999853

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.12  E-value=2.6e-10  Score=94.00  Aligned_cols=84  Identities=21%  Similarity=0.288  Sum_probs=60.9

Q ss_pred             EEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCe----EEEEecCCCChhhHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE----VLIKKLDLASFKSIRDC   91 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~D~~~~~~v~~~   91 (222)
                      +|||||+|.||.+++++|++.+. .++++++++.++-++..++....        ++.+    +..+.+|++|.+.+.++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~--------~~~~v~~~~~~vigDvrd~~~l~~~   72 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRF--------PDPKVRFEIVPVIGDVRDKERLNRI   72 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC----------TTCEEEEE--CTSCCHHHHHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcc--------cccCcccccCceeecccCHHHHHHH
Confidence            68999999999999999999986 89999999999999999986543        2222    34568899999999988


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++..     ++|+++|.|+...
T Consensus        73 ~~~~-----~pdiVfHaAA~Kh   89 (293)
T PF02719_consen   73 FEEY-----KPDIVFHAAALKH   89 (293)
T ss_dssp             TT-------T-SEEEE------
T ss_pred             Hhhc-----CCCEEEEChhcCC
Confidence            7654     8999999999888

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.11  E-value=2.6e-10  Score=96.95  Aligned_cols=91  Identities=20%  Similarity=0.139  Sum_probs=68.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH-HHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE-TTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+..... ...+.+....      ...+.++.++.+|+++.+++.
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~   76 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDP------HPNKARMKLHYGDLSDASSLR   76 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhcccc------ccccCceEEEEecCCCHHHHH
Confidence            467899999999999999999999999999999998754211 1111111100      001346889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++++.+     .+|++||+|+..
T Consensus        77 ~~~~~~-----~~d~Vih~A~~~   94 (340)
T PLN02653         77 RWLDDI-----KPDEVYNLAAQS   94 (340)
T ss_pred             HHHHHc-----CCCEEEECCccc
Confidence            888765     589999999874

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.08  E-value=4.5e-10  Score=95.63  Aligned_cols=84  Identities=20%  Similarity=0.167  Sum_probs=64.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-----HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-----AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |++|||||+|+||.++++.|++.|++|++++|+.+.     +..+.+.+...         .+..+.++++|++|.+++.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~l~   71 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNV---------NKARMKLHYGDLTDSSNLR   71 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccc---------cccceeEEEeccCCHHHHH
Confidence            589999999999999999999999999999987642     22111111000         1346789999999999998


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++++.+     ++|++||+|+..
T Consensus        72 ~~~~~~-----~~d~ViH~Aa~~   89 (343)
T TIGR01472        72 RIIDEI-----KPTEIYNLAAQS   89 (343)
T ss_pred             HHHHhC-----CCCEEEECCccc
Confidence            888765     589999999864

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.06  E-value=1.1e-09  Score=92.40  Aligned_cols=86  Identities=20%  Similarity=0.154  Sum_probs=66.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      -+||+++||||+|+||..++++|++.|++|+++.|+....+.+.+......        ...++.++.+|+++.+++.++
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~   74 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDG--------AKERLKLFKADLLEESSFEQA   74 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccC--------CCCceEEEecCCCCcchHHHH
Confidence            357899999999999999999999999999999998765444332221110        124678899999999988877


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++       .+|++||+|+..
T Consensus        75 ~~-------~~d~vih~A~~~   88 (322)
T PLN02986         75 IE-------GCDAVFHTASPV   88 (322)
T ss_pred             Hh-------CCCEEEEeCCCc
Confidence            65       369999999853

>PLN02240 UDP-glucose 4-epimerase

Probab=99.01  E-value=2.5e-09  Score=91.14  Aligned_cols=90  Identities=20%  Similarity=0.228  Sum_probs=66.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |.+|+++||||+|+||.+++++|++.|++|++++|......+..+.+.....      ....++.++.+|+++..++.++
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~~l~~~   76 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAG------DLGDNLVFHKVDLRDKEALEKV   76 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhc------ccCccceEEecCcCCHHHHHHH
Confidence            5678999999999999999999999999999998754322222222222110      0123578899999999999887


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++..     .+|++||+|+..
T Consensus        77 ~~~~-----~~d~vih~a~~~   92 (352)
T PLN02240         77 FAST-----RFDAVIHFAGLK   92 (352)
T ss_pred             HHhC-----CCCEEEEccccC
Confidence            7653     689999999864

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.00  E-value=2.1e-09  Score=91.86  Aligned_cols=83  Identities=19%  Similarity=0.147  Sum_probs=67.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ..++++|||||+|.||..++++|+++|++|++++|+.+..+.+...+.           .+.++.++.+|+++.+.+.++
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~~~~Dl~~~~~~~~~   76 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK-----------EGDRLRLFRADLQEEGSFDEA   76 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc-----------cCCeEEEEECCCCCHHHHHHH
Confidence            357799999999999999999999999999999998766555443332           134688899999999888776


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++       .+|++||+|+..
T Consensus        77 ~~-------~~d~Vih~A~~~   90 (353)
T PLN02896         77 VK-------GCDGVFHVAASM   90 (353)
T ss_pred             Hc-------CCCEEEECCccc
Confidence            54       369999999864

>PLN02214 cinnamoyl-CoA reductase

Probab=99.00  E-value=6.4e-09  Score=88.71  Aligned_cols=84  Identities=20%  Similarity=0.275  Sum_probs=65.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH-HHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT-ASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +++|+++||||+|.||..++++|+++|++|++++|+.+..... ...+..          ...++.++.+|+++..++.+
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~d~~~~~~   77 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG----------GKERLILCKADLQDYEALKA   77 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC----------CCCcEEEEecCcCChHHHHH
Confidence            4678999999999999999999999999999999987643221 112211          12367889999999988887


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +++       .+|++||+|+..
T Consensus        78 ~~~-------~~d~Vih~A~~~   92 (342)
T PLN02214         78 AID-------GCDGVFHTASPV   92 (342)
T ss_pred             HHh-------cCCEEEEecCCC
Confidence            765       479999999864

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.99  E-value=3.2e-09  Score=93.60  Aligned_cols=88  Identities=15%  Similarity=0.145  Sum_probs=65.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh---H----HH---------HHHHHHHHhhhhhcccCCCCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE---K----AE---------TTASEIRKHFEVATSEDKKPG   73 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~---~----~~---------~~~~~i~~~~~~~~~~~~~~~   73 (222)
                      ..++++++|||||+|+||..+++.|++.|++|+++++...   .    .+         +-.+.+...         .+.
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~  113 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV---------SGK  113 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh---------hCC
Confidence            4567899999999999999999999999999999874211   0    00         001111111         133


Q ss_pred             eEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhh
Q psy7936          74 EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        74 ~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      ++.++.+|++|.+.+.++++..     ++|++||+|+.
T Consensus       114 ~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~  146 (442)
T PLN02572        114 EIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQ  146 (442)
T ss_pred             cceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCc
Confidence            6789999999999999888764     68999999954

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.97  E-value=4.4e-09  Score=89.35  Aligned_cols=85  Identities=20%  Similarity=0.183  Sum_probs=64.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++.+++++||||+|.||..+++.|++.|++|+++.|+......... +....        ...++.++.+|+++.+++.+
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~--------~~~~~~~~~~Dl~d~~~~~~   76 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQ--------ELGDLKIFGADLTDEESFEA   76 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcC--------CCCceEEEEcCCCChHHHHH
Confidence            4568899999999999999999999999999988887654332221 11110        11257889999999988877


Q ss_pred             HHHHHHhhccceeEEEechhh
Q psy7936          91 CAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~  111 (222)
                      +++       .+|++||+|+.
T Consensus        77 ~~~-------~~d~vih~A~~   90 (338)
T PLN00198         77 PIA-------GCDLVFHVATP   90 (338)
T ss_pred             HHh-------cCCEEEEeCCC
Confidence            654       46999999984

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.95  E-value=3.2e-09  Score=89.36  Aligned_cols=84  Identities=19%  Similarity=0.160  Sum_probs=63.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+|+++||||+|.||..++++|+++|++|++++|+......... +....       ....++.++.+|+.+...+..++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~   74 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEH-LLALD-------GAKERLHLFKANLLEEGSFDSVV   74 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHH-HHhcc-------CCCCceEEEeccccCcchHHHHH
Confidence            36899999999999999999999999999999998654332221 21110       01236788999999998887765


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      +       .+|++||+|+.
T Consensus        75 ~-------~~d~Vih~A~~   86 (322)
T PLN02662         75 D-------GCEGVFHTASP   86 (322)
T ss_pred             c-------CCCEEEEeCCc
Confidence            5       46999999975

>PLN02650 dihydroflavonol-4-reductase

Probab=98.91  E-value=6.1e-09  Score=88.97  Aligned_cols=85  Identities=21%  Similarity=0.143  Sum_probs=65.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +.|++|||||+|.||..++++|++.|++|++++|+.+....+...+....        ...++.++.+|+++...+.+++
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~v~~Dl~d~~~~~~~~   75 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPG--------ATTRLTLWKADLAVEGSFDDAI   75 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccC--------CCCceEEEEecCCChhhHHHHH
Confidence            46799999999999999999999999999999998766554433221100        1236788999999998888776


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +       .+|++||+|+..
T Consensus        76 ~-------~~d~ViH~A~~~   88 (351)
T PLN02650         76 R-------GCTGVFHVATPM   88 (351)
T ss_pred             h-------CCCEEEEeCCCC
Confidence            5       369999999753

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=98.88  E-value=1e-08  Score=89.06  Aligned_cols=87  Identities=17%  Similarity=0.193  Sum_probs=67.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHH--HHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAET--TASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++++||||+|+||..+++.|+++|++|++++|+......  ..+.+...          ...+.++++|++|.+++.
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~----------~~~v~~v~~Dl~d~~~l~  127 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE----------LPGAEVVFGDVTDADSLR  127 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh----------cCCceEEEeeCCCHHHHH
Confidence            467899999999999999999999999999999998764321  11111111          235788999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhh
Q psy7936          90 DCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~  111 (222)
                      ++++.+   ..++|++|||++.
T Consensus       128 ~~~~~~---~~~~D~Vi~~aa~  146 (390)
T PLN02657        128 KVLFSE---GDPVDVVVSCLAS  146 (390)
T ss_pred             HHHHHh---CCCCcEEEECCcc
Confidence            887754   1268999999874

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.86  E-value=1.2e-08  Score=86.43  Aligned_cols=83  Identities=17%  Similarity=0.149  Sum_probs=62.6

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+|+||..+++.|++.|++|++++|...........+...         .+.++.++.+|+++.+++..+++. 
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~~~-   71 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL---------GGKHPTFVEGDIRNEALLTEILHD-   71 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh---------cCCCceEEEccCCCHHHHHHHHhc-
Confidence            5899999999999999999999999999886543332222223221         233567889999999988887653 


Q ss_pred             HhhccceeEEEechhhH
Q psy7936          96 NQTEANVHILINNAVYC  112 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~  112 (222)
                          ..+|++||+|+..
T Consensus        72 ----~~~d~vvh~a~~~   84 (338)
T PRK10675         72 ----HAIDTVIHFAGLK   84 (338)
T ss_pred             ----CCCCEEEECCccc
Confidence                3689999999754

>PLN02686 cinnamoyl-CoA reductase

Probab=98.86  E-value=2.7e-08  Score=85.73  Aligned_cols=81  Identities=17%  Similarity=0.199  Sum_probs=59.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|++|||||+|+||..+++.|+++|++|+++.|+.+..+.+. .+....+.    ...+..+.++.+|+++.+++.
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~----~~~~~~~~~v~~Dl~d~~~l~  123 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEM----GRSNDGIWTVMANLTEPESLH  123 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccc----cccCCceEEEEcCCCCHHHHH
Confidence            4567899999999999999999999999999999899876655442 22211000    000135788999999999998


Q ss_pred             HHHHHH
Q psy7936          90 DCAQDI   95 (222)
Q Consensus        90 ~~~~~i   95 (222)
                      ++++.+
T Consensus       124 ~~i~~~  129 (367)
T PLN02686        124 EAFDGC  129 (367)
T ss_pred             HHHHhc
Confidence            887654

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.83  E-value=1e-08  Score=87.61  Aligned_cols=84  Identities=10%  Similarity=0.107  Sum_probs=59.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEE-EEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKV-IMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v-~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      |++|||||+|+||.++++.|.++|+++ ++.+|.... .... .+....        +..++.++.+|++|.+++.++++
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~-~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~   71 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLM-SLAPVA--------QSERFAFEKVDICDRAELARVFT   71 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchh-hhhhcc--------cCCceEEEECCCcChHHHHHHHh
Confidence            579999999999999999999999864 455554321 1111 111110        12367788999999999988876


Q ss_pred             HHHhhccceeEEEechhhHH
Q psy7936          94 DINQTEANVHILINNAVYCI  113 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~  113 (222)
                      ..     .+|++||+||...
T Consensus        72 ~~-----~~D~Vih~A~~~~   86 (355)
T PRK10217         72 EH-----QPDCVMHLAAESH   86 (355)
T ss_pred             hc-----CCCEEEECCcccC
Confidence            52     5899999998643

>PLN02427 UDP-apiose/xylose synthase

Probab=98.80  E-value=2.2e-08  Score=86.62  Aligned_cols=86  Identities=14%  Similarity=0.113  Sum_probs=64.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .+.+.++++||||+|.||..+++.|+++ |++|++++|+.+....+.......         ...++.++.+|+.|...+
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~---------~~~~~~~~~~Dl~d~~~l   80 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVP---------WSGRIQFHRINIKHDSRL   80 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccccc---------CCCCeEEEEcCCCChHHH
Confidence            4456678999999999999999999998 589999998866543322110000         123688999999999888


Q ss_pred             HHHHHHHHhhccceeEEEechhh
Q psy7936          89 RDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      .++++       .+|++||+|+.
T Consensus        81 ~~~~~-------~~d~ViHlAa~   96 (386)
T PLN02427         81 EGLIK-------MADLTINLAAI   96 (386)
T ss_pred             HHHhh-------cCCEEEEcccc
Confidence            77654       26999999985

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.78  E-value=3.5e-08  Score=82.27  Aligned_cols=120  Identities=19%  Similarity=0.194  Sum_probs=78.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh---hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV---EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      ..+++|+++|+|| ||+|++++..|++.|+ +|++++|+.   ++.+++.+.+...          ...+.+..+|+++.
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~----------~~~~~~~~~d~~~~  190 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE----------VPECIVNVYDLNDT  190 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc----------CCCceeEEechhhh
Confidence            3567899999999 6999999999999999 599999997   6777777776442          23455667888877


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH--hhhHHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCC
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI--LSNNILFYSILFYAIPGKNVNVYAVHPGIVKTELGRY  150 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~--l~~~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~  150 (222)
                      +++...++       ..|++|||..+.-  ..+...+..  ...+. .+..|..+.=.+.+|++.+.
T Consensus       191 ~~~~~~~~-------~~DilINaTp~Gm~~~~~~~~~~~--~~~l~-~~~~v~D~vY~P~~T~ll~~  247 (289)
T PRK12548        191 EKLKAEIA-------SSDILVNATLVGMKPNDGETNIKD--TSVFR-KDLVVADTVYNPKKTKLLED  247 (289)
T ss_pred             hHHHhhhc-------cCCEEEEeCCCCCCCCCCCCCCCc--HHhcC-CCCEEEEecCCCCCCHHHHH
Confidence            66655433       3499999874321  111000000  01123 23456666555567777654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.77  E-value=2.1e-08  Score=86.87  Aligned_cols=80  Identities=25%  Similarity=0.336  Sum_probs=62.5

Q ss_pred             CCCCCCEEEEecC---------------CCc-hHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCC
Q psy7936          10 SRLDGKTVIITGC---------------NTG-IGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG   73 (222)
Q Consensus        10 ~~~~~k~~lVtGa---------------s~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~   73 (222)
                      .+|.||++|||||               ++| +|.++|+.|+++|++|++++++.+ +.        .         +. 
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--------~---------~~-  244 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--------T---------PA-  244 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--------C---------CC-
Confidence            4578999999999               455 999999999999999999998752 11        0         11 


Q ss_pred             eEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          74 EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        74 ~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .  +..+|+++.+++.+.+.   +.++++|++|||||+..
T Consensus       245 ~--~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        245 G--VKRIDVESAQEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             C--cEEEccCCHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence            1  34679998888877665   45678999999999765

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=98.75  E-value=7.6e-08  Score=80.41  Aligned_cols=82  Identities=12%  Similarity=0.073  Sum_probs=60.2

Q ss_pred             EEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhH-HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEK-AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +++||||+|+||.+++++|++.|  ++|++.+|.... -.+..+.+.           ...++.++.+|+++.+++.+++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Dl~~~~~~~~~~   69 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE-----------DNPRYRFVKGDIGDRELVSRLF   69 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc-----------cCCCcEEEEcCCcCHHHHHHHH
Confidence            48999999999999999999987  688888764211 111111111           1235778899999999998887


Q ss_pred             HHHHhhccceeEEEechhhHH
Q psy7936          93 QDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~  113 (222)
                      +..     ++|++||+|+...
T Consensus        70 ~~~-----~~d~vi~~a~~~~   85 (317)
T TIGR01181        70 TEH-----QPDAVVHFAAESH   85 (317)
T ss_pred             hhc-----CCCEEEEcccccC
Confidence            653     5899999998643

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.74  E-value=3.2e-07  Score=78.03  Aligned_cols=90  Identities=20%  Similarity=0.237  Sum_probs=57.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhH---HHHHHHHHHHhhhhhcccCCCC-CeEEEEecCCCChhh--
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEK---AETTASEIRKHFEVATSEDKKP-GEVLIKKLDLASFKS--   87 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~---~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~--   87 (222)
                      +++||||||+||..++++|+++|  ++|+++.|+...   .+.+.+.+....-   ...... .++.++.+|++++.-  
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~v~~~~~D~~~~~~gl   77 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRL---WQEDLARERIEVVAGDLSEPRLGL   77 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCC---CCchhhhCCEEEEeCCcCcccCCc
Confidence            48999999999999999999998  689999997653   2233333322100   000001 478899999986531  


Q ss_pred             -HHHHHHHHHhhccceeEEEechhhH
Q psy7936          88 -IRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        88 -v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                       -..+ ..+   ...+|++||||+..
T Consensus        78 ~~~~~-~~~---~~~~d~vih~a~~~   99 (367)
T TIGR01746        78 SDAEW-ERL---AENVDTIVHNGALV   99 (367)
T ss_pred             CHHHH-HHH---HhhCCEEEeCCcEe
Confidence             1111 111   13689999999853

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.71  E-value=6.1e-08  Score=82.84  Aligned_cols=90  Identities=18%  Similarity=0.198  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..|.+|+++||||+|-||..++++|.++|++|++++|...........+.....     .....++.++.+|+.+.+.+.
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Di~d~~~l~   85 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVS-----EEQWSRFIFIQGDIRKFTDCQ   85 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccc-----cccCCceEEEEccCCCHHHHH
Confidence            456778999999999999999999999999999999865432222222111000     001236788999999988777


Q ss_pred             HHHHHHHhhccceeEEEechhh
Q psy7936          90 DCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~  111 (222)
                      .+++       .+|++||.|+.
T Consensus        86 ~~~~-------~~d~ViHlAa~  100 (348)
T PRK15181         86 KACK-------NVDYVLHQAAL  100 (348)
T ss_pred             HHhh-------CCCEEEECccc
Confidence            6654       37999999975

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.71  E-value=5.9e-08  Score=81.37  Aligned_cols=81  Identities=16%  Similarity=0.153  Sum_probs=61.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+|+||..+++.|.++|++|++++|......+....+..           ..++.++.+|+++.+++.++++. 
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~-   68 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER-----------ITRVTFVEGDLRDRELLDRLFEE-   68 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc-----------ccceEEEECCCCCHHHHHHHHHh-
Confidence            478999999999999999999999998887644322222222211           11577889999999999887763 


Q ss_pred             HhhccceeEEEechhhH
Q psy7936          96 NQTEANVHILINNAVYC  112 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~  112 (222)
                          .++|++|||||..
T Consensus        69 ----~~~d~vv~~ag~~   81 (328)
T TIGR01179        69 ----HKIDAVIHFAGLI   81 (328)
T ss_pred             ----CCCcEEEECcccc
Confidence                4799999999864

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.70  E-value=8.4e-08  Score=78.70  Aligned_cols=98  Identities=17%  Similarity=0.156  Sum_probs=74.1

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      ++|||||+|.||..++.+|++.|++|++++.-.....+....+               ...+++.|+.|.+-+.+++++.
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~---------------~~~f~~gDi~D~~~L~~vf~~~   66 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL---------------QFKFYEGDLLDRALLTAVFEEN   66 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc---------------cCceEEeccccHHHHHHHHHhc
Confidence            6999999999999999999999999999997654433333221               1458999999999999988875


Q ss_pred             HhhccceeEEEechhhHH-----------hhhHHHHHHHHHhhcCCCCe
Q psy7936          96 NQTEANVHILINNAVYCI-----------LSNNILFYSILFYAIPGKNV  133 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~-----------l~~~~~~~~~la~~~~~~gI  133 (222)
                           ++|.+||.||...           ..|+..-+..|-..+.+.||
T Consensus        67 -----~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv  110 (329)
T COG1087          67 -----KIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGV  110 (329)
T ss_pred             -----CCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCC
Confidence                 8999999999876           22344445555555444444

>KOG1371|consensus

Probab=98.70  E-value=9.8e-08  Score=78.99  Aligned_cols=88  Identities=18%  Similarity=0.228  Sum_probs=69.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      ++.+|||||+|.||..++.+|.+.|+.|+++|.=.....+....++...       ..+..+.+++.|+.|.+.++++++
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~-------~~~~~v~f~~~Dl~D~~~L~kvF~   74 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLL-------GEGKSVFFVEGDLNDAEALEKLFS   74 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhc-------CCCCceEEEEeccCCHHHHHHHHh
Confidence            5789999999999999999999999999999853322222233333321       024689999999999999999988


Q ss_pred             HHHhhccceeEEEechhhHH
Q psy7936          94 DINQTEANVHILINNAVYCI  113 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~  113 (222)
                      ..     ++|.++|-|+...
T Consensus        75 ~~-----~fd~V~Hfa~~~~   89 (343)
T KOG1371|consen   75 EV-----KFDAVMHFAALAA   89 (343)
T ss_pred             hc-----CCceEEeehhhhc
Confidence            76     6999999998777

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.67  E-value=2.1e-07  Score=73.08  Aligned_cols=85  Identities=21%  Similarity=0.343  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++++++|+|++|++|+.+++.|++.|++|++++|+.++++++.+.+....         +.  ....+|..+.+++.
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---------~~--~~~~~~~~~~~~~~   92 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---------GE--GVGAVETSDDAARA   92 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---------CC--cEEEeeCCCHHHHH
Confidence            36788999999999999999999999999999999999999888887775431         22  24456888877776


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++       ..|++|++....
T Consensus        93 ~~~~-------~~diVi~at~~g  108 (194)
T cd01078          93 AAIK-------GADVVFAAGAAG  108 (194)
T ss_pred             HHHh-------cCCEEEECCCCC
Confidence            6554       358888876543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.66  E-value=1.2e-07  Score=73.25  Aligned_cols=70  Identities=24%  Similarity=0.273  Sum_probs=60.6

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDIN   96 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~   96 (222)
                      ++|+||||.+|..++++|.+.|++|+++.|++++.++                  ..++.++++|+.+.+++.+.++   
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------------------~~~~~~~~~d~~d~~~~~~al~---   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------------------SPGVEIIQGDLFDPDSVKAALK---   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------------------CTTEEEEESCTTCHHHHHHHHT---
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------------------ccccccceeeehhhhhhhhhhh---
Confidence            6899999999999999999999999999999987665                  1267889999999988877655   


Q ss_pred             hhccceeEEEechhh
Q psy7936          97 QTEANVHILINNAVY  111 (222)
Q Consensus        97 ~~~~~id~li~~ag~  111 (222)
                          ..|++|+++|.
T Consensus        60 ----~~d~vi~~~~~   70 (183)
T PF13460_consen   60 ----GADAVIHAAGP   70 (183)
T ss_dssp             ----TSSEEEECCHS
T ss_pred             ----hcchhhhhhhh
Confidence                46999999984

...

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.65  E-value=5.7e-08  Score=81.71  Aligned_cols=74  Identities=22%  Similarity=0.243  Sum_probs=60.0

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+|+||..+++.|++.|++|++++|+.+....+                ....+.++.+|+++.+++.++++  
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------------~~~~~~~~~~D~~~~~~l~~~~~--   63 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----------------EGLDVEIVEGDLRDPASLRKAVA--   63 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----------------ccCCceEEEeeCCCHHHHHHHHh--
Confidence            689999999999999999999999999999987643211                12257789999999988877664  


Q ss_pred             HhhccceeEEEechhhH
Q psy7936          96 NQTEANVHILINNAVYC  112 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~  112 (222)
                           .+|++||+|+..
T Consensus        64 -----~~d~vi~~a~~~   75 (328)
T TIGR03466        64 -----GCRALFHVAADY   75 (328)
T ss_pred             -----CCCEEEEeceec
Confidence                 469999998753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.60  E-value=6.7e-08  Score=77.77  Aligned_cols=77  Identities=17%  Similarity=0.289  Sum_probs=60.8

Q ss_pred             CEEEEecC-CCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGC-NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGa-s~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      .+=.||.. +||||+++|+.|++.|++|+++++...        +..          ..    ...+|+++.+++.++++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~----------~~----~~~~Dv~d~~s~~~l~~   72 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP----------EP----HPNLSIREIETTKDLLI   72 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc----------cc----CCcceeecHHHHHHHHH
Confidence            35556766 578999999999999999999876311        100          01    24589999999999999


Q ss_pred             HHHhhccceeEEEechhhHH
Q psy7936          94 DINQTEANVHILINNAVYCI  113 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~  113 (222)
                      .+.+.++++|++|||||+..
T Consensus        73 ~v~~~~g~iDiLVnnAgv~d   92 (227)
T TIGR02114        73 TLKELVQEHDILIHSMAVSD   92 (227)
T ss_pred             HHHHHcCCCCEEEECCEecc
Confidence            99999999999999999765

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.60  E-value=1.6e-07  Score=80.05  Aligned_cols=80  Identities=11%  Similarity=0.157  Sum_probs=59.0

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCE-EEEEeCCh--hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAK-VIMACRDV--EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~-v~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +++||||+|+||..++++|++.|.+ |+++++..  ...+.+. .+.           ++.++.++.+|++|.+++.+++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~Dl~d~~~~~~~~   69 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-----------DSERYVFEHADICDRAELDRIF   69 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-----------cCCceEEEEecCCCHHHHHHHH
Confidence            5899999999999999999999975 55555532  1121111 110           1345778899999999998887


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +..     .+|++||+||..
T Consensus        70 ~~~-----~~d~vih~A~~~   84 (352)
T PRK10084         70 AQH-----QPDAVMHLAAES   84 (352)
T ss_pred             Hhc-----CCCEEEECCccc
Confidence            652     689999999864

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.59  E-value=2e-07  Score=77.67  Aligned_cols=93  Identities=23%  Similarity=0.287  Sum_probs=70.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      ++||||++|-||.++.+.|.+.|+.|+.++|+                               .+|+.|.+.+.++++..
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-------------------------------~~dl~d~~~~~~~~~~~   50 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-------------------------------DLDLTDPEAVAKLLEAF   50 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-------------------------------CS-TTSHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-------------------------------hcCCCCHHHHHHHHHHh
Confidence            58999999999999999999999999888766                               35999999999988776


Q ss_pred             HhhccceeEEEechhhHHhhh-----------HHHHHHHHHhhcCCCCeEEEEEeCCccc
Q psy7936          96 NQTEANVHILINNAVYCILSN-----------NILFYSILFYAIPGKNVNVYAVHPGIVK  144 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l~~-----------~~~~~~~la~~~~~~gI~v~~v~PG~v~  144 (222)
                           ++|++||+||+.....           +...++.|+....+.|+++..++-..|-
T Consensus        51 -----~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VF  105 (286)
T PF04321_consen   51 -----KPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVF  105 (286)
T ss_dssp             -------SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS
T ss_pred             -----CCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEE
Confidence                 6899999999765221           5577788888888889999999888763

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.59  E-value=1.9e-07  Score=78.78  Aligned_cols=73  Identities=15%  Similarity=0.193  Sum_probs=58.1

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||||.||..++++|.++|++|++++|+.+....+.                ...+.++.+|+.|.+++.++++  
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----------------~~~v~~v~~Dl~d~~~l~~al~--   63 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----------------EWGAELVYGDLSLPETLPPSFK--   63 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----------------hcCCEEEECCCCCHHHHHHHHC--
Confidence            6999999999999999999999999999999875432211                1246788999999888876654  


Q ss_pred             HhhccceeEEEechhh
Q psy7936          96 NQTEANVHILINNAVY  111 (222)
Q Consensus        96 ~~~~~~id~li~~ag~  111 (222)
                           .+|++||+++.
T Consensus        64 -----g~d~Vi~~~~~   74 (317)
T CHL00194         64 -----GVTAIIDASTS   74 (317)
T ss_pred             -----CCCEEEECCCC
Confidence                 36899998764

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.58  E-value=2e-07  Score=78.09  Aligned_cols=93  Identities=13%  Similarity=0.101  Sum_probs=68.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      ++|||||+|-||..+++.|.+.| +|+.++|...                           .+..|++|.+.+.++++..
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~---------------------------~~~~Dl~d~~~~~~~~~~~   53 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST---------------------------DYCGDFSNPEGVAETVRKI   53 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc---------------------------cccCCCCCHHHHHHHHHhc
Confidence            59999999999999999999999 7888876421                           2346999999988877653


Q ss_pred             HhhccceeEEEechhhHHhh-----------hHHHHHHHHHhhcCCCCeEEEEEeCC
Q psy7936          96 NQTEANVHILINNAVYCILS-----------NNILFYSILFYAIPGKNVNVYAVHPG  141 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l~-----------~~~~~~~~la~~~~~~gI~v~~v~PG  141 (222)
                           ++|++||+|+.....           .+...+..++....+.|+++..++-.
T Consensus        54 -----~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~  105 (299)
T PRK09987         54 -----RPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTD  105 (299)
T ss_pred             -----CCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccc
Confidence                 579999999875411           13344555666555566777665543

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.58  E-value=6.6e-07  Score=76.29  Aligned_cols=76  Identities=13%  Similarity=0.119  Sum_probs=56.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCC-ChhhHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLA-SFKSIRDCA   92 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~   92 (222)
                      ++++||||+|.||..++++|.+. |++|++++|+.+....+.               +...+.++.+|+. +.+.+.+++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~---------------~~~~~~~~~~Dl~~~~~~~~~~~   66 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV---------------NHPRMHFFEGDITINKEWIEYHV   66 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc---------------cCCCeEEEeCCCCCCHHHHHHHH
Confidence            46999999999999999999986 689999998765332211               1235788899998 555554433


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +       .+|++||+|+..
T Consensus        67 ~-------~~d~ViH~aa~~   79 (347)
T PRK11908         67 K-------KCDVILPLVAIA   79 (347)
T ss_pred             c-------CCCEEEECcccC
Confidence            2       479999998753

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.56  E-value=4e-07  Score=72.87  Aligned_cols=76  Identities=21%  Similarity=0.296  Sum_probs=62.9

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDIN   96 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~   96 (222)
                      ++||||+|-||.+++++|.++|+.|+.+.|+..........               .++.++.+|+.+.+.+.++++.. 
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~---------------~~~~~~~~dl~~~~~~~~~~~~~-   64 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK---------------LNVEFVIGDLTDKEQLEKLLEKA-   64 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH---------------TTEEEEESETTSHHHHHHHHHHH-
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc---------------ceEEEEEeecccccccccccccc-
Confidence            68999999999999999999999988888776543222211               16779999999999999988876 


Q ss_pred             hhccceeEEEechhhH
Q psy7936          97 QTEANVHILINNAVYC  112 (222)
Q Consensus        97 ~~~~~id~li~~ag~~  112 (222)
                          .+|.+||+|+..
T Consensus        65 ----~~d~vi~~a~~~   76 (236)
T PF01370_consen   65 ----NIDVVIHLAAFS   76 (236)
T ss_dssp             ----TESEEEEEBSSS
T ss_pred             ----CceEEEEeeccc
Confidence                899999999974

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.50  E-value=6.9e-07  Score=73.90  Aligned_cols=61  Identities=26%  Similarity=0.414  Sum_probs=52.4

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+|.||..+++.|.+.|++|++++|+                               .+|+.+.++++++++..
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------------------------~~d~~~~~~~~~~~~~~   49 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-------------------------------QLDLTDPEALERLLRAI   49 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------------------------ccCCCCHHHHHHHHHhC
Confidence            37999999999999999999999999998874                               25888888888877653


Q ss_pred             HhhccceeEEEechhhH
Q psy7936          96 NQTEANVHILINNAVYC  112 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~  112 (222)
                           .+|++||+|+..
T Consensus        50 -----~~d~vi~~a~~~   61 (287)
T TIGR01214        50 -----RPDAVVNTAAYT   61 (287)
T ss_pred             -----CCCEEEECCccc
Confidence                 689999999864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.48  E-value=4.3e-07  Score=78.50  Aligned_cols=81  Identities=23%  Similarity=0.423  Sum_probs=61.8

Q ss_pred             CCCCCCEEEEecC---------------CCc-hHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCC
Q psy7936          10 SRLDGKTVIITGC---------------NTG-IGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG   73 (222)
Q Consensus        10 ~~~~~k~~lVtGa---------------s~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~   73 (222)
                      .+++||+++||||               |+| +|.++|+.|+.+|++|++++++....         .         +. 
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~---------~~-  241 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------T---------PP-  241 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------C---------CC-
Confidence            3588999999999               667 99999999999999999988665321         0         11 


Q ss_pred             eEEEEecCCCChhhH-HHHHHHHHhhccceeEEEechhhHHh
Q psy7936          74 EVLIKKLDLASFKSI-RDCAQDINQTEANVHILINNAVYCIL  114 (222)
Q Consensus        74 ~~~~~~~D~~~~~~v-~~~~~~i~~~~~~id~li~~ag~~~l  114 (222)
                      .  ...+|+++.+++ ..+.+++   ++++|++|+|||+...
T Consensus       242 ~--~~~~~v~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       242 G--VKSIKVSTAEEMLEAALNEL---AKDFDIFISAAAVADF  278 (390)
T ss_pred             C--cEEEEeccHHHHHHHHHHhh---cccCCEEEEccccccc
Confidence            1  245799998888 5555343   4679999999998763

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.45  E-value=1.3e-06  Score=80.85  Aligned_cols=79  Identities=13%  Similarity=0.058  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh-HHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS-IRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~   90 (222)
                      .+++++||||+|.||..++++|.++ |++|++++|+........               ...++.++.+|+++... +++
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~---------------~~~~~~~~~gDl~d~~~~l~~  378 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL---------------GHPRFHFVEGDISIHSEWIEY  378 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc---------------CCCceEEEeccccCcHHHHHH
Confidence            5678999999999999999999986 799999999765332211               12357788999998655 333


Q ss_pred             HHHHHHhhccceeEEEechhhHH
Q psy7936          91 CAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +++       .+|++||+|+...
T Consensus       379 ~l~-------~~D~ViHlAa~~~  394 (660)
T PRK08125        379 HIK-------KCDVVLPLVAIAT  394 (660)
T ss_pred             Hhc-------CCCEEEECccccC
Confidence            322       5799999998543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.45  E-value=1.3e-06  Score=75.31  Aligned_cols=77  Identities=17%  Similarity=0.112  Sum_probs=58.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+++++||||+|.||.++++.|.++|++|++++|.....      +..          ......++.+|+.+...+..++
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~----------~~~~~~~~~~Dl~d~~~~~~~~   83 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSE----------DMFCHEFHLVDLRVMENCLKVT   83 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------ccc----------ccccceEEECCCCCHHHHHHHH
Confidence            568899999999999999999999999999999864311      000          0112457789999987766654


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      .       .+|++||+|+..
T Consensus        84 ~-------~~D~Vih~Aa~~   96 (370)
T PLN02695         84 K-------GVDHVFNLAADM   96 (370)
T ss_pred             h-------CCCEEEEccccc
Confidence            3       469999999753

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.42  E-value=8.7e-07  Score=74.19  Aligned_cols=76  Identities=17%  Similarity=0.296  Sum_probs=50.8

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDIN   96 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~   96 (222)
                      ++||||+|.||..++++|.+.|++++++.|+........ .                   +.++|+.|..+...+++.+.
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~-~-------------------~~~~~~~d~~~~~~~~~~~~   61 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-N-------------------LVDLDIADYMDKEDFLAQIM   61 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH-h-------------------hhhhhhhhhhhHHHHHHHHh
Confidence            799999999999999999999996666555543211100 0                   12356666655555555443


Q ss_pred             h--hccceeEEEechhhH
Q psy7936          97 Q--TEANVHILINNAVYC  112 (222)
Q Consensus        97 ~--~~~~id~li~~ag~~  112 (222)
                      +  .++++|++||+|+..
T Consensus        62 ~~~~~~~~d~Vih~A~~~   79 (308)
T PRK11150         62 AGDDFGDIEAIFHEGACS   79 (308)
T ss_pred             cccccCCccEEEECceec
Confidence            2  235799999999853

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.41  E-value=6.4e-07  Score=74.40  Aligned_cols=97  Identities=16%  Similarity=0.135  Sum_probs=68.3

Q ss_pred             EEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          18 IITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        18 lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      |||||+|.||..++++|.++|  ++|.+.+++.....  ...+..           .....++++|+++.+++.++++. 
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~-----------~~~~~~~~~Di~d~~~l~~a~~g-   66 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK-----------SGVKEYIQGDITDPESLEEALEG-   66 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc-----------ccceeEEEeccccHHHHHHHhcC-
Confidence            699999999999999999999  68888887665322  111111           12333999999999999988764 


Q ss_pred             HhhccceeEEEechhhHHhhh----------HHHHHHHHHhhcCCCCeE
Q psy7936          96 NQTEANVHILINNAVYCILSN----------NILFYSILFYAIPGKNVN  134 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l~~----------~~~~~~~la~~~~~~gI~  134 (222)
                            .|++||+|+......          +..-++.+.....+.+|+
T Consensus        67 ------~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~Vk  109 (280)
T PF01073_consen   67 ------VDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVK  109 (280)
T ss_pred             ------CceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence                  599999998654221          445555555544455664

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.39  E-value=1.9e-06  Score=73.96  Aligned_cols=108  Identities=24%  Similarity=0.265  Sum_probs=81.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +.+||.|+ |++|+.+|..|++.| .+|++.+|+.+++.++....             ..++...++|+.+.+.+.++++
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-------------~~~v~~~~vD~~d~~al~~li~   67 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-------------GGKVEALQVDAADVDALVALIK   67 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-------------cccceeEEecccChHHHHHHHh
Confidence            57899999 999999999999999 79999999999988876543             3378899999999998888776


Q ss_pred             HHHhhccceeEEEechhhHHhhh-----------------HHHHHHHHHhhcCCCCeEEE---EEeCCcc
Q psy7936          94 DINQTEANVHILINNAVYCILSN-----------------NILFYSILFYAIPGKNVNVY---AVHPGIV  143 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~~-----------------~~~~~~~la~~~~~~gI~v~---~v~PG~v  143 (222)
                      ..       |++||++....-.+                 .......+..+..+.|+++.   -+.||.+
T Consensus        68 ~~-------d~VIn~~p~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi~  130 (389)
T COG1748          68 DF-------DLVINAAPPFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGIT  130 (389)
T ss_pred             cC-------CEEEEeCCchhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcchH
Confidence            43       99999988766222                 11111344445555666544   2688875

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.36  E-value=2.1e-06  Score=71.79  Aligned_cols=104  Identities=12%  Similarity=0.098  Sum_probs=65.7

Q ss_pred             EEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +|||||+|.||..+++.|.+.|+ .|++++|..... .+. .+               ....+..|+.+.+.++.+.+. 
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~---------------~~~~~~~d~~~~~~~~~~~~~-   62 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NL---------------ADLVIADYIDKEDFLDRLEKG-   62 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hh---------------hheeeeccCcchhHHHHHHhh-
Confidence            58999999999999999999998 788888754321 111 11               012456788877666655442 


Q ss_pred             HhhccceeEEEechhhHHhh---------hHHHHHHHHHhhcCCCCeEEEEEeC
Q psy7936          96 NQTEANVHILINNAVYCILS---------NNILFYSILFYAIPGKNVNVYAVHP  140 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l~---------~~~~~~~~la~~~~~~gI~v~~v~P  140 (222)
                        .+..+|++||+|+.....         .+...+..+.....+.++++..++-
T Consensus        63 --~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS  114 (314)
T TIGR02197        63 --AFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASS  114 (314)
T ss_pred             --ccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEcc
Confidence              235799999999864311         1333444444444444566655543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.36  E-value=2e-06  Score=79.69  Aligned_cols=84  Identities=15%  Similarity=0.117  Sum_probs=61.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC--CCEEEEEeCCh--hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI--GAKVIMACRDV--EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~--g~~v~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..|++|||||+|.||..+++.|.+.  +++|++++|..  .....+..   ..         ...++.++.+|+++.+.+
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~---~~---------~~~~v~~~~~Dl~d~~~~   72 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP---SK---------SSPNFKFVKGDIASADLV   72 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh---cc---------cCCCeEEEECCCCChHHH
Confidence            5689999999999999999999998  57899888753  22221111   00         133688899999998877


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ..++..     ..+|++||+|+...
T Consensus        73 ~~~~~~-----~~~D~ViHlAa~~~   92 (668)
T PLN02260         73 NYLLIT-----EGIDTIMHFAAQTH   92 (668)
T ss_pred             HHHHhh-----cCCCEEEECCCccC
Confidence            665432     36899999998743

>PRK05865 hypothetical protein; Provisional

Probab=98.36  E-value=2.8e-06  Score=79.95  Aligned_cols=71  Identities=14%  Similarity=0.219  Sum_probs=58.5

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+|.||.+++++|.++|++|++++|+....      +             ...+.++++|+.+..++.++++  
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-------------~~~v~~v~gDL~D~~~l~~al~--   60 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-------------PSSADFIAADIRDATAVESAMT--   60 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-------------ccCceEEEeeCCCHHHHHHHHh--
Confidence            589999999999999999999999999999975321      0             1246688999999998887665  


Q ss_pred             HhhccceeEEEechhhH
Q psy7936          96 NQTEANVHILINNAVYC  112 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~  112 (222)
                           .+|++||+|+..
T Consensus        61 -----~vD~VVHlAa~~   72 (854)
T PRK05865         61 -----GADVVAHCAWVR   72 (854)
T ss_pred             -----CCCEEEECCCcc
Confidence                 369999999764

>KOG4022|consensus

Probab=98.34  E-value=4.1e-05  Score=57.65  Aligned_cols=154  Identities=10%  Similarity=0.012  Sum_probs=100.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +-..++|-|+-+.+|.+|+..|-..++-|.-++.++..-                    ...-+.+..|-+=.+.-+.+.
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~--------------------Ad~sI~V~~~~swtEQe~~v~   61 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ--------------------ADSSILVDGNKSWTEQEQSVL   61 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc--------------------ccceEEecCCcchhHHHHHHH
Confidence            345789999999999999999999999877776544310                    111223333333223333344


Q ss_pred             HHHHhhc--cceeEEEechhhHH---------------------hhh---------------------------------
Q psy7936          93 QDINQTE--ANVHILINNAVYCI---------------------LSN---------------------------------  116 (222)
Q Consensus        93 ~~i~~~~--~~id~li~~ag~~~---------------------l~~---------------------------------  116 (222)
                      +++-+..  .++|.++|.||.+.                     ++.                                 
T Consensus        62 ~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMI  141 (236)
T KOG4022|consen   62 EQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMI  141 (236)
T ss_pred             HHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCccc
Confidence            4443333  37899999888776                     000                                 


Q ss_pred             --------HHHHHHHHHhhcC--CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 --------NILFYSILFYAIP--GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 --------~~~~~~~la~~~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                              +++++++|+.+-.  +.|-.+.+|.|=..||+|++...++..+..           +..-+.+++..+... 
T Consensus       142 GYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfss-----------WTPL~fi~e~flkWt-  209 (236)
T KOG4022|consen  142 GYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFSS-----------WTPLSFISEHFLKWT-  209 (236)
T ss_pred             chhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcccC-----------cccHHHHHHHHHHHh-
Confidence                    7888888887643  468899999999999999998766533332           455667777777663 


Q ss_pred             CCCccccccccc
Q psy7936         187 DEGAAKETGLYY  198 (222)
Q Consensus       187 ~~~~~~~~G~~i  198 (222)
                      .+..+--+|..+
T Consensus       210 t~~~RPssGsLl  221 (236)
T KOG4022|consen  210 TETSRPSSGSLL  221 (236)
T ss_pred             ccCCCCCCCceE
Confidence            333455567665

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.32  E-value=4.3e-06  Score=73.83  Aligned_cols=77  Identities=18%  Similarity=0.202  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++++++||||+|.||..+++.|.++|++|++++|......+   .+....        ...++.++..|+.+..     +
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~--------~~~~~~~i~~D~~~~~-----l  181 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHF--------SNPNFELIRHDVVEPI-----L  181 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhc--------cCCceEEEECCccChh-----h
Confidence            56789999999999999999999999999999875322111   111111        1335677888886542     1


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                             ..+|+|||+|+..
T Consensus       182 -------~~~D~ViHlAa~~  194 (442)
T PLN02206        182 -------LEVDQIYHLACPA  194 (442)
T ss_pred             -------cCCCEEEEeeeec
Confidence                   2479999999853

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.31  E-value=3.9e-06  Score=62.06  Aligned_cols=79  Identities=25%  Similarity=0.398  Sum_probs=58.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++++++++|.|+ ||+|++++..|.+.|+ +|+++.|+.++++++.+.+..            ..+.++  ++.+.   
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~------------~~~~~~--~~~~~---   69 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG------------VNIEAI--PLEDL---   69 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG------------CSEEEE--EGGGH---
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc------------ccccee--eHHHH---
Confidence            4678999999998 8999999999999998 699999999999998888722            233333  22222   


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .+..       ...|++|++.+...
T Consensus        70 ~~~~-------~~~DivI~aT~~~~   87 (135)
T PF01488_consen   70 EEAL-------QEADIVINATPSGM   87 (135)
T ss_dssp             CHHH-------HTESEEEE-SSTTS
T ss_pred             HHHH-------hhCCeEEEecCCCC
Confidence            2222       35799999987653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.31  E-value=6.6e-06  Score=67.04  Aligned_cols=127  Identities=16%  Similarity=0.123  Sum_probs=63.6

Q ss_pred             EecCCCchHHHHHHHHHhCCC--EEEEEeCChh---HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh-hHHH-H
Q psy7936          19 ITGCNTGIGKVTAQTLYGIGA--KVIMACRDVE---KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK-SIRD-C   91 (222)
Q Consensus        19 VtGas~giG~~~a~~l~~~g~--~v~~~~r~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~-~   91 (222)
                      ||||||.||..+..+|++.+.  +|+++.|...   ..+++.+.+.+..-..........++.++..|++++. .+.. -
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  9999999763   2333332222110000000001568999999999865 1111 1


Q ss_pred             HHHHHhhccceeEEEechhhHHhh---------hHHHHHHHHHhhcCCCCeEEEEEeCCcccCCcC
Q psy7936          92 AQDINQTEANVHILINNAVYCILS---------NNILFYSILFYAIPGKNVNVYAVHPGIVKTELG  148 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~---------~~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~  148 (222)
                      .+.+.   ..+|++||||+...+.         |+.+....+......+..++..|+..++.....
T Consensus        81 ~~~L~---~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~  143 (249)
T PF07993_consen   81 YQELA---EEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRP  143 (249)
T ss_dssp             HHHHH---HH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-T
T ss_pred             hhccc---cccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCC
Confidence            11221   3579999999877732         233333333333333344888888766644433

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.28  E-value=6.4e-06  Score=72.59  Aligned_cols=104  Identities=12%  Similarity=0.061  Sum_probs=65.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ..++++||||+|.||..+++.|.++|++|++++|......+....+.           ...++.++..|+.+..      
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-----------~~~~~~~~~~Di~~~~------  181 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-----------GNPRFELIRHDVVEPI------  181 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-----------cCCceEEEECcccccc------
Confidence            34579999999999999999999999999999975321111111110           1235677788886531      


Q ss_pred             HHHHhhccceeEEEechhhHHh-----------hhHHHHHHHHHhhcCCCCeEEEEEe
Q psy7936          93 QDINQTEANVHILINNAVYCIL-----------SNNILFYSILFYAIPGKNVNVYAVH  139 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l-----------~~~~~~~~~la~~~~~~gI~v~~v~  139 (222)
                        +    ..+|+|||+|+....           ..+...+..+.....+.|+++..++
T Consensus       182 --~----~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~S  233 (436)
T PLN02166        182 --L----LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTS  233 (436)
T ss_pred             --c----cCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEC
Confidence              1    257999999975321           1133334444444444455655543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.27  E-value=1.8e-06  Score=71.49  Aligned_cols=153  Identities=9%  Similarity=-0.030  Sum_probs=88.0

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||||.+|..++++|.+.|++|.++.|+.++..                   ...+..+.+|+.|.+++..+++..
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------------------~~~~~~~~~d~~d~~~l~~a~~~~   61 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------------------GPNEKHVKFDWLDEDTWDNPFSSD   61 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------------------CCCCccccccCCCHHHHHHHHhcc
Confidence            3799999999999999999999999999999986431                   012334567888888887776543


Q ss_pred             Hhhccc-eeEEEechhhHH-----hhh---------------HH--------HHHHHHHhhcCC-CCeEEEEEeCCcccC
Q psy7936          96 NQTEAN-VHILINNAVYCI-----LSN---------------NI--------LFYSILFYAIPG-KNVNVYAVHPGIVKT  145 (222)
Q Consensus        96 ~~~~~~-id~li~~ag~~~-----l~~---------------~~--------~~~~~la~~~~~-~gI~v~~v~PG~v~T  145 (222)
                       +.... +|.++++++...     ..+               +.        .........+.. .|+....+.|+++-.
T Consensus        62 -~~~~g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~~~~~~~~~l~~~~gi~~tilRp~~f~~  140 (285)
T TIGR03649        62 -DGMEPEISAVYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGGPAMGQVHAHLDSLGGVEYTVLRPTWFME  140 (285)
T ss_pred             -cCcCCceeEEEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCCchHHHHHHHHHhccCCCEEEEeccHHhh
Confidence             22223 777777665321     001               00        000001111223 388999999997654


Q ss_pred             CcCCCCCCCCCcc--hhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         146 ELGRYMDDTYFPG--ARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       146 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                      ++...........  .......-.+..+.+++|+|+.+..++..+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~  185 (285)
T TIGR03649       141 NFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDK  185 (285)
T ss_pred             hhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCC
Confidence            4322110000000  000000011112678999999999987654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.23  E-value=7.6e-06  Score=67.21  Aligned_cols=79  Identities=10%  Similarity=0.100  Sum_probs=61.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC--EEEEEeC-----ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA--KVIMACR-----DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +++|||||.|.||..+++.+.+...  +|+.++.     |.+.+..+.               ...+..+++.|+.|.+.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~---------------~~~~~~fv~~DI~D~~~   65 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE---------------DSPRYRFVQGDICDREL   65 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh---------------cCCCceEEeccccCHHH
Confidence            4689999999999999999998865  4777765     344443322               24589999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.+++++.     .+|+++|-|+=..
T Consensus        66 v~~~~~~~-----~~D~VvhfAAESH   86 (340)
T COG1088          66 VDRLFKEY-----QPDAVVHFAAESH   86 (340)
T ss_pred             HHHHHHhc-----CCCeEEEechhcc
Confidence            99888764     6799999987555

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.23  E-value=5.5e-06  Score=68.22  Aligned_cols=90  Identities=21%  Similarity=0.253  Sum_probs=74.8

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDIN   96 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~   96 (222)
                      +||||++|=+|.++.+.|. .+.+|+.++|..                               +|++|.+.+.+++.+. 
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------------------------~Ditd~~~v~~~i~~~-   49 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-------------------------------LDITDPDAVLEVIRET-   49 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-------------------------------ccccChHHHHHHHHhh-
Confidence            8999999999999999999 567888776433                               6999999999999887 


Q ss_pred             hhccceeEEEechhhHHhhh-----------HHHHHHHHHhhcCCCCeEEEEEeCCcc
Q psy7936          97 QTEANVHILINNAVYCILSN-----------NILFYSILFYAIPGKNVNVYAVHPGIV  143 (222)
Q Consensus        97 ~~~~~id~li~~ag~~~l~~-----------~~~~~~~la~~~~~~gI~v~~v~PG~v  143 (222)
                          ++|++||+|++...-.           +......+|+...+.|.++..|+..+|
T Consensus        50 ----~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyV  103 (281)
T COG1091          50 ----RPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYV  103 (281)
T ss_pred             ----CCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceE
Confidence                8999999999877222           556667788888888999988887776

>PRK12320 hypothetical protein; Provisional

Probab=98.19  E-value=9.3e-06  Score=74.95  Aligned_cols=97  Identities=14%  Similarity=0.099  Sum_probs=65.9

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+|.||..+++.|.+.|++|++++|+....                   ....+.++++|+.+.. +.+++   
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-------------------~~~~ve~v~~Dl~d~~-l~~al---   58 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-------------------LDPRVDYVCASLRNPV-LQELA---   58 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-------------------ccCCceEEEccCCCHH-HHHHh---
Confidence            599999999999999999999999999999864321                   1225678899999873 33322   


Q ss_pred             HhhccceeEEEechhhHHhh---hHHHHHHHHHhhcCCCCeEEEEEe
Q psy7936          96 NQTEANVHILINNAVYCILS---NNILFYSILFYAIPGKNVNVYAVH  139 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l~---~~~~~~~~la~~~~~~gI~v~~v~  139 (222)
                          ..+|++||+|+.....   .+...+..+.....+.|+++..++
T Consensus        59 ----~~~D~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~GvRiV~~S  101 (699)
T PRK12320         59 ----GEADAVIHLAPVDTSAPGGVGITGLAHVANAAARAGARLLFVS  101 (699)
T ss_pred             ----cCCCEEEEcCccCccchhhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence                2579999999864311   122333334433344566666555

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.16  E-value=7.4e-06  Score=71.04  Aligned_cols=77  Identities=25%  Similarity=0.315  Sum_probs=60.6

Q ss_pred             EEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++|.|+ |.+|..+++.|++++.  +|++.+|+.++++++.+.+            ...++.+.++|+.|.+++.++++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~------------~~~~~~~~~~d~~~~~~l~~~~~~   67 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL------------LGDRVEAVQVDVNDPESLAELLRG   67 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--------------TTTTEEEEE--TTTHHHHHHHHTT
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc------------cccceeEEEEecCCHHHHHHHHhc
Confidence            689999 9999999999999974  8999999999998887765            256899999999999998887664


Q ss_pred             HHhhccceeEEEechhhHH
Q psy7936          95 INQTEANVHILINNAVYCI  113 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~  113 (222)
                      .       |++||++|...
T Consensus        68 ~-------dvVin~~gp~~   79 (386)
T PF03435_consen   68 C-------DVVINCAGPFF   79 (386)
T ss_dssp             S-------SEEEE-SSGGG
T ss_pred             C-------CEEEECCccch
Confidence            3       99999998764

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.14  E-value=5.6e-06  Score=68.99  Aligned_cols=81  Identities=16%  Similarity=0.172  Sum_probs=58.3

Q ss_pred             EEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHHh
Q psy7936          18 IITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQ   97 (222)
Q Consensus        18 lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~~   97 (222)
                      +||||+|.||..+++.|.+.|++|+++.+.                              ..+|+++.+++.++++..  
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~------------------------------~~~Dl~~~~~l~~~~~~~--   48 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH------------------------------KELDLTRQADVEAFFAKE--   48 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc------------------------------ccCCCCCHHHHHHHHhcc--
Confidence            699999999999999999999977765321                              136999988888876653  


Q ss_pred             hccceeEEEechhhHH------------hhhHHHHHHHHHhhcCCCCe
Q psy7936          98 TEANVHILINNAVYCI------------LSNNILFYSILFYAIPGKNV  133 (222)
Q Consensus        98 ~~~~id~li~~ag~~~------------l~~~~~~~~~la~~~~~~gI  133 (222)
                         .+|++||+|+...            ...+...+..+...+.+.++
T Consensus        49 ---~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~   93 (306)
T PLN02725         49 ---KPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGV   93 (306)
T ss_pred             ---CCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCC
Confidence               5799999997632            11144455556655555554

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.12  E-value=1.1e-05  Score=71.21  Aligned_cols=78  Identities=19%  Similarity=0.283  Sum_probs=57.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++++|+++|+|+++ +|.++|+.|++.|++|++++++. +.+++..+.+...            .+.++..|..+     
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~------------~~~~~~~~~~~-----   63 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL------------GIELVLGEYPE-----   63 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc------------CCEEEeCCcch-----
Confidence            56889999999888 99999999999999999999975 4454444444331            23456666665     


Q ss_pred             HHHHHHHhhccceeEEEechhhHH
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                             +..+.+|++|+++|+..
T Consensus        64 -------~~~~~~d~vv~~~g~~~   80 (450)
T PRK14106         64 -------EFLEGVDLVVVSPGVPL   80 (450)
T ss_pred             -------hHhhcCCEEEECCCCCC
Confidence                   11246788888888654

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.11  E-value=5.5e-05  Score=61.67  Aligned_cols=177  Identities=17%  Similarity=0.143  Sum_probs=95.1

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCC-CCeEEEEec--CCCCh--------
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK-PGEVLIKKL--DLASF--------   85 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~--D~~~~--------   85 (222)
                      ++|||+||-||++++..|.+.|++|+++.|+..+............+.. .+... +.++++-.+  .+.+.        
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~-~~~~~~~~DavINLAG~~I~~rrWt~~~K~   79 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGL-ADALTLGIDAVINLAGEPIAERRWTEKQKE   79 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchh-hhcccCCCCEEEECCCCccccccCCHHHHH
Confidence            5899999999999999999999999999998876544332110000000 00000 112222111  12211        


Q ss_pred             -------hhHHHHHHHHHhhccceeEEEechhhHHhhh-------------------HHHHHHHHHhhcCCCCeEEEEEe
Q psy7936          86 -------KSIRDCAQDINQTEANVHILINNAVYCILSN-------------------NILFYSILFYAIPGKNVNVYAVH  139 (222)
Q Consensus        86 -------~~v~~~~~~i~~~~~~id~li~~ag~~~l~~-------------------~~~~~~~la~~~~~~gI~v~~v~  139 (222)
                             ..-+.+.+.+.+...++.++|+..++....+                   +..-=+..+......|+||..+-
T Consensus        80 ~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllR  159 (297)
T COG1090          80 EIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLR  159 (297)
T ss_pred             HHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEE
Confidence                   2223444555555567777777765554111                   23333334444456799999999


Q ss_pred             CCcccCC---cCCCCCCCCCcch-hhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccc
Q psy7936         140 PGIVKTE---LGRYMDDTYFPGA-RTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLY  197 (222)
Q Consensus       140 PG~v~T~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~  197 (222)
                      -|.|-.+   +...+.+...... .+...--.+.-|...||..+.|.|+..+.   .+.|-+
T Consensus       160 tGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~---~lsGp~  218 (297)
T COG1090         160 TGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENE---QLSGPF  218 (297)
T ss_pred             EEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCc---CCCCcc
Confidence            9988553   2222221100000 00110001122789999999999997553   456644

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.10  E-value=1.4e-05  Score=73.87  Aligned_cols=83  Identities=14%  Similarity=0.057  Sum_probs=56.8

Q ss_pred             EEEEecCCCchHHHHHHHHH--hCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH--HHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLY--GIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI--RDC   91 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~--~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v--~~~   91 (222)
                      +++||||+|.||..++++|+  ..|++|++++|+... ..+.......         ...++.++.+|+++....  ...
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~---------~~~~v~~~~~Dl~~~~~~~~~~~   71 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYW---------GADRVVPLVGDLTEPGLGLSEAD   71 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhc---------CCCcEEEEecccCCccCCcCHHH
Confidence            69999999999999999999  578999999996532 2222211111         124688899999985321  111


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+.+    ..+|++||+|+..
T Consensus        72 ~~~l----~~~D~Vih~Aa~~   88 (657)
T PRK07201         72 IAEL----GDIDHVVHLAAIY   88 (657)
T ss_pred             HHHh----cCCCEEEECceee
Confidence            1222    4689999999854

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.10  E-value=5.8e-06  Score=68.97  Aligned_cols=74  Identities=20%  Similarity=0.185  Sum_probs=57.4

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDIN   96 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~   96 (222)
                      +||||++|.||..++++|.+.|++|+.++|.........                 ..+.++.+|+.+...+...++.. 
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------------~~~~~~~~d~~~~~~~~~~~~~~-   64 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-----------------SGVEFVVLDLTDRDLVDELAKGV-   64 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-----------------cccceeeecccchHHHHHHHhcC-
Confidence            899999999999999999999999999999776433221                 25568889999885555444432 


Q ss_pred             hhccceeEEEechhhHH
Q psy7936          97 QTEANVHILINNAVYCI  113 (222)
Q Consensus        97 ~~~~~id~li~~ag~~~  113 (222)
                          . |.+||+|+...
T Consensus        65 ----~-d~vih~aa~~~   76 (314)
T COG0451          65 ----P-DAVIHLAAQSS   76 (314)
T ss_pred             ----C-CEEEEccccCc
Confidence                2 99999997764

>KOG2733|consensus

Probab=98.10  E-value=2.9e-05  Score=65.25  Aligned_cols=86  Identities=17%  Similarity=0.192  Sum_probs=71.9

Q ss_pred             EEEEecCCCchHHHHHHHHHh----CCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYG----IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      -++|-||||.-|..++..+.+    .|..+.+.+||++++++..+.+......      +-.....+.||.+|++++.++
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~------~ls~~~i~i~D~~n~~Sl~em   80 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGT------DLSSSVILIADSANEASLDEM   80 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCC------CcccceEEEecCCCHHHHHHH
Confidence            589999999999999999999    6789999999999999999888765311      112344889999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh
Q psy7936          92 AQDINQTEANVHILINNAVYCIL  114 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l  114 (222)
                      ++..       .+++||+|...+
T Consensus        81 ak~~-------~vivN~vGPyR~   96 (423)
T KOG2733|consen   81 AKQA-------RVIVNCVGPYRF   96 (423)
T ss_pred             Hhhh-------EEEEecccccee
Confidence            8865       899999998873

>PLN02996 fatty acyl-CoA reductase

Probab=98.07  E-value=2e-05  Score=70.50  Aligned_cols=95  Identities=17%  Similarity=0.208  Sum_probs=59.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC---EEEEEeCChh---HHHHHHHHHHHh--h----hhhc--ccCCCCCeEEE
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA---KVIMACRDVE---KAETTASEIRKH--F----EVAT--SEDKKPGEVLI   77 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~---~v~~~~r~~~---~~~~~~~~i~~~--~----~~~~--~~~~~~~~~~~   77 (222)
                      +++|+++||||||.||..++.+|++.+.   +|+++.|...   ..+.+...+...  +    +...  .......++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            5799999999999999999999997642   7899988653   222222121110  0    0000  00000147899


Q ss_pred             EecCCCCh-------hhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          78 KKLDLASF-------KSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        78 ~~~D~~~~-------~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +..|++.+       +.++.+++       .+|++||+|+...
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~  124 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTN  124 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccC
Confidence            99999843       23333332       4799999998755

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.06  E-value=0.00018  Score=64.52  Aligned_cols=135  Identities=15%  Similarity=0.170  Sum_probs=95.8

Q ss_pred             CCCCCCCEEEEecCC-CchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           9 ASRLDGKTVIITGCN-TGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         9 ~~~~~~k~~lVtGas-~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ......+++|||||+ +.||.+++..|+..|++|+++..+- +.-.+..+.|=...      -+++..+.++..++++..
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~------a~~ga~LwvVpaN~~Sys  464 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARH------ARYGAALWVVPANMGSYS  464 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhh------CCCCceEEEEeccccchh
Confidence            345678999999999 7899999999999999999987654 33334444442221      125678888999999999


Q ss_pred             hHHHHHHHHHhhcc--------------ceeEEEechhhHH------------------hhhHHHHHHHHHhhcCCCC--
Q psy7936          87 SIRDCAQDINQTEA--------------NVHILINNAVYCI------------------LSNNILFYSILFYAIPGKN--  132 (222)
Q Consensus        87 ~v~~~~~~i~~~~~--------------~id~li~~ag~~~------------------l~~~~~~~~~la~~~~~~g--  132 (222)
                      +|..++++|-....              .++.+|-.|+...                  |.|+..++-.++..-...|  
T Consensus       465 DVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~  544 (866)
T COG4982         465 DVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVD  544 (866)
T ss_pred             hHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcc
Confidence            99999999844321              3567777776544                  4456666666666555554  


Q ss_pred             eEEEEEeCCcccCCcCC
Q psy7936         133 VNVYAVHPGIVKTELGR  149 (222)
Q Consensus       133 I~v~~v~PG~v~T~~~~  149 (222)
                      -|+..|.||-=+-.|+-
T Consensus       545 ~R~hVVLPgSPNrG~FG  561 (866)
T COG4982         545 TRLHVVLPGSPNRGMFG  561 (866)
T ss_pred             cceEEEecCCCCCCccC
Confidence            47888999965545543

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.04  E-value=2.5e-05  Score=71.16  Aligned_cols=94  Identities=17%  Similarity=0.240  Sum_probs=60.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC---EEEEEeCChh---HHHHHHHHH---------HHhhhhhcccCCCCCeEE
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA---KVIMACRDVE---KAETTASEI---------RKHFEVATSEDKKPGEVL   76 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~---~v~~~~r~~~---~~~~~~~~i---------~~~~~~~~~~~~~~~~~~   76 (222)
                      +.+|+++||||||.||..++.+|++.+.   +|+++.|...   ..+++.+++         ++...... ..--..++.
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~-~~~~~~Ki~  195 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSY-QSFMLSKLV  195 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccc-cccccccEE
Confidence            4789999999999999999999998653   7899988542   222322222         11110000 000024789


Q ss_pred             EEecCCCChh------hHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          77 IKKLDLASFK------SIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        77 ~~~~D~~~~~------~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++..|++++.      ..+.+.+       .+|++||+|+...
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~  231 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTT  231 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccc
Confidence            9999999873      2332222       4799999998765

>PLN02778 3,5-epimerase/4-reductase

Probab=98.01  E-value=2.9e-05  Score=64.99  Aligned_cols=29  Identities=17%  Similarity=0.129  Sum_probs=26.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEE
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIM   43 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~   43 (222)
                      +++|||||+|.||..+++.|.++|++|++
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~   38 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHY   38 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEE
Confidence            57999999999999999999999998864

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.99  E-value=0.00011  Score=62.39  Aligned_cols=89  Identities=22%  Similarity=0.235  Sum_probs=59.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChh---HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh-----
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVE---KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF-----   85 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~-----   85 (222)
                      +++++|||||.+|..++..|...- ++|++..|-..   ..+++.+.+....   +-+.....++..+..|++.+     
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~---~~~e~~~~ri~vv~gDl~e~~lGL~   77 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYR---HWDELSADRVEVVAGDLAEPDLGLS   77 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhh---hhhhhhcceEEEEecccccccCCCC
Confidence            478999999999999999998764 59999987432   3333333333110   00011366899999999843     


Q ss_pred             -hhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          86 -KSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        86 -~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                       ...+++.+       .+|.+|||++...
T Consensus        78 ~~~~~~La~-------~vD~I~H~gA~Vn   99 (382)
T COG3320          78 ERTWQELAE-------NVDLIIHNAALVN   99 (382)
T ss_pred             HHHHHHHhh-------hcceEEecchhhc
Confidence             23333333       5799999998666

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.98  E-value=2.5e-05  Score=62.76  Aligned_cols=75  Identities=16%  Similarity=0.233  Sum_probs=54.8

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDIN   96 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~   96 (222)
                      ++|+||+|.+|+.+++.|.+.+++|.++.|+..+  +..+.++..          +.  .++..|+.+.+++.++++   
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~----------g~--~vv~~d~~~~~~l~~al~---   63 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL----------GA--EVVEADYDDPESLVAALK---   63 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT----------TT--EEEES-TT-HHHHHHHHT---
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc----------cc--eEeecccCCHHHHHHHHc---
Confidence            6899999999999999999999999999998832  223333332          22  456899998888877665   


Q ss_pred             hhccceeEEEechhhH
Q psy7936          97 QTEANVHILINNAVYC  112 (222)
Q Consensus        97 ~~~~~id~li~~ag~~  112 (222)
                          .+|.+|++.+..
T Consensus        64 ----g~d~v~~~~~~~   75 (233)
T PF05368_consen   64 ----GVDAVFSVTPPS   75 (233)
T ss_dssp             ----TCSEEEEESSCS
T ss_pred             ----CCceEEeecCcc
Confidence                458888877743

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.95  E-value=4e-05  Score=65.07  Aligned_cols=48  Identities=25%  Similarity=0.428  Sum_probs=41.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhC-C-CEEEEEeCChhHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGI-G-AKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~-g-~~v~~~~r~~~~~~~~~~~i   58 (222)
                      ++++|+++||||+|.||..++++|+++ | .++++++|+.+++.++.+++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            578999999999999999999999864 5 49999999988887766544

>KOG2865|consensus

Probab=97.92  E-value=2.6e-05  Score=63.79  Aligned_cols=87  Identities=23%  Similarity=0.298  Sum_probs=68.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .++|-++-|-|||+.+|+.++.+|++.|.+|++-.|-.+.--.-.+-+.           .-+++.++..|+.|++||++
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmG-----------dLGQvl~~~fd~~DedSIr~  126 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMG-----------DLGQVLFMKFDLRDEDSIRA  126 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecc-----------cccceeeeccCCCCHHHHHH
Confidence            4578889999999999999999999999999999986653211111111           24689999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS  115 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~  115 (222)
                      +++..       +++||-.|--.-+
T Consensus       127 vvk~s-------NVVINLIGrd~eT  144 (391)
T KOG2865|consen  127 VVKHS-------NVVINLIGRDYET  144 (391)
T ss_pred             HHHhC-------cEEEEeecccccc
Confidence            98865       8999988866633

>PLN00016 RNA-binding protein; Provisional

Probab=97.92  E-value=2.6e-05  Score=67.47  Aligned_cols=38  Identities=32%  Similarity=0.369  Sum_probs=34.8

Q ss_pred             CCCEEEEe----cCCCchHHHHHHHHHhCCCEEEEEeCChhH
Q psy7936          13 DGKTVIIT----GCNTGIGKVTAQTLYGIGAKVIMACRDVEK   50 (222)
Q Consensus        13 ~~k~~lVt----Gas~giG~~~a~~l~~~g~~v~~~~r~~~~   50 (222)
                      ..++++||    ||+|.||..+++.|.+.|++|++++|+...
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~   92 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP   92 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence            45789999    999999999999999999999999998764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.92  E-value=0.00016  Score=63.99  Aligned_cols=137  Identities=11%  Similarity=-0.067  Sum_probs=85.6

Q ss_pred             EecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH---H---H
Q psy7936          19 ITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD---C---A   92 (222)
Q Consensus        19 VtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~---~---~   92 (222)
                      |+||++|+|.++++.|...|+.|+.+.+......     ..           ...++..+.+|.+...+...   .   +
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~-----~~-----------~~~~~~~~~~d~~~~~~~~~l~~~~~~~  106 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA-----AG-----------WGDRFGALVFDATGITDPADLKALYEFF  106 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccc-----cC-----------cCCcccEEEEECCCCCCHHHHHHHHHHH
Confidence            7888899999999999999999998776554110     00           12233334455544433332   2   2


Q ss_pred             HHHHhhccceeEEEechhhHH--------h--hhHHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhh
Q psy7936          93 QDINQTEANVHILINNAVYCI--------L--SNNILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTL  162 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~--------l--~~~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  162 (222)
                      ........+---+|+......        .  ..+..++++++.|+ +++|++++|.|++                    
T Consensus       107 ~~~l~~l~~~griv~i~s~~~~~~~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~--------------------  165 (450)
T PRK08261        107 HPVLRSLAPCGRVVVLGRPPEAAADPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP--------------------  165 (450)
T ss_pred             HHHHHhccCCCEEEEEccccccCCchHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC--------------------
Confidence            223332211111222111111        1  11889999999999 7799999998874                    


Q ss_pred             HHHHHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         163 GRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       163 ~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                               ..+++++..+.|++ ++...+++|+.+...+
T Consensus       166 ---------~~~~~~~~~~~~l~-s~~~a~~~g~~i~~~~  195 (450)
T PRK08261        166 ---------GAEAGLESTLRFFL-SPRSAYVSGQVVRVGA  195 (450)
T ss_pred             ---------CCHHHHHHHHHHhc-CCccCCccCcEEEecC
Confidence                     25778888888885 5567899999995443

>PRK09620 hypothetical protein; Provisional

Probab=97.91  E-value=2e-05  Score=63.43  Aligned_cols=36  Identities=36%  Similarity=0.505  Sum_probs=32.0

Q ss_pred             CCCCEEEEecCC----------------CchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          12 LDGKTVIITGCN----------------TGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        12 ~~~k~~lVtGas----------------~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      |.||.+|||+|.                |.||.++|+.|+++|++|+++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            478999999885                889999999999999999988753

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=97.86  E-value=4.3e-05  Score=61.61  Aligned_cols=77  Identities=18%  Similarity=0.269  Sum_probs=50.1

Q ss_pred             CEEEEecCCCc-hHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTG-IGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      .+-.||+.++| ||.++|+.|+++|++|++++|+....        ..         +...+.++.+  .   +.....+
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~---------~~~~v~~i~v--~---s~~~m~~   73 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PE---------PHPNLSIIEI--E---NVDDLLE   73 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CC---------CCCCeEEEEE--e---cHHHHHH
Confidence            36678887766 99999999999999999998764210        00         1123444443  2   2233333


Q ss_pred             HHHhhccceeEEEechhhHH
Q psy7936          94 DINQTEANVHILINNAVYCI  113 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~  113 (222)
                      .+.+....+|++|||||+..
T Consensus        74 ~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         74 TLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             HHHHHhcCCCEEEeCCccCC
Confidence            33344457899999999865

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.81  E-value=4.5e-05  Score=62.42  Aligned_cols=87  Identities=17%  Similarity=0.152  Sum_probs=65.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh--HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE--KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +|++||||-||-=|..+|+.|++.|+.|+.+.|...  +...+  .|...      .+..+.++..+.+|++|..++.++
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri--~L~~~------~~~~~~~l~l~~gDLtD~~~l~r~   73 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI--HLYED------PHLNDPRLHLHYGDLTDSSNLLRI   73 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc--eeccc------cccCCceeEEEeccccchHHHHHH
Confidence            689999999999999999999999999999988643  22221  11111      111355689999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++.+     .+|-+.|-|+-..
T Consensus        74 l~~v-----~PdEIYNLaAQS~   90 (345)
T COG1089          74 LEEV-----QPDEIYNLAAQSH   90 (345)
T ss_pred             HHhc-----Cchhheecccccc
Confidence            9887     6777777765444

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.79  E-value=3.6e-05  Score=63.52  Aligned_cols=35  Identities=29%  Similarity=0.356  Sum_probs=32.3

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA   51 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~   51 (222)
                      +|||||+|.||..+++.|++.|++|++++|+.+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   35 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAG   35 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence            58999999999999999999999999999987643

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.74  E-value=0.00014  Score=59.46  Aligned_cols=63  Identities=29%  Similarity=0.342  Sum_probs=53.5

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      .++||||||.+|..+++.|.++|++|.+..|+.+......                 ..+.+...|+.++.++...++.+
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-----------------~~v~~~~~d~~~~~~l~~a~~G~   64 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-----------------GGVEVVLGDLRDPKSLVAGAKGV   64 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-----------------CCcEEEEeccCCHhHHHHHhccc
Confidence            5899999999999999999999999999999999876554                 25667888899888888776543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.73  E-value=0.00017  Score=67.00  Aligned_cols=91  Identities=14%  Similarity=0.037  Sum_probs=62.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      .+++|||||+|-||.++++.|.+.|++|..                                  ...|++|...+...+.
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~----------------------------------~~~~l~d~~~v~~~i~  425 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY----------------------------------GKGRLEDRSSLLADIR  425 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe----------------------------------eccccccHHHHHHHHH
Confidence            347999999999999999999999987621                                  1135667777766655


Q ss_pred             HHHhhccceeEEEechhhHHh--------------hhHHHHHHHHHhhcCCCCeEEEEEeCCcc
Q psy7936          94 DINQTEANVHILINNAVYCIL--------------SNNILFYSILFYAIPGKNVNVYAVHPGIV  143 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l--------------~~~~~~~~~la~~~~~~gI~v~~v~PG~v  143 (222)
                      ..     ++|++||+|+....              ..+...+..++....+.|++...++-+.+
T Consensus       426 ~~-----~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v  484 (668)
T PLN02260        426 NV-----KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCI  484 (668)
T ss_pred             hh-----CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccce
Confidence            43     68999999986520              11445566666666666777665545443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.72  E-value=0.0002  Score=53.77  Aligned_cols=48  Identities=35%  Similarity=0.572  Sum_probs=41.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIR   59 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~   59 (222)
                      ++++++++|+|+ +++|.++++.|.+.| .+|++++|+.++.+++.+.+.
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~   64 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG   64 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            467889999998 899999999999996 689999999998887776654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.71  E-value=0.00026  Score=58.47  Aligned_cols=48  Identities=31%  Similarity=0.437  Sum_probs=42.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      .++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~  162 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR  162 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            45789999999 6999999999999999999999999988888777643

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=97.70  E-value=0.00042  Score=57.70  Aligned_cols=120  Identities=17%  Similarity=0.132  Sum_probs=82.6

Q ss_pred             CCEEEEecC-CCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGC-NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGa-s~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ..+++|.|. +.-|++.+|..|-++|+.|+++..+.+.-+.+..+-             ..++.....|..+..++...+
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-------------~~dI~~L~ld~~~~~~~~~~l   69 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-------------RPDIRPLWLDDSDPSSIHASL   69 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-------------CCCCCCcccCCCCCcchHHHH
Confidence            357888885 689999999999999999999999887655444331             224556666666655555555


Q ss_pred             HHHHhhcc--------------ceeEEEechhhHH---------------------------------------------
Q psy7936          93 QDINQTEA--------------NVHILINNAVYCI---------------------------------------------  113 (222)
Q Consensus        93 ~~i~~~~~--------------~id~li~~ag~~~---------------------------------------------  113 (222)
                      .+..+...              .+..+|.......                                             
T Consensus        70 ~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~i  149 (299)
T PF08643_consen   70 SRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKI  149 (299)
T ss_pred             HHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceE
Confidence            44443322              2333333322111                                             


Q ss_pred             ---------hh-------------hHHHHHHHHHhhcCCCCeEEEEEeCCcccCC
Q psy7936         114 ---------LS-------------NNILFYSILFYAIPGKNVNVYAVHPGIVKTE  146 (222)
Q Consensus       114 ---------l~-------------~~~~~~~~la~~~~~~gI~v~~v~PG~v~T~  146 (222)
                               -.             .+.+|++.|.+|+.+++|.|..+.-|.++-.
T Consensus       150 il~~Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  150 ILFNPSISSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             EEEeCchhhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence                     00             0899999999999999999999999988755

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG1221|consensus

Probab=97.63  E-value=0.00022  Score=62.61  Aligned_cols=95  Identities=17%  Similarity=0.183  Sum_probs=58.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCC---CEEEEEeCCh---hHHH--------HHHHHHHHhhhhhcccCCCCCeEEE
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIG---AKVIMACRDV---EKAE--------TTASEIRKHFEVATSEDKKPGEVLI   77 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g---~~v~~~~r~~---~~~~--------~~~~~i~~~~~~~~~~~~~~~~~~~   77 (222)
                      +.+|+++||||||.+|..+..+|+..-   .+++++-|..   +.-+        .+.+.+++..-      .--.++..
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p------~~l~Kv~p   83 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKP------EALEKVVP   83 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCc------cceeccee
Confidence            578999999999999999999999763   2788887743   1111        22222322210      01236778


Q ss_pred             EecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          78 KKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        78 ~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +..|+++++---.--+ .......+|++||+|+...
T Consensus        84 i~GDi~~~~LGis~~D-~~~l~~eV~ivih~AAtvr  118 (467)
T KOG1221|consen   84 IAGDISEPDLGISESD-LRTLADEVNIVIHSAATVR  118 (467)
T ss_pred             ccccccCcccCCChHH-HHHHHhcCCEEEEeeeeec
Confidence            8888876542111100 0112236799999998755

>KOG1430|consensus

Probab=97.56  E-value=0.00018  Score=61.43  Aligned_cols=71  Identities=20%  Similarity=0.189  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++.+++||||+|.+|+.++++|.+.+  ..+.+.+.......-..+....          ...++.++++|+.+..++.+
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~----------~~~~v~~~~~D~~~~~~i~~   72 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF----------RSGRVTVILGDLLDANSISN   72 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc----------cCCceeEEecchhhhhhhhh
Confidence            56799999999999999999999998  5899988766421111111110          15688999999999998887


Q ss_pred             HHH
Q psy7936          91 CAQ   93 (222)
Q Consensus        91 ~~~   93 (222)
                      .+.
T Consensus        73 a~~   75 (361)
T KOG1430|consen   73 AFQ   75 (361)
T ss_pred             hcc
Confidence            654

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.50  E-value=0.00026  Score=62.58  Aligned_cols=48  Identities=23%  Similarity=0.277  Sum_probs=38.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR   59 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~   59 (222)
                      ++.+|+++|||+++ +|.++|+.|++.|++|++.+++........+.+.
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~   49 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL   49 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH
Confidence            36789999999986 9999999999999999999987644333334443

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.48  E-value=0.00038  Score=57.77  Aligned_cols=49  Identities=31%  Similarity=0.500  Sum_probs=43.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIR   59 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~   59 (222)
                      .++++|+++|+|+ ||+|++++..|...| .+|++++|+.++.+++.+.+.
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            3578899999997 899999999999999 599999999999888877664

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.45  E-value=0.00048  Score=53.67  Aligned_cols=81  Identities=22%  Similarity=0.290  Sum_probs=48.3

Q ss_pred             CCCCEEEEecC----------------CCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeE
Q psy7936          12 LDGKTVIITGC----------------NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEV   75 (222)
Q Consensus        12 ~~~k~~lVtGa----------------s~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~   75 (222)
                      |.||++|||+|                ||-+|.++|+.++.+|++|+++..... +.                  ++..+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~------------------~p~~~   61 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP------------------PPPGV   61 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-----------------------TTE
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc------------------ccccc
Confidence            46888888876                457899999999999999999886632 11                  11123


Q ss_pred             EEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHHhhh
Q psy7936          76 LIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSN  116 (222)
Q Consensus        76 ~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l~~  116 (222)
                        -..++.+.+++.+.+.+.   ...-|++|++|++.....
T Consensus        62 --~~i~v~sa~em~~~~~~~---~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   62 --KVIRVESAEEMLEAVKEL---LPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             --EEEE-SSHHHHHHHHHHH---GGGGSEEEE-SB--SEEE
T ss_pred             --eEEEecchhhhhhhhccc---cCcceeEEEecchhheee
Confidence              233456666666555544   344499999999877443

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.44  E-value=0.00068  Score=56.39  Aligned_cols=49  Identities=16%  Similarity=0.258  Sum_probs=42.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      ++++|.++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+.+..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~  171 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ  171 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh
Confidence            367899999987 8899999999999997 899999999999888877643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.40  E-value=0.00044  Score=62.48  Aligned_cols=48  Identities=35%  Similarity=0.504  Sum_probs=42.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      .++++|+++|+|+ +|+|++++..|++.|++|++++|+.++.+++.+.+
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3578899999999 69999999999999999999999988887776554

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.39  E-value=0.0013  Score=56.82  Aligned_cols=108  Identities=19%  Similarity=0.213  Sum_probs=64.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+.++.++|.|+ |.+|+..++.+...|++|++++|+.++++.+...+             +..   +..+..+.+.+.+
T Consensus       164 ~l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-------------g~~---v~~~~~~~~~l~~  226 (370)
T TIGR00518       164 GVEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-------------GGR---IHTRYSNAYEIED  226 (370)
T ss_pred             CCCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-------------Cce---eEeccCCHHHHHH
Confidence            356778999988 78999999999999999999999988766554332             111   1223344444433


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEE-EEeCCc
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVY-AVHPGI  142 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~-~v~PG~  142 (222)
                      .+       ...|++|++++......-..+++.+...+++.++-+. ++.||-
T Consensus       227 ~l-------~~aDvVI~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG  272 (370)
T TIGR00518       227 AV-------KRADLLIGAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGG  272 (370)
T ss_pred             HH-------ccCCEEEEccccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCC
Confidence            32       3469999998543211111122333333444444333 456663

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=97.39  E-value=0.001  Score=66.69  Aligned_cols=94  Identities=18%  Similarity=0.118  Sum_probs=58.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCC----CEEEEEeCChhHH---HHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIG----AKVIMACRDVEKA---ETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g----~~v~~~~r~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .++++||||+|.||..++.+|++.+    ++|+...|+....   +.+.+.+.....   .......++.++.+|+++..
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~---~~~~~~~~i~~~~gDl~~~~ 1047 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI---WDEEWASRIEVVLGDLSKEK 1047 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC---CchhhhcceEEEeccCCCcc
Confidence            5789999999999999999999887    6899999975432   222222221100   00001236889999998652


Q ss_pred             hH--HHHHHHHHhhccceeEEEechhhHH
Q psy7936          87 SI--RDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        87 ~v--~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      -.  ....+.+   ...+|++||||+...
T Consensus      1048 lgl~~~~~~~l---~~~~d~iiH~Aa~~~ 1073 (1389)
T TIGR03443      1048 FGLSDEKWSDL---TNEVDVIIHNGALVH 1073 (1389)
T ss_pred             CCcCHHHHHHH---HhcCCEEEECCcEec
Confidence            10  1111222   136799999997644

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.36  E-value=0.0015  Score=54.33  Aligned_cols=50  Identities=22%  Similarity=0.332  Sum_probs=44.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHh
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++.+.+...
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            467889999997 6799999999999998 8999999999999998887653

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.32  E-value=0.00041  Score=54.76  Aligned_cols=48  Identities=33%  Similarity=0.412  Sum_probs=41.8

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE   57 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   57 (222)
                      ..+++||+++|+|.. .+|..+++.|.+.|++|++++++.+.++++.+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            356899999999996 799999999999999999999998877766553

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.29  E-value=0.002  Score=53.67  Aligned_cols=49  Identities=27%  Similarity=0.351  Sum_probs=43.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      ++++|+++|.|+ ||.+++++..|++.|+ +|+++.|+.++.+++.+.+..
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~  173 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            457889999998 8899999999999998 899999999999998887654

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.29  E-value=0.00082  Score=58.85  Aligned_cols=48  Identities=23%  Similarity=0.459  Sum_probs=42.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEI   58 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i   58 (222)
                      .++++|+++|.|+ ||+|..+++.|...|+ +++++.|+.++.+++.+.+
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            4578999999999 8999999999999996 8999999998887776654

>PRK06849 hypothetical protein; Provisional

Probab=97.29  E-value=0.0028  Score=55.08  Aligned_cols=40  Identities=28%  Similarity=0.212  Sum_probs=35.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE   52 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~   52 (222)
                      +.+++||||+..++|..+++.|.+.|++|++++.+.....
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~   42 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLS   42 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHH
Confidence            3579999999999999999999999999999998875543

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.25  E-value=0.0026  Score=54.25  Aligned_cols=86  Identities=23%  Similarity=0.334  Sum_probs=62.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh---------------------hHHHHHHHHHHHhhhhhccc
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV---------------------EKAETTASEIRKHFEVATSE   68 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~i~~~~~~~~~~   68 (222)
                      .+++++++|.|+ ||+|..+|+.|+..|. +++++|++.                     .+.+.+.+.+++..      
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~in------   93 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKIN------   93 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHC------
Confidence            467789999997 6799999999999998 999998853                     23445556666654      


Q ss_pred             CCCCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          69 DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        69 ~~~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                        +..++..+..|++. +.+.+++       ...|++|.+.....
T Consensus        94 --p~v~i~~~~~~~~~-~~~~~~~-------~~~DlVid~~D~~~  128 (338)
T PRK12475         94 --SEVEIVPVVTDVTV-EELEELV-------KEVDLIIDATDNFD  128 (338)
T ss_pred             --CCcEEEEEeccCCH-HHHHHHh-------cCCCEEEEcCCCHH
Confidence              56677888888763 3444432       35699999876443

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.23  E-value=0.0015  Score=54.69  Aligned_cols=77  Identities=18%  Similarity=0.207  Sum_probs=61.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ..++|-||++..|.-+|++|+.+|.+-.+.+||.+++..+...+..             ....+.+.+  +..+.+.++ 
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~-------------~~~~~p~~~--p~~~~~~~~-   70 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP-------------EAAVFPLGV--PAALEAMAS-   70 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc-------------cccccCCCC--HHHHHHHHh-
Confidence            4689999999999999999999999999999999999998888743             333444443  444444433 


Q ss_pred             HHhhccceeEEEechhhHH
Q psy7936          95 INQTEANVHILINNAVYCI  113 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~  113 (222)
                            +.++++||+|.+.
T Consensus        71 ------~~~VVlncvGPyt   83 (382)
T COG3268          71 ------RTQVVLNCVGPYT   83 (382)
T ss_pred             ------cceEEEecccccc
Confidence                  5699999999887

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.12  E-value=0.0045  Score=48.90  Aligned_cols=86  Identities=23%  Similarity=0.296  Sum_probs=58.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDK   70 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~   70 (222)
                      .+.+++++|.| .||+|..+++.|+..|. +++++|.+                   ..+.+.+.+.+++..        
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n--------   88 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELN--------   88 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhC--------
Confidence            46778899998 56899999999999998 89999875                   234455556666543        


Q ss_pred             CCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        71 ~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      |..++..+...+.. +.+.++       +...|++|.+.....
T Consensus        89 p~v~i~~~~~~i~~-~~~~~~-------~~~~D~Vi~~~d~~~  123 (202)
T TIGR02356        89 SDIQVTALKERVTA-ENLELL-------INNVDLVLDCTDNFA  123 (202)
T ss_pred             CCCEEEEehhcCCH-HHHHHH-------HhCCCEEEECCCCHH
Confidence            45566666555543 233332       235699998875443

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.05  E-value=0.0037  Score=52.20  Aligned_cols=49  Identities=20%  Similarity=0.241  Sum_probs=40.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh---hHHHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV---EKAETTASEIR   59 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~i~   59 (222)
                      .++++|+++|.|+ ||-+++++..|+..|+ +|+++.|+.   ++.+++.+.+.
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            3568899999997 6679999999999997 899999995   46666666654

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.95  E-value=0.0075  Score=51.50  Aligned_cols=85  Identities=22%  Similarity=0.316  Sum_probs=58.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh---------------------hHHHHHHHHHHHhhhhhccc
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV---------------------EKAETTASEIRKHFEVATSE   68 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~i~~~~~~~~~~   68 (222)
                      .|..++++|.|+ ||+|..+++.|+..|. ++.+++.+.                     .+.+.+.+.+++..      
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~in------   93 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEIN------   93 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHC------
Confidence            456788999998 7899999999999998 999999753                     23333444555443      


Q ss_pred             CCCCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhH
Q psy7936          69 DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        69 ~~~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                        +..++..+..+++. +++..++       ...|++|.+....
T Consensus        94 --p~v~v~~~~~~~~~-~~~~~~~-------~~~DlVid~~Dn~  127 (339)
T PRK07688         94 --SDVRVEAIVQDVTA-EELEELV-------TGVDLIIDATDNF  127 (339)
T ss_pred             --CCcEEEEEeccCCH-HHHHHHH-------cCCCEEEEcCCCH
Confidence              45567777777753 3333332       2469999886644

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.95  E-value=0.0065  Score=52.64  Aligned_cols=86  Identities=19%  Similarity=0.230  Sum_probs=59.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDK   70 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~   70 (222)
                      .+.+++++|.|+ ||+|..++..|+..|. ++++++++                   ..+.+.+.+.+++..        
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n--------  202 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALN--------  202 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHC--------
Confidence            356778888866 7899999999999998 89999886                   345666666676653        


Q ss_pred             CCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        71 ~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      |..++..+...+.. +.+..++       ...|++|++.....
T Consensus       203 p~v~v~~~~~~~~~-~~~~~~~-------~~~D~Vv~~~d~~~  237 (376)
T PRK08762        203 PDVQVEAVQERVTS-DNVEALL-------QDVDVVVDGADNFP  237 (376)
T ss_pred             CCCEEEEEeccCCh-HHHHHHH-------hCCCEEEECCCCHH
Confidence            44556565555543 2333332       25699999976543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=96.94  E-value=0.0021  Score=54.62  Aligned_cols=115  Identities=10%  Similarity=-0.023  Sum_probs=65.6

Q ss_pred             EEEEecCCCchHHHHHHHHHhCC-------CEEEEEeCChh--HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIG-------AKVIMACRDVE--KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g-------~~v~~~~r~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      +++||||+|.+|..++..|+..+       ..|++++++..  .++....++...             ......|+....
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-------------~~~~~~~~~~~~   70 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-------------AFPLLKSVVATT   70 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-------------cccccCCceecC
Confidence            58999999999999999999854       48999999653  122111111110             001111332222


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh---------hhHHHHHHHHHhhc----CCCCeEEEEEeCCcccCCcCCC
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL---------SNNILFYSILFYAI----PGKNVNVYAVHPGIVKTELGRY  150 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l---------~~~~~~~~~la~~~----~~~gI~v~~v~PG~v~T~~~~~  150 (222)
                      ++.       +.....|++|+.||...-         ..+..+++.++..+    .+.++-++.-+|--+.|.....
T Consensus        71 ~~~-------~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k  140 (325)
T cd01336          71 DPE-------EAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLK  140 (325)
T ss_pred             CHH-------HHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHH
Confidence            222       223467999999998651         12555555554433    2456666655666555544443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.94  E-value=0.0019  Score=49.81  Aligned_cols=73  Identities=16%  Similarity=0.147  Sum_probs=59.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      ++-|.||||-.|..|++...++|+.|+.+.||..++...                  ..+..++.|+.++.++.+.+.  
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~------------------~~~~i~q~Difd~~~~a~~l~--   61 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR------------------QGVTILQKDIFDLTSLASDLA--   61 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc------------------ccceeecccccChhhhHhhhc--
Confidence            467899999999999999999999999999999876443                  245678899999988754332  


Q ss_pred             HhhccceeEEEechhhHH
Q psy7936          96 NQTEANVHILINNAVYCI  113 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~  113 (222)
                           ..|++|..-|...
T Consensus        62 -----g~DaVIsA~~~~~   74 (211)
T COG2910          62 -----GHDAVISAFGAGA   74 (211)
T ss_pred             -----CCceEEEeccCCC
Confidence                 5699998877763

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.92  E-value=0.011  Score=43.87  Aligned_cols=105  Identities=19%  Similarity=0.250  Sum_probs=67.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      ++.|+|++|.+|..+|..|...+.  .+++++++++.++....++......      .........   .+.+.+     
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~------~~~~~~i~~---~~~~~~-----   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAP------LPSPVRITS---GDYEAL-----   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHG------STEEEEEEE---SSGGGG-----
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhh------ccccccccc---cccccc-----
Confidence            478999999999999999999875  8999999998888877777664310      112222222   332222     


Q ss_pred             HHHhhccceeEEEechhhHH---------hhhHHHHHHHHHhhc---CCCCeEEEEEeC
Q psy7936          94 DINQTEANVHILINNAVYCI---------LSNNILFYSILFYAI---PGKNVNVYAVHP  140 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~---------l~~~~~~~~~la~~~---~~~gI~v~~v~P  140 (222)
                            ..-|++|..+|...         +..+..+++.++..+   .++++-+..-.|
T Consensus        68 ------~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNP  120 (141)
T PF00056_consen   68 ------KDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNP  120 (141)
T ss_dssp             ------TTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSS
T ss_pred             ------ccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCc
Confidence                  25699999999865         222444444444432   355665554444

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.92  E-value=0.011  Score=48.05  Aligned_cols=86  Identities=15%  Similarity=0.208  Sum_probs=58.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDK   70 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~   70 (222)
                      .+++++++|.|+ ||+|..+++.|+..|. +++++|...                   .+.+.+.+.+++..        
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~ln--------   99 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARIN--------   99 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHC--------
Confidence            357789999998 8999999999999998 888887532                   23444455565543        


Q ss_pred             CCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        71 ~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      |..++..+...+.. +.+..+       +...|++|.+.....
T Consensus       100 p~v~i~~~~~~i~~-~~~~~~-------~~~~DiVi~~~D~~~  134 (245)
T PRK05690        100 PHIAIETINARLDD-DELAAL-------IAGHDLVLDCTDNVA  134 (245)
T ss_pred             CCCEEEEEeccCCH-HHHHHH-------HhcCCEEEecCCCHH
Confidence            55667776666653 223222       235799998876443

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.90  E-value=0.0052  Score=52.04  Aligned_cols=44  Identities=20%  Similarity=0.304  Sum_probs=37.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      .|.+++|+|+++++|..+++.....|++|+.++++.++.+.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~  194 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKN  194 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            57899999999999999888777789999999999887665543

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.89  E-value=0.017  Score=49.04  Aligned_cols=100  Identities=18%  Similarity=0.252  Sum_probs=59.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      |.++||+||+||+|...++-.-..|+.++++..+.++.+ .+..+             +.+...   |..+..    +.+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-------------GAd~vi---~y~~~~----~~~  201 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-------------GADHVI---NYREED----FVE  201 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-------------CCCEEE---cCCccc----HHH
Confidence            789999999999998777766677877777777776665 44433             222111   222222    333


Q ss_pred             HHHhhc-c-ceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeCC
Q psy7936          94 DINQTE-A-NVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPG  141 (222)
Q Consensus        94 ~i~~~~-~-~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~PG  141 (222)
                      .+.+.. + .+|+++...|...+      .+ ....+++.|.-+..-.++
T Consensus       202 ~v~~~t~g~gvDvv~D~vG~~~~------~~-~l~~l~~~G~lv~ig~~~  244 (326)
T COG0604         202 QVRELTGGKGVDVVLDTVGGDTF------AA-SLAALAPGGRLVSIGALS  244 (326)
T ss_pred             HHHHHcCCCCceEEEECCCHHHH------HH-HHHHhccCCEEEEEecCC
Confidence            443333 2 69999999985543      22 223334445555544444

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.84  E-value=0.011  Score=49.49  Aligned_cols=82  Identities=20%  Similarity=0.319  Sum_probs=57.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+.+++|+|+++++|.++++.+...|++|++++++.+..+.+.    ..          +...   ..|..+......+.
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~----------~~~~---~~~~~~~~~~~~~~  228 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK----EL----------GADY---VIDYRKEDFVREVR  228 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc----------CCCe---EEecCChHHHHHHH
Confidence            5679999999999999999999999999999999887655432    11          1111   13555544444443


Q ss_pred             HHHHhhccceeEEEechhhHH
Q psy7936          93 QDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~  113 (222)
                      .....  ..+|.+++++|...
T Consensus       229 ~~~~~--~~~d~~i~~~g~~~  247 (342)
T cd08266         229 ELTGK--RGVDVVVEHVGAAT  247 (342)
T ss_pred             HHhCC--CCCcEEEECCcHHH
Confidence            33221  36899999998643

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.83  E-value=0.0061  Score=50.49  Aligned_cols=82  Identities=18%  Similarity=0.232  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+|+++++|.++++.+...|++|++++++.+..+.+. .+             +.+.   .+|..+....+.+.
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-------------g~~~---~~~~~~~~~~~~~~  206 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA-------------GADA---VFNYRAEDLADRIL  206 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-------------CCCE---EEeCCCcCHHHHHH
Confidence            5789999999999999999999999999999999887655442 11             1111   13444444444433


Q ss_pred             HHHHhhccceeEEEechhhHH
Q psy7936          93 QDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.. . ...+|.+++++|...
T Consensus       207 ~~~-~-~~~~d~vi~~~~~~~  225 (325)
T cd08253         207 AAT-A-GQGVDVIIEVLANVN  225 (325)
T ss_pred             HHc-C-CCceEEEEECCchHH
Confidence            222 1 236999999988543

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.80  E-value=0.012  Score=47.27  Aligned_cols=86  Identities=21%  Similarity=0.274  Sum_probs=59.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDK   70 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~   70 (222)
                      .+.+++++|.| .||+|.++++.|+..|. +++++|.+                   ..+.+.+.+.+++..        
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n--------   88 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAIN--------   88 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhC--------
Confidence            35678899998 56799999999999998 88888642                   234556666666654        


Q ss_pred             CCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        71 ~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      |..++..+..+++. +.+..++       ...|++|.+.....
T Consensus        89 p~~~i~~~~~~i~~-~~~~~~~-------~~~DvVi~~~d~~~  123 (228)
T cd00757          89 PDVEIEAYNERLDA-ENAEELI-------AGYDLVLDCTDNFA  123 (228)
T ss_pred             CCCEEEEecceeCH-HHHHHHH-------hCCCEEEEcCCCHH
Confidence            45567777766642 3333332       35799999877543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.79  E-value=0.012  Score=49.94  Aligned_cols=79  Identities=18%  Similarity=0.303  Sum_probs=52.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      .+++|+|+++++|..+++.....|+ +|+.+++++++.+.+.+.+             +.+..+   |..+ .++.+.+.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-------------Ga~~vi---~~~~-~~~~~~i~  218 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-------------GFDAAI---NYKT-DNVAERLR  218 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-------------CCcEEE---ECCC-CCHHHHHH
Confidence            7999999999999998877777798 8999999888765554433             212111   2122 22333333


Q ss_pred             HHHhhccceeEEEechhhH
Q psy7936          94 DINQTEANVHILINNAVYC  112 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~  112 (222)
                      ++..  ..+|+++.+.|..
T Consensus       219 ~~~~--~gvd~vid~~g~~  235 (345)
T cd08293         219 ELCP--EGVDVYFDNVGGE  235 (345)
T ss_pred             HHCC--CCceEEEECCCcH
Confidence            3322  4699999998853

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.79  E-value=0.0087  Score=49.47  Aligned_cols=42  Identities=36%  Similarity=0.555  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .+.+++|+|+++++|..+++.+...|++|++++++.+..+.+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC  180 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            577999999999999999999999999999999987765544

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>KOG1202|consensus

Probab=96.78  E-value=0.0072  Score=58.34  Aligned_cols=90  Identities=21%  Similarity=0.219  Sum_probs=71.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHH---HHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKA---ETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..|.++|+|+-+|+|+++|+.|.++|+ .+++++|+--+.   ......+++          .+.++.+--.|++..+..
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~----------~GVqV~vsT~nitt~~ga 1836 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRR----------RGVQVQVSTSNITTAEGA 1836 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHh----------cCeEEEEecccchhhhhH
Confidence            468999999999999999999999999 889999876331   223444544          367788778899999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +++++.. .+.+++-.++|-|.+..
T Consensus      1837 ~~Li~~s-~kl~~vGGiFnLA~VLR 1860 (2376)
T KOG1202|consen 1837 RGLIEES-NKLGPVGGIFNLAAVLR 1860 (2376)
T ss_pred             HHHHHHh-hhcccccchhhHHHHHH
Confidence            9998876 44578999999998876

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.74  E-value=0.013  Score=49.23  Aligned_cols=81  Identities=20%  Similarity=0.229  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|+|+++++|..+++..-..|++|+.++++.++.+.+. .+             +.+..+   |-.+.....+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~l-------------Ga~~vi---~~~~~~~~~~~~  200 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KL-------------GFDVAF---NYKTVKSLEETL  200 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-------------CCCEEE---eccccccHHHHH
Confidence            5789999999999999988777778999999999887655442 22             222111   222222333333


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      .....  +.+|+++.+.|..
T Consensus       201 ~~~~~--~gvdvv~d~~G~~  218 (325)
T TIGR02825       201 KKASP--DGYDCYFDNVGGE  218 (325)
T ss_pred             HHhCC--CCeEEEEECCCHH
Confidence            33321  3699999998853

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.74  E-value=0.0046  Score=55.26  Aligned_cols=47  Identities=34%  Similarity=0.417  Sum_probs=40.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE   57 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   57 (222)
                      .++++++++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.+.
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            3567899999996 7999999999999999999999998887766544

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.73  E-value=0.0087  Score=49.72  Aligned_cols=51  Identities=29%  Similarity=0.405  Sum_probs=44.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      .+.+++.++|.|| ||.+++++..|++.|+ +++++.|+.++.+++.+.+...
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~  173 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL  173 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence            3456899999987 5699999999999996 8999999999999999888764

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.73  E-value=0.016  Score=46.16  Aligned_cols=83  Identities=19%  Similarity=0.189  Sum_probs=56.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh------------------hHHHHHHHHHHHhhhhhcccCCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV------------------EKAETTASEIRKHFEVATSEDKKP   72 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~i~~~~~~~~~~~~~~   72 (222)
                      +..++++|.|+ ||+|..+++.|+..|. +++++|.+.                  .+.+.+.+.+++..        +.
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~ln--------p~   96 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEIN--------PF   96 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHC--------CC
Confidence            56778999996 7899999999999998 799998752                  23444455555543        45


Q ss_pred             CeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhh
Q psy7936          73 GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        73 ~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      .++..+...+++ +.+.++       +...|++|.+...
T Consensus        97 v~v~~~~~~i~~-~~~~~~-------~~~~DvVI~a~D~  127 (212)
T PRK08644         97 VEIEAHNEKIDE-DNIEEL-------FKDCDIVVEAFDN  127 (212)
T ss_pred             CEEEEEeeecCH-HHHHHH-------HcCCCEEEECCCC
Confidence            566666666654 233222       2357999987543

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.72  E-value=0.0086  Score=51.19  Aligned_cols=81  Identities=11%  Similarity=0.168  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|+|+++++|..+++.....|++|+.++++.++.+.+.+.+             +.+..+   |-.+..++.+.+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-------------Ga~~vi---~~~~~~~~~~~i  221 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-------------GFDEAF---NYKEEPDLDAAL  221 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-------------CCCEEE---ECCCcccHHHHH
Confidence            5789999999999999988777778999999998887755443232             222111   222112333333


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .....  +.+|+++.+.|.
T Consensus       222 ~~~~~--~gvD~v~d~vG~  238 (348)
T PLN03154        222 KRYFP--EGIDIYFDNVGG  238 (348)
T ss_pred             HHHCC--CCcEEEEECCCH
Confidence            33221  369999999984

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.68  E-value=0.02  Score=42.40  Aligned_cols=78  Identities=21%  Similarity=0.201  Sum_probs=53.9

Q ss_pred             EEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCCCCCeEE
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDKKPGEVL   76 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   76 (222)
                      ++|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+++..        |..++.
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~--------p~v~i~   72 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELN--------PGVNVT   72 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHC--------CCcEEE
Confidence            678887 8999999999999998 89998753                   123455556666553        456677


Q ss_pred             EEecCCCChhhHHHHHHHHHhhccceeEEEechhh
Q psy7936          77 IKKLDLASFKSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        77 ~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      .+..++.+...        .+...+.|++|.+...
T Consensus        73 ~~~~~~~~~~~--------~~~~~~~diVi~~~d~   99 (143)
T cd01483          73 AVPEGISEDNL--------DDFLDGVDLVIDAIDN   99 (143)
T ss_pred             EEeeecChhhH--------HHHhcCCCEEEECCCC
Confidence            77666654322        2223478999998775

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.68  E-value=0.034  Score=42.21  Aligned_cols=113  Identities=18%  Similarity=0.097  Sum_probs=68.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH-
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD-   94 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-   94 (222)
                      ++-+.|. |-+|..+|+.|++.|+.|++++|+.++.+++.+.--...+.. .+  --..+.++..=+.+...++.++.. 
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~-~e--~~~~~dvvi~~v~~~~~v~~v~~~~   78 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSP-AE--AAEQADVVILCVPDDDAVEAVLFGE   78 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSH-HH--HHHHBSEEEE-SSSHHHHHHHHHCT
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhh-hh--HhhcccceEeecccchhhhhhhhhh
Confidence            5667777 679999999999999999999999998887765410000000 00  000123444556777888888877 


Q ss_pred             -HHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEE
Q psy7936          95 -INQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        95 -i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~  137 (222)
                       +.....+=.++|++.-..     -..++.++.++.++|++...
T Consensus        79 ~i~~~l~~g~iiid~sT~~-----p~~~~~~~~~~~~~g~~~vd  117 (163)
T PF03446_consen   79 NILAGLRPGKIIIDMSTIS-----PETSRELAERLAAKGVRYVD  117 (163)
T ss_dssp             THGGGS-TTEEEEE-SS-------HHHHHHHHHHHHHTTEEEEE
T ss_pred             HHhhccccceEEEecCCcc-----hhhhhhhhhhhhhccceeee
Confidence             666554455666664433     33456677777777876554

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.68  E-value=0.013  Score=49.04  Aligned_cols=42  Identities=36%  Similarity=0.540  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .+.+++|+|+++++|+++++.+...|.+|+++.++.+..+.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~  203 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL  203 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            467899999999999999999999999999999888765443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>KOG1372|consensus

Probab=96.67  E-value=0.0059  Score=49.34  Aligned_cols=77  Identities=16%  Similarity=0.109  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH--HHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE--TTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ..|++||||-++-=|..++.-|+..|+.|..+-|...+.+  ++...-..     +..+ .+.....+-.|++|..++.+
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~n-----P~~h-~~~~mkLHYgDmTDss~L~k  100 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSN-----PHTH-NGASMKLHYGDMTDSSCLIK  100 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcC-----chhc-ccceeEEeeccccchHHHHH
Confidence            4569999999999999999999999999999887554322  22211111     0000 24567788899999999999


Q ss_pred             HHHHH
Q psy7936          91 CAQDI   95 (222)
Q Consensus        91 ~~~~i   95 (222)
                      +++.+
T Consensus       101 ~I~~i  105 (376)
T KOG1372|consen  101 LISTI  105 (376)
T ss_pred             HHhcc
Confidence            99877

>PTZ00325 malate dehydrogenase; Provisional

Probab=96.66  E-value=0.0051  Score=52.11  Aligned_cols=114  Identities=13%  Similarity=0.010  Sum_probs=66.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +.+++.|+|++|.+|..++..|+..+  ..+++++++.  .+....++....         . .  ....+.++..++.+
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~---------~-~--~~v~~~td~~~~~~   72 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHID---------T-P--AKVTGYADGELWEK   72 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcC---------c-C--ceEEEecCCCchHH
Confidence            45689999999999999999999665  4899999832  222222333221         1 1  22334444444333


Q ss_pred             HHHHHHhhccceeEEEechhhHHh---------hhHHHHHHHHHhhcCCCC---eEEEEEeCCcccCCc
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL---------SNNILFYSILFYAIPGKN---VNVYAVHPGIVKTEL  147 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l---------~~~~~~~~~la~~~~~~g---I~v~~v~PG~v~T~~  147 (222)
                      .+       ...|++|+++|....         ..+...++.+...+.+++   +-++.-.|=-+-|..
T Consensus        73 ~l-------~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~  134 (321)
T PTZ00325         73 AL-------RGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPI  134 (321)
T ss_pred             Hh-------CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHH
Confidence            22       246999999998552         224445666655554444   444444444444433

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.64  E-value=0.019  Score=49.35  Aligned_cols=85  Identities=18%  Similarity=0.198  Sum_probs=60.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDK   70 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~   70 (222)
                      .+.+++++|.|+ ||+|..+++.|+..|. +++++|...                   .+.+.+.+.+++..        
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n--------   95 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALN--------   95 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHC--------
Confidence            357788999988 7899999999999998 899988632                   34566666777654        


Q ss_pred             CCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhH
Q psy7936          71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        71 ~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      |..++..+...++.. +...++       ...|++|.+....
T Consensus        96 p~v~v~~~~~~i~~~-~~~~~~-------~~~DvVvd~~d~~  129 (355)
T PRK05597         96 PDVKVTVSVRRLTWS-NALDEL-------RDADVILDGSDNF  129 (355)
T ss_pred             CCcEEEEEEeecCHH-HHHHHH-------hCCCEEEECCCCH
Confidence            566777777666642 333332       2569999997643

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.64  E-value=0.027  Score=47.53  Aligned_cols=107  Identities=21%  Similarity=0.332  Sum_probs=66.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +.+++++|.|+ |.+|..+++.|...|. +|++++|+.++..++.+.+             +..  ..     +.+++.+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-------------g~~--~~-----~~~~~~~  234 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-------------GGN--AV-----PLDELLE  234 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-------------CCe--EE-----eHHHHHH
Confidence            67899999998 8999999999998775 8999999998887776554             111  11     1223333


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEe-CCcccCCcCC
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVH-PGIVKTELGR  149 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~-PG~v~T~~~~  149 (222)
                      .+       ...|++|.+.+....   ......+.......+.-+..++ |-.++.....
T Consensus       235 ~l-------~~aDvVi~at~~~~~---~~~~~~~~~~~~~~~~~viDlavPrdi~~~v~~  284 (311)
T cd05213         235 LL-------NEADVVISATGAPHY---AKIVERAMKKRSGKPRLIVDLAVPRDIEPEVGE  284 (311)
T ss_pred             HH-------hcCCEEEECCCCCch---HHHHHHHHhhCCCCCeEEEEeCCCCCCchhhcc
Confidence            22       246999999886654   1112222112222344555553 6666655443

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN00106 malate dehydrogenase

Probab=96.63  E-value=0.0034  Score=53.20  Aligned_cols=109  Identities=13%  Similarity=0.046  Sum_probs=66.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ..+++.|||++|.+|..++..|+..+.  .++++++++  .+....++....        .  ..  ...++++..++..
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~--------~--~~--~i~~~~~~~d~~~   82 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHIN--------T--PA--QVRGFLGDDQLGD   82 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCC--------c--Cc--eEEEEeCCCCHHH
Confidence            456899999999999999999997765  899999877  222122332211        1  11  1223333333333


Q ss_pred             HHHHHHhhccceeEEEechhhHH---------hhhHHHHHHHHHhhcC---CCCeEEEEEeCCc
Q psy7936          91 CAQDINQTEANVHILINNAVYCI---------LSNNILFYSILFYAIP---GKNVNVYAVHPGI  142 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~---------l~~~~~~~~~la~~~~---~~gI~v~~v~PG~  142 (222)
                      .+       ...|++|+.||...         +..+...++.+...+.   +.++-++.-+|=-
T Consensus        83 ~l-------~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD  139 (323)
T PLN00106         83 AL-------KGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVN  139 (323)
T ss_pred             Hc-------CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            22       35699999999865         2235556666655543   4455555556653

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.62  E-value=0.0071  Score=46.38  Aligned_cols=42  Identities=26%  Similarity=0.340  Sum_probs=36.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA   51 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~   51 (222)
                      .++.+|+++|.|++.-+|..+++.|.++|++|+++.|+.+.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l   81 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNL   81 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhH
Confidence            468999999999966679999999999999999999986443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.58  E-value=0.026  Score=41.37  Aligned_cols=81  Identities=23%  Similarity=0.293  Sum_probs=58.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCCCCC
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDKKPG   73 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~~~~   73 (222)
                      .++++|.|+ +|+|..+++.|+..|. ++.++|..                   ..+.+.+.+.+.+..        |..
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n--------p~~   72 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN--------PDV   72 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS--------TTS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc--------Cce
Confidence            356778776 4699999999999998 89998852                   234666677777665        677


Q ss_pred             eEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhh
Q psy7936          74 EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        74 ~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      ++..+..++. .+...++++       ..|++|.+...
T Consensus        73 ~v~~~~~~~~-~~~~~~~~~-------~~d~vi~~~d~  102 (135)
T PF00899_consen   73 EVEAIPEKID-EENIEELLK-------DYDIVIDCVDS  102 (135)
T ss_dssp             EEEEEESHCS-HHHHHHHHH-------TSSEEEEESSS
T ss_pred             eeeeeecccc-ccccccccc-------CCCEEEEecCC
Confidence            8888888883 344444442       45999988664

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.57  E-value=0.026  Score=44.55  Aligned_cols=82  Identities=22%  Similarity=0.236  Sum_probs=53.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC---hhHH---------------HHHHHHHHHhhhhhcccCCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD---VEKA---------------ETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~---~~~~---------------~~~~~~i~~~~~~~~~~~~~   71 (222)
                      .|..++++|.|+ ||+|..+|..|++.|. +++++|.+   ..++               +.+.+.+.+..        |
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~in--------p   88 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEIN--------P   88 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHC--------C
Confidence            356788999998 6799999999999998 79999876   2222               22233333332        4


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEech
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA  109 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~a  109 (222)
                      ..++..+..+++. +.+.++       +...|++|.+.
T Consensus        89 ~~~i~~~~~~i~~-~~~~~~-------~~~~DlVi~a~  118 (200)
T TIGR02354        89 YTEIEAYDEKITE-ENIDKF-------FKDADIVCEAF  118 (200)
T ss_pred             CCEEEEeeeeCCH-hHHHHH-------hcCCCEEEECC
Confidence            4566666666653 233322       23568888884

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.57  E-value=0.036  Score=49.02  Aligned_cols=41  Identities=34%  Similarity=0.433  Sum_probs=35.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      ++.|.||+|+||.++++.|.+.|++|++++|+.+...+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            57899999999999999999999999999999877655443

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.54  E-value=0.024  Score=43.67  Aligned_cols=78  Identities=18%  Similarity=0.207  Sum_probs=51.3

Q ss_pred             EEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh------------------hHHHHHHHHHHHhhhhhcccCCCCCeEEE
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV------------------EKAETTASEIRKHFEVATSEDKKPGEVLI   77 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   77 (222)
                      ++|.|+ ||+|..+++.|++.|. +++++|.+.                  .+.+.+.+.+++..        |..++..
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~ln--------p~v~i~~   72 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREIN--------PFVKIEA   72 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHC--------CCCEEEE
Confidence            677775 7899999999999998 799998754                  22333444454443        4556666


Q ss_pred             EecCCCChhhHHHHHHHHHhhccceeEEEechhh
Q psy7936          78 KKLDLASFKSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        78 ~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      +...+.. +.+.+++       ...|++|.+...
T Consensus        73 ~~~~~~~-~~~~~~l-------~~~DlVi~~~d~   98 (174)
T cd01487          73 INIKIDE-NNLEGLF-------GDCDIVVEAFDN   98 (174)
T ss_pred             EEeecCh-hhHHHHh-------cCCCEEEECCCC
Confidence            6666654 2333322       357999988543

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN00203 glutamyl-tRNA reductase

Probab=96.51  E-value=0.014  Score=52.58  Aligned_cols=47  Identities=21%  Similarity=0.387  Sum_probs=41.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEI   58 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i   58 (222)
                      ++++++++|.|+ |++|..+++.|...|+ +|+++.|+.++.+++.+.+
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            378999999999 9999999999999997 8999999999888776554

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.51  E-value=0.0053  Score=54.52  Aligned_cols=36  Identities=28%  Similarity=0.344  Sum_probs=31.6

Q ss_pred             CCCCCCEEEEecC----------------CCchHHHHHHHHHhCCCEEEEEe
Q psy7936          10 SRLDGKTVIITGC----------------NTGIGKVTAQTLYGIGAKVIMAC   45 (222)
Q Consensus        10 ~~~~~k~~lVtGa----------------s~giG~~~a~~l~~~g~~v~~~~   45 (222)
                      .+|.||.+|||+|                ||-+|.++|+.++.+|++|+++.
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~  303 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLIS  303 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEe
Confidence            3589999999987                34689999999999999999886

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.51  E-value=0.0069  Score=49.64  Aligned_cols=76  Identities=14%  Similarity=0.226  Sum_probs=55.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      .++|+|||+- |+.++..|.+.|++|+++.++....+.+.+                .....+..+..+.+++.+++.+.
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----------------~g~~~v~~g~l~~~~l~~~l~~~   64 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----------------HQALTVHTGALDPQELREFLKRH   64 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----------------cCCceEEECCCCHHHHHHHHHhc
Confidence            6899999997 999999999999999999988864433321                11123445556667776666543


Q ss_pred             HhhccceeEEEechhhHH
Q psy7936          96 NQTEANVHILINNAVYCI  113 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~  113 (222)
                           .+|++|+.+..+.
T Consensus        65 -----~i~~VIDAtHPfA   77 (256)
T TIGR00715        65 -----SIDILVDATHPFA   77 (256)
T ss_pred             -----CCCEEEEcCCHHH
Confidence                 7899999987665

This enzyme was found to be a monomer by gel filtration.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.49  E-value=0.0097  Score=52.41  Aligned_cols=47  Identities=36%  Similarity=0.581  Sum_probs=40.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEI   58 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i   58 (222)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++.+++.+.+
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            478899999987 8999999999999997 8999999998877666543

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.48  E-value=0.0057  Score=40.04  Aligned_cols=35  Identities=31%  Similarity=0.510  Sum_probs=22.9

Q ss_pred             CC-CEEEEecCCCchHHHHHHHHH-hCCCEEEEEeCC
Q psy7936          13 DG-KTVIITGCNTGIGKVTAQTLY-GIGAKVIMACRD   47 (222)
Q Consensus        13 ~~-k~~lVtGas~giG~~~a~~l~-~~g~~v~~~~r~   47 (222)
                      +| |++||+|+|+|.|++....++ ..|++.+.+...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            45 899999999999999444444 667777776643

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.47  E-value=0.051  Score=44.83  Aligned_cols=36  Identities=19%  Similarity=0.348  Sum_probs=29.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD   47 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~   47 (222)
                      .|.+..++|.|+ ||+|.++|..|+..|. ++++++.+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            356778888876 5799999999999996 89998853

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.46  E-value=0.012  Score=45.68  Aligned_cols=44  Identities=23%  Similarity=0.298  Sum_probs=36.9

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      ++.|.|+ |-+|..+|..++..|++|.+++++++.+++..+.+++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            3668888 7899999999999999999999999988887777765

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.46  E-value=0.075  Score=42.80  Aligned_cols=102  Identities=14%  Similarity=0.146  Sum_probs=76.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++.|+.+|=.|+.+|   -++..|++.|+.|+.+|-+++.++.........          +..+.+          ...
T Consensus        57 ~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~----------gv~i~y----------~~~  113 (243)
T COG2227          57 DLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALES----------GVNIDY----------RQA  113 (243)
T ss_pred             CCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhc----------cccccc----------hhh
Confidence            378999999999998   688999999999999999998877665444331          222222          122


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEE
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNV  135 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v  135 (222)
                      .++++....+++|+++|.=-.-.+.+-..|++..+.-+++-|+-+
T Consensus       114 ~~edl~~~~~~FDvV~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf  158 (243)
T COG2227         114 TVEDLASAGGQFDVVTCMEVLEHVPDPESFLRACAKLVKPGGILF  158 (243)
T ss_pred             hHHHHHhcCCCccEEEEhhHHHccCCHHHHHHHHHHHcCCCcEEE
Confidence            334444444789999999888888888889999999888877654

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.43  E-value=0.039  Score=44.52  Aligned_cols=87  Identities=23%  Similarity=0.227  Sum_probs=54.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDK   70 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~   70 (222)
                      .+.+.+++|.|. ||+|.++++.|++.|. +++++|.+.                   .+.+.+.+.+...+        
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~in--------   78 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDIN--------   78 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHC--------
Confidence            356778888876 4799999999999998 899988532                   23444455555543        


Q ss_pred             CCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        71 ~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      |..++..+...+.. ++...++      ...+|++|.+.....
T Consensus        79 P~~~V~~~~~~i~~-~~~~~l~------~~~~D~VvdaiD~~~  114 (231)
T cd00755          79 PECEVDAVEEFLTP-DNSEDLL------GGDPDFVVDAIDSIR  114 (231)
T ss_pred             CCcEEEEeeeecCH-hHHHHHh------cCCCCEEEEcCCCHH
Confidence            45556655554442 2333222      124788887754433

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.43  E-value=0.016  Score=46.52  Aligned_cols=101  Identities=18%  Similarity=0.217  Sum_probs=68.8

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      .++|.|+.. +|..+|+.|.+.|++|++++++++..++....              ...++.+++|-++.+.++++  .+
T Consensus         2 ~iiIiG~G~-vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~--------------~~~~~~v~gd~t~~~~L~~a--gi   64 (225)
T COG0569           2 KIIIIGAGR-VGRSVARELSEEGHNVVLIDRDEERVEEFLAD--------------ELDTHVVIGDATDEDVLEEA--GI   64 (225)
T ss_pred             EEEEECCcH-HHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh--------------hcceEEEEecCCCHHHHHhc--CC
Confidence            567777765 99999999999999999999999987764321              23677899999998887765  11


Q ss_pred             HhhccceeEEEechhhHHhhhHHHHHHHHHh-hcCCCCeEEEEEeC
Q psy7936          96 NQTEANVHILINNAVYCILSNNILFYSILFY-AIPGKNVNVYAVHP  140 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l~~~~~~~~~la~-~~~~~gI~v~~v~P  140 (222)
                          ...|++|...|.-..   +.+.-.++. ++.-+.+-+-+-+|
T Consensus        65 ----~~aD~vva~t~~d~~---N~i~~~la~~~~gv~~viar~~~~  103 (225)
T COG0569          65 ----DDADAVVAATGNDEV---NSVLALLALKEFGVPRVIARARNP  103 (225)
T ss_pred             ----CcCCEEEEeeCCCHH---HHHHHHHHHHhcCCCcEEEEecCH
Confidence                356888877664322   223333443 35555455444444

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.42  E-value=0.035  Score=40.51  Aligned_cols=115  Identities=17%  Similarity=0.149  Sum_probs=63.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .-++-|.|+ |-+|..+++.|.+.|+.|..+ +|+.++.++....+....-....+.....++  +-+-+.| +.+..++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDl--v~iavpD-daI~~va   85 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADL--VFIAVPD-DAIAEVA   85 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SE--EEE-S-C-CHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCE--EEEEech-HHHHHHH
Confidence            346889998 569999999999999987776 5777777766665532210000011122233  3344455 3888888


Q ss_pred             HHHHhh--ccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeC
Q psy7936          93 QDINQT--EANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHP  140 (222)
Q Consensus        93 ~~i~~~--~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~P  140 (222)
                      +.+...  +.+=.+++|+.|...+.-+..+        ...|..+.++||
T Consensus        86 ~~La~~~~~~~g~iVvHtSGa~~~~vL~p~--------~~~Ga~~~s~HP  127 (127)
T PF10727_consen   86 EQLAQYGAWRPGQIVVHTSGALGSDVLAPA--------RERGAIVASLHP  127 (127)
T ss_dssp             HHHHCC--S-TT-EEEES-SS--GGGGHHH--------HHTT-EEEEEEE
T ss_pred             HHHHHhccCCCCcEEEECCCCChHHhhhhH--------HHCCCeEEEeCc
Confidence            888765  3344699999997764322222        235667777776

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.41  E-value=0.013  Score=51.57  Aligned_cols=46  Identities=35%  Similarity=0.588  Sum_probs=40.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASE   57 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~   57 (222)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.++..++.+.
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            478899999997 999999999999999 5899999999877666554

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd00704 MDH Malate dehydrogenase

Probab=96.40  E-value=0.013  Score=49.72  Aligned_cols=107  Identities=14%  Similarity=0.024  Sum_probs=63.0

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC-------EEEEEeCCh--hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA-------KVIMACRDV--EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ++.||||+|.+|..++..|+..|.       .++++++++  +.++                        ...+|+.+..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~------------------------g~~~Dl~d~~   57 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE------------------------GVVMELQDCA   57 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc------------------------eeeeehhhhc
Confidence            578999999999999999998764       499999876  4322                        2233333331


Q ss_pred             hH--H--HHHHHHHhhccceeEEEechhhHH---------hhhHHHHHHHHHhhcC----CCCeEEEEEeCCcccCC
Q psy7936          87 SI--R--DCAQDINQTEANVHILINNAVYCI---------LSNNILFYSILFYAIP----GKNVNVYAVHPGIVKTE  146 (222)
Q Consensus        87 ~v--~--~~~~~i~~~~~~id~li~~ag~~~---------l~~~~~~~~~la~~~~----~~gI~v~~v~PG~v~T~  146 (222)
                      ..  .  .+.....+.....|++|+.||...         +..+..+++.++..+.    +.++-++.=+|--+-|.
T Consensus        58 ~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~  134 (323)
T cd00704          58 FPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNAL  134 (323)
T ss_pred             ccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHH
Confidence            00  0  000112233346799999999866         2225555666555442    44555444455433333

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.38  E-value=0.029  Score=47.27  Aligned_cols=80  Identities=14%  Similarity=0.132  Sum_probs=54.3

Q ss_pred             EEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCCCCCeEE
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDKKPGEVL   76 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~   76 (222)
                      ++|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+++..        |..++.
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lN--------p~v~V~   72 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFN--------PNVKIV   72 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHC--------CCCeEE
Confidence            678886 8999999999999998 899987521                   23444555555543        566777


Q ss_pred             EEecCCCChhhHHHHHHHHHhhccceeEEEechhhH
Q psy7936          77 IKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        77 ~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+..++.+......+       +...|++|++.-..
T Consensus        73 ~~~~~i~~~~~~~~f-------~~~~DvVv~a~Dn~  101 (312)
T cd01489          73 AYHANIKDPDFNVEF-------FKQFDLVFNALDNL  101 (312)
T ss_pred             EEeccCCCccchHHH-------HhcCCEEEECCCCH
Confidence            777777764222222       23579999886533

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.37  E-value=0.025  Score=47.09  Aligned_cols=81  Identities=17%  Similarity=0.290  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.|++|++|++..| +++-++++. |++|+.++-++++.+=+.+++.-            ..++    |-... +   +
T Consensus       150 ~GetvvVSaAaGaVG-svvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf------------D~~i----dyk~~-d---~  208 (340)
T COG2130         150 AGETVVVSAAAGAVG-SVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF------------DAGI----DYKAE-D---F  208 (340)
T ss_pred             CCCEEEEEecccccc-hHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC------------ceee----ecCcc-c---H
Confidence            689999999999999 566677764 88999999999987766655522            1222    22222 2   3


Q ss_pred             HHHHHhhc-cceeEEEechhhHHh
Q psy7936          92 AQDINQTE-ANVHILINNAVYCIL  114 (222)
Q Consensus        92 ~~~i~~~~-~~id~li~~ag~~~l  114 (222)
                      .+.+.+.. ..||+.+-|.|...+
T Consensus       209 ~~~L~~a~P~GIDvyfeNVGg~v~  232 (340)
T COG2130         209 AQALKEACPKGIDVYFENVGGEVL  232 (340)
T ss_pred             HHHHHHHCCCCeEEEEEcCCchHH
Confidence            33344444 379999999997774

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.37  E-value=0.043  Score=46.16  Aligned_cols=45  Identities=27%  Similarity=0.382  Sum_probs=39.1

Q ss_pred             EEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHh
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      ++.|.|+ |++|..++..|+..|  .+|++++++.+..+....++...
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~   48 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDA   48 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHH
Confidence            5788896 899999999999999  48999999999888888877654

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>KOG1198|consensus

Probab=96.35  E-value=0.026  Score=48.38  Aligned_cols=81  Identities=17%  Similarity=0.282  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|+.+||.||++|+|.+.++-....|+..+++.++.++.+ +.+.+.             .+   ...|-.+. ++.+.+
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~lG-------------Ad---~vvdy~~~-~~~e~~  218 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKLG-------------AD---EVVDYKDE-NVVELI  218 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHcC-------------Cc---EeecCCCH-HHHHHH
Confidence            6789999999999998887777777855555565665543 333332             12   12355553 333333


Q ss_pred             HHHHhhccceeEEEechhhHH
Q psy7936          93 QDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~  113 (222)
                      +...  ..++|+++-|.|...
T Consensus       219 kk~~--~~~~DvVlD~vg~~~  237 (347)
T KOG1198|consen  219 KKYT--GKGVDVVLDCVGGST  237 (347)
T ss_pred             Hhhc--CCCccEEEECCCCCc
Confidence            3322  568999999998643

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.33  E-value=0.013  Score=48.90  Aligned_cols=43  Identities=23%  Similarity=0.424  Sum_probs=37.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAET   53 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   53 (222)
                      .+++|++++|.|. |++|+.+++.|...|++|++++|+.+....
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4678999999999 669999999999999999999999875443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>KOG1429|consensus

Probab=96.32  E-value=0.011  Score=48.70  Aligned_cols=38  Identities=24%  Similarity=0.193  Sum_probs=34.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      +...+++++||||.|.||..++.+|...|..|++++.-
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~   60 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNY   60 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecc
Confidence            45678999999999999999999999999999999863

>PRK05086 malate dehydrogenase; Provisional

Probab=96.30  E-value=0.0062  Score=51.40  Aligned_cols=35  Identities=23%  Similarity=0.281  Sum_probs=28.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHh-C--CCEEEEEeCChh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYG-I--GAKVIMACRDVE   49 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~-~--g~~v~~~~r~~~   49 (222)
                      ++++|.||+|++|.+++..|.. .  +..+++++|++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            3689999999999999998855 3  347888898753

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.27  E-value=0.041  Score=46.55  Aligned_cols=112  Identities=15%  Similarity=0.175  Sum_probs=72.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .++++.|+|+ |.+|..+|..|+..|.  .+++++++++.++....++.....       ...++... .  .+.++   
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~-------~~~~~~i~-~--~~~~~---   70 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVP-------FTSPTKIY-A--GDYSD---   70 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhcc-------ccCCeEEE-e--CCHHH---
Confidence            4678999998 9999999999999987  799999999988888888776420       00122221 1  11111   


Q ss_pred             HHHHHHhhccceeEEEechhhHH---------hhhHHHHHHHHHhhcC---CCCeEEEEEeCCcccCC
Q psy7936          91 CAQDINQTEANVHILINNAVYCI---------LSNNILFYSILFYAIP---GKNVNVYAVHPGIVKTE  146 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~---------l~~~~~~~~~la~~~~---~~gI~v~~v~PG~v~T~  146 (222)
                              +..-|++|..||...         +..+..+++.++.++.   +.++-++.-.|--+-|.
T Consensus        71 --------~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP~d~~~~  130 (315)
T PRK00066         71 --------CKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVDILTY  130 (315)
T ss_pred             --------hCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCcHHHHHH
Confidence                    125599999998854         2225555555554443   34565555566654444

>KOG1203|consensus

Probab=96.25  E-value=0.017  Score=50.15  Aligned_cols=45  Identities=27%  Similarity=0.336  Sum_probs=40.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      .+-.+++|+||+|++|+-+++.|.+.|+.|..+.|+.+..+++..
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            455689999999999999999999999999999999988777765

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.15  E-value=0.03  Score=46.35  Aligned_cols=40  Identities=35%  Similarity=0.525  Sum_probs=35.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE   52 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~   52 (222)
                      .+++++|+|+++++|.++++.+...|++|+++.++.+..+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA  178 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5789999999999999999999999999999999887654

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.15  E-value=0.034  Score=44.79  Aligned_cols=78  Identities=23%  Similarity=0.286  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+.+++|+|+++ +|.++++.+...|.+|++++++++..+.+. .+             +...   ..|..+......+.
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-------------g~~~---~~~~~~~~~~~~~~  195 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-EL-------------GADH---VIDYKEEDLEEELR  195 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-Hh-------------CCce---eccCCcCCHHHHHH
Confidence            577999999998 999999988888999999999876654432 11             1111   12333333333332


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                         ......+|++|++++.
T Consensus       196 ---~~~~~~~d~vi~~~~~  211 (271)
T cd05188         196 ---LTGGGGADVVIDAVGG  211 (271)
T ss_pred             ---HhcCCCCCEEEECCCC
Confidence               2223579999999885

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.10  E-value=0.019  Score=47.51  Aligned_cols=43  Identities=21%  Similarity=0.289  Sum_probs=37.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASE   57 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~   57 (222)
                      +++++|.|+ ||.+++++..|.+.|+ +|+++.|+.++.+++.+.
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            468999996 8899999999999998 799999999988777654

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.09  E-value=0.072  Score=41.92  Aligned_cols=83  Identities=17%  Similarity=0.205  Sum_probs=54.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh---------------------hHHHHHHHHHHHhhhhhcccC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV---------------------EKAETTASEIRKHFEVATSED   69 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~i~~~~~~~~~~~   69 (222)
                      +++.+++|.|+++ +|.++++.|+..|. +++++|.+.                     .+.+.+.+.+++..       
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lN-------   88 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELN-------   88 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHC-------
Confidence            5667888887765 99999999999998 788887531                     12344455565554       


Q ss_pred             CCCCeEEEEecCCCC-hhhHHHHHHHHHhhccceeEEEechh
Q psy7936          70 KKPGEVLIKKLDLAS-FKSIRDCAQDINQTEANVHILINNAV  110 (222)
Q Consensus        70 ~~~~~~~~~~~D~~~-~~~v~~~~~~i~~~~~~id~li~~ag  110 (222)
                       |..++..+..++.+ .+....+       +...|++|.+..
T Consensus        89 -p~v~i~~~~~~~~~~~~~~~~~-------~~~~dvVi~~~d  122 (198)
T cd01485          89 -PNVKLSIVEEDSLSNDSNIEEY-------LQKFTLVIATEE  122 (198)
T ss_pred             -CCCEEEEEecccccchhhHHHH-------HhCCCEEEECCC
Confidence             56677776666643 2222222       235799998754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.07  E-value=0.056  Score=45.28  Aligned_cols=43  Identities=26%  Similarity=0.336  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      .|.+++|+||++++|..+++.....|++|+.+++++++.+.+.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~  185 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK  185 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            5789999999999999988877778999999998887655443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK04148 hypothetical protein; Provisional

Probab=96.07  E-value=0.029  Score=41.22  Aligned_cols=56  Identities=18%  Similarity=0.061  Sum_probs=43.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      +++.+++.|..  .|..+|..|.+.|++|+.++.++...+.+.+.                .+.++..|+.++.
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~----------------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL----------------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----------------CCeEEECcCCCCC
Confidence            45789999988  77888999999999999999999976655432                2456777776543

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.06  E-value=0.057  Score=42.45  Aligned_cols=81  Identities=15%  Similarity=0.256  Sum_probs=54.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      +.+++++|.|+ +|+|.++++.|+..|. ++.++|..                   ..+.+.+.+.+++..        |
T Consensus        19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lN--------p   89 (197)
T cd01492          19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALN--------P   89 (197)
T ss_pred             HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHC--------C
Confidence            46678888875 5599999999999998 89888743                   123455566666654        5


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechh
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAV  110 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag  110 (222)
                      ..++..+...+++  ....+       +..+|++|.+..
T Consensus        90 ~v~i~~~~~~~~~--~~~~~-------~~~~dvVi~~~~  119 (197)
T cd01492          90 RVKVSVDTDDISE--KPEEF-------FSQFDVVVATEL  119 (197)
T ss_pred             CCEEEEEecCccc--cHHHH-------HhCCCEEEECCC
Confidence            5566666655542  12222       235699998754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.05  E-value=0.047  Score=48.79  Aligned_cols=50  Identities=22%  Similarity=0.316  Sum_probs=38.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh-HHHHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-KAETTASEIRK   60 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~i~~   60 (222)
                      .+++++.++|.|+ |++|.++|+.|.++|++|++++++.. ....+.+.+++
T Consensus        12 ~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~   62 (480)
T PRK01438         12 SDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA   62 (480)
T ss_pred             cCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH
Confidence            4567899999997 67999999999999999999986653 33334444543

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=96.02  E-value=0.19  Score=41.05  Aligned_cols=105  Identities=14%  Similarity=0.115  Sum_probs=74.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+.++|=.|+..|   .++..|++.|.+|++++.+++.++...+.+....        ...++.++++|+.+....    
T Consensus        44 ~~~~vLDiGcG~G---~~a~~la~~g~~v~~vD~s~~~l~~a~~~~~~~g--------~~~~v~~~~~d~~~l~~~----  108 (255)
T PRK11036         44 RPLRVLDAGGGEG---QTAIKLAELGHQVILCDLSAEMIQRAKQAAEAKG--------VSDNMQFIHCAAQDIAQH----  108 (255)
T ss_pred             CCCEEEEeCCCch---HHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--------CccceEEEEcCHHHHhhh----
Confidence            3457888887766   3677888889999999999998887777665431        124677888887653211    


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEE
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~  137 (222)
                           ..+.+|+++++.....+.+...+.+.+..-+++.|+-+..
T Consensus       109 -----~~~~fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        109 -----LETPVDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             -----cCCCCCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence                 1246899998877666666667777788888887766544

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.99  E-value=0.027  Score=46.32  Aligned_cols=46  Identities=17%  Similarity=0.238  Sum_probs=39.4

Q ss_pred             EEEecCCCchHHHHHHHHHhCC----CEEEEEeCChhHHHHHHHHHHHhh
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIG----AKVIMACRDVEKAETTASEIRKHF   62 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g----~~v~~~~r~~~~~~~~~~~i~~~~   62 (222)
                      +.|.||+|.+|..++..|+..|    ..|+++|+++++++....+++...
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~   50 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAV   50 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhh
Confidence            3689998889999999999998    699999999988888877776643

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.98  E-value=0.033  Score=40.10  Aligned_cols=98  Identities=10%  Similarity=0.064  Sum_probs=60.0

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC-E-EEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA-K-VIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~-~-v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      ++.|+||||-+|..+++.|.++.. . +.+++++....+.+........        ...++.+..   .+.+.+     
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~~~~---~~~~~~-----   64 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPK--------GFEDLSVED---ADPEEL-----   64 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGT--------TTEEEBEEE---TSGHHH-----
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccc--------cccceeEee---cchhHh-----
Confidence            478999999999999999999765 4 4455555533333332221110        011222221   222211     


Q ss_pred             HHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeCCc
Q psy7936          94 DINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGI  142 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~PG~  142 (222)
                            ...|++|.+.+       ...++.++..+.+.|++|...++-+
T Consensus        65 ------~~~Dvvf~a~~-------~~~~~~~~~~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   65 ------SDVDVVFLALP-------HGASKELAPKLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             ------TTESEEEE-SC-------HHHHHHHHHHHHHTTSEEEESSSTT
T ss_pred             ------hcCCEEEecCc-------hhHHHHHHHHHhhCCcEEEeCCHHH
Confidence                  47899999988       5566777777777889888887765

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=95.98  E-value=0.087  Score=41.00  Aligned_cols=101  Identities=17%  Similarity=0.077  Sum_probs=55.5

Q ss_pred             CCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHHh----
Q psy7936          22 CNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQ----   97 (222)
Q Consensus        22 as~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~~----   97 (222)
                      |.|.+|+.+|..|++.|++|+.++.+++..+.+.+.                +.     .+ .+..+.+++++..+    
T Consensus         7 GlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g----------------~~-----p~-~E~~l~~ll~~~~~~~~l   64 (185)
T PF03721_consen    7 GLGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNG----------------EL-----PI-YEPGLDELLKENVSAGRL   64 (185)
T ss_dssp             --STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTT----------------SS-----SS--CTTHHHHHHHHHHTTSE
T ss_pred             CCCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhc----------------cc-----cc-cccchhhhhccccccccc
Confidence            678899999999999999999999999876554321                00     11 11223333332221    


Q ss_pred             --------hccceeEEEechhhHH-------hhhHHHHHHHHHhhcCCCCeEEE--EEeCCccc
Q psy7936          98 --------TEANVHILINNAVYCI-------LSNNILFYSILFYAIPGKNVNVY--AVHPGIVK  144 (222)
Q Consensus        98 --------~~~~id~li~~ag~~~-------l~~~~~~~~~la~~~~~~gI~v~--~v~PG~v~  144 (222)
                              .....|++|-|.+...       +..+...++.++..+.+..+-|+  +|-||.++
T Consensus        65 ~~t~~~~~ai~~adv~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~  128 (185)
T PF03721_consen   65 RATTDIEEAIKDADVVFICVPTPSDEDGSPDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTE  128 (185)
T ss_dssp             EEESEHHHHHHH-SEEEE----EBETTTSBETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHH
T ss_pred             hhhhhhhhhhhccceEEEecCCCccccCCccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeeh
Confidence                    0113467777766554       44467777777777766444443  46777765

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.96  E-value=0.028  Score=54.53  Aligned_cols=79  Identities=20%  Similarity=0.268  Sum_probs=59.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-E-------------EEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEE
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-K-------------VIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIK   78 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~-------------v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   78 (222)
                      ..|.++|.|+ |.+|...++.|++.+. .             |++++++.+..+++.+..            +  ++..+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~------------~--~~~~v  632 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI------------E--NAEAV  632 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc------------C--CCceE
Confidence            3568999997 8899999999998632 3             888899988777666542            1  34578


Q ss_pred             ecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          79 KLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        79 ~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++|++|.+++.++++       .+|++|++.....
T Consensus       633 ~lDv~D~e~L~~~v~-------~~DaVIsalP~~~  660 (1042)
T PLN02819        633 QLDVSDSESLLKYVS-------QVDVVISLLPASC  660 (1042)
T ss_pred             EeecCCHHHHHHhhc-------CCCEEEECCCchh
Confidence            899999888776654       3699999886543

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=95.95  E-value=0.15  Score=47.81  Aligned_cols=45  Identities=20%  Similarity=0.056  Sum_probs=36.5

Q ss_pred             CEEEEecCCCchHHHHHHHHH-hCCCEEEEEeCChhHHHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLY-GIGAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~-~~g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      +++.|.|+ |-+|..||..++ ..|++|++.+.+++.++...+.+.+
T Consensus       305 ~~v~ViGa-G~mG~~iA~~~a~~~G~~V~l~d~~~~~l~~~~~~~~~  350 (699)
T TIGR02440       305 KKVGILGG-GLMGGGIASVTATKAGIPVRIKDINPQGINNALKYAWK  350 (699)
T ss_pred             cEEEEECC-cHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHH
Confidence            46778887 779999999998 5899999999999877766555533

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=95.94  E-value=0.029  Score=47.66  Aligned_cols=110  Identities=13%  Similarity=0.032  Sum_probs=66.0

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC-------EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA-------KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .+.|+||+|.+|..++..|+..+.       .++++++++..-                      ......+|+.+....
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~----------------------~a~g~~~Dl~d~~~~   58 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK----------------------VLEGVVMELMDCAFP   58 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc----------------------ccceeEeehhcccch
Confidence            378999999999999999998654       499999865420                      112334455444311


Q ss_pred             H--HH--HHHHHhhccceeEEEechhhHH---------hhhHHHHHHHHHhhcC----CCCeEEEEEeCCcccCCc
Q psy7936          89 R--DC--AQDINQTEANVHILINNAVYCI---------LSNNILFYSILFYAIP----GKNVNVYAVHPGIVKTEL  147 (222)
Q Consensus        89 ~--~~--~~~i~~~~~~id~li~~ag~~~---------l~~~~~~~~~la~~~~----~~gI~v~~v~PG~v~T~~  147 (222)
                      .  ..  .....+.....|++|+.||...         +..+..+++.++..+.    +.+|-++.-+|--+-|..
T Consensus        59 ~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v  134 (324)
T TIGR01758        59 LLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALV  134 (324)
T ss_pred             hcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHH
Confidence            1  00  0011233456899999999865         2235666666665543    445666655665444443

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.94  E-value=0.03  Score=49.48  Aligned_cols=73  Identities=21%  Similarity=0.219  Sum_probs=51.9

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      .++|.|+ |.+|..+++.|.+.|+.|++++++.+..+++.+.               ..+.++.+|.++...+.++    
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~---------------~~~~~~~gd~~~~~~l~~~----   61 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR---------------LDVRTVVGNGSSPDVLREA----   61 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh---------------cCEEEEEeCCCCHHHHHHc----
Confidence            5788887 8999999999999999999999999877665431               1345666777776555443    


Q ss_pred             HhhccceeEEEechh
Q psy7936          96 NQTEANVHILINNAV  110 (222)
Q Consensus        96 ~~~~~~id~li~~ag  110 (222)
                        .....|.+|.+..
T Consensus        62 --~~~~a~~vi~~~~   74 (453)
T PRK09496         62 --GAEDADLLIAVTD   74 (453)
T ss_pred             --CCCcCCEEEEecC
Confidence              0124566666544

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.92  E-value=0.028  Score=44.83  Aligned_cols=43  Identities=35%  Similarity=0.468  Sum_probs=37.8

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      ++.|.|++|.+|.+++..|++.|++|++.+|++++.+++.+..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            4789999999999999999999999999999998877766543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.90  E-value=0.051  Score=45.05  Aligned_cols=42  Identities=31%  Similarity=0.468  Sum_probs=36.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      ++++++|+|+++++|.++++.+...|+++++++++.++.+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            567999999999999999999999999999999887765544

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.90  E-value=0.027  Score=41.79  Aligned_cols=44  Identities=27%  Similarity=0.293  Sum_probs=38.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAET   53 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   53 (222)
                      .+++||.++|.|.+.-+|+.++..|.++|++|+++.++...+++
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            57899999999999999999999999999999999876544433

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=95.89  E-value=0.21  Score=47.01  Aligned_cols=45  Identities=13%  Similarity=-0.019  Sum_probs=36.8

Q ss_pred             CEEEEecCCCchHHHHHHHHH-hCCCEEEEEeCChhHHHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLY-GIGAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~-~~g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      +++.|.|| |-+|..||..++ ..|+.|++.+.+.+.++...+.+++
T Consensus       310 ~~v~ViGa-G~mG~giA~~~a~~~G~~V~l~d~~~~~l~~~~~~~~~  355 (708)
T PRK11154        310 NKVGVLGG-GLMGGGIAYVTATKAGLPVRIKDINPQGINHALKYSWD  355 (708)
T ss_pred             cEEEEECC-chhhHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHH
Confidence            46778887 779999999999 8899999999999877766555443

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.87  E-value=0.056  Score=45.24  Aligned_cols=43  Identities=26%  Similarity=0.356  Sum_probs=36.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      .+.+++|.|+++++|.++++.+.+.|++|+.+.++.++.+.+.
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~  187 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV  187 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            5689999999999999999988899999999998887655443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.84  E-value=0.096  Score=42.37  Aligned_cols=81  Identities=19%  Similarity=0.226  Sum_probs=53.2

Q ss_pred             EEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCCCCCeEE
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDKKPGEVL   76 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~   76 (222)
                      ++|.| .||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+++..        |..++.
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~n--------p~v~i~   72 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRN--------PNCKVV   72 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHC--------CCCEEE
Confidence            56776 67899999999999998 888888531                   23344445555543        566777


Q ss_pred             EEecCCCChhhHHHHHHHHHhhccceeEEEechhhH
Q psy7936          77 IKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        77 ~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+..++.+..+..      .+.+..+|++|++....
T Consensus        73 ~~~~~i~~~~~~~------~~f~~~~DvVi~a~Dn~  102 (234)
T cd01484          73 PYQNKVGPEQDFN------DTFFEQFHIIVNALDNI  102 (234)
T ss_pred             EEeccCChhhhch------HHHHhCCCEEEECCCCH
Confidence            8877776533221      12234679999885543

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.84  E-value=0.068  Score=45.43  Aligned_cols=77  Identities=14%  Similarity=0.236  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+++++|+|+ |++|...++-+...|+ +|+++++++++.+.+. ++             +....   .|..+ +++.++
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l-------------Ga~~v---i~~~~-~~~~~~  229 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM-------------GADKL---VNPQN-DDLDHY  229 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc-------------CCcEE---ecCCc-ccHHHH
Confidence            5789999986 8999998877777898 6889999988765433 22             22211   13222 223222


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                          .+..+.+|++|.++|..
T Consensus       230 ----~~~~g~~D~vid~~G~~  246 (343)
T PRK09880        230 ----KAEKGYFDVSFEVSGHP  246 (343)
T ss_pred             ----hccCCCCCEEEECCCCH
Confidence                22235699999999853

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.81  E-value=0.032  Score=46.40  Aligned_cols=39  Identities=21%  Similarity=0.317  Sum_probs=35.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      .+++||.++|+|.+.-+|+.++..|...|++|+++.+..
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            468999999999999999999999999999999988654

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.81  E-value=0.45  Score=39.63  Aligned_cols=45  Identities=22%  Similarity=0.218  Sum_probs=37.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHh
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      ++-|.|+ |-+|..+|..|+..|+.|++.+++++.++...+.+.+.
T Consensus         7 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~   51 (286)
T PRK07819          7 RVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKS   51 (286)
T ss_pred             EEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHH
Confidence            5667777 67999999999999999999999999888766665443

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.81  E-value=0.071  Score=41.12  Aligned_cols=107  Identities=21%  Similarity=0.225  Sum_probs=62.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH------HHHHhhhhhcccCCCCCeEEEEecC
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS------EIRKHFEVATSEDKKPGEVLIKKLD   81 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~------~i~~~~~~~~~~~~~~~~~~~~~~D   81 (222)
                      ....+.|+++.|.|. |.||+++|+.+...|.+|+.++|+........+      .+.+..        ...+++.+.+.
T Consensus        30 ~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell--------~~aDiv~~~~p  100 (178)
T PF02826_consen   30 PGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELL--------AQADIVSLHLP  100 (178)
T ss_dssp             TBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHH--------HH-SEEEE-SS
T ss_pred             CccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhc--------chhhhhhhhhc
Confidence            346689999999987 679999999999999999999998865431111      111111        12366677776


Q ss_pred             CCChhhHHHHHH-HHHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          82 LASFKSIRDCAQ-DINQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        82 ~~~~~~v~~~~~-~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                      ++...  +.+++ +..+. -+-+.++-|.+-..+++-..+.+.|..
T Consensus       101 lt~~T--~~li~~~~l~~-mk~ga~lvN~aRG~~vde~aL~~aL~~  143 (178)
T PF02826_consen  101 LTPET--RGLINAEFLAK-MKPGAVLVNVARGELVDEDALLDALES  143 (178)
T ss_dssp             SSTTT--TTSBSHHHHHT-STTTEEEEESSSGGGB-HHHHHHHHHT
T ss_pred             ccccc--ceeeeeeeeec-cccceEEEeccchhhhhhhHHHHHHhh
Confidence            65421  11111 11111 244556666666777776666666643

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.80  E-value=0.051  Score=47.42  Aligned_cols=48  Identities=31%  Similarity=0.534  Sum_probs=42.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIR   59 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~   59 (222)
                      ++++++++|.||+- +|.-+|++|.++|. +|+++.|+.++.+++.+.+.
T Consensus       175 ~L~~~~vlvIGAGe-m~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGAGE-MGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcccH-HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            47899999999864 99999999999996 99999999999999987763

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=95.77  E-value=0.24  Score=46.65  Aligned_cols=131  Identities=13%  Similarity=0.075  Sum_probs=78.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccC--------------CC-------CC
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED--------------KK-------PG   73 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~--------------~~-------~~   73 (222)
                      +++.|.||. -+|..||..++..|+.|++.+++++.+++..+.+.+..+......              .+       ..
T Consensus       314 ~~v~ViGaG-~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~  392 (714)
T TIGR02437       314 KQAAVLGAG-IMGGGIAYQSASKGTPIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGITPTLSYAGFDN  392 (714)
T ss_pred             ceEEEECCc-hHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeCCHHHhcC
Confidence            456677654 699999999999999999999999887776655543322111000              00       00


Q ss_pred             eEEEEecCCCChhhHHHHHHHHHhhccceeE-EEechhhHHhhh------------------------------------
Q psy7936          74 EVLIKKLDLASFKSIRDCAQDINQTEANVHI-LINNAVYCILSN------------------------------------  116 (222)
Q Consensus        74 ~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~-li~~ag~~~l~~------------------------------------  116 (222)
                      --.++++=+.+.+-=++++.++.... +.|. +-.|.....++.                                    
T Consensus       393 aDlViEav~E~l~~K~~vf~~l~~~~-~~~~ilasnTS~l~i~~ia~~~~~p~r~ig~Hff~P~~~~~lvEvv~g~~Ts~  471 (714)
T TIGR02437       393 VDIVVEAVVENPKVKAAVLAEVEQHV-REDAILASNTSTISISLLAKALKRPENFCGMHFFNPVHRMPLVEVIRGEKSSD  471 (714)
T ss_pred             CCEEEEcCcccHHHHHHHHHHHHhhC-CCCcEEEECCCCCCHHHHHhhcCCcccEEEEecCCCcccCceEeecCCCCCCH
Confidence            01233333444444455666665443 4443 444443333111                                    


Q ss_pred             -HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcC
Q psy7936         117 -NILFYSILFYAIPGKNVNVYAVHPGIVKTELG  148 (222)
Q Consensus       117 -~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~  148 (222)
                       ....+..+...+++.-|.|+ -+||++-..+.
T Consensus       472 ~~~~~~~~~~~~lgk~pv~v~-d~pGfi~NRl~  503 (714)
T TIGR02437       472 ETIATVVAYASKMGKTPIVVN-DCPGFFVNRVL  503 (714)
T ss_pred             HHHHHHHHHHHHcCCEEEEeC-CcccchHHHHH
Confidence             45555667777888778886 67999866654

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.75  E-value=0.1  Score=42.41  Aligned_cols=86  Identities=17%  Similarity=0.193  Sum_probs=57.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDK   70 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~   70 (222)
                      .+.+++++|.|+ ||+|..+++.|+..|. +++++|.+.                   .+.+.+.+.+++..        
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~in--------   91 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQIN--------   91 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHC--------
Confidence            356778888876 5799999999999998 888887632                   23444555666554        


Q ss_pred             CCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        71 ~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      |..++..+...+.. +.+.+++       ...|++|.+.....
T Consensus        92 p~v~i~~~~~~i~~-~~~~~~~-------~~~DlVvd~~D~~~  126 (240)
T TIGR02355        92 PHIAINPINAKLDD-AELAALI-------AEHDIVVDCTDNVE  126 (240)
T ss_pred             CCcEEEEEeccCCH-HHHHHHh-------hcCCEEEEcCCCHH
Confidence            55566666555543 2333332       35699998876544

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.74  E-value=0.056  Score=38.23  Aligned_cols=71  Identities=24%  Similarity=0.265  Sum_probs=51.7

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDIN   96 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~   96 (222)
                      ++|.|.+ .+|+.+++.|.+.+.+|++++++++..+++.+.              +  +.++.+|.++.+.++++  .+ 
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~--------------~--~~~i~gd~~~~~~l~~a--~i-   60 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREE--------------G--VEVIYGDATDPEVLERA--GI-   60 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT--------------T--SEEEES-TTSHHHHHHT--TG-
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc--------------c--cccccccchhhhHHhhc--Cc-
Confidence            4677775 699999999999777999999999886655422              2  55888999999888875  22 


Q ss_pred             hhccceeEEEechh
Q psy7936          97 QTEANVHILINNAV  110 (222)
Q Consensus        97 ~~~~~id~li~~ag  110 (222)
                         ...+.+|....
T Consensus        61 ---~~a~~vv~~~~   71 (116)
T PF02254_consen   61 ---EKADAVVILTD   71 (116)
T ss_dssp             ---GCESEEEEESS
T ss_pred             ---cccCEEEEccC
Confidence               25677776654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.72  E-value=0.044  Score=43.29  Aligned_cols=38  Identities=26%  Similarity=0.392  Sum_probs=33.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      .+++||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            5689999999999 6799999999999999999998653

>PRK08223 hypothetical protein; Validated

Probab=95.72  E-value=0.085  Score=43.89  Aligned_cols=82  Identities=24%  Similarity=0.276  Sum_probs=56.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      |.+.+++|.|+. |+|..++..|+..|. ++.++|.+.                   .+.+.+.+.+++.+        |
T Consensus        25 L~~s~VlIvG~G-GLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iN--------P   95 (287)
T PRK08223         25 LRNSRVAIAGLG-GVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDIN--------P   95 (287)
T ss_pred             HhcCCEEEECCC-HHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHC--------C
Confidence            567788888875 799999999999998 898887531                   23445556666554        5


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechh
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAV  110 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag  110 (222)
                      ..++..+...++. +.+.++++       ..|++|.+.-
T Consensus        96 ~v~V~~~~~~l~~-~n~~~ll~-------~~DlVvD~~D  126 (287)
T PRK08223         96 ELEIRAFPEGIGK-ENADAFLD-------GVDVYVDGLD  126 (287)
T ss_pred             CCEEEEEecccCc-cCHHHHHh-------CCCEEEECCC
Confidence            6677777777764 33444433       4699887654

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.71  E-value=0.1  Score=44.43  Aligned_cols=104  Identities=13%  Similarity=0.191  Sum_probs=66.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH-----HHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA-----SEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      ..+.||++.|.|. |.||+.+|+.|...|.+|++++|+........     ..+....        ...+++.+.+-++.
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell--------~~aDiV~l~lP~t~  216 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELL--------RESDFVSLHVPLTK  216 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHH--------hhCCEEEEeCCCCh
Confidence            4689999999998 77999999999999999999998754321100     0111111        24467777776654


Q ss_pred             hhhHHHHHH-HHHhhccceeEEEechhhHHhhhHHHHHHHHH
Q psy7936          85 FKSIRDCAQ-DINQTEANVHILINNAVYCILSNNILFYSILF  125 (222)
Q Consensus        85 ~~~v~~~~~-~i~~~~~~id~li~~ag~~~l~~~~~~~~~la  125 (222)
                        +.+.++. +..+. -+.+.++.|.+-..+++-..+.+.|.
T Consensus       217 --~T~~~i~~~~~~~-mk~ga~lIN~aRg~~vd~~aL~~aL~  255 (333)
T PRK13243        217 --ETYHMINEERLKL-MKPTAILVNTARGKVVDTKALVKALK  255 (333)
T ss_pred             --HHhhccCHHHHhc-CCCCeEEEECcCchhcCHHHHHHHHH
Confidence              3333432 22222 25567777777777777666666664

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.70  E-value=0.16  Score=43.28  Aligned_cols=104  Identities=15%  Similarity=0.129  Sum_probs=69.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH---HHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS---EIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ..+.|+++.|.|. |.||+++|+.|...|.+|++++|+.........   .+....        ...+++.+.+..+.. 
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell--------~~aDiVil~lP~t~~-  211 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAI--------KDADIISLHVPANKE-  211 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHH--------hcCCEEEEeCCCcHH-
Confidence            4578999999987 559999999999999999999998754322111   122111        245677777776642 


Q ss_pred             hHHHHH-HHHHhhccceeEEEechhhHHhhhHHHHHHHHH
Q psy7936          87 SIRDCA-QDINQTEANVHILINNAVYCILSNNILFYSILF  125 (222)
Q Consensus        87 ~v~~~~-~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la  125 (222)
                       .+.++ +..... -+.+.++-|++-..+++-..+.+.|.
T Consensus       212 -t~~li~~~~l~~-mk~gavlIN~aRG~~vd~~aL~~aL~  249 (330)
T PRK12480        212 -SYHLFDKAMFDH-VKKGAILVNAARGAVINTPDLIAAVN  249 (330)
T ss_pred             -HHHHHhHHHHhc-CCCCcEEEEcCCccccCHHHHHHHHH
Confidence             23333 233322 35577888888888888777777764

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.65  E-value=0.028  Score=47.02  Aligned_cols=43  Identities=23%  Similarity=0.305  Sum_probs=37.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE   52 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~   52 (222)
                      .++.||.+.|.|.++-+|+.+|..|.++|++|+++.|....++
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~  197 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK  197 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            4689999999999999999999999999999999977655433

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.64  E-value=0.1  Score=41.28  Aligned_cols=96  Identities=17%  Similarity=0.214  Sum_probs=60.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh-HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +.+++||.++|.|+.. +|..-++.|++.|++|++++.+.. .+.++    ..           .+++.++.-+... ..
T Consensus         4 ~l~l~gk~vlVvGgG~-va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l----~~-----------~~~i~~~~~~~~~-~d   66 (205)
T TIGR01470         4 FANLEGRAVLVVGGGD-VALRKARLLLKAGAQLRVIAEELESELTLL----AE-----------QGGITWLARCFDA-DI   66 (205)
T ss_pred             EEEcCCCeEEEECcCH-HHHHHHHHHHHCCCEEEEEcCCCCHHHHHH----HH-----------cCCEEEEeCCCCH-HH
Confidence            4568999999999865 889999999999999999987553 22222    11           2366676666552 11


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEE
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v  138 (222)
                             +    ...+.+|.+.+...+      -..+..+..+.||-||++
T Consensus        67 -------l----~~~~lVi~at~d~~l------n~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        67 -------L----EGAFLVIAATDDEEL------NRRVAHAARARGVPVNVV  100 (205)
T ss_pred             -------h----CCcEEEEECCCCHHH------HHHHHHHHHHcCCEEEEC
Confidence                   1    245777777665432      122333333456777653

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.62  E-value=0.026  Score=38.56  Aligned_cols=37  Identities=32%  Similarity=0.399  Sum_probs=32.4

Q ss_pred             CCCchHHHHHHHHHhCC---CEEEEE-eCChhHHHHHHHHH
Q psy7936          22 CNTGIGKVTAQTLYGIG---AKVIMA-CRDVEKAETTASEI   58 (222)
Q Consensus        22 as~giG~~~a~~l~~~g---~~v~~~-~r~~~~~~~~~~~i   58 (222)
                      |+|.+|.++++.|.+.|   .+|++. .|++++.+++.++.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            67889999999999999   799955 99999998887664

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=95.62  E-value=0.2  Score=47.32  Aligned_cols=46  Identities=20%  Similarity=0.189  Sum_probs=38.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      +++.|.|| |-+|..||..++..|+.|++.+++++.++...+.+.+.
T Consensus       336 ~~v~ViGa-G~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~  381 (737)
T TIGR02441       336 KTLAVLGA-GLMGAGIAQVSVDKGLKTVLKDATPAGLDRGQQQVFKG  381 (737)
T ss_pred             cEEEEECC-CHhHHHHHHHHHhCCCcEEEecCCHHHHHHHHHHHHHH
Confidence            46778887 67999999999999999999999999887766665443

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>PRK14968 putative methyltransferase; Provisional

Probab=95.59  E-value=0.35  Score=37.04  Aligned_cols=103  Identities=16%  Similarity=0.090  Sum_probs=65.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .++++|-.|+..|.   ++..++..+.+|+.++++++.++...+.+....-       .+..+.++.+|+.+.       
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-------~~~~~~~~~~d~~~~-------   85 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNI-------RNNGVEVIRSDLFEP-------   85 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCC-------CCcceEEEecccccc-------
Confidence            56789988888666   4555555588999999999887777666654310       011277888887442       


Q ss_pred             HHHHhhccceeEEEechhhHH---------------------hhhHHHHHHHHHhhcCCCCeEEE
Q psy7936          93 QDINQTEANVHILINNAVYCI---------------------LSNNILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~---------------------l~~~~~~~~~la~~~~~~gI~v~  136 (222)
                        ..+  ..+|.++.|..+..                     ......+.+.+..-+++.|.-+.
T Consensus        86 --~~~--~~~d~vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~gG~~~~  146 (188)
T PRK14968         86 --FRG--DKFDVILFNPPYLPTEEEEEWDDWLNYALSGGKDGREVIDRFLDEVGRYLKPGGRILL  146 (188)
T ss_pred             --ccc--cCceEEEECCCcCCCCchhhhhhhhhhhhccCcChHHHHHHHHHHHHHhcCCCeEEEE
Confidence              111  26899998876433                     01134456666677777675443

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.54  E-value=0.12  Score=44.80  Aligned_cols=86  Identities=19%  Similarity=0.266  Sum_probs=58.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDK   70 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~   70 (222)
                      .+.+.+++|.|+ ||+|..+++.|+..|. ++++++.+                   ..+.+.+.+.+.+..        
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~n--------  108 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQ--------  108 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHC--------
Confidence            356778888887 5799999999999997 99998864                   224555556666553        


Q ss_pred             CCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        71 ~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      |..++..+...++. +.+.+++       ...|++|.+.-...
T Consensus       109 p~v~i~~~~~~i~~-~~~~~~~-------~~~DlVid~~Dn~~  143 (370)
T PRK05600        109 PDIRVNALRERLTA-ENAVELL-------NGVDLVLDGSDSFA  143 (370)
T ss_pred             CCCeeEEeeeecCH-HHHHHHH-------hCCCEEEECCCCHH
Confidence            45567776666653 3333333       24699998876543

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.47  E-value=0.12  Score=42.77  Aligned_cols=90  Identities=16%  Similarity=0.042  Sum_probs=57.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHh-CCCEEEEEeC-------Ch-----hHHHHHHHHHHHhhhhhcccCCCCCeEEEEec
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYG-IGAKVIMACR-------DV-----EKAETTASEIRKHFEVATSEDKKPGEVLIKKL   80 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~-~g~~v~~~~r-------~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (222)
                      .|.+||.|+++|.|++.-...+- .|++-+.+.-       ++     -+...+.+..++          .+--..-+..
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~----------kGlyAksing  110 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQ----------KGLYAKSING  110 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHh----------cCceeeeccc
Confidence            36899999999999884443332 4565555431       11     112222222222          2445566777


Q ss_pred             CCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          81 DLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        81 D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      |.-+.+--+..++.|++.++.+|.+|++-+...
T Consensus       111 DaFS~e~k~kvIe~Ik~~~g~vDlvvYSlAsp~  143 (398)
T COG3007         111 DAFSDEMKQKVIEAIKQDFGKVDLVVYSLASPR  143 (398)
T ss_pred             chhhHHHHHHHHHHHHHhhccccEEEEeccCcc
Confidence            877767777889999999999999999876544

>KOG1431|consensus

Probab=95.47  E-value=0.047  Score=43.73  Aligned_cols=63  Identities=17%  Similarity=0.202  Sum_probs=46.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC---EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA---KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ++++|||++|=+|.+|.+.+..+|.   +.++.+                               .-.+|+++.++.+.+
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~-------------------------------skd~DLt~~a~t~~l   50 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG-------------------------------SKDADLTNLADTRAL   50 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEec-------------------------------cccccccchHHHHHH
Confidence            6899999999999999999998875   233322                               124688888888888


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++..     ++-.+||.|+..+
T Consensus        51 F~~e-----kPthVIhlAAmVG   67 (315)
T KOG1431|consen   51 FESE-----KPTHVIHLAAMVG   67 (315)
T ss_pred             Hhcc-----CCceeeehHhhhc
Confidence            7765     4566666665544

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.43  E-value=0.14  Score=43.61  Aligned_cols=43  Identities=35%  Similarity=0.507  Sum_probs=34.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      .|+.++|+|+. |+|--.++.....|++|+.++|++++.+...+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~  208 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK  208 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH
Confidence            58899999999 99955554444489999999999998765543

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.41  E-value=0.52  Score=39.18  Aligned_cols=43  Identities=23%  Similarity=0.154  Sum_probs=36.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      +++.|.|+ |-+|.++|..|+..|++|++++++++.+++..+.+
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~   46 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERI   46 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH
Confidence            35677776 77999999999999999999999998877766554

>PRK08328 hypothetical protein; Provisional

Probab=95.39  E-value=0.18  Score=40.61  Aligned_cols=35  Identities=23%  Similarity=0.437  Sum_probs=29.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD   47 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~   47 (222)
                      +.+++++|.|+. |+|.++++.|+..|. +++++|.+
T Consensus        25 L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         25 LKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             HhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCC
Confidence            466788888875 799999999999998 89998854

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.37  E-value=0.099  Score=46.17  Aligned_cols=96  Identities=25%  Similarity=0.196  Sum_probs=64.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ...+.++|.|+ |.+|..+++.|.+.|++|++++++++..+++.+..              ..+.++..|.++.+.++++
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~--------------~~~~~i~gd~~~~~~L~~~  293 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL--------------PNTLVLHGDGTDQELLEEE  293 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC--------------CCCeEEECCCCCHHHHHhc
Confidence            35678999999 78999999999999999999999998776655431              2345778899988776553


Q ss_pred             HHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCC
Q psy7936          92 AQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGK  131 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~  131 (222)
                            .....|.+|....-- ..|  .++..+++++...
T Consensus       294 ------~~~~a~~vi~~~~~~-~~n--~~~~~~~~~~~~~  324 (453)
T PRK09496        294 ------GIDEADAFIALTNDD-EAN--ILSSLLAKRLGAK  324 (453)
T ss_pred             ------CCccCCEEEECCCCc-HHH--HHHHHHHHHhCCC
Confidence                  112456666554422 222  2233355555443

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.37  E-value=0.034  Score=42.23  Aligned_cols=45  Identities=27%  Similarity=0.396  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .++.||+++|.|.+.-+|+.++..|.++|++|.++......+++.
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~   76 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI   76 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce
Confidence            468999999999999999999999999999999988766555443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.35  E-value=0.017  Score=40.43  Aligned_cols=38  Identities=29%  Similarity=0.440  Sum_probs=32.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      .+++||.++|.|+ |.+|..=++.|.+.|++|++++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            5689999999999 7799999999999999999999886

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=95.35  E-value=0.22  Score=44.83  Aligned_cols=43  Identities=19%  Similarity=0.147  Sum_probs=36.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      ..+.+++|.|+ |.+|...+..+...|+.|++++++.++++...
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~  204 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ  204 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            45678999996 78999999999999999999999998755443

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK14851 hypothetical protein; Provisional

Probab=95.32  E-value=0.14  Score=47.73  Aligned_cols=83  Identities=18%  Similarity=0.171  Sum_probs=58.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDK   70 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~   70 (222)
                      .+.+++++|.| .||+|..++..|+..|. +++++|.+                   ..+.+.+.+.+.+..        
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~in--------  110 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSIN--------  110 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhC--------
Confidence            35678899998 56899999999999998 88888742                   123444455555554        


Q ss_pred             CCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechh
Q psy7936          71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAV  110 (222)
Q Consensus        71 ~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag  110 (222)
                      |..++..+...++. +++..+++       .+|++|.+.-
T Consensus       111 P~~~I~~~~~~i~~-~n~~~~l~-------~~DvVid~~D  142 (679)
T PRK14851        111 PFLEITPFPAGINA-DNMDAFLD-------GVDVVLDGLD  142 (679)
T ss_pred             CCCeEEEEecCCCh-HHHHHHHh-------CCCEEEECCC
Confidence            56688888887763 44554443       4688887764

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.30  E-value=0.42  Score=40.59  Aligned_cols=44  Identities=16%  Similarity=0.082  Sum_probs=35.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR   59 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~   59 (222)
                      +++.|.|+ |-||..+|..|+..|++|++.+++++..+...+.+.
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~   51 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVA   51 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHH
Confidence            45667776 669999999999999999999999887766555443

>PLN02602 lactate dehydrogenase

Probab=95.29  E-value=0.23  Score=42.62  Aligned_cols=113  Identities=15%  Similarity=0.166  Sum_probs=71.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +++.|+|+ |.+|..+|..|+..+.  .+++++.+++.++....++.....     . .+ ...+.. . .+.++     
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~-----~-~~-~~~i~~-~-~dy~~-----  102 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAA-----F-LP-RTKILA-S-TDYAV-----  102 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhh-----c-CC-CCEEEe-C-CCHHH-----
Confidence            58999996 8899999999998875  799999999887777777765420     0 01 111111 0 11111     


Q ss_pred             HHHHhhccceeEEEechhhHH---------hhhHHHHHHHHHhh---cCCCCeEEEEEeCCcccCCcC
Q psy7936          93 QDINQTEANVHILINNAVYCI---------LSNNILFYSILFYA---IPGKNVNVYAVHPGIVKTELG  148 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~---------l~~~~~~~~~la~~---~~~~gI~v~~v~PG~v~T~~~  148 (222)
                            ...-|++|..||...         +..+..+.+.++..   ..++++.++.-+|--+-|...
T Consensus       103 ------~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvdv~t~~~  164 (350)
T PLN02602        103 ------TAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVDVLTYVA  164 (350)
T ss_pred             ------hCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH
Confidence                  134599999999864         11244444444443   345677777778876655544

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.27  E-value=0.052  Score=45.16  Aligned_cols=40  Identities=25%  Similarity=0.341  Sum_probs=35.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      ..+++||.++|.|+++-.|+.++..|.+.|++|+++.|..
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t  193 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT  193 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            3568999999999999899999999999999999988743

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.27  E-value=0.11  Score=42.90  Aligned_cols=42  Identities=33%  Similarity=0.511  Sum_probs=36.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .+.+++|+|+++++|.+++..+...|+.|+.++++.+..+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999887765443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=95.24  E-value=0.67  Score=41.83  Aligned_cols=45  Identities=22%  Similarity=0.244  Sum_probs=37.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      +++.|.|+ |-+|..||..|++.|+.|++++++++.++...+.+++
T Consensus         6 ~kV~VIGa-G~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~   50 (503)
T TIGR02279         6 VTVAVIGA-GAMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEA   50 (503)
T ss_pred             cEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHH
Confidence            35778887 6799999999999999999999999988776555443

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=95.24  E-value=0.38  Score=33.40  Aligned_cols=103  Identities=17%  Similarity=0.111  Sum_probs=66.7

Q ss_pred             CCEEEEecCCCch-HHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGI-GKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~gi-G~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++++|-.|+..|. ...+++  ...+++|+.++.+++.++...+.+....        ...++.+++.|+ .. .     
T Consensus         2 ~~~vLDlGcG~G~~~~~l~~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~--------~~~~i~~~~~d~-~~-~-----   64 (112)
T PF12847_consen    2 GGRVLDLGCGTGRLSIALAR--LFPGARVVGVDISPEMLEIARERAAEEG--------LSDRITFVQGDA-EF-D-----   64 (112)
T ss_dssp             TCEEEEETTTTSHHHHHHHH--HHTTSEEEEEESSHHHHHHHHHHHHHTT--------TTTTEEEEESCC-HG-G-----
T ss_pred             CCEEEEEcCcCCHHHHHHHh--cCCCCEEEEEeCCHHHHHHHHHHHHhcC--------CCCCeEEEECcc-cc-C-----
Confidence            5678888887543 444444  2367899999999999888887774432        467899999998 11 1     


Q ss_pred             HHHHhhccceeEEEech-hhHHhh---hHHHHHHHHHhhcCCCCeEEE
Q psy7936          93 QDINQTEANVHILINNA-VYCILS---NNILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        93 ~~i~~~~~~id~li~~a-g~~~l~---~~~~~~~~la~~~~~~gI~v~  136 (222)
                         .....++|+++.+. ....+.   ....+.+.+...+++.|+-+.
T Consensus        65 ---~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   65 ---PDFLEPFDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             ---TTTSSCEEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ---cccCCCCCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence               12224689999887 222222   245556667777776665444

...

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.24  E-value=0.071  Score=40.36  Aligned_cols=36  Identities=31%  Similarity=0.312  Sum_probs=32.0

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC   45 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~   45 (222)
                      +.+++||.++|.||.. +|...++.|.+.|++|++++
T Consensus         8 ~l~l~~~~vlVvGGG~-va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719          8 MFNLHNKVVVIIGGGK-IAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             EEEcCCCEEEEECCCH-HHHHHHHHHHhCCCEEEEEc
Confidence            3678999999999865 99999999999999999885

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=95.23  E-value=0.21  Score=45.03  Aligned_cols=43  Identities=21%  Similarity=0.162  Sum_probs=36.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      ..+.+++|+|+. .+|+..+..+...|++|+++++++++++...
T Consensus       163 ~pg~kVlViGaG-~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae  205 (509)
T PRK09424        163 VPPAKVLVIGAG-VAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE  205 (509)
T ss_pred             cCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            467899999975 5999999999999999999999998876554

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.22  E-value=0.13  Score=42.86  Aligned_cols=42  Identities=26%  Similarity=0.375  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .+..++|+|+++++|.++++.+...|++|+.++++.++.+.+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~  183 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV  183 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            467899999999999999888888999999999888865443

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.16  E-value=0.074  Score=44.58  Aligned_cols=42  Identities=26%  Similarity=0.428  Sum_probs=36.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE   52 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~   52 (222)
                      .++.+++++|.|. |++|+.++..|...|++|++++|+.+..+
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            4567999999997 67999999999999999999999976543

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.16  E-value=0.21  Score=42.95  Aligned_cols=79  Identities=20%  Similarity=0.192  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC-hhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS-FKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~   90 (222)
                      .|.+++|+|+ +++|...++..-..|+ +|+.++++.++.+.+. .+             +....   .|..+ ..++.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~-------------Ga~~~---i~~~~~~~~~~~  246 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KL-------------GATDC---VNPNDYDKPIQE  246 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-------------CCCeE---EcccccchhHHH
Confidence            4789999986 8999998887777898 7999999888765442 22             22111   13222 123333


Q ss_pred             HHHHHHhhccceeEEEechhh
Q psy7936          91 CAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~  111 (222)
                      .+.++..  +.+|++|.++|.
T Consensus       247 ~v~~~~~--~g~d~vid~~G~  265 (368)
T TIGR02818       247 VIVEITD--GGVDYSFECIGN  265 (368)
T ss_pred             HHHHHhC--CCCCEEEECCCC
Confidence            3333332  368999999885

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.16  E-value=0.11  Score=43.34  Aligned_cols=43  Identities=21%  Similarity=0.217  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      .|.+++|.|+++++|.++++.....|++++++.++.+..+.+.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~  181 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR  181 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH
Confidence            5779999999999999999988888999999988887655443

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PLN02928 oxidoreductase family protein

Probab=95.14  E-value=0.14  Score=43.92  Aligned_cols=104  Identities=20%  Similarity=0.186  Sum_probs=62.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH------------------HHHHHHhhhhhcccCCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT------------------ASEIRKHFEVATSEDKK   71 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~------------------~~~i~~~~~~~~~~~~~   71 (222)
                      ..+.||++.|.|. |.||+.+|+.|...|.+|+.++|+.......                  ...+.+..        .
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell--------~  225 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFA--------G  225 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHH--------h
Confidence            3588999999998 6799999999999999999999873211100                  00011110        1


Q ss_pred             CCeEEEEecCCCChhhHHHHHHH-HHhhccceeEEEechhhHHhhhHHHHHHHHH
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQD-INQTEANVHILINNAVYCILSNNILFYSILF  125 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~-i~~~~~~id~li~~ag~~~l~~~~~~~~~la  125 (222)
                      ..+++.+.+-++.  +-+.+++. .... -+...++-|.|-..+++-..+.++|.
T Consensus       226 ~aDiVvl~lPlt~--~T~~li~~~~l~~-Mk~ga~lINvaRG~lVde~AL~~AL~  277 (347)
T PLN02928        226 EADIVVLCCTLTK--ETAGIVNDEFLSS-MKKGALLVNIARGGLLDYDAVLAALE  277 (347)
T ss_pred             hCCEEEECCCCCh--HhhcccCHHHHhc-CCCCeEEEECCCccccCHHHHHHHHH
Confidence            3356666665553  22333321 1111 24466666666666666666666664

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.11  E-value=0.21  Score=42.51  Aligned_cols=41  Identities=37%  Similarity=0.485  Sum_probs=35.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .|.+++|.|+ +++|..+++.....|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4789999999 9999998888888899999999998876544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.10  E-value=0.21  Score=41.83  Aligned_cols=42  Identities=36%  Similarity=0.480  Sum_probs=35.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .+..++|.|+++++|.++++.....|++|+.+.++.++.+.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL  180 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence            577899999999999998888888899999999888765544

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.09  E-value=0.24  Score=41.42  Aligned_cols=76  Identities=17%  Similarity=0.133  Sum_probs=52.0

Q ss_pred             EEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCCCCCeEE
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDKKPGEVL   76 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   76 (222)
                      ++|.| .||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++..        |..++.
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~n--------p~v~I~   72 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRV--------PGVNVT   72 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHC--------CCCEEE
Confidence            66777 56899999999999998 88888742                   123444555565554        566788


Q ss_pred             EEecCCCChhhHHHHHHHHHhhccceeEEEechh
Q psy7936          77 IKKLDLASFKSIRDCAQDINQTEANVHILINNAV  110 (222)
Q Consensus        77 ~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag  110 (222)
                      .+..++.+..  .       +.+..+|++|.+..
T Consensus        73 ~~~~~i~~~~--~-------~f~~~fdvVi~alD   97 (291)
T cd01488          73 PHFGKIQDKD--E-------EFYRQFNIIICGLD   97 (291)
T ss_pred             EEecccCchh--H-------HHhcCCCEEEECCC
Confidence            8877777531  1       22346799998754

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.09  E-value=0.086  Score=43.80  Aligned_cols=40  Identities=28%  Similarity=0.370  Sum_probs=35.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      .++.||.++|.|.+.-+|+.+|..|.++|++|+++.....
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~  192 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK  192 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH
Confidence            5689999999999999999999999999999998865443

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.09  E-value=0.11  Score=43.78  Aligned_cols=41  Identities=24%  Similarity=0.280  Sum_probs=34.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCE-EEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAK-VIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~   54 (222)
                      .|.+++|+|+ +++|..+++.+...|++ |+++++++++.+.+
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~  204 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA  204 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            4789999986 89999998888888997 99999888876543

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.08  E-value=0.21  Score=41.38  Aligned_cols=42  Identities=26%  Similarity=0.417  Sum_probs=35.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .|.+++|.|+++++|.++++..-..|++|+.+.+++++.+.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999888888899999999888764433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.06  E-value=0.78  Score=36.50  Aligned_cols=117  Identities=15%  Similarity=0.110  Sum_probs=73.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhh---cccCCCCCeEEEEecCCCChhhHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVA---TSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+.++|+.|+..|   .-+..|+++|++|+.++.++..++.+.++........   ......+.++.++++|+.+...  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            5668999999875   4567788999999999999998886533211100000   0000024578889999987642  


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhhh--HHHHHHHHHhhcCCCC-eEEEEEeCC
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILSN--NILFYSILFYAIPGKN-VNVYAVHPG  141 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~~--~~~~~~~la~~~~~~g-I~v~~v~PG  141 (222)
                             ...+.+|.++-.+....+..  ...+.+.+..-+++.| +-+.+..+.
T Consensus       109 -------~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~~~  156 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLDYD  156 (213)
T ss_pred             -------ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEEcC
Confidence                   11245677776655443322  4567778888888877 456666553

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=95.06  E-value=0.64  Score=43.86  Aligned_cols=45  Identities=22%  Similarity=0.185  Sum_probs=36.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      +++.|.||. -+|..||..++..|++|++.+++++.++...+.+.+
T Consensus       314 ~~v~ViGaG-~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~  358 (715)
T PRK11730        314 KQAAVLGAG-IMGGGIAYQSASKGVPVIMKDINQKALDLGMTEAAK  358 (715)
T ss_pred             ceEEEECCc-hhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHH
Confidence            457777765 599999999999999999999999887765555433

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.04  E-value=0.081  Score=45.11  Aligned_cols=92  Identities=16%  Similarity=0.142  Sum_probs=56.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC---EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA---KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .++.|.||||.+|+++++.|.++++   ++..+.+.....+.+.  +            .+..+.+  .|+.+.      
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~------------~g~~i~v--~d~~~~------   59 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--F------------KGKELKV--EDLTTF------   59 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--e------------CCceeEE--eeCCHH------
Confidence            4689999999999999999999765   4566665544332221  0            1222222  244321      


Q ss_pred             HHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeCC
Q psy7936          92 AQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPG  141 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~PG  141 (222)
                        .+    ..+|++|.++|       ...++.++..+.+.|..|...+..
T Consensus        60 --~~----~~vDvVf~A~g-------~g~s~~~~~~~~~~G~~VIDlS~~   96 (334)
T PRK14874         60 --DF----SGVDIALFSAG-------GSVSKKYAPKAAAAGAVVIDNSSA   96 (334)
T ss_pred             --HH----cCCCEEEECCC-------hHHHHHHHHHHHhCCCEEEECCch
Confidence              11    25899999998       444555555555556666655543

>PRK07877 hypothetical protein; Provisional

Probab=95.02  E-value=0.15  Score=47.87  Aligned_cols=84  Identities=19%  Similarity=0.148  Sum_probs=61.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCC------------------hhHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRD------------------VEKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~------------------~~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      +.+++++|.|+  |+|..++..|+..|.  +++++|..                  ..+.+.+++.|.+.+        |
T Consensus       105 L~~~~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~in--------p  174 (722)
T PRK07877        105 LGRLRIGVVGL--SVGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELD--------P  174 (722)
T ss_pred             HhcCCEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHC--------C
Confidence            57789999999  499999999999993  89998853                  123444555565554        5


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ..++..+...++ .+++..+++       .+|++|.|.-...
T Consensus       175 ~i~v~~~~~~i~-~~n~~~~l~-------~~DlVvD~~D~~~  208 (722)
T PRK07877        175 YLPVEVFTDGLT-EDNVDAFLD-------GLDVVVEECDSLD  208 (722)
T ss_pred             CCEEEEEeccCC-HHHHHHHhc-------CCCEEEECCCCHH
Confidence            678888888887 456665543       4699999876443

>KOG4039|consensus

Probab=94.98  E-value=0.028  Score=43.23  Aligned_cols=80  Identities=13%  Similarity=0.057  Sum_probs=58.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +.|.++.++|.|||+-.|..+.+.+.+.+.  +|+++.|.+..-.+                 ....+.....|++.+++
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a-----------------t~k~v~q~~vDf~Kl~~   76 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA-----------------TDKVVAQVEVDFSKLSQ   76 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc-----------------ccceeeeEEechHHHHH
Confidence            557788999999999999999999999985  89999987521100                 13355666677765544


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ..       +....+|+++|+-|...
T Consensus        77 ~a-------~~~qg~dV~FcaLgTTR   95 (238)
T KOG4039|consen   77 LA-------TNEQGPDVLFCALGTTR   95 (238)
T ss_pred             HH-------hhhcCCceEEEeecccc
Confidence            33       33357899999987655

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.95  E-value=0.14  Score=42.06  Aligned_cols=42  Identities=33%  Similarity=0.446  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .+.+++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999988888899999998888765443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.94  E-value=0.24  Score=42.48  Aligned_cols=79  Identities=18%  Similarity=0.197  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh-hhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF-KSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~   90 (222)
                      .|.+++|.|+ +++|...++.+-..|+ +|+.++++.++.+.+. .+             +.+..   .|..+. +++.+
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~-~l-------------Ga~~~---i~~~~~~~~~~~  247 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK-KF-------------GATDC---VNPKDHDKPIQQ  247 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hc-------------CCCEE---EcccccchHHHH
Confidence            4789999985 8999999888888899 7999999988765442 22             22211   233322 23444


Q ss_pred             HHHHHHhhccceeEEEechhh
Q psy7936          91 CAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~  111 (222)
                      .+.++..  +.+|++|.+.|.
T Consensus       248 ~v~~~~~--~g~d~vid~~g~  266 (368)
T cd08300         248 VLVEMTD--GGVDYTFECIGN  266 (368)
T ss_pred             HHHHHhC--CCCcEEEECCCC
Confidence            4444433  369999999885

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.93  E-value=0.088  Score=43.81  Aligned_cols=43  Identities=19%  Similarity=0.265  Sum_probs=37.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      +++.|.|+ |-+|..+|..|++.|++|++++++++.++++.+.+
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~   44 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEI   44 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHH
Confidence            36778888 67999999999999999999999999888776544

>PLN02740 Alcohol dehydrogenase-like

Probab=94.82  E-value=0.22  Score=43.00  Aligned_cols=80  Identities=21%  Similarity=0.194  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh-hhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF-KSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~   90 (222)
                      .|.+++|.|+ +++|...++.+-..|+ +|+++++++++++.+. .+             +... ++  |..+. .++.+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~-------------Ga~~-~i--~~~~~~~~~~~  259 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM-------------GITD-FI--NPKDSDKPVHE  259 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc-------------CCcE-EE--ecccccchHHH
Confidence            5789999986 8999998888878898 6999999888765543 22             2221 11  33222 12333


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+..+..  +.+|++|.++|..
T Consensus       260 ~v~~~~~--~g~dvvid~~G~~  279 (381)
T PLN02740        260 RIREMTG--GGVDYSFECAGNV  279 (381)
T ss_pred             HHHHHhC--CCCCEEEECCCCh
Confidence            3333322  2699999999954

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=94.81  E-value=0.091  Score=42.29  Aligned_cols=36  Identities=33%  Similarity=0.414  Sum_probs=30.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEE-EEeC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVI-MACR   46 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~-~~~r   46 (222)
                      .++.+++++|.| .|.+|+.+++.|.+.|++|+ +.+.
T Consensus        27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076          27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence            457899999997 68999999999999999888 5555

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.81  E-value=0.073  Score=44.55  Aligned_cols=39  Identities=31%  Similarity=0.400  Sum_probs=35.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe-CCh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDV   48 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~-r~~   48 (222)
                      .++.||+++|.|-++-+|+.+|..|.+.|+.|+++. |+.
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            468999999999999999999999999999999984 554

>PRK07411 hypothetical protein; Validated

Probab=94.80  E-value=0.23  Score=43.37  Aligned_cols=86  Identities=20%  Similarity=0.187  Sum_probs=59.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDK   70 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~   70 (222)
                      .+...+++|.|+. |+|..+++.|+..|. +++++|.+                   ..+.+.+.+.+++..        
T Consensus        35 ~L~~~~VlivG~G-GlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~n--------  105 (390)
T PRK07411         35 RLKAASVLCIGTG-GLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN--------  105 (390)
T ss_pred             HHhcCcEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHC--------
Confidence            3567789999875 699999999999998 89988752                   123455566666654        


Q ss_pred             CCCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          71 KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        71 ~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      |..++..+...++.. ...+++       ...|++|.+.....
T Consensus       106 p~v~v~~~~~~~~~~-~~~~~~-------~~~D~Vvd~~d~~~  140 (390)
T PRK07411        106 PYCQVDLYETRLSSE-NALDIL-------APYDVVVDGTDNFP  140 (390)
T ss_pred             CCCeEEEEecccCHH-hHHHHH-------hCCCEEEECCCCHH
Confidence            566777777666653 333332       35699999876543

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.78  E-value=0.15  Score=42.39  Aligned_cols=42  Identities=29%  Similarity=0.338  Sum_probs=36.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .+.+++|.|+++++|.++++.+...|++++++.++.++.+.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  179 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL  179 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH
Confidence            567999999999999999998889999999999888765433

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=94.78  E-value=0.79  Score=37.63  Aligned_cols=104  Identities=18%  Similarity=0.199  Sum_probs=64.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+.++|..|+.+|.-...+........+|+.++.+++.++...+.....         .-.++.++..|+.+..      
T Consensus        77 ~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~---------g~~~v~~~~~d~~~l~------  141 (272)
T PRK11873         77 PGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKA---------GYTNVEFRLGEIEALP------  141 (272)
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHc---------CCCCEEEEEcchhhCC------
Confidence            5789999998887643333333333348999999998887776655442         1235677777764421      


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEE
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNV  135 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v  135 (222)
                        +  ..+.+|+++.|.......+...+.+.+.+-+++-|.-+
T Consensus       142 --~--~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~  180 (272)
T PRK11873        142 --V--ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFA  180 (272)
T ss_pred             --C--CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEE
Confidence              1  12478999877654433344555666666677766443

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.76  E-value=0.13  Score=42.84  Aligned_cols=44  Identities=20%  Similarity=0.235  Sum_probs=36.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR   59 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~   59 (222)
                      +++.|.|+ |.+|..+|..|+..|++|++++++++.++...+.+.
T Consensus         5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~   48 (292)
T PRK07530          5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLATIN   48 (292)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence            45677776 679999999999999999999999988777655443

>PLN03139 formate dehydrogenase; Provisional

Probab=94.73  E-value=0.36  Score=42.05  Aligned_cols=105  Identities=17%  Similarity=0.153  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH-------HHHHHhhhhhcccCCCCCeEEEEecCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA-------SEIRKHFEVATSEDKKPGEVLIKKLDL   82 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~-------~~i~~~~~~~~~~~~~~~~~~~~~~D~   82 (222)
                      .++.||++.|.| .|.||+.+|+.|...|.+|+.++|+....+...       ..+....        ...+++.+.+-+
T Consensus       195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell--------~~sDvV~l~lPl  265 (386)
T PLN03139        195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAML--------PKCDVVVINTPL  265 (386)
T ss_pred             cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHH--------hhCCEEEEeCCC
Confidence            468999999999 477999999999999999999988642111100       0111111        234666666654


Q ss_pred             CChhhHHHHHHH-HHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          83 ASFKSIRDCAQD-INQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        83 ~~~~~v~~~~~~-i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                      +  .+.+.+++. ..+. -+...++.|.+-..+++-..+.+.|..
T Consensus       266 t--~~T~~li~~~~l~~-mk~ga~lIN~aRG~iVDe~AL~~AL~s  307 (386)
T PLN03139        266 T--EKTRGMFNKERIAK-MKKGVLIVNNARGAIMDTQAVADACSS  307 (386)
T ss_pred             C--HHHHHHhCHHHHhh-CCCCeEEEECCCCchhhHHHHHHHHHc
Confidence            4  345555532 2222 245667777777777777777776643

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=94.70  E-value=0.19  Score=46.26  Aligned_cols=93  Identities=16%  Similarity=0.172  Sum_probs=57.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC----------------------hhHHHHHHHHHHHhhhhhccc
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD----------------------VEKAETTASEIRKHFEVATSE   68 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~----------------------~~~~~~~~~~i~~~~~~~~~~   68 (222)
                      +.+.+|+|.|+ ||+|..+|+.|+..|. ++++++..                      ..+...+.+.+++.+      
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~In------  408 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIF------  408 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHC------
Confidence            46778999987 5699999999999998 89998742                      113334455566554      


Q ss_pred             CCCCCeEEEEecCC------CChh---hHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          69 DKKPGEVLIKKLDL------ASFK---SIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        69 ~~~~~~~~~~~~D~------~~~~---~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                        |..++..+...+      -+.+   ++.+-.+.+.+.....|++|.+.-...
T Consensus       409 --P~v~i~~~~~~Ipm~Gh~i~~~~~~~~~~d~~~l~~Li~~~DvV~d~tDn~e  460 (664)
T TIGR01381       409 --PSIQATGHRLTVPMPGHPIDEKDVPELEKDIARLEQLIKDHDVVFLLLDSRE  460 (664)
T ss_pred             --CCcEEEEeeeeeccccccCCchhhhhccccHHHHHHHHhhCCEEEECCCCHH
Confidence              666776666553      1222   221112222222345599998865444

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PRK14852 hypothetical protein; Provisional

Probab=94.68  E-value=0.24  Score=47.71  Aligned_cols=83  Identities=19%  Similarity=0.187  Sum_probs=58.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      |.+.+++|.| .||+|..++..|+..|. ++.++|.+                   ..+.+.+++.+.+.+        |
T Consensus       330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~IN--------P  400 (989)
T PRK14852        330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVN--------P  400 (989)
T ss_pred             HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHC--------C
Confidence            5677899998 56899999999999998 88888742                   124555556666554        6


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhh
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      ..++..+...++. +.+..+++       .+|++|.+.-.
T Consensus       401 ~v~I~~~~~~I~~-en~~~fl~-------~~DiVVDa~D~  432 (989)
T PRK14852        401 FLDIRSFPEGVAA-ETIDAFLK-------DVDLLVDGIDF  432 (989)
T ss_pred             CCeEEEEecCCCH-HHHHHHhh-------CCCEEEECCCC
Confidence            6678888777744 45555443       46999986543

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=94.62  E-value=0.43  Score=40.34  Aligned_cols=118  Identities=18%  Similarity=0.130  Sum_probs=65.9

Q ss_pred             chHHHHHHHHHhCCCEEEEEeCChhHHHH-HHHHHHHhhhhhc---ccCCCCCeEEEEecCCCChhhHHHHHHHHHhhcc
Q psy7936          25 GIGKVTAQTLYGIGAKVIMACRDVEKAET-TASEIRKHFEVAT---SEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEA  100 (222)
Q Consensus        25 giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~i~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~  100 (222)
                      .=|..+|+.|++.|++|++++|+.+..++ ..+.+....-...   .+.....++++..+  .+.+.++.+++.+.....
T Consensus        30 ~gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~L--Pd~aaV~eVl~GLaa~L~  107 (341)
T TIGR01724        30 YGGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFT--PFGKGTFSIARTIIEHVP  107 (341)
T ss_pred             CCHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEec--CCHHHHHHHHHHHHhcCC
Confidence            44889999999999999999998765432 2222222100000   00001234444333  355666666655544432


Q ss_pred             ceeEEEechhhHHhhhHHHHHHHHHhhc--CCCCeEEEEEeCCcc-cCCcC
Q psy7936         101 NVHILINNAVYCILSNNILFYSILFYAI--PGKNVNVYAVHPGIV-KTELG  148 (222)
Q Consensus       101 ~id~li~~ag~~~l~~~~~~~~~la~~~--~~~gI~v~~v~PG~v-~T~~~  148 (222)
                      +=-++|++.-+.    ...+.+.|-.++  .++.+-|.+.|||-| .|+-+
T Consensus       108 ~GaIVID~STIs----P~t~~~~~e~~l~~~r~d~~v~s~HP~~vP~~~~~  154 (341)
T TIGR01724       108 ENAVICNTCTVS----PVVLYYSLEKILRLKRTDVGISSMHPAAVPGTPQH  154 (341)
T ss_pred             CCCEEEECCCCC----HHHHHHHHHHHhhcCccccCeeccCCCCCCCCCCC
Confidence            223444443322    245555555544  456899999999988 55554

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=94.62  E-value=0.27  Score=41.26  Aligned_cols=42  Identities=36%  Similarity=0.533  Sum_probs=36.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .+.+++|.|+++.+|..+++.....|++++.++++.++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            467899999999999999998889999999999988876555

>KOG0023|consensus

Probab=94.61  E-value=0.13  Score=43.27  Aligned_cols=46  Identities=24%  Similarity=0.271  Sum_probs=37.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      .|+.+-|+|+.+ +| .++.++++. |.+|++++++..+-++..+.+..
T Consensus       181 pG~~vgI~GlGG-LG-h~aVq~AKAMG~rV~vis~~~~kkeea~~~LGA  227 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LG-HMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGA  227 (360)
T ss_pred             CCcEEEEecCcc-cc-hHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCc
Confidence            799999999988 88 667777764 89999999998777777776643

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=94.60  E-value=0.32  Score=41.09  Aligned_cols=114  Identities=13%  Similarity=0.130  Sum_probs=71.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .++.|+|+ |.+|..+|..|+..|.  .+++++.+.+.++....++....-   .  .+..++.  ..  .+.+.     
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~---~--~~~~~v~--~~--~dy~~-----   68 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSA---F--LKNPKIE--AD--KDYSV-----   68 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhc---c--CCCCEEE--EC--CCHHH-----
Confidence            46889996 9999999999998875  799999999877777777765420   0  0011111  11  11111     


Q ss_pred             HHHHhhccceeEEEechhhHHh---------hhHHHHHHHHHhh---cCCCCeEEEEEeCCcccCCcCC
Q psy7936          93 QDINQTEANVHILINNAVYCIL---------SNNILFYSILFYA---IPGKNVNVYAVHPGIVKTELGR  149 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l---------~~~~~~~~~la~~---~~~~gI~v~~v~PG~v~T~~~~  149 (222)
                            ...-|++|.+||....         ..+..+++.++..   ..++++-++.-+|--+-|....
T Consensus        69 ------~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~~  131 (312)
T cd05293          69 ------TANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMTYVAW  131 (312)
T ss_pred             ------hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHHHHHHHHH
Confidence                  1355999999997651         2244445544443   3456777777777765554433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=94.58  E-value=0.12  Score=43.44  Aligned_cols=40  Identities=25%  Similarity=0.232  Sum_probs=34.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      ++.|+| .|-+|.++|..|+++|++|++++|+++..+...+
T Consensus         4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~   43 (308)
T PRK06129          4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPA   43 (308)
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHH
Confidence            578888 6679999999999999999999999887666544

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.56  E-value=0.35  Score=40.85  Aligned_cols=105  Identities=15%  Similarity=0.047  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH---HH--HHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE---TT--ASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~---~~--~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      ..+.||++.|.|- |.||+++|+.|...|.+|+.++++.....   ..  ...+.+..        ...+++.+.+..+.
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l--------~~aDvvv~~lPlt~  202 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFL--------SQTRVLINLLPNTP  202 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHH--------hcCCEEEECCCCCH
Confidence            4578999999986 45999999999999999999987653211   00  01121111        24466676666664


Q ss_pred             hhhHHHHHHH-HHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          85 FKSIRDCAQD-INQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        85 ~~~v~~~~~~-i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                        +.+.+++. ..+. -+.+.++.|.|-..+++-..+.+.|..
T Consensus       203 --~T~~li~~~~l~~-mk~ga~lIN~aRG~vVde~aL~~aL~~  242 (312)
T PRK15469        203 --ETVGIINQQLLEQ-LPDGAYLLNLARGVHVVEDDLLAALDS  242 (312)
T ss_pred             --HHHHHhHHHHHhc-CCCCcEEEECCCccccCHHHHHHHHhc
Confidence              45555542 2222 255677888887777776666666643

>KOG0069|consensus

Probab=94.56  E-value=0.39  Score=40.86  Aligned_cols=134  Identities=21%  Similarity=0.243  Sum_probs=84.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .-++.||++.|.|..+ ||+++|+.|-..|..+....|+....++..+...+...  .-+.....+++.+.|-++  .+.
T Consensus       157 g~~~~gK~vgilG~G~-IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d--~~~~~~~sD~ivv~~pLt--~~T  231 (336)
T KOG0069|consen  157 GYDLEGKTVGILGLGR-IGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVD--IEELLANSDVIVVNCPLT--KET  231 (336)
T ss_pred             cccccCCEEEEecCcH-HHHHHHHhhhhccceeeeecccCCchhhHHHhcccccC--HHHHHhhCCEEEEecCCC--HHH
Confidence            3567899999999865 99999999999996677777766544443322211000  000012457777777776  455


Q ss_pred             HHHHHH-HHhhccceeEEEechhhHHhhhHHHHHHHHHh-hcCCCCeEEEEEeCCcccCCcCC
Q psy7936          89 RDCAQD-INQTEANVHILINNAVYCILSNNILFYSILFY-AIPGKNVNVYAVHPGIVKTELGR  149 (222)
Q Consensus        89 ~~~~~~-i~~~~~~id~li~~ag~~~l~~~~~~~~~la~-~~~~~gI~v~~v~PG~v~T~~~~  149 (222)
                      +.+++. +.+. -+-.++|-|.+-..+.+-..++++|.. .....|.-|..--| .++-+...
T Consensus       232 ~~liNk~~~~~-mk~g~vlVN~aRG~iide~~l~eaL~sG~i~~aGlDVf~~EP-~~~~~l~~  292 (336)
T KOG0069|consen  232 RHLINKKFIEK-MKDGAVLVNTARGAIIDEEALVEALKSGKIAGAGLDVFEPEP-PVDHPLLT  292 (336)
T ss_pred             HHHhhHHHHHh-cCCCeEEEeccccccccHHHHHHHHhcCCcccccccccCCCC-CCCcchhc
Confidence            555543 2222 345666666666777777788887765 34566888888888 66555443

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=94.55  E-value=0.13  Score=42.76  Aligned_cols=43  Identities=21%  Similarity=0.190  Sum_probs=35.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      +++.|.|+ |-+|..+|..|+..|++|++++++++.+++..+.+
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~i   46 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAMELI   46 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH
Confidence            46777776 55999999999999999999999998887655543

>PLN02396 hexaprenyldihydroxybenzoate methyltransferase

Probab=94.53  E-value=1.4  Score=37.37  Aligned_cols=105  Identities=13%  Similarity=0.109  Sum_probs=73.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +.+.++|=.|+.+|.   ++..|++.|++|+.++-+++.++...+......        ...++.++..|+.+.      
T Consensus       130 ~~g~~ILDIGCG~G~---~s~~La~~g~~V~GID~s~~~i~~Ar~~~~~~~--------~~~~i~~~~~dae~l------  192 (322)
T PLN02396        130 FEGLKFIDIGCGGGL---LSEPLARMGATVTGVDAVDKNVKIARLHADMDP--------VTSTIEYLCTTAEKL------  192 (322)
T ss_pred             CCCCEEEEeeCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--------cccceeEEecCHHHh------
Confidence            467788888888776   345566678999999999988766654433210        123677777775322      


Q ss_pred             HHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEE
Q psy7936          92 AQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~  137 (222)
                          ....+.+|++++......+.+...+.+.++.-+++.|.-+.+
T Consensus       193 ----~~~~~~FD~Vi~~~vLeHv~d~~~~L~~l~r~LkPGG~liis  234 (322)
T PLN02396        193 ----ADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLS  234 (322)
T ss_pred             ----hhccCCCCEEEEhhHHHhcCCHHHHHHHHHHHcCCCcEEEEE
Confidence                111247899999888777778888999999989888866554

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.52  E-value=0.14  Score=42.59  Aligned_cols=40  Identities=25%  Similarity=0.356  Sum_probs=35.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      .++.||.++|.|.|.-+|+-++..|.+++++|+++.....
T Consensus       154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~  193 (284)
T PRK14190        154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK  193 (284)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch
Confidence            4689999999999999999999999999999998865443

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.51  E-value=0.17  Score=42.69  Aligned_cols=102  Identities=17%  Similarity=0.092  Sum_probs=68.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHH------HHHHHHHHHhhhhhcccCCCCCeEEEEecCCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA------ETTASEIRKHFEVATSEDKKPGEVLIKKLDLA   83 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~   83 (222)
                      .++.||++.|.|- |.||+++|+.+...|.+|+.++|.....      .++.+.+            ...+++.+.+.++
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell------------~~sDvv~lh~Plt  207 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELL------------KTSDIISIHAPLN  207 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHh------------hcCCEEEEeCCCC
Confidence            4689999999997 6799999999999999999998753210      1112222            2347788888877


Q ss_pred             ChhhHHHHHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          84 SFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        84 ~~~~v~~~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                      ..  -+.++++-.=..-+.+.++-|.+-..+++-..+.+.|..
T Consensus       208 ~~--T~~li~~~~~~~Mk~~a~lIN~aRG~vVDe~AL~~AL~~  248 (311)
T PRK08410        208 EK--TKNLIAYKELKLLKDGAILINVGRGGIVNEKDLAKALDE  248 (311)
T ss_pred             ch--hhcccCHHHHHhCCCCeEEEECCCccccCHHHHHHHHHc
Confidence            53  333333211111366788888888888887777777753

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.51  E-value=0.1  Score=43.42  Aligned_cols=39  Identities=26%  Similarity=0.348  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      .++.||+++|.|.+.-+|+.++..|.++|++|+++.+..
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t  192 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT  192 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC
Confidence            468999999999999999999999999999999876543

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.46  E-value=0.12  Score=43.02  Aligned_cols=40  Identities=18%  Similarity=0.248  Sum_probs=35.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      .++.||.++|.|-+.-+|+-++..|..+|++|+++.+...
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~  194 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK  194 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC
Confidence            4688999999999999999999999999999999876543

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=94.43  E-value=0.25  Score=41.37  Aligned_cols=29  Identities=21%  Similarity=0.402  Sum_probs=24.4

Q ss_pred             EEEecCCCchHHHHHHHHHhCCC-EEEEEeC
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGA-KVIMACR   46 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~-~v~~~~r   46 (222)
                      ++|.|+ ||+|..+|+.|+..|. +++++|.
T Consensus         2 VLIvGa-GGLGs~vA~~La~aGVg~ItlvD~   31 (307)
T cd01486           2 CLLLGA-GTLGCNVARNLLGWGVRHITFVDS   31 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            667766 5799999999999998 8888874

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK07574 formate dehydrogenase; Provisional

Probab=94.39  E-value=0.35  Score=42.08  Aligned_cols=105  Identities=15%  Similarity=0.070  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH-------HHHHHHhhhhhcccCCCCCeEEEEecCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT-------ASEIRKHFEVATSEDKKPGEVLIKKLDL   82 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~D~   82 (222)
                      .++.||++.|.|. |.||+.+|+.|...|.+|+..+|+....+..       ...+.+..        ...+++.+.+-+
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell--------~~aDvV~l~lPl  258 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLV--------SVCDVVTIHCPL  258 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHh--------hcCCEEEEcCCC
Confidence            4589999999998 5599999999999999999999875211100       01111111        244667777766


Q ss_pred             CChhhHHHHHHH-HHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          83 ASFKSIRDCAQD-INQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        83 ~~~~~v~~~~~~-i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                      +.  +.+.++++ ..+. -+-..++-|.+-..+++-..+.+.|..
T Consensus       259 t~--~T~~li~~~~l~~-mk~ga~lIN~aRG~iVDe~AL~~AL~s  300 (385)
T PRK07574        259 HP--ETEHLFDADVLSR-MKRGSYLVNTARGKIVDRDAVVRALES  300 (385)
T ss_pred             CH--HHHHHhCHHHHhc-CCCCcEEEECCCCchhhHHHHHHHHHh
Confidence            54  45555532 2222 245667777777777777777776654

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.38  E-value=0.13  Score=34.51  Aligned_cols=36  Identities=39%  Similarity=0.572  Sum_probs=32.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACR   46 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r   46 (222)
                      .++++++++|.|+ +++|..++..|.+. +.+|++++|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4578999999999 99999999999998 568998887

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=94.38  E-value=1.9  Score=33.65  Aligned_cols=100  Identities=11%  Similarity=0.105  Sum_probs=68.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ..++++|-.|+..|.   .+..|+++|++|+.++.+++.++.+.+.+...         .-.++.+...|+.+..     
T Consensus        29 ~~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~---------~~~~v~~~~~d~~~~~-----   91 (197)
T PRK11207         29 VKPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAE---------NLDNLHTAVVDLNNLT-----   91 (197)
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc---------CCCcceEEecChhhCC-----
Confidence            356789999988765   45677788999999999998877766655442         1223666667765431     


Q ss_pred             HHHHHhhccceeEEEechhhHHhh--hHHHHHHHHHhhcCCCCeE
Q psy7936          92 AQDINQTEANVHILINNAVYCILS--NNILFYSILFYAIPGKNVN  134 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~--~~~~~~~~la~~~~~~gI~  134 (222)
                         .   .+.+|+++++.....+.  ....+.+.++.-+++.|.-
T Consensus        92 ---~---~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~  130 (197)
T PRK11207         92 ---F---DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYN  130 (197)
T ss_pred             ---c---CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEE
Confidence               1   13689998876543322  3567888888888888864

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.31  E-value=0.11  Score=43.28  Aligned_cols=36  Identities=31%  Similarity=0.433  Sum_probs=33.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC   45 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~   45 (222)
                      .++.||.++|.|.|+-+|+.+|..|.++|++|+++.
T Consensus       154 i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~  189 (284)
T PRK14179        154 VELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH  189 (284)
T ss_pred             CCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence            568999999999999999999999999999999874

>PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase []

Probab=94.31  E-value=0.18  Score=44.72  Aligned_cols=77  Identities=17%  Similarity=0.159  Sum_probs=48.4

Q ss_pred             CCCEEEEecCCCchHHH-HHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          13 DGKTVIITGCNTGIGKV-TAQTLYGIG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~-~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++++.||.+|+=.. .++..++.+  .+|+.+-.|+.....+.+.++...        -+.++.+++.|+++.+.-.
T Consensus       186 ~~~vVldVGAGrGpL~~~al~A~~~~~~a~~VyAVEkn~~A~~~l~~~v~~n~--------w~~~V~vi~~d~r~v~lpe  257 (448)
T PF05185_consen  186 KDKVVLDVGAGRGPLSMFALQAGARAGGAVKVYAVEKNPNAVVTLQKRVNANG--------WGDKVTVIHGDMREVELPE  257 (448)
T ss_dssp             TT-EEEEES-TTSHHHHHHHHTTHHHCCESEEEEEESSTHHHHHHHHHHHHTT--------TTTTEEEEES-TTTSCHSS
T ss_pred             cceEEEEeCCCccHHHHHHHHHHHHhCCCeEEEEEcCCHhHHHHHHHHHHhcC--------CCCeEEEEeCcccCCCCCC
Confidence            46899999999888544 444444444  389999999876655555544421        2468999999988765333


Q ss_pred             HHHHHHHhhccceeEEEec
Q psy7936          90 DCAQDINQTEANVHILINN  108 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~  108 (222)
                                 ++|++|.=
T Consensus       258 -----------kvDIIVSE  265 (448)
T PF05185_consen  258 -----------KVDIIVSE  265 (448)
T ss_dssp             ------------EEEEEE-
T ss_pred             -----------ceeEEEEe
Confidence                       56777753

These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B ....

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.30  E-value=0.2  Score=42.27  Aligned_cols=113  Identities=19%  Similarity=0.181  Sum_probs=69.1

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      ++.|+|+ |++|..+|..|+.++.  .+++++.+++.++-...++....-       +...-..+..| .+.+++     
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~-------~~~~~~~i~~~-~~y~~~-----   67 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAA-------PLGSDVKITGD-GDYEDL-----   67 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcch-------hccCceEEecC-CChhhh-----
Confidence            5789999 9999999999988764  899999997766655555544210       00011122222 222222     


Q ss_pred             HHHhhccceeEEEechhhHH---------hhhHHHHHHHHHhhcC---CCCeEEEEEeCCcccCCcC
Q psy7936          94 DINQTEANVHILINNAVYCI---------LSNNILFYSILFYAIP---GKNVNVYAVHPGIVKTELG  148 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~---------l~~~~~~~~~la~~~~---~~gI~v~~v~PG~v~T~~~  148 (222)
                            ..-|++|..||...         +..+...++.++.+..   +.+|-++.=+|=-+-|...
T Consensus        68 ------~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~  128 (313)
T COG0039          68 ------KGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIA  128 (313)
T ss_pred             ------cCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHH
Confidence                  25699999998877         2335666666666543   3456666556654444433

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=94.30  E-value=0.32  Score=42.49  Aligned_cols=44  Identities=11%  Similarity=0.080  Sum_probs=34.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC---EEEEEeCChhHHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA---KVIMACRDVEKAETTAS   56 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~   56 (222)
                      .|.+++|.|+++++|...++.+...|.   +|+++++++++++.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            467899999999999987765555443   79999999988765544

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=94.28  E-value=0.34  Score=40.82  Aligned_cols=37  Identities=32%  Similarity=0.421  Sum_probs=32.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      .+++++|.|+++++|.++++.....|++++.+.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            5789999999999999998888888999888887663

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.26  E-value=0.32  Score=41.04  Aligned_cols=42  Identities=31%  Similarity=0.427  Sum_probs=36.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .+.+++|.|+++++|.++++.+-..|++|+.+.+++++.+.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  206 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA  206 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            467999999999999999999889999999999998765433

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.26  E-value=0.37  Score=42.03  Aligned_cols=84  Identities=18%  Similarity=0.234  Sum_probs=56.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      |.+.+++|.|+. |+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+++..        |
T Consensus        40 L~~~~VlviG~G-GlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n--------p  110 (392)
T PRK07878         40 LKNARVLVIGAG-GLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEIN--------P  110 (392)
T ss_pred             HhcCCEEEECCC-HHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhC--------C
Confidence            456788888875 799999999999998 888887531                   23444555565553        5


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhH
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      ..++..+...++.. ...+++       ...|++|.+....
T Consensus       111 ~v~i~~~~~~i~~~-~~~~~~-------~~~D~Vvd~~d~~  143 (392)
T PRK07878        111 LVNVRLHEFRLDPS-NAVELF-------SQYDLILDGTDNF  143 (392)
T ss_pred             CcEEEEEeccCChh-HHHHHH-------hcCCEEEECCCCH
Confidence            56677666666542 333332       3569999886543

>PRK06487 glycerate dehydrogenase; Provisional

Probab=94.24  E-value=0.15  Score=43.12  Aligned_cols=102  Identities=16%  Similarity=0.100  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH----HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK----AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      ..+.||++.|.|- |.||+++|+.+...|.+|+..+|....    ..++.+.+            ...+++.+.+-++..
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell------------~~sDiv~l~lPlt~~  210 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELL------------PQVDALTLHCPLTEH  210 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHH------------HhCCEEEECCCCChH
Confidence            3689999999997 679999999999999999988875321    01112222            234777888877753


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                        -+.+++.-.=..-+.+.++-|.|-..+++-..+.++|..
T Consensus       211 --T~~li~~~~~~~mk~ga~lIN~aRG~vVde~AL~~AL~~  249 (317)
T PRK06487        211 --TRHLIGARELALMKPGALLINTARGGLVDEQALADALRS  249 (317)
T ss_pred             --HhcCcCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHc
Confidence              344433211111356778888888788777777777653

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=94.24  E-value=0.3  Score=41.45  Aligned_cols=124  Identities=22%  Similarity=0.216  Sum_probs=73.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHH---------HHHHHHHHhhhhhcccCCCCCeEEEEe
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAE---------TTASEIRKHFEVATSEDKKPGEVLIKK   79 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~   79 (222)
                      ..+.|||+-|.|... ||+.+|+.+...|.+|+.+++ +.....         ++.+.+.            ..+++.++
T Consensus       138 ~el~gkTvGIiG~G~-IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~------------~sDiv~lh  204 (324)
T COG0111         138 TELAGKTVGIIGLGR-IGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLA------------EADILTLH  204 (324)
T ss_pred             ccccCCEEEEECCCH-HHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHh------------hCCEEEEc
Confidence            367899999999765 999999999999999999998 333211         1222232            34778888


Q ss_pred             cCCCChhhHHHHHHHH-HhhccceeEEEechhhHHhhhHHHHHHHHHhh-cCCCCeEEEEEeCCcccCCcCC
Q psy7936          80 LDLASFKSIRDCAQDI-NQTEANVHILINNAVYCILSNNILFYSILFYA-IPGKNVNVYAVHPGIVKTELGR  149 (222)
Q Consensus        80 ~D~~~~~~v~~~~~~i-~~~~~~id~li~~ag~~~l~~~~~~~~~la~~-~~~~gI~v~~v~PG~v~T~~~~  149 (222)
                      +-+++.  -+.+++.- ... -+...++-|++=..++.-..+.+.|..- .+.-++-|..--|-+-+.++..
T Consensus       205 ~PlT~e--T~g~i~~~~~a~-MK~gailIN~aRG~vVde~aL~~AL~~G~i~gA~lDVf~~EPl~~~~pL~~  273 (324)
T COG0111         205 LPLTPE--TRGLINAEELAK-MKPGAILINAARGGVVDEDALLAALDSGKIAGAALDVFEEEPLPADSPLWD  273 (324)
T ss_pred             CCCCcc--hhcccCHHHHhh-CCCCeEEEECCCcceecHHHHHHHHHcCCcceEEecCCCCCCCCCCChhhc
Confidence            888764  34443321 111 1333455555556666666666666442 2222344444455444444433

>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A

Probab=94.23  E-value=0.31  Score=33.48  Aligned_cols=86  Identities=12%  Similarity=0.121  Sum_probs=54.6

Q ss_pred             CCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHHhhcc
Q psy7936          23 NTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEA  100 (222)
Q Consensus        23 s~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~  100 (222)
                      ++...+.+++.+ ..|  .+++.++.+++.++...+.....          +.++.+++.|+.+..          ...+
T Consensus         8 ~G~~~~~l~~~~-~~~~~~~~~gvD~s~~~l~~~~~~~~~~----------~~~~~~~~~D~~~l~----------~~~~   66 (101)
T PF13649_consen    8 TGRVTRALARRF-DAGPSSRVIGVDISPEMLELAKKRFSED----------GPKVRFVQADARDLP----------FSDG   66 (101)
T ss_dssp             TSHHHHHHHHHS------SEEEEEES-HHHHHHHHHHSHHT----------TTTSEEEESCTTCHH----------HHSS
T ss_pred             CcHHHHHHHHHh-hhcccceEEEEECCHHHHHHHHHhchhc----------CCceEEEECCHhHCc----------ccCC
Confidence            344556666666 556  69999999999988877776553          348889999997742          2335


Q ss_pred             ceeEEEechh-hHHhhh--HHHHHHHHHhhcC
Q psy7936         101 NVHILINNAV-YCILSN--NILFYSILFYAIP  129 (222)
Q Consensus       101 ~id~li~~ag-~~~l~~--~~~~~~~la~~~~  129 (222)
                      ++|+++++.. ...+..  +..+.+.+++-++
T Consensus        67 ~~D~v~~~~~~~~~~~~~~~~~ll~~~~~~l~   98 (101)
T PF13649_consen   67 KFDLVVCSGLSLHHLSPEELEALLRRIARLLR   98 (101)
T ss_dssp             SEEEEEE-TTGGGGSSHHHHHHHHHHHHHTEE
T ss_pred             CeeEEEEcCCccCCCCHHHHHHHHHHHHHHhC
Confidence            8999999655 333332  5666666655443

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=94.21  E-value=1.2  Score=34.73  Aligned_cols=98  Identities=14%  Similarity=0.069  Sum_probs=68.2

Q ss_pred             CCEEEEecCCCch-HHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGI-GKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~gi-G~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +++++-.|+..|. +..+++.  ..+.+|+.++.+++.++.+.+.++..         +..++.++++|..+...     
T Consensus        46 g~~VLDiGcGtG~~al~la~~--~~~~~V~giD~s~~~l~~A~~~~~~~---------~l~~i~~~~~d~~~~~~-----  109 (187)
T PRK00107         46 GERVLDVGSGAGFPGIPLAIA--RPELKVTLVDSLGKKIAFLREVAAEL---------GLKNVTVVHGRAEEFGQ-----  109 (187)
T ss_pred             CCeEEEEcCCCCHHHHHHHHH--CCCCeEEEEeCcHHHHHHHHHHHHHc---------CCCCEEEEeccHhhCCC-----
Confidence            6789999988665 6666653  34679999999998887777766654         22348888888765321     


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEE
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~  137 (222)
                            ..++|+++.++.    .+...+.+.+..-+.+.|+-+..
T Consensus       110 ------~~~fDlV~~~~~----~~~~~~l~~~~~~LkpGG~lv~~  144 (187)
T PRK00107        110 ------EEKFDVVTSRAV----ASLSDLVELCLPLLKPGGRFLAL  144 (187)
T ss_pred             ------CCCccEEEEccc----cCHHHHHHHHHHhcCCCeEEEEE
Confidence                  247899998862    34466777777778777765544

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.21  E-value=0.48  Score=40.18  Aligned_cols=39  Identities=33%  Similarity=0.467  Sum_probs=33.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      ...+.+|++.|.|- |.||.++|+.|...|.+|++..|..
T Consensus        11 ~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~   49 (335)
T PRK13403         11 VELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPG   49 (335)
T ss_pred             hhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcc
Confidence            35578999999987 5699999999999999999887653

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.17  E-value=0.45  Score=40.76  Aligned_cols=80  Identities=18%  Similarity=0.195  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh-hhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF-KSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~   90 (222)
                      .|.+++|.|+ +++|...++..-..|+ +|++++++.++.+.+. .+             +....+   |..+. .++.+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~-~~-------------Ga~~~i---~~~~~~~~~~~  248 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAK-KF-------------GVTEFV---NPKDHDKPVQE  248 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-------------CCceEE---cccccchhHHH
Confidence            5788999985 8999998887778898 7999999988665432 22             222111   22221 23433


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+.++..  +.+|++|.+.|..
T Consensus       249 ~v~~~~~--~~~d~vid~~G~~  268 (369)
T cd08301         249 VIAEMTG--GGVDYSFECTGNI  268 (369)
T ss_pred             HHHHHhC--CCCCEEEECCCCh
Confidence            3333332  2689999998753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.17  E-value=0.13  Score=42.74  Aligned_cols=41  Identities=29%  Similarity=0.362  Sum_probs=35.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK   50 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~   50 (222)
                      .++.||.++|.|.|.-+|+-++..|.+++++|+++.+....
T Consensus       151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~  191 (287)
T PRK14173        151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQD  191 (287)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCC
Confidence            46899999999999999999999999999999987654443

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.16  E-value=0.13  Score=42.68  Aligned_cols=43  Identities=21%  Similarity=0.312  Sum_probs=37.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE   52 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~   52 (222)
                      .++.||.++|.|-|.-+|+-++..|.++|++|+++.+....++
T Consensus       155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~  197 (284)
T PRK14177        155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP  197 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            5689999999999999999999999999999999875544443

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=94.15  E-value=0.42  Score=34.26  Aligned_cols=67  Identities=24%  Similarity=0.331  Sum_probs=43.3

Q ss_pred             chHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHHhhc--cce
Q psy7936          25 GIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTE--ANV  102 (222)
Q Consensus        25 giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~~~~--~~i  102 (222)
                      |||...++-+...|++|+++++++++.+-+.+ +             +....   .|-++.+    +.+.+.+..  ..+
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~-~-------------Ga~~~---~~~~~~~----~~~~i~~~~~~~~~   59 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE-L-------------GADHV---IDYSDDD----FVEQIRELTGGRGV   59 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-T-------------TESEE---EETTTSS----HHHHHHHHTTTSSE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh-h-------------ccccc---ccccccc----cccccccccccccc
Confidence            68888888888889999999999987654432 2             21222   2333322    333333333  379


Q ss_pred             eEEEechhhH
Q psy7936         103 HILINNAVYC  112 (222)
Q Consensus       103 d~li~~ag~~  112 (222)
                      |++|.|+|..
T Consensus        60 d~vid~~g~~   69 (130)
T PF00107_consen   60 DVVIDCVGSG   69 (130)
T ss_dssp             EEEEESSSSH
T ss_pred             eEEEEecCcH
Confidence            9999999943

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.14  E-value=0.14  Score=42.47  Aligned_cols=42  Identities=26%  Similarity=0.386  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA   51 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~   51 (222)
                      .++.||.++|.|-|.-+|+-++..|.++|++|+++.+....+
T Consensus       154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l  195 (278)
T PRK14172        154 IDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNL  195 (278)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH
Confidence            468999999999999999999999999999999887544433

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.12  E-value=0.3  Score=35.29  Aligned_cols=77  Identities=17%  Similarity=0.264  Sum_probs=51.3

Q ss_pred             EEEEecCCCchHHHHHHHHHh-CCCEEEE-EeCCh----------------------hHHHHHHHHHHHhhhhhcccCCC
Q psy7936          16 TVIITGCNTGIGKVTAQTLYG-IGAKVIM-ACRDV----------------------EKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~-~g~~v~~-~~r~~----------------------~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      .+.|.|++|-+|+.+++.+.+ .+..++. ++|+.                      ..++++.+.              
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~--------------   67 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE--------------   67 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH--------------
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc--------------
Confidence            478999999999999999999 5666544 45655                      112222111              


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhH
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                       .+   +..|++.++.+...++.+.+.  ++.+++-..|..
T Consensus        68 -~D---VvIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~~  102 (124)
T PF01113_consen   68 -AD---VVIDFTNPDAVYDNLEYALKH--GVPLVIGTTGFS  102 (124)
T ss_dssp             --S---EEEEES-HHHHHHHHHHHHHH--T-EEEEE-SSSH
T ss_pred             -CC---EEEEcCChHHhHHHHHHHHhC--CCCEEEECCCCC
Confidence             12   556999999888888877665  678888887754

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	222
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		2e-10
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		2e-07
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		6e-07
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		1e-06
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		4e-06
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-05
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		3e-05
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		3e-05
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		4e-05
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-05
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-05
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		7e-05
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-04
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		2e-04
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-04
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		3e-04
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-04
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		5e-04
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		5e-04
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		6e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           +TV+ITG N+G+G VTA+ L   GA VIMA RD  K E  A  +              G+
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-------------AGQ 63
Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           V +++LDL    S+R  A  ++  +    +LINNA
Sbjct: 64  VEVRELDLQDLSSVRRFADGVSGAD----VLINNA 94

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L G+  ++TG + GIG++ AQ L   GA+V +  RD E    TA+ +  +          
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---------- 76
Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            G+      DL+S    R  AQ + +  A + IL+NNA
Sbjct: 77  -GDCQAIPADLSSEAGARRLAQALGELSARLDILVNNA 113

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIG---AKVIMACRDVEKAETTASEIRKHFEV 64
           +A RL  KTV+ITG + GIGK TA           K+I+A R +EK E     I + F  
Sbjct: 27  AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN 86
Query: 65  ATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNI 118
           A        +V + +LD+   + I+   +++ Q   ++ IL+NNA   + S+ +
Sbjct: 87  A--------KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRV 132

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RLDGKT +ITG   GIG+  A+     GA+V +A  ++E A  TA+EI            
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI------------ 49
Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            P    I  LD+    SI  C  ++     ++ IL+NNA
Sbjct: 50  GPAACAI-ALDVTDQASIDRCVAELLDRWGSIDILVNNA 87

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           S L G+  ++TG + GIG   A+ L  +GA+V++  RDVEK      EI     VA    
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREI-----VAAG-- 77
Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              GE      DL+   +I   A  +        +L+NNA
Sbjct: 78  ---GEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNA 114

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 20/122 (16%)
Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           +L GKT ++TG   GIGK  A +L   GA V++  R  E    T  EIR  +        
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY-------- 58
Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPG 130
            P  +L  +  +A   + + C QD+ +    V ILINN          +F  + ++ IP 
Sbjct: 59  -PDAIL--QPVVADLGTEQGC-QDVIEKYPKVDILINNLG--------IFEPVEYFDIPD 106
Query: 131 KN 132
           ++
Sbjct: 107 ED 108

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L G+  I+TG  TGIGK   + L  +G+ V++A R +E+ ++ A E++     A     K
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQ-----ANLPPTK 70
Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              V+  + ++ + + + +  +    T   ++ L+NN 
Sbjct: 71  QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNG 108

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K ++ITG + GIG+  A+ L   GAK+++  R   + E  A+EIR             G 
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIR----------DAGGT 54
Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILS 115
            L + LD+    S+   AQ    T   + +L+NNA    LS
Sbjct: 55  ALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLS 95

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSE 68
           A  ++GK  ++TG   GIG+  A+ L   GAKV +   ++E      + + + FE     
Sbjct: 2   AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE----- 56
Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              P + L  + D+A  + +RD  + +      + IL+NNA
Sbjct: 57  ---PQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNA 94

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           + GK  +ITG ++GIG   A+     GA +++  R V++    A  +++ F V       
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV------- 57
Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              VL   +D+A+ + +    + +  +     IL+NNA
Sbjct: 58  --RVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNA 93

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           + GK  +ITG ++GIG   A+     GA +++  R V++    A  +++ F V       
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV------- 57
Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              VL   +D+A+ + +    + +  +     IL+NNA
Sbjct: 58  --RVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNA 93

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           +L GK  ++TG   GIG+  A+ L   G+ VI+     E+A+  A EI   + V     K
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV-----K 58
Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G     +++L S +SI    ++I      + IL+NNA
Sbjct: 59  AHG----VEMNLLSEESINKAFEEIYNLVDGIDILVNNA 93

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVAT 66
           +A +  GK V+ITG + GIG   A+TL  +G KV +  R + E A+   +E+        
Sbjct: 23  NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNEL-------- 74
Query: 67  SEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             ++K  +  + K D AS     +  Q I Q++  +  L+NNA
Sbjct: 75  --EEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNA 115

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L     ++TG ++GIG  T + L   GA V    RD E+     S +R+ F         
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF--------- 56
Query: 72  PGEVLIKKL-DLASFKSIRDCAQDINQTEANVHILINNA 109
           PG  L   + D+     +R  A+   +T     IL+NNA
Sbjct: 57  PGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNA 95

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 55/98 (56%), Gaps = 17/98 (17%)
Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GKT +ITG ++GIG   A+ L+ +G+KVI++  + EK ++  + ++ ++ +       
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTI------- 64
Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    ++ +  +  +C+  I++T +N+ IL+ NA
Sbjct: 65  ---------EVCNLANKEECSNLISKT-SNLDILVCNA 92

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L+ K  +ITG + GIG+  A+ L   G  + +  R V++ E  A E+ +   V       
Sbjct: 22  LEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV------- 74
Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             EV    LD++  +S+ + ++ + +   +V +++ NA
Sbjct: 75  --EVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANA 110

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K ++ITG ++G G++TA+ L G G +V  + RD+     +  E    F      D +  E
Sbjct: 6   KIILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDNDVDLRTLE 65
Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCIL 114
                LD+ S  S+      I   +  + +LI+NA + + 
Sbjct: 66  -----LDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVF 100

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RLDGK  IITG   GIGK  A T    GA V+++  + + A     EI+          +
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ----------Q 57
Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+    + D+ S + +   A         V IL+NNA
Sbjct: 58  LGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNA 96

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI 58
          RL+GK+ +ITG   GIG+  A+     GA V +A  D+E+A   A+EI
Sbjct: 5  RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI 52

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K  +ITG + GIG+  A+ L   G  + +  R V++ E  A E+ +   V         E
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV---------E 53
Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           V    LD++  +S+ + ++ + +   +V +++ NA
Sbjct: 54  VFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANA 88

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	222
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	3e-34
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	7e-20
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-26
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-14
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-24
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-13
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-17
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-17
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-17
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-17
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	6e-17
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-16
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-16
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-16
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-16
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	3e-16
3imf_A	257	Short chain dehydrogenase; structural genomics, in	3e-16
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	3e-16
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-16
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	4e-16
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-16
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	7e-16
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	7e-16
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	8e-16
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	1e-15
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-15
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-15
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-15
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	2e-15
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-15
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-15
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-15
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-15
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	3e-15
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	4e-15
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	4e-15
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	5e-15
1spx_A	278	Short-chain reductase family member (5L265); paral	5e-15
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	7e-15
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	8e-15
1xhl_A	297	Short-chain dehydrogenase/reductase family member	8e-15
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	8e-15
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	8e-15
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	9e-15
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-14
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-14
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-14
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-14
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	1e-14
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-14
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-14
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-14
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-14
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-14
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-14
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-14
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-14
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	4e-14
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-14
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	4e-14
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	5e-14
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	5e-14
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-14
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-14
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	6e-14
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	7e-14
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	9e-14
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	9e-14
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	9e-14
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-13
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-13
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-13
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-13
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-13
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-13
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-13
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-13
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-13
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	3e-13
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-13
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	4e-13
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	5e-13
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	5e-13
4dqx_A	277	Probable oxidoreductase protein; structural genomi	5e-13
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	5e-13
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	5e-13
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	5e-13
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	6e-13
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	6e-13
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	7e-13
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	8e-13
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	8e-13
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	9e-13
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	9e-13
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	9e-13
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	9e-13
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	1e-12
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-12
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-12
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-12
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	1e-12
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-12
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-12
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-12
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-12
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-12
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-12
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-12
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	3e-12
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-12
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	4e-12
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	4e-12
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	5e-12
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	5e-12
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	6e-12
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	6e-12
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	7e-12
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	7e-12
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	8e-12
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	8e-12
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-11
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-11
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-11
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	3e-11
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-11
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-11
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-11
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-11
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	4e-11
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	5e-11
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	5e-11
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	5e-11
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	8e-11
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	9e-11
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-10
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-10
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-10
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-10
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-10
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	3e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	4e-10
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	5e-10
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	5e-10
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	6e-10
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	6e-10
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	7e-10
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	8e-10
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	9e-10
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	9e-10
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-09
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-09
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-09
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-09
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-09
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-09
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-09
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-09
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-09
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-09
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-08
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-08
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-08
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-08
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	3e-08
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-08
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	5e-08
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	6e-08
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	7e-08
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	8e-08
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	8e-08
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	9e-08
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-07
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-07
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-07
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-07
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-07
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	3e-07
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-07
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	8e-07
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-04
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-06
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-06
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-06
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-06
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	2e-06
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	6e-06
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	6e-06
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	6e-05
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-04

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  122 bits (309), Expect = 3e-34
 Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 17/109 (15%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           M+   A        +TV+ITG N+G+G VTA+ L   GA VIMA RD  K E  A  +  
Sbjct: 3   MTGWTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA- 61

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                       G+V +++LDL    S+R  A  ++       +LINNA
Sbjct: 62  ------------GQVEVRELDLQDLSSVRRFADGVSG----ADVLINNA 94

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 84.6 bits (210), Expect = 7e-20
 Identities = 14/82 (17%), Positives = 20/82 (24%), Gaps = 7/82 (8%)

Query: 130 GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG 189
           G  +   A HPG   T L              L            + GA+ TL+ A  + 
Sbjct: 187 GSPLRALAAHPGYSHTNLQGASGRKLG---DALMSAATRVVATDADFGARQTLYAASQDL 243

Query: 190 AAKE----TGLYYSDYKVAKSR 207
                      Y    +     
Sbjct: 244 PGDSFVGPRFGYLGRTQPVGRS 265

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  102 bits (256), Expect = 1e-26
 Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 11/98 (11%)

Query: 13  DGKTVIITGCNTGIGKVTAQTLYG-IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
                ++TG N GIG    + L       V++  RDV + +    +++           +
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA----------E 52

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                  +LD+   +SIR     + +    + +L+NNA
Sbjct: 53  GLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNA 90

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 69.7 bits (171), Expect = 2e-14
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 19/82 (23%)

Query: 124 LFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH 183
           L     G  + + A  PG V+T++                        K+PE+GA+T ++
Sbjct: 211 LSEQRKGDKILLNACCPGWVRTDMAG------------------PKATKSPEEGAETPVY 252

Query: 184 CA-LDEGAAKETGLYYSDYKVA 204
            A L   A    G + S+ +V 
Sbjct: 253 LALLPPDAEGPHGQFVSEKRVE 274

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 97.7 bits (243), Expect = 2e-24
 Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 10/152 (6%)

Query: 5   KAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEV 64
           +    +    +  ++TG N GIG    + L   G  V++ CRDV K      +++     
Sbjct: 3   ETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKN---- 58

Query: 65  ATSEDKKPGEVLIKKLDLAS-FKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSI 123
                     V+  +LD+     ++   A  I      + IL+NNA     S +   +  
Sbjct: 59  -----SNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKA 113

Query: 124 LFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY 155
           +   I   +  +  ++      EL     +  
Sbjct: 114 MISDIGEDSEELVKIYEKPEAQELMSETYELA 145

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 67.7 bits (165), Expect = 1e-13
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 19/74 (25%)

Query: 131 KNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA 190
               V  V PG+VKTE+   +                     T E+GA+  +  AL    
Sbjct: 255 PKFQVNCVCPGLVKTEMNYGI------------------GNYTAEEGAEHVVRIALFPDD 296

Query: 191 AKETGLYYSDYKVA 204
              +G +Y   +++
Sbjct: 297 G-PSGFFYDCSELS 309

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 78.4 bits (194), Expect = 1e-17
 Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)

Query: 2   SASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH 61
                    R   +  ++TG + GIG   A+ L   G KV+   R V   E  A+E +  
Sbjct: 20  GHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECK-- 77

Query: 62  FEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                     PG ++  + DL++ + I      I    + V I INNA
Sbjct: 78  ------SAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNA 119

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 78.4 bits (194), Expect = 1e-17
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L G+  ++TG + GIG++ AQ L   GA+V +  RD E    TA+ +  +         
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--------- 76

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+      DL+S    R  AQ + +  A + IL+NNA
Sbjct: 77  --GDCQAIPADLSSEAGARRLAQALGELSARLDILVNNA 113

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 77.6 bits (192), Expect = 1e-17
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
                  IITG + GIG V A  L   G +V++  R  +  E    EI +        +K
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMR-------SNK 56

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              E ++  LD+          +DI+Q    V IL+N A
Sbjct: 57  HVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAA 95

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 77.3 bits (191), Expect = 4e-17
 Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L G+  I+TG  TGIGK   + L  +G+ V++A R +E+ ++ A E++ +         
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK---- 70

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               V+  + ++ + + + +  +    T   ++ L+NN 
Sbjct: 71  -QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNG 108

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 76.9 bits (190), Expect = 6e-17
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 9/98 (9%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
             GK   ITG  TG+GK     L  +GA+ ++A R ++  + TA +I           + 
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS---------SQT 74

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +V   + D+     +++   ++ +   + +I+INNA
Sbjct: 75  GNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNA 112

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 75.7 bits (187), Expect = 1e-16
 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GK  +ITG +TGIGK  A      GA+V +A R  +  +  A EI            
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIA----------G 78

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+ L  + D+     +R     +      + I + NA
Sbjct: 79  VGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNA 117

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 74.8 bits (185), Expect = 1e-16
 Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GKT ++TG   G+G   A+ L   GA+VI+          +   +           +
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLT----------R 55

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           K  +      D+    +I      ++    +V ILINNA
Sbjct: 56  KGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNA 94

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 74.5 bits (184), Expect = 2e-16
 Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 7/102 (6%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
               L G+ +++TG   GIG   A+     GA V++  R        + +I+   +    
Sbjct: 8   HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPL 67

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                  ++   L+ A+ +  R+ A  +      +  L++NA
Sbjct: 68  -------IIALNLENATAQQYRELAARVEHEFGRLDGLLHNA 102

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 74.5 bits (184), Expect = 3e-16
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)

Query: 1   MSASKAVSAS--RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI 58
           M+ +    A   RLDGK  +ITG   GIG   A+     GA+++++ RDV + +     +
Sbjct: 5   MTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRAL 64

Query: 59  RKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                     ++   +V    +DLA   +  + A+   +    + +L+NNA
Sbjct: 65  G---------EQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNA 106

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 74.1 bits (183), Expect = 3e-16
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 10/101 (9%)

Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSE 68
           ++ +  K VIITG ++G+GK  A      GA+V++  R  EK E    EI +        
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF------- 53

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              PG++L  ++D+ +   I+   + I++    + ILINNA
Sbjct: 54  ---PGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNA 91

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 74.2 bits (183), Expect = 3e-16
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 10/100 (10%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           S L G+  ++TG + GIG   A+ L  +GA+V++  RDVEK      EI           
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV---------- 74

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              GE      DL+   +I   A  +        +L+NNA
Sbjct: 75  AAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNA 114

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 74.5 bits (184), Expect = 3e-16
 Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
            R   KTVIITG + GIG+ TA      GA V +  R  E+ E T   I K         
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILK-------SG 54

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               +V     D+ +            +    + +L+NNA
Sbjct: 55  VSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNA 94

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 73.7 bits (182), Expect = 4e-16
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RLD +  I+TG    IG      L   GA+VI+A  D   A     ++R           
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG-------- 61

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +V    +D+ + +S+++  + +++ E  V IL+  A
Sbjct: 62  --HDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACA 98

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 74.3 bits (183), Expect = 4e-16
 Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 12/112 (10%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIG---AKVIMACRDVEKAETTASE 57
           MS  +  +A RL  KTV+ITG + GIGK TA           K+I+A R +EK E     
Sbjct: 21  MSQGRK-AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKT 79

Query: 58  IRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           I + F           +V + +LD+   + I+   +++ Q   ++ IL+NNA
Sbjct: 80  IDQEF--------PNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNA 123

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 72.6 bits (179), Expect = 7e-16
 Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 9/97 (9%)

Query: 13  DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKP 72
           + K  +ITG + GIG+  A+ L   G  + +  R V++ E  A E+ +         ++ 
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ---------EQG 51

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            EV    LD++  +S+ + ++ + +   +V +++ NA
Sbjct: 52  VEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANA 88

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 73.4 bits (181), Expect = 7e-16
 Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 11/107 (10%)

Query: 3   ASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHF 62
           +S  V        T+ ITG  +G G+  A+     G  +++  R  E+ +  A E+    
Sbjct: 10  SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGEL---- 65

Query: 63  EVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                       VL   LD+    ++     ++ +  A +  LINNA
Sbjct: 66  -------SAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNA 105

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 73.1 bits (180), Expect = 8e-16
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           + G+ V+ITG   GIG++TA     + +K+++   +    E TA++ +            
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL---------- 78

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +V    +D ++ + I   A+ +     +V IL+NNA
Sbjct: 79  GAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNA 116

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 72.6 bits (179), Expect = 1e-15
 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 10/101 (9%)

Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSE 68
            S L GK  +ITG ++GIG+ TA+ L   GA V +A R VEK      E+          
Sbjct: 2   PSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELT--------- 52

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                +V + +LD+A  + +        +    + IL+NNA
Sbjct: 53  -AAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNA 92

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 73.1 bits (180), Expect = 1e-15
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 9/108 (8%)

Query: 2   SASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH 61
             ++      L GK VI+TG + GIG+  A  L  +GA V++  R  E  +   S   + 
Sbjct: 16  PLNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL 75

Query: 62  FEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                               +              +    + +LI N 
Sbjct: 76  G---------AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH 114

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 72.5 bits (179), Expect = 1e-15
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 10/109 (9%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           M+++       L+ K  ++T    GIG   A+ L   GA V+++ R  E  + T + ++ 
Sbjct: 1   MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQ- 59

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                     +   V      +   +               V IL++NA
Sbjct: 60  ---------GEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNA 99

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 72.2 bits (178), Expect = 2e-15
 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 9/99 (9%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            + GK  +ITG ++GIG   A+     GA +++  R V++    A  ++         +K
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLK---------EK 54

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               VL   +D+A+ + +    + +  +     IL+NNA
Sbjct: 55  FGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNA 93

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 72.1 bits (178), Expect = 2e-15
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RLDGK  IITG   GIGK  A T    GA V+++  + + A     EI+          +
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ----------Q 57

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+    + D+ S + +   A         V IL+NNA
Sbjct: 58  LGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNA 96

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 72.3 bits (178), Expect = 2e-15
 Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L  K   ITG  +GIG   A+     G   ++A R + +  T A ++             
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG---------AT 75

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               L   +D+ +  ++        +    + ILIN A
Sbjct: 76  GRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCA 113

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 71.8 bits (177), Expect = 2e-15
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 11/110 (10%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           M+ ++      L  KTV++TG   GIG    +   G GA +    R+  +     S+ + 
Sbjct: 1   MAGAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQ- 59

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQT-EANVHILINNA 109
                    KK  +V     D +         Q ++      + ILINN 
Sbjct: 60  ---------KKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNL 100

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 71.8 bits (177), Expect = 2e-15
 Identities = 21/99 (21%), Positives = 49/99 (49%), Gaps = 9/99 (9%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L G+  ++TG + G+G   AQ L   G  V++A R++E+A   A ++ +         K
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE---------K 68

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              E +  + D+++++ ++   + + +    +  ++N A
Sbjct: 69  YGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAA 107

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 71.8 bits (177), Expect = 2e-15
 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           +  K ++ITG + GIG+  A+ L   GAK+++  R   + E  A+EIR            
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIR----------DA 51

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            G  L + LD+    S+   AQ    T   + +L+NNA
Sbjct: 52  GGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNA 89

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 71.5 bits (176), Expect = 3e-15
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 10/109 (9%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
            S      +     +T  +TG ++GIG   A+TL   G  V    RD +        +R 
Sbjct: 11  SSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA 70

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                        +V     D+ S   +        +    + IL+N+A
Sbjct: 71  A----------GHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSA 109

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 71.5 bits (176), Expect = 4e-15
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 10/100 (10%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           +  D +  ++TG  +GIG   A+ L   G +V +  R  E   TT  E+R          
Sbjct: 18  ATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR---------- 67

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           +   E   +  D+ S   I      + +    V +L+NNA
Sbjct: 68  EAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNA 107

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 70.6 bits (174), Expect = 4e-15
 Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 7/102 (6%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
               L+ + +++TG + GIG+  A T    GA VI+  R+ EK    AS I +       
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE------- 58

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           E  +  +  I  L   + ++ +  AQ I      +  +++NA
Sbjct: 59  ETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNA 100

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 71.0 bits (175), Expect = 5e-15
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 11/100 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L+G T ++TG + GIG    + L  +GA V    R+ ++     ++ R           
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR----------S 55

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQT-EANVHILINNA 109
           K  +V     DL+S    ++    +       ++IL+NNA
Sbjct: 56  KGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNA 95

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 71.1 bits (175), Expect = 5e-15
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 7/100 (7%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           +R   K  IITG + GIG+ TA      GAKV +  R  E+ E T  +I           
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILA-------AG 54

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                V     D+ +     +           + IL+NNA
Sbjct: 55  VSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNA 94

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 70.2 bits (173), Expect = 7e-15
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           R + K  I+TG   GIG+  A+ L   GA V++A  + E AE  A +I            
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIV----------A 55

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G  +   +D++  +S +  A         +  L+NNA
Sbjct: 56  DGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNA 94

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 70.3 bits (173), Expect = 8e-15
 Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 4/100 (4%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL     ++TG  +GIG+  +  L G GA V     D   A+ T   +       + E  
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLG---GPGSKEGP 60

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQT-EANVHILINNA 109
             G     + D++  ++ R   + +         ++++ A
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCA 100

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 70.7 bits (174), Expect = 8e-15
 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 13/103 (12%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           +R  GK+VIITG + GIG+  A      GA+V +  R+ ++ E T  +I K         
Sbjct: 22  ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILK-------AG 74

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEAN---VHILINNA 109
               ++     D+            IN T A    + IL+NNA
Sbjct: 75  VPAEKINAVVADVTEAS---GQDDIINTTLAKFGKIDILVNNA 114

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 70.2 bits (173), Expect = 8e-15
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L+    I+TG   GIG+  A T    GA V++     E AE  A+ IR          +
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR----------Q 58

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+ +  + ++   +      +        + +L+NNA
Sbjct: 59  AGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNA 97

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 70.3 bits (173), Expect = 8e-15
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 8/99 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L     ++TG ++GIG  T + L   GA V    RD E+     S +R        +  
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALR--------QRF 56

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               +     D+     +R  A+   +T     IL+NNA
Sbjct: 57  PGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNA 95

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 70.2 bits (173), Expect = 9e-15
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L G T ++TG + GIG    + L G+GA+V    R+ ++ +      R          +
Sbjct: 18  SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR----------E 67

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQT-EANVHILINNA 109
           K   V     DL S        Q +    +  ++IL+NNA
Sbjct: 68  KGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNA 107

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 69.8 bits (172), Expect = 1e-14
 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L+ K  ++TG + GIG   A  L   GA V+        AE   + ++          +K
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMK----------EK 52

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +     L+++  +SI++   +I      + IL+NNA
Sbjct: 53  GFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNA 90

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 70.3 bits (173), Expect = 1e-14
 Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 9/99 (9%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L  ++V++TG   GIG+  A      GA V +A R   +  +  +E+          + 
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELG---------EL 88

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G V+  +LD++   S  D A+ +      + ++  NA
Sbjct: 89  GAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANA 127

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 69.9 bits (172), Expect = 1e-14
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
            + K  ++TG   GIG+  A+ L    + VI   R  +  ++   EI+            
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK----------SF 91

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             E      D++  + I +    I     NV IL+NNA
Sbjct: 92  GYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNA 129

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 69.9 bits (172), Expect = 1e-14
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            ++GK  ++TG   GIG+  A+ L   GAKV +   ++E      + + + FE       
Sbjct: 4   MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE------- 56

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            P + L  + D+A  + +RD  + +      + IL+NNA
Sbjct: 57  -PQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNA 94

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 70.5 bits (173), Expect = 1e-14
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 12/103 (11%)

Query: 15  KTVIITGCNTGIGKVTAQTL---YGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
             V+ITGC++GIG   A  L        KV    RD++             E A +    
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLW-------EAARALACP 55

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCIL 114
           PG +   +LD+   KS+    + +  TE  V +L+ NA   +L
Sbjct: 56  PGSLETLQLDVRDSKSVAAARERV--TEGRVDVLVCNAGLGLL 96

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 69.9 bits (172), Expect = 1e-14
 Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GK   +TG + GIG   A+     GA V +        E      + +         
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--------- 81

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                   K +++  KS+ +      +    + + + NA
Sbjct: 82  -GVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANA 119

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 69.5 bits (171), Expect = 1e-14
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 9/109 (8%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           M+A+ + + +R   + V+ITG  +G+G+ TA  L   GAK+ +     E  E + + +  
Sbjct: 1   MTATSSPT-TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVL- 58

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                  E     EVL    D++    +        +    +    NNA
Sbjct: 59  -------ETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNA 100

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 69.5 bits (171), Expect = 2e-14
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RLDG    +TG  +GIG    +     GA++I+  R+    +  A E+            
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA---------- 57

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                     D+   +++   A +  +  A V IL+N+A
Sbjct: 58  --AVAARIVADVTDAEAMTAAAAEA-EAVAPVSILVNSA 93

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 69.1 bits (170), Expect = 2e-14
 Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 9/99 (9%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L G++V++TG   GIG+  A      GA V +A R     +   +++ +          
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-------- 58

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+V+  + D++        A    +    + ++  NA
Sbjct: 59  -SGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANA 96

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 69.8 bits (171), Expect = 2e-14
 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 8/102 (7%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
           S     G+T  +TG   G+G    + L   G KV +A    +  +   + +         
Sbjct: 2   SLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLE-------- 53

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            +    EV+  +LD+AS +  +  A ++      V IL NNA
Sbjct: 54  AEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNA 95

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 69.1 bits (170), Expect = 2e-14
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 10/102 (9%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
           S   L  K VI+TG  +GIG+  A+      + V+      ++      E+R        
Sbjct: 1   SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR-------- 52

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                 EVL  K D++  K + +  +   +T + + +L NNA
Sbjct: 53  --GMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNA 92

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 68.7 bits (169), Expect = 2e-14
 Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 18/99 (18%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
              G   ++TG   GIG+ T + L+  GAKV+   R      + A E      V      
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVC----- 58

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    +DL  + +       I      V +L+NNA
Sbjct: 59  ---------VDLGDWDATEKALGGIGP----VDLLVNNA 84

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 68.8 bits (169), Expect = 3e-14
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 13/102 (12%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
           S S+   K  I+TG  +G+G+  A  L G G  V +A R ++  + TA+EI         
Sbjct: 22  SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI--------- 72

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                 + L    D+    S+R       +    V +L NNA
Sbjct: 73  ----GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNA 110

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 68.4 bits (168), Expect = 4e-14
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           + +GK  ++TG    IG  TA  L   G  + +   + E  E   + +R          +
Sbjct: 4   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVR----------E 53

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           K  E      D+ S +++      + +    +  L NNA
Sbjct: 54  KGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNA 92

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 68.0 bits (167), Expect = 4e-14
 Identities = 15/98 (15%), Positives = 34/98 (34%), Gaps = 13/98 (13%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           +    +I+TG  +G+G+     L   G +V M  R  ++ +     +             
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL------------- 47

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              V+    DLA  + +        +      ++++ A
Sbjct: 48  GNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCA 85

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 68.3 bits (168), Expect = 4e-14
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 10/98 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           LD +  I+TG + GIG+  A  L   GA VI        AE   +  +          + 
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK----------QA 75

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             E     L++    ++    +   +    +++L+NNA
Sbjct: 76  GLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNA 113

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 68.3 bits (168), Expect = 5e-14
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
               +T ++TG  +GIGK  A  L   GA V++  R+ +K      E+            
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANG----- 62

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G +  +  D+ +          +      +H +++ A
Sbjct: 63  --GAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCA 99

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 68.4 bits (168), Expect = 5e-14
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 14/113 (12%)

Query: 2   SASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRK 60
           S+      S ++    ++TG    IG+  A  L+  G +V++      E A + A E+ K
Sbjct: 11  SSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNK 70

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD-INQTEAN---VHILINNA 109
                    ++    ++ + DL +   +    ++ IN          +L+NNA
Sbjct: 71  ---------ERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA 114

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 67.9 bits (167), Expect = 5e-14
 Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 18/99 (18%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L G+ V++TG   GIG+ T Q L+  GA+V+   R     ++   E      V      
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVC----- 58

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    +DL  +++       +      V +L+NNA
Sbjct: 59  ---------VDLGDWEATERALGSVGP----VDLLVNNA 84

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 68.0 bits (167), Expect = 6e-14
 Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 9/104 (8%)

Query: 6   AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVA 65
           A      +G+  ++TG  TG+G+  AQ L   G  V++  R  +  +  A EI       
Sbjct: 25  AQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIG------ 78

Query: 66  TSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               +    V     D+     +      +    A + +L+NNA
Sbjct: 79  ---GRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNA 119

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 67.9 bits (167), Expect = 6e-14
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 10/100 (10%)

Query: 11  RLDGKTVIITG-CNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
            L GK V++T    TGIG  TA+     GA V+++     +   T  ++          D
Sbjct: 19  LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA---------D 69

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              G V     D+ S +++        +    + +L+NNA
Sbjct: 70  LGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNA 109

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 67.5 bits (166), Expect = 7e-14
 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 11/101 (10%)

Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSE 68
           ++RLDGK  IITG   GIG   A      GAKV++  R  +  E  A  +          
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---------- 50

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              P ++   + D +             +    V  L+NNA
Sbjct: 51  -GTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNA 90

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 67.8 bits (166), Expect = 9e-14
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 10/107 (9%)

Query: 3   ASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHF 62
            S     S  DG+  ++TG  +GIG  TA      GA+++++  D    E   + +R   
Sbjct: 20  GSMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ- 78

Query: 63  EVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                      +      D+     +   A +  +    V ++ +NA
Sbjct: 79  ---------GFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNA 116

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 67.2 bits (165), Expect = 9e-14
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L  K V+I+G    +G   A+     GA +++A R VE+ E  A ++            
Sbjct: 8   LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVT----------D 57

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                L    D+     +     +  +    V ++INNA
Sbjct: 58  TGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNA 96

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 67.2 bits (165), Expect = 9e-14
 Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 13/100 (13%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
            RL GKT+++TG  +GIG+         GA ++   R+        + +           
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE---------- 51

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               E +    D++  K++     +  +    +H + + A
Sbjct: 52  ---AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFA 88

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 67.0 bits (164), Expect = 1e-13
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 15/108 (13%)

Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTL---YGIGAKVIMACRDVEKAETTASEIRKHFEVA 65
           A  L     ++TG + G G+  A  L      G+ ++++ R          E+       
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELG------ 54

Query: 66  TSEDKKPGEVLIKKLDLASFKSIRDCAQDINQT----EANVHILINNA 109
               +   +V++   DL +   ++     + +          +LINNA
Sbjct: 55  --AQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNA 100

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 67.3 bits (165), Expect = 1e-13
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 10/108 (9%)

Query: 3   ASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKH 61
            ++ +    +  KT +ITG  +GIG   A+TL   GA +++      ++  T   E+   
Sbjct: 14  GTENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEV--- 70

Query: 62  FEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                      G VL    D+     I D    +        IL+NNA
Sbjct: 71  ------AGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNA 112

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
                  +ITG  +GIG+ TA  L   G  V    R   + E  A EI            
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIV----------G 74

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+ +  + D++    +R+  +D+     ++ I++ NA
Sbjct: 75  AGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANA 113

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 67.1 bits (164), Expect = 2e-13
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 5/96 (5%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
            K ++ITG ++G G++TA+ L G G +V  + RD+     +  E      +A        
Sbjct: 5   KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVE-----AIAGFARDNDV 59

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           ++   +LD+ S  S+      I   +  + +LI+NA
Sbjct: 60  DLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNA 95

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 66.0 bits (162), Expect = 2e-13
 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 12/100 (12%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
            RL  K  +ITG   GIG+  A+     GA + +A  D+  A    + IR          
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIA--DLVPAPEAEAAIR---------- 50

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                VL  K D++    +    + +  T     IL+NNA
Sbjct: 51  NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNA 90

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 66.4 bits (163), Expect = 2e-13
 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 11/110 (10%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIR 59
           + A      S    +   +TG   G+G   ++ L+  G  V ++     +   T     R
Sbjct: 12  LEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHER 71

Query: 60  KHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                         +     +D+A F+S   CA+ +      V +LINNA
Sbjct: 72  ----------DAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNA 111

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 66.0 bits (162), Expect = 2e-13
 Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL GKT ++TG   GIGK  A  L   GA VI++  + E A+  A+ I            
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI------------ 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +      D++   S++    +I      + IL+NNA
Sbjct: 51  -GKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNA 88

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 10/99 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDK 70
           L GK  ++TG  +GIG   A  L   GA +++    D  + E   + +           +
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGL---------AAQ 52

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +VL    DL+  +++R    +  +    + IL+NNA
Sbjct: 53  HGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNA 91

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 66.0 bits (162), Expect = 3e-13
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 11/100 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIM-ACRDVEKAETTASEIRKHFEVATSED 69
           +L GKT I+TG + G+GK  A  L  +GA +++         + TA E +          
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFK---------- 51

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                V++ K D+ + + + +  +        + IL+NNA
Sbjct: 52  AAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNA 91

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 66.0 bits (162), Expect = 3e-13
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 12/99 (12%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L G+T ++TG  +GIG+  A      GA V+   R  +  +  A EI            
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIA----------D 76

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G       DLA  +   + A+++  T   V +L+NNA
Sbjct: 77  GGGSAEAVVADLADLEGAANVAEELAATRR-VDVLVNNA 114

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 65.4 bits (160), Expect = 4e-13
 Identities = 19/101 (18%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSE 68
           +      TV + G    IG   A+     G  V    R+ EK     +EI          
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIE--------- 52

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               G ++ + LD  +   +           A + + I N 
Sbjct: 53  -AAGGRIVARSLDARNEDEVTAFLNAA-DAHAPLEVTIFNV 91

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 65.7 bits (161), Expect = 4e-13
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
               KT+I+TG N GIG    + +   GA V +  R    A     ++ K         +
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGK---------E 61

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +    + D+++   +    Q I+     +  LI NA
Sbjct: 62  FGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANA 100

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 65.2 bits (160), Expect = 5e-13
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 13/98 (13%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L+GK  ++TG + GIGK  A+ L   GAKVI        A+  +  +             
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG------------ 54

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                   L++ + +SI    + I      V IL+NNA
Sbjct: 55  -DNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNA 91

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 65.4 bits (160), Expect = 5e-13
 Identities = 21/100 (21%), Positives = 30/100 (30%), Gaps = 10/100 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L  K VI      GIG  T++ L     K  +    VE     A     + +       
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPK------- 54

Query: 71  KPGEVLIKKLDL-ASFKSIRDCAQDINQTEANVHILINNA 109
               +     D+       +   + I      V ILIN A
Sbjct: 55  --VNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGA 92

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 65.6 bits (161), Expect = 5e-13
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L+ +  I+TG  +GIG+ TA+     GA V++A  + + A   A+EI            
Sbjct: 24  DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI------------ 71

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +    ++D++S K      +        V +L+NNA
Sbjct: 72  -GSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNA 109

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 65.2 bits (160), Expect = 5e-13
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 13/100 (13%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           + L GKTVIITG   G+G   A+     GA+V++A    E+   TA E+           
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----------- 49

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                   + LD+   +  +       +   +V  L+NNA
Sbjct: 50  --GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNA 87

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 65.3 bits (160), Expect = 5e-13
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 13/98 (13%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L G+  ++TG   GIG+  A+  +  GA V +     +K +  A+++             
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL------------- 71

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +V +   +L+  KSI+  A+   +    + IL+NNA
Sbjct: 72  GKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNA 109

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 65.3 bits (160), Expect = 5e-13
 Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 11/110 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIM-ACRDVEKAETTASEIRKHFEVATSED 69
               +  +IT    G+GK   + L   G  V +    D    ET     +          
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYK---------- 53

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNIL 119
                +   + D+   + +    ++       +  LINNA   +     L
Sbjct: 54  DVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKL 103

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 64.9 bits (159), Expect = 6e-13
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 9/98 (9%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           + GK  ++T  ++G+G  +A  L   GA++++  R+ EK E  AS I             
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIA--------SLVS 56

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +V I   D+     I    +          IL+ + 
Sbjct: 57  GAQVDIVAGDIREPGDIDRLFEKARDLGG-ADILVYST 93

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 64.9 bits (159), Expect = 7e-13
 Identities = 22/100 (22%), Positives = 33/100 (33%), Gaps = 13/100 (13%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
               GK  I+ G   G+G  T + L   GA+V++  R+         E            
Sbjct: 4   GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----------- 52

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                V   + D+A    I        QT   + +L  NA
Sbjct: 53  --GPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINA 90

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 64.9 bits (159), Expect = 8e-13
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L+GK  +ITG  +G G+  A+     GAKV++  RD   AE  A EI            
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI------------ 53

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                L    D++    +    +        V IL+NNA
Sbjct: 54  -GDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNA 91

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 64.5 bits (158), Expect = 8e-13
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 13/100 (13%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
            RL+GK+ +ITG   GIG+  A+     GA V +A  D+E+A   A+EI           
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG---------- 53

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    ++D+    SI        +    + IL+NNA
Sbjct: 54  ---PAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNA 90

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 64.9 bits (159), Expect = 9e-13
 Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 10/100 (10%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           SRL+GK  I+TG ++GIG+  A      GAKV++  R+         EI           
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-------- 55

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              GE      D+          +   +    +    NNA
Sbjct: 56  --GGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNA 93

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 64.5 bits (158), Expect = 9e-13
 Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 11/100 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSED 69
            +  +   +TG   GIG    Q L+  G +V+  C  +  +      + +          
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK---------- 59

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               +    + ++  + S +     +      + +L+NNA
Sbjct: 60  ALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNA 99

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 64.1 bits (157), Expect = 9e-13
 Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 16/95 (16%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
             ++ITG ++G+G   A+     G    +  R   K  T  + +                
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS-------------NN 48

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           V  +  DLAS + +    +   Q ++    ++++A
Sbjct: 49  VGYRARDLASHQEVEQLFE---QLDSIPSTVVHSA 80

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 64.5 bits (158), Expect = 9e-13
 Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L G+  I+TG + GIG   A+ L   GA V +A  DV  A+   + +            
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----------- 57

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                   ++D+    S+    Q          +L  NA
Sbjct: 58  --NGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANA 94

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 64.5 bits (158), Expect = 1e-12
 Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 17/109 (15%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           M+  + +       K V+ITG ++GIG+  A+     G  +++  R VE+ +        
Sbjct: 4   MTGGQQM-GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP--- 59

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                          L  ++D+    +         +       ++NNA
Sbjct: 60  -------------NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNA 95

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 64.1 bits (157), Expect = 1e-12
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 11/101 (10%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKV-IMACRDVEKAETTASEIRKHFEVATSE 68
             L GK V+ITG + GIG  TA+     GAKV +   +     + T + +R         
Sbjct: 3   PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMR--------- 53

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               G+      DLA+ ++ +    +       + +LINNA
Sbjct: 54  -ADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNA 93

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 64.1 bits (157), Expect = 1e-12
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKV-IMACRDVEKAETTASEIRKHFEVATSEDK 70
           L  +  ++TG + GIG+  A  L   GAKV +        A+   + I            
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--------- 76

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             GE    K D++    +      + +    + +L+NNA
Sbjct: 77  -GGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNA 114

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 64.0 bits (157), Expect = 1e-12
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 9/98 (9%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GK  ++TG   GIG+  A+ L   G+ VI+     E+A+  A EI           K 
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIAN---------KY 55

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             +    +++L S +SI    ++I      + IL+NNA
Sbjct: 56  GVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNA 93

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 64.0 bits (157), Expect = 1e-12
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDK 70
           L GK  ++TG + GIG+  A  L   GA V++    + +KA     EI+          K
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIK----------K 51

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              + +  + D+A+ + + +  +        V IL+NNA
Sbjct: 52  LGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNA 90

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 63.7 bits (156), Expect = 1e-12
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 14/96 (14%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
              V+ITG + GIG+ TA+ L+  G +V +  RD ++ +  A+E+               
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL--------------E 50

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             L    D+            + +    +  L+NNA
Sbjct: 51  GALPLPGDVREEGDWARAVAAMEEAFGELSALVNNA 86

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 63.7 bits (156), Expect = 2e-12
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSED 69
            L+GK V+ITG +TG+GK  A       AKV++  R   ++A +   EI+          
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK---------- 53

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           K  GE +  K D+     + +  Q   +    + ++INNA
Sbjct: 54  KVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNA 93

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 63.3 bits (155), Expect = 2e-12
 Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 15/99 (15%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL  K V+ITG   GIG+ T +     GA+++    +       A  +            
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------------ 49

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    +D+A   S+     +       +  +++ A
Sbjct: 50  ---GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYA 85

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 63.3 bits (155), Expect = 2e-12
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 11/99 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKV-IMACRDVEKAETTASEIRKHFEVATSEDK 70
              K+ ++TG + GIG+  A  L   G  V +      EKAE    EI+           
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--------- 52

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +    + ++A    ++   +++     ++ +L+NNA
Sbjct: 53  -GVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNA 90

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 63.7 bits (156), Expect = 2e-12
 Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 13/100 (13%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           +RL GK  ++TG  +G+G    + L G GAKV  +  +    +  A+E+           
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----------- 50

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                 +  + D++S          + +    +++L+NNA
Sbjct: 51  --GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNA 88

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 63.7 bits (156), Expect = 2e-12
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 13/100 (13%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
            RL+ K  +ITG  +GIG   A+     GA+V +  R  +  +   +EI           
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----------- 73

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              G  +  + D A+   +    + +      + +L  NA
Sbjct: 74  --GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNA 111

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 12/98 (12%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GKT ++TG  +GIG   AQ L   GA +++            +EI +H          
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLN--GFGDPAPALAEIARH---------- 49

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             + +    DL+    I        +    V IL+NNA
Sbjct: 50  GVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNA 87

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 63.3 bits (155), Expect = 3e-12
 Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 14/102 (13%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
           + +R  GK V++TG   GIG    +     GA+V++  +D         E+         
Sbjct: 3   TGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL--------- 53

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                   +    D+     ++    +  +    +  ++NNA
Sbjct: 54  -----PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNA 90

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 17/114 (14%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIR 59
           M+ +   S    +    +ITG    IG   A  L+  G +V++  R     A+   +E+ 
Sbjct: 1   MNET---SHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAEL- 56

Query: 60  KHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD-INQTEAN---VHILINNA 109
                      + G  ++ K DL+   S+ DC +D I+ +        +L+NNA
Sbjct: 57  --------NAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNA 102

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 62.6 bits (153), Expect = 4e-12
 Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 17/102 (16%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAK-------VIMACRDVEKAETTASEIRKHFEVATS 67
             ++ITG   GIG+  A                ++++ R     E  + E R        
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR-------- 54

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +         D++    +R     I +   ++  L+NNA
Sbjct: 55  --AEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNA 94

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 62.6 bits (153), Expect = 4e-12
 Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 12/98 (12%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GKT ++TG   GIGK  A +L   GA V++  R  E    T  EIR  +  A      
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDA------ 61

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +     DL          QD+ +    V ILINN 
Sbjct: 62  --ILQPVVADL----GTEQGCQDVIEKYPKVDILINNL 93

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 62.6 bits (153), Expect = 5e-12
 Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 12/102 (11%)

Query: 11  RLDGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATS 67
            L GK V++TG +   G+G   A+    +GA V +      + AE    E+ K + +   
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI--- 73

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                 +    K  + S++S     +D+      +   I NA
Sbjct: 74  ------KAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANA 109

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 62.6 bits (153), Expect = 5e-12
 Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 13/108 (12%)

Query: 2   SASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH 61
               +++   L GK  I+TG   GIG   A+ L   G  V+ A  D + A+  A++I   
Sbjct: 17  QGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--- 73

Query: 62  FEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                            ++D++  + I             V  L+ NA
Sbjct: 74  ----------GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANA 111

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 62.9 bits (153), Expect = 6e-12
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 3/102 (2%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATS 67
           +  RL G TV ITG + GIGK  A      GA +++A +  +        I   +  A  
Sbjct: 39  NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTI---YTAAEE 95

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            +   G+ L   +D+   + I    +   +    + IL+NNA
Sbjct: 96  IEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNA 137

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 62.2 bits (152), Expect = 6e-12
 Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 11/101 (10%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIM-ACRDVEKAETTASEIRKHFEVATSE 68
           ++      I+TG   GIG   A+ L   G  + +    D E      +E+          
Sbjct: 25  TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELS--------- 75

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                 V+  + DLA   S +     +      +  L+NNA
Sbjct: 76  -GLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNA 115

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 62.2 bits (152), Expect = 7e-12
 Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 17/111 (15%)

Query: 2   SASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH 61
           +++   S +RL  K  IITG   GIG+ TA+     GAKV++A    +  +   + I   
Sbjct: 4   TSTPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI--- 60

Query: 62  FEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEAN---VHILINNA 109
                     P  +     D+   +   D    ++ T A    + I+  N 
Sbjct: 61  --------GSPDVISFVHCDVTKDE---DVRNLVDTTIAKHGKLDIMFGNV 100

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 62.2 bits (152), Expect = 7e-12
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 20/109 (18%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           M             K  I+TG ++GIG      L   GAKV+    D +     +   + 
Sbjct: 1   MGHHHHHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK- 59

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                              +D+ + + +++  +   +    + IL+NNA
Sbjct: 60  -------------------IDVTNEEEVKEAVEKTTKKYGRIDILVNNA 89

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 61.8 bits (151), Expect = 8e-12
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDK 70
              K  ++TG + G+GK  A  L   G  +++   R  + A  TA EI           K
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE----------K 51

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +VL+ K ++     I++  Q I++T   + + +NNA
Sbjct: 52  LGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNA 90

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 61.8 bits (151), Expect = 8e-12
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 13/93 (13%)

Query: 17  VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVL 76
           V++TG   G G+   +     G KVI   R  E+ +    E+                + 
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-------------GDNLY 49

Query: 77  IKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           I +LD+ +  +I +    +     N+ IL+NNA
Sbjct: 50  IAQLDVRNRAAIEEMLASLPAEWCNIDILVNNA 82

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL GK  +++G   G+G    + +   GAKV+      E+ +  A+E+            
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL------------ 51

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    LD+      +            +H+L+NNA
Sbjct: 52  -ADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNA 89

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 61.0 bits (149), Expect = 1e-11
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 19/100 (19%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
            RLDGK +I+T    GIG+  A      GAKVI    +  K +                 
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY------------ 49

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                +  + LD+   K I   A ++ +    + +L N A
Sbjct: 50  ---PGIQTRVLDVTKKKQIDQFANEVER----LDVLFNVA 82

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 61.4 bits (150), Expect = 1e-11
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L+ K  IITG   GIG  T++ L   GA+V++A          A+ +            
Sbjct: 8   ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV------------ 55

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                +   +DL +  S+R        T   + I+ NNA
Sbjct: 56  -GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNA 93

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 60.2 bits (147), Expect = 3e-11
 Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 17/109 (15%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           M+         L GKT +ITG ++GIG   A+ L+ +G+KVI++  + EK ++  + +  
Sbjct: 1   MAHHHHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-- 58

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                           I+  +LA+ +   +     +     + IL+ NA
Sbjct: 59  -----------KDNYTIEVCNLANKEECSNLISKTSN----LDILVCNA 92

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 16/100 (16%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGI---GAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
            +++ITGCN G+G    + L  +      +   CR+ E+A+      + H          
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNH---------- 71

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHI--LINNA 109
              + I ++DL +F +      DI     +  +  L NNA
Sbjct: 72  -SNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNA 110

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 59.9 bits (146), Expect = 3e-11
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           +L  +  I+TG ++G+G    + L   GA V+         E  A+E+            
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL------------ 51

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               V  +  D+ +            Q   +VH L+N A
Sbjct: 52  -GAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCA 89

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 59.8 bits (146), Expect = 3e-11
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K  ++TG   GIGK  A  L   G  V +A  +   A+  ASEI           +  G 
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN----------QAGGH 52

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            +  K+D++    +    +   +T     +++NNA
Sbjct: 53  AVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNA 87

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 59.9 bits (146), Expect = 4e-11
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           +L G+  +ITG  +G+G+         GA+V +  +  E+                    
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH------------ 49

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G  +    D+ S +  +  A+        +  LI NA
Sbjct: 50  -GGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNA 87

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 59.7 bits (145), Expect = 4e-11
 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 17/99 (17%)

Query: 15  KTVIITGCNTGIGKVTAQTL--YGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKP 72
            +V++TG N GIG    Q L        +I   RDVEKA    S              K 
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-------------KD 50

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHI--LINNA 109
             V +  L +   KS+      + +   +  +  LINNA
Sbjct: 51  SRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNA 89

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 59.6 bits (145), Expect = 5e-11
 Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 11/101 (10%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           + ++G+  ++TG + GIG+  A  L   GA V +  R ++     A E +          
Sbjct: 1   APMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQ---------- 50

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEAN-VHILINNA 109
              G+ +    D +    +R   + +++ +   + +L+NNA
Sbjct: 51  SLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNA 91

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 59.5 bits (145), Expect = 5e-11
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 19/99 (19%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           R   K V+ITG + GIG    +       +V+   R ++ +                   
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----------------- 67

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              ++     D++  ++     ++  +    +  L+NNA
Sbjct: 68  --PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNA 104

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 59.5 bits (145), Expect = 5e-11
 Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 11/103 (10%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVAT 66
           S  R   +T+++ G    IG+  A      GA V++      E A T  +EI        
Sbjct: 2   SLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE------- 54

Query: 67  SEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              K     L  K DL +   +             +H L++ A
Sbjct: 55  ---KLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVA 94

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 59.2 bits (144), Expect = 8e-11
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 13/100 (13%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K  ++TG ++G G+  A+     G  VI   R  E              +       P  
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEA-------------LDDLVAAYPDR 52

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCIL 114
                LD+   + I   A D+      V +L+NNA    +
Sbjct: 53  AEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQV 92

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 58.7 bits (143), Expect = 9e-11
 Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 11/96 (11%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPG 73
             V++TG + GIGK  A +L   G KV++   R  + AE  + +I  +           G
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY----------GG 51

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           + +    D++    +    +        + +++NNA
Sbjct: 52  QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNA 87

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 58.3 bits (142), Expect = 1e-10
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 16/100 (16%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
               GK V++TG   GIG+  AQ     GA V +      + +  A  I   F       
Sbjct: 2   GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR-PEGKEVAEAIGGAF------- 53

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    ++DL   +      ++       V +L+NNA
Sbjct: 54  --------FQVDLEDERERVRFVEEAAYALGRVDVLVNNA 85

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 58.3 bits (142), Expect = 1e-10
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 22/110 (20%)

Query: 1   MSASKAVSAS-RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR 59
           M+A+    A      ++V++TG N GIG   AQ L   G KV +                
Sbjct: 1   MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAV---------------- 44

Query: 60  KHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                       P  +   ++D+    ++      + + +  V +L++NA
Sbjct: 45  ----THRGSG-APKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA 89

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 9/96 (9%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG 73
            +  I+TG ++G G   A      G +V       E  E TA                  
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH---------AYAD 52

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           +VL  + D+A    +        +    + +L+NNA
Sbjct: 53  KVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNA 88

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            + G   +ITG  +G+G  TA+ L G GA  ++        E  A ++            
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------------ 56

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                +    D+ S K ++            V + +N A
Sbjct: 57  -GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 94

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 10/96 (10%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPG 73
           +  +ITG + GIG+  A  L   G  + +   ++ EKAE  A E R+             
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPL-------- 53

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            V +   +L   ++         +    +  L+NNA
Sbjct: 54  -VAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNA 88

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 57.2 bits (139), Expect = 3e-10
 Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 12/98 (12%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMA--CRDVEKAETTASEIRKHFEVATSEDKK 71
            K  ++TG   GIG+  ++ L   G  + +A   +  E+A  T   I             
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIE----------AA 51

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             + +   LD+    +      +  +      +L+NNA
Sbjct: 52  DQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNA 89

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 57.2 bits (138), Expect = 4e-10
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 18/98 (18%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           + GK  ++      +G  +A  L G GA+V++  R ++KA+  A  + K F+V       
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVN------ 170

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                +   + A   S  +  +         H +    
Sbjct: 171 -----VTAAETADDASRAEAVKG-------AHFVFTAG 196

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 56.9 bits (138), Expect = 5e-10
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 3/99 (3%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GKT+ I+G + GIG   A+ +   GA V +  +  E        I   +  A   ++
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTI---YTAAKEIEE 62

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+ L    D+    ++        +    + I +NNA
Sbjct: 63  AGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNA 101

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 56.5 bits (137), Expect = 5e-10
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 15/98 (15%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIM--ACRDVEKAETTASEIRKHFEVATSEDKK 71
           GK +++TG + GIGK     L+ +    ++    R     +    +              
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY------------- 48

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    D+     ++       +    +  L+ NA
Sbjct: 49  GDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANA 86

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 56.4 bits (137), Expect = 6e-10
 Identities = 13/95 (13%), Positives = 28/95 (29%), Gaps = 16/95 (16%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
            T I+T      G  +A  L   G  V       ++ +   +    +             
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYP------------ 49

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               +L   S +   +  + +      V +L++N 
Sbjct: 50  ----QLKPMSEQEPAELIEAVTSAYGQVDVLVSND 80

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 56.5 bits (137), Expect = 6e-10
 Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L GKT+ ITG + GIG   A      GA V +A +           I      A + + 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTI---HSAAAAVNA 59

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+ L  K D+     +R        T   + IL+NNA
Sbjct: 60  AGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNA 98

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 56.4 bits (137), Expect = 7e-10
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 16/112 (14%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVI---MACRDVEKAETTASE 57
           MS +       L  K ++I G    +G +TA+T       ++      +D + A     E
Sbjct: 1   MSLT---KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDE 57

Query: 58  IRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           +            +  +V + + DL++ + +        +    V I IN  
Sbjct: 58  LE----------DQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTV 99

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 56.0 bits (136), Expect = 8e-10
 Identities = 20/99 (20%), Positives = 31/99 (31%), Gaps = 20/99 (20%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
              GK V +TG   GIG  TA      GAKV    +   + +                  
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ------------------ 45

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                  + +D+A    +    Q +      +  L+N A
Sbjct: 46  --YPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAA 82

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 56.0 bits (136), Expect = 9e-10
 Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 21/106 (19%)

Query: 4   SKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFE 63
           S  +       ++V++TG N GIG   A+     G KV +  R  E  E           
Sbjct: 11  SSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE----------- 59

Query: 64  VATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                       L  K D+   + +    ++I +T   V +LI NA
Sbjct: 60  ----------GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANA 95

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 56.3 bits (136), Expect = 9e-10
 Identities = 14/109 (12%), Positives = 33/109 (30%), Gaps = 9/109 (8%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVA--- 65
           +       ++TG    +G+  A+ L+  G  V +       +A   ++ +      +   
Sbjct: 42  TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101

Query: 66  -----TSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                ++    P         +  F    +             +L+NNA
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNA 150

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 21/100 (21%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           S L  K VI+TG + GIG+  A+     G+KVI      +  E     I           
Sbjct: 4   SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH-DPGEAKYDHIE---------- 52

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                      D+ +   ++     I +   ++ +L+NNA
Sbjct: 53  ----------CDVTNPDQVKASIDHIFKEYGSISVLVNNA 82

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 55.8 bits (135), Expect = 1e-09
 Identities = 14/109 (12%), Positives = 33/109 (30%), Gaps = 9/109 (8%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVA--- 65
           +       ++TG    +G+  A+ L+  G  V +       +A   ++ +      +   
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

Query: 66  -----TSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                ++    P         +  F    +             +L+NNA
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNA 113

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 15/99 (15%), Positives = 27/99 (27%), Gaps = 17/99 (17%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L  K  ++TG   G+G    + L        +  R+ E     A               
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALG-RNPEHLAALAEIEG----------- 49

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               V   + D+            +   +  V  L++ A
Sbjct: 50  ----VEPIESDIVKEVLEEGGVDKLKNLDH-VDTLVHAA 83

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 2   SASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRK 60
           S+  + ++  L GK  + TG   GIG+  A  L   GA V++      + AE   +E++ 
Sbjct: 9   SSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELK- 67

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    K   + +  + D++    +             +  +++N+
Sbjct: 68  ---------KLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNS 107

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           + +G + I++G   G+G+ T + L+  G  V++A    EK +  A E+            
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL------------ 74

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                     ++ S  S+    +  NQ     + ++ + 
Sbjct: 75  -GNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHG 112

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 15/99 (15%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L    ++ITG +  +G   A  L   G +VI++ R       + +E+R+          
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYR---TEHASVTELRQ---------- 70

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                +    D +    I      +    +++  +++NA
Sbjct: 71  --AGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNA 107

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 21/100 (21%), Positives = 30/100 (30%), Gaps = 21/100 (21%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
              +GK  ++TG   GIG      L   GA+V +A R V                     
Sbjct: 24  QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------------- 66

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                 L    DL            +      + I++NNA
Sbjct: 67  ----ADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNA 102

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 22/111 (19%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA--CRDV----------EKAETTASEI 58
           RL GK   ITG   G G+  A  L   GA ++    CR            E+ + T   +
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102

Query: 59  RKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            +              ++ ++ D+    S++    +      ++ IL++N 
Sbjct: 103 EEQ----------GRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNV 143

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 11/110 (10%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIR 59
           +       ++ L+GK  ++TG   GIG+  A  L   G KVI+      E AE   + I+
Sbjct: 16  IPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK 75

Query: 60  KHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                     K   +    K ++   + I    ++  +    + I+ +N+
Sbjct: 76  ----------KNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNS 115

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 53.3 bits (129), Expect = 7e-09
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 11/109 (10%)

Query: 2   SASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRK 60
           + +    +     K  I+TG + GIG   A  L   G  V++        AE  A +I  
Sbjct: 15  TENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE- 73

Query: 61  HFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                       G+ L  + D++   ++R       +    V +L+NNA
Sbjct: 74  ---------AAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNA 113

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 11/110 (10%)

Query: 1   MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIR 59
            +AS+     RLDGK  ++TG   GIG   A  L  +GAKV++      + AE   SEI+
Sbjct: 5   ENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK 64

Query: 60  KHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                         + +  K D+     I            ++ I ++N+
Sbjct: 65  ----------ALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNS 104

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 11/101 (10%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSE 68
           S  D   V++TG + GIG    +     G +V +    + E A+   + I          
Sbjct: 22  SMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT--------- 72

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
            +  GE +    D+ +   I      +++    +  L+NNA
Sbjct: 73  -ESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNA 112

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 31/101 (30%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           +  K V++   + GIG+  A  L   GA+V +  R+ E  + +         V       
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY----VVC------ 66

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEAN---VHILINNA 109
                             D  +D++        V IL+ NA
Sbjct: 67  ------------------DLRKDLDLLFEKVKEVDILVLNA 89

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 14/99 (14%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           LDGK  ++TG   GIG   A+     GA V+    DV+ A      +          DK 
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVV--AIDVDGAAEDLKRV---------ADKV 259

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTE-ANVHILINNA 109
            G  L   LD+ +  ++      + +     V IL+NNA
Sbjct: 260 GGTAL--TLDVTADDAVDKITAHVTEHHGGKVDILVNNA 296

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 17/109 (15%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVAT 66
           + S L GK  ++TG + GIG+  A+ L   GA V +      E+AE T  EI+       
Sbjct: 1   ANSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ------- 53

Query: 67  SEDKKPGEVLIKKLDLASFKSIRDCAQDINQT------EANVHILINNA 109
                 G       +L S   +      ++             ILINNA
Sbjct: 54  ---SNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNA 99

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 51.0 bits (123), Expect = 4e-08
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 11/103 (10%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVAT 66
           ++  L GKT  +TG + GIG   A+ L   GA V +      E+A+   SEI        
Sbjct: 25  TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE------- 77

Query: 67  SEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +  G  +  + D    ++I    ++  +    + IL+N+A
Sbjct: 78  ---QAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSA 117

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 50.2 bits (121), Expect = 5e-08
 Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 21/94 (22%)

Query: 16  TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEV 75
            V+ITG   G+G   A+ L   G  ++++ R        A E+                 
Sbjct: 2   RVLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVG-------------ARA 46

Query: 76  LIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           L    DLA     +   ++       + +L++  
Sbjct: 47  L--PADLADELEAKALLEEAGP----LDLLVHAV 74

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 50.7 bits (122), Expect = 6e-08
 Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 2/101 (1%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA--CRDVEKAETTASEIRKHFEVATSE 68
            L GK   ITG   G G+  A  L   GA +I    C  +       +   +        
Sbjct: 10  PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV 69

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           +     ++ ++ D+   +S+    Q        + I++ NA
Sbjct: 70  EDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANA 110

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 50.4 bits (121), Expect = 7e-08
 Identities = 11/107 (10%), Positives = 25/107 (23%), Gaps = 22/107 (20%)

Query: 3   ASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHF 62
           +S  V       K +++ G +  +G    +         I            +       
Sbjct: 11  SSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSF------ 64

Query: 63  EVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                            +  +  + I+   + IN     V   +  A
Sbjct: 65  ----------------TIKDSGEEEIKSVIEKINSKSIKVDTFVCAA 95

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 50.3 bits (121), Expect = 8e-08
 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 2/104 (1%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA--CRDVEKAETTASEIRKHFEVA 65
           S  R+  K V++TG   G G+  A  L   GA +I+   C D+E  E   +  R   E  
Sbjct: 4   SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAG 63

Query: 66  TSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +K   +    ++D+    ++     +       + +++ NA
Sbjct: 64  LEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANA 107

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 50.2 bits (121), Expect = 8e-08
 Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 23/115 (20%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA--CRDV-----------EKAETT 54
            A  L G+   ITG   G G+  A  L   GA +I    C  V           E  + T
Sbjct: 9   QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDET 68

Query: 55  ASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           A  +               + L + LD+    ++R+   D  +    + +++ NA
Sbjct: 69  ARLVEDQ----------GRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANA 113

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 50.2 bits (121), Expect = 9e-08
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 25/98 (25%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           +  ++TG + GIG+  A+ L   G +V +A R+ E+A  +                    
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL------------------G 44

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEAN---VHILINNA 109
            +    DL       D    + +       +H+L++ A
Sbjct: 45  AVPLPTDL----EKDDPKGLVKRALEALGGLHVLVHAA 78

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 50.2 bits (121), Expect = 1e-07
 Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 22/114 (19%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIM--ACRDV----------EKAETTA 55
           S +  +GKT +ITG   G+G+  A  L   GA + +   C +           +    T 
Sbjct: 4   SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETV 63

Query: 56  SEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           + + K               +  K+D+    ++     +   T   + I I NA
Sbjct: 64  ALVEKT----------GRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNA 107

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 22/111 (19%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA--CRDV----------EKAETTASEI 58
           +++GK   ITG   G G+  A TL   GA +I    C+ +          +    T  ++
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84

Query: 59  RKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                           ++  ++D+  F +++    D       + I++ NA
Sbjct: 85  EAL----------GRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANA 125

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 28/119 (23%)

Query: 3   ASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIM---------ACRDVEKAET 53
            S +    R DG+  ++TG   G+G+  A      GAKV++                A+ 
Sbjct: 8   MSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI 67

Query: 54  TASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEAN---VHILINNA 109
              EIRK    A                +A + S+ D A+ I         V IL+NNA
Sbjct: 68  VVDEIRKAGGEA----------------VADYNSVIDGAKVIETAIKAFGRVDILVNNA 110

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 19/112 (16%), Positives = 35/112 (31%), Gaps = 23/112 (20%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA--CRDV-----------EKAETTASE 57
           +L+G+   ITG   G G+  A  +   GA +I       +           +    T   
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67

Query: 58  IRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           +                ++   +D   F  +R    D       + I++ NA
Sbjct: 68  VEAA----------NRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANA 109

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 15/97 (15%), Positives = 26/97 (26%), Gaps = 23/97 (23%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKP 72
               ++TG + GIGK   + L       ++        +      I              
Sbjct: 4   MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFI-------------- 49

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                 K DL   + I +    I     +   +  NA
Sbjct: 50  ------KADLTKQQDITNVLDII--KNVSFDGIFLNA 78

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 17/99 (17%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            +     ++TG  +G+G  T + L   GA+V++   D+ + E   +++            
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVL--DI-RGEDVVADL------------ 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                     D+    ++   A D+ +T   + I++N A
Sbjct: 51  -GDRARFAAADVTDEAAVAS-ALDLAETMGTLRIVVNCA 87

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 48.3 bits (116), Expect = 4e-07
 Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 11/110 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVATSED 69
           +L GK V+ITG ++GIG+  +      GA + +A  D    A  T   +           
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE---------- 93

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNIL 119
           K+  + ++   DL+  +  +D  Q+  +   +++IL+NN         + 
Sbjct: 94  KEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLE 143

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 48.2 bits (115), Expect = 8e-07
 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 28/114 (24%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVI---------MACRDVEKAETTASEI 58
           S      K VIITG   G+GK  +     +GAKV+             + + A+    EI
Sbjct: 2   SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEI 61

Query: 59  RKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEAN---VHILINNA 109
            K+  VA                +A + ++ D  + +     N   VH++INNA
Sbjct: 62  VKNGGVA----------------VADYNNVLDGDKIVETAVKNFGTVHVIINNA 99

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 22/103 (21%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L  K V+ITG   G+GK  A+     GAKV++   D + A  T  EI+           
Sbjct: 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVN--DFKDATKTVDEIK----------A 366

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEAN----VHILINNA 109
             GE             +   ++ I +   +    + IL+NNA
Sbjct: 367 AGGEA------WPDQHDVAKDSEAIIKNVIDKYGTIDILVNNA 403

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 28/111 (25%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVI---------MACRDVEKAETTASEIRKH 61
           R DG+ V++TG   G+G+  A      GA V+            +    A+    EIR+ 
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 62  FEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEAN---VHILINNA 109
              A                +A++ S+    + +         + +++NNA
Sbjct: 66  GGKA----------------VANYDSVEAGEKLVKTALDTFGRIDVVVNNA 100

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 12/103 (11%), Positives = 30/103 (29%), Gaps = 22/103 (21%)

Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSE 68
           A+  + + V++ G    +G    Q        V     DV + E  ++ +      + +E
Sbjct: 2   AASGEARRVLVYGGRGALGSRCVQAFRARNWWVASI--DVVENEEASASVIVKMTDSFTE 59

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEAN--VHILINNA 109
                                    ++ +   +  V  ++  A
Sbjct: 60  Q------------------ADQVTAEVGKLLGDQKVDAILCVA 84

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 26/115 (22%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA--CRDV--------------EKAETT 54
           R++GK   +TG   G G+  A  L   GA +I    C+ +              E    T
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67

Query: 55  ASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
           A  ++ H             ++  ++D+  + +++       +    + I++ NA
Sbjct: 68  ADLVKGH----------NRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANA 112

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 12/99 (12%), Positives = 27/99 (27%), Gaps = 24/99 (24%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPG 73
              ++T      G    + L   G  V+       + AE    E      +A +E     
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQ---- 57

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEAN---VHILINNA 109
                              + ++ T  +   +  +++N 
Sbjct: 58  ----------------KPERLVDATLQHGEAIDTIVSND 80

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 20/110 (18%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVI----------MACRDVEKAETTASEIR 59
             +DG+ VI+TG   GIG+  A      GA+V+                  A++   EI 
Sbjct: 23  GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEIT 82

Query: 60  KHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                        GE +    ++A +       Q   +T   + +L+NNA
Sbjct: 83  ----------AAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNA 122

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 45.0 bits (107), Expect = 6e-06
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 26/95 (27%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
             ++I+GC TGIG  T + L   G +++    D+  AE  A       +++T+E +K   
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGI--DIRDAEVIA-------DLSTAEGRK--- 49

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                         +  A  + +    +  L+  A
Sbjct: 50  --------------QAIADVLAKCSKGMDGLVLCA 70

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 44.9 bits (107), Expect = 6e-06
 Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 12/113 (10%)

Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK--AETTASEIRKHFEVAT 66
           + RL  +  ++TG ++GIG+  A      GA V +     E+  A+   + I        
Sbjct: 44  SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE------- 96

Query: 67  SEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNIL 119
              +   + ++   DL+     R       +    + IL   A        I 
Sbjct: 97  ---ECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIK 146

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 41.9 bits (99), Expect = 6e-05
 Identities = 10/103 (9%), Positives = 22/103 (21%), Gaps = 28/103 (27%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           +    VI+ G    +G    +     G  V+                         +   
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN------------------DQAD 42

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEA-----NVHILINNA 109
              ++    +             + QT +      V  +   A
Sbjct: 43  SNILVDGNKNWTEQ-----EQSILEQTASSLQGSQVDGVFCVA 80

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 13/44 (29%), Positives = 16/44 (36%)

Query: 15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI 58
            + ITG  +GIG    + L   G  VI   R     E   S  
Sbjct: 2  SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTP 45

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	222
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.98
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.98
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.98
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.98
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.98
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.98
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.98
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.98
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.98
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.97
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.97
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.97
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.97
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.97
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.97
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.97
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.97
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.97
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.97
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.97
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.97
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.97
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.97
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.97
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.97
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.97
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.97
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.97
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.97
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.97
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.97
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.97
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.97
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.97
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.97
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.97
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.97
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.97
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.97
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.97
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.97
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.97
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.97
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.97
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.97
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.97
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.97
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.97
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.97
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.97
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.97
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.97
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.97
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.97
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.97
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.97
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.97
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.96
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.96
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.96
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.96
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.96
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.96
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.96
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.96
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.96
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.96
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.96
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.96
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.96
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.96
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.96
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.96
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.96
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.96
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.96
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.96
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.96
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.96
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.96
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.96
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.96
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.96
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.96
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.96
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.96
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.96
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.96
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.96
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.96
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.96
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.96
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.96
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.96
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.96
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.96
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.96
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.96
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.96
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.96
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.96
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.96
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.96
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.96
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.96
1spx_A	278	Short-chain reductase family member (5L265); paral	99.95
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.95
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.95
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.95
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.95
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.95
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.95
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.95
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.95
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.95
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.95
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.95
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.95
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.95
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.95
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.95
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.95
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.95
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.95
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.95
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.95
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.95
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.95
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.95
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.94
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.94
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.94
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.94
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.94
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.94
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.94
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.94
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.94
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.94
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.94
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.94
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.94
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.94
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.94
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.94
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.94
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.94
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.94
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.94
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.94
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.94
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.93
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.93
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.93
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.93
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.93
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.93
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.93
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.93
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.93
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.93
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.93
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.93
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.93
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.93
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.93
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.93
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.93
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.92
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.92
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.92
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.92
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.92
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.92
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.92
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.92
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.91
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.91
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.91
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.91
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.91
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.91
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.89
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.88
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.87
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.85
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.84
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.84
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.84
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.84
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.8
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.78
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.77
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.75
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.74
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.74
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.71
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.7
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.66
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.65
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.6
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.6
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.59
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.53
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.48
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.48
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.48
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.47
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.46
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.46
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.45
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.4
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.37
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.37
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.35
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.3
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.28
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.28
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.28
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.26
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.26
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.25
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.25
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.24
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.24
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.21
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.21
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.2
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.2
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.19
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.17
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.16
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.14
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.14
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.14
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.13
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.12
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.12
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.1
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.09
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.08
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.08
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.07
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.07
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.06
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.06
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.06
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.04
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.03
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.02
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.02
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.0
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	98.99
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	98.99
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	98.98
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	98.98
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.98
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	98.97
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.97
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	98.97
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	98.96
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.94
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.93
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.91
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.88
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.87
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	98.87
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	98.87
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.86
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	98.86
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	98.86
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.86
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.86
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.86
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	98.83
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	98.83
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	98.82
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.82
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.82
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.81
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	98.81
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	98.8
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.79
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	98.79
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.79
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.74
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	98.73
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.64
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.62
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.56
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.55
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.54
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.53
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.52
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.48
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.39
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.39
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.36
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.35
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.34
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.31
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.31
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.31
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.29
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.28
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.26
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.25
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.23
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.21
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.21
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.19
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.19
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.07
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.05
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.01
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.96
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.88
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.87
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.86
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.84
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.83
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.82
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	97.82
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.8
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.78
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.78
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.73
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.72
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.69
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.69
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.68
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.66
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.64
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.63
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	97.63
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.62
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.61
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.58
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.56
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.55
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.51
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.51
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.48
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.44
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.44
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.43
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.41
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.39
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.38
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.36
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.27
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.26
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.23
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.2
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.15
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.14
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.07
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.03
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.03
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.03
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.99
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.99
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.98
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.97
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.94
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.94
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.93
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.92
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	96.92
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.9
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.89
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.89
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.83
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.83
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.81
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.77
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.76
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.76
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	96.75
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.74
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.74
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	96.73
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.73
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.7
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.67
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.66
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	96.65
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.59
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.57
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.55
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.54
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.53
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.52
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.5
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.48
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.48
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.39
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.38
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.38
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.33
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.33
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.32
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.31
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.29
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.25
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.22
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.22
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.21
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.2
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.16
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.15
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.14
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.12
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.1
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.06
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.06
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.01
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.99
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.99
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.98
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.96
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.94
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	95.93
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.91
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	95.91
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.89
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.82
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.81
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.8
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.78
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	95.77
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	95.76
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.76
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.72
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.69
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.69
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.68
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.66
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.64
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.62
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.55
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.52
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.51
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.48
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.48
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	95.48
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.42
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.39
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.39
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.35
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.29
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.26
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.2
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.19
3m70_A	286	Tellurite resistance protein TEHB homolog; structu	95.14
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	95.12
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	95.11
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.1
3tl2_A	315	Malate dehydrogenase; center for structural genomi	95.1
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.08
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.07
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.06
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	95.05
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.02
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	94.95
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	94.95
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	94.94
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	94.94
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	94.87
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	94.82
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	94.82

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=3e-40  Score=268.33  Aligned_cols=183  Identities=19%  Similarity=0.179  Sum_probs=159.2

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ++++|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++++.          +.++.+++||++++++
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~----------g~~~~~~~~Dv~~~~~   72 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK----------GYDAHGVAFDVTDELA   72 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT----------TCCEEECCCCTTCHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEeeCCCHHH
Confidence            457899999999999999999999999999999999999999999999999874          6789999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHhh----------------h-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCILS----------------N-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l~----------------~-----------------------------------  116 (222)
                      ++++++++.+.++++|+||||||+....                |                                   
T Consensus        73 v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~  152 (255)
T 4g81_D           73 IEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA  152 (255)
T ss_dssp             HHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB
T ss_pred             HHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC
Confidence            9999999999999999999999987600                0                                   


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                   +..|+++||.|++++|||||+|+||+++|+|....... ..........|++|  +.+|+|+|..++
T Consensus       153 ~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R--~g~pediA~~v~  230 (255)
T 4g81_D          153 RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR--WGRPEELIGTAI  230 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCS--CBCGGGGHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCC--CcCHHHHHHHHH
Confidence                         89999999999999999999999999999998765433 22223334567777  899999999999


Q ss_pred             HHhcCCCcccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ||+ ++.+.|+||+.|..+|.
T Consensus       231 fL~-S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          231 FLS-SKASDYINGQIIYVDGG  250 (255)
T ss_dssp             HHH-SGGGTTCCSCEEEESTT
T ss_pred             HHh-CchhCCCcCCEEEECCC
Confidence            996 55789999999954443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=2.8e-39  Score=262.44  Aligned_cols=181  Identities=24%  Similarity=0.230  Sum_probs=154.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++|+||++|||||++|||+++|+.|++.|++|++++|+++.++++.++++..          +.++.++++|++++++++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~----------g~~~~~~~~Dvt~~~~v~   72 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM----------GKEVLGVKADVSKKKDVE   72 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTSHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHHH
Confidence            4689999999999999999999999999999999999999999999999774          678999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----hh-------------h------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----LS-------------N------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----l~-------------~------------------------------------  116 (222)
                      ++++++.+++++||+||||||+..    +.             |                                    
T Consensus        73 ~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~  152 (254)
T 4fn4_A           73 EFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGF  152 (254)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSS
T ss_pred             HHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCC
Confidence            999999999999999999999653    00             0                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcc--hh-hhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPG--AR-TLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                 +.+|+++||.|++++|||||+|+||+++|+|...........  .. ....|++|  +.+|||+|..++
T Consensus       153 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R--~g~pediA~~v~  230 (254)
T 4fn4_A          153 AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSR--LAEPEDIANVIV  230 (254)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCC--CBCHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCC--CcCHHHHHHHHH
Confidence                       899999999999999999999999999999987654332111  11 11223455  789999999999


Q ss_pred             HHhcCCCcccccccccc-cccc
Q psy7936         183 HCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      ||+ ++.+.|+||+.|. ++|.
T Consensus       231 fLa-Sd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          231 FLA-SDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             HHH-SGGGTTCCSCEEEESTTG
T ss_pred             HHh-CchhcCCcCCEEEeCCCc
Confidence            996 5578999999995 4443

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.9e-38  Score=258.62  Aligned_cols=183  Identities=15%  Similarity=0.109  Sum_probs=156.7

Q ss_pred             CCCCCCCEEEEecCCC--chHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           9 ASRLDGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      |++|+||++|||||++  |||+++|+.|+++|++|++++|+++.++++.+.+++.         ++.++.+++||+++.+
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~Dv~~~~   71 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL---------NQPEAHLYQIDVQSDE   71 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG---------TCSSCEEEECCTTCHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------CCCcEEEEEccCCCHH
Confidence            5789999999999875  9999999999999999999999999999988888765         3568899999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh--------------------hh------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL--------------------SN------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l--------------------~~------------------------------  116 (222)
                      +++++++++.+.++++|++|||||+...                    +|                              
T Consensus        72 ~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~  151 (256)
T 4fs3_A           72 EVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE  151 (256)
T ss_dssp             HHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc
Confidence            9999999999999999999999996430                    00                              


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                     +..|+++|+.|++++|||||+|+||+++|+|....... +.........|++|  +.+|||+|..
T Consensus       152 ~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R--~g~peevA~~  229 (256)
T 4fs3_A          152 FAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKR--NVDQVEVGKT  229 (256)
T ss_dssp             SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSS--CCCHHHHHHH
T ss_pred             cCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCC--CcCHHHHHHH
Confidence                           89999999999999999999999999999998876532 22233334567777  8999999999


Q ss_pred             HHHHhcCCCcccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ++||+ ++.+.|+||+.|..+|.
T Consensus       230 v~fL~-Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          230 AAYLL-SDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             HHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHh-CchhcCccCCEEEECcC
Confidence            99996 55788999999954443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=3.2e-38  Score=258.61  Aligned_cols=176  Identities=19%  Similarity=0.203  Sum_probs=144.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|++.|++|++++|+.+.++++.+++             +.++.+++||+++.+++++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-------------g~~~~~~~~Dv~~~~~v~~   92 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-------------GGGAVGIQADSANLAELDR   92 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------------CTTCEEEECCTTCHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------------CCCeEEEEecCCCHHHHHH
Confidence            489999999999999999999999999999999999999888877665             4467889999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh----------------h--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS----------------N--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~----------------~--------------------------------------  116 (222)
                      +++++.+.+++||+||||||+....                |                                      
T Consensus        93 ~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~  172 (273)
T 4fgs_A           93 LYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSV  172 (273)
T ss_dssp             HHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchH
Confidence            9999999999999999999986600                0                                      


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC------cchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF------PGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~------~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                             +..|+++||.|++++|||||+|+||+++|+|.........      ........|++|  +.+|||+|..++|
T Consensus       173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR--~g~peeiA~~v~F  250 (273)
T 4fgs_A          173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGR--VGRAEEVAAAALF  250 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSS--CBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                   8999999999999999999999999999999876543211      112223456777  8999999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+ ++.+.|+||+.|..+|
T Consensus       251 La-Sd~a~~iTG~~i~VDG  268 (273)
T 4fgs_A          251 LA-SDDSSFVTGAELFVDG  268 (273)
T ss_dssp             HH-SGGGTTCCSCEEEEST
T ss_pred             Hh-CchhcCccCCeEeECc
Confidence            96 5578999999995443

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=6.7e-37  Score=249.33  Aligned_cols=180  Identities=23%  Similarity=0.159  Sum_probs=145.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+..+. .+.+...          +.++.+++||+++.++++
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~-~~~~~~~----------~~~~~~~~~Dv~~~~~v~   71 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF-LDALAQR----------QPRATYLPVELQDDAQCR   71 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH-HHHHHHH----------CTTCEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH-HHHHHhc----------CCCEEEEEeecCCHHHHH
Confidence            57999999999999999999999999999999999999876543 3444443          568899999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH---------------hhh--------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI---------------LSN--------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~---------------l~~--------------------------------------  116 (222)
                      ++++++.+.++++|+||||||+..               -+|                                      
T Consensus        72 ~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~  151 (258)
T 4gkb_A           72 DAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTS  151 (258)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCH
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCch
Confidence            999999999999999999999754               000                                      


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-----CCcchhhhHHHHH-HHhcCChHHHHHHHH
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-----YFPGARTLGRVLM-WWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~p~e~a~~i~  182 (222)
                              +.+|+++||.|++++|||||+|+||+++|+|.......     ..........|++ |  +.+|||+|..++
T Consensus       152 ~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R--~g~peeiA~~v~  229 (258)
T 4gkb_A          152 GYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRR--FTTPDEIADTAV  229 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTS--CBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCC--CcCHHHHHHHHH
Confidence                    89999999999999999999999999999998765322     1111222334554 4  789999999999


Q ss_pred             HHhcCCCcccccccccc-cccc
Q psy7936         183 HCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      ||+ ++.++|+||+.|. ++|.
T Consensus       230 fLa-S~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          230 FLL-SPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             HHH-SGGGTTCCSCEEEESTTT
T ss_pred             HHh-CchhcCccCCeEEECCCc
Confidence            996 5678999999995 4443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.9e-37  Score=248.20  Aligned_cols=176  Identities=24%  Similarity=0.229  Sum_probs=144.6

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +.++|+||++|||||++|||+++|+.|++.|++|++++|+.+  ++..+.+++.          +.++.+++||++|+++
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~----------g~~~~~~~~Dv~d~~~   70 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD----------GGNASALLIDFADPLA   70 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT----------TCCEEEEECCTTSTTT
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh----------CCcEEEEEccCCCHHH
Confidence            347899999999999999999999999999999999999865  3455666553          6789999999999998


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      ++++++     ++++|+||||||+...                +|                                   
T Consensus        71 v~~~~~-----~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g  145 (247)
T 4hp8_A           71 AKDSFT-----DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG  145 (247)
T ss_dssp             TTTSST-----TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC
T ss_pred             HHHHHH-----hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC
Confidence            877543     4799999999998660                00                                   


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-CcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                   +.+|+++||.|++++|||||+|+||+++|+|......++ .........|++|  +.+|||+|..++
T Consensus       146 ~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR--~g~peeiA~~v~  223 (247)
T 4hp8_A          146 GIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGR--WGHSEDIAGAAV  223 (247)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSS--CBCTHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCC--CcCHHHHHHHHH
Confidence                         899999999999999999999999999999987654331 1222224467777  899999999999


Q ss_pred             HHhcCCCcccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ||+ ++.++|+||+.|..+|.
T Consensus       224 fLa-Sd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          224 FLS-SAAADYVHGAILNVDGG  243 (247)
T ss_dssp             HHT-SGGGTTCCSCEEEESTT
T ss_pred             HHh-CchhcCCcCCeEEECcc
Confidence            996 56789999999954443

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.9e-36  Score=243.67  Aligned_cols=169  Identities=20%  Similarity=0.230  Sum_probs=136.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.+.+++       .         ...++..++||+++.++++++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~---------~~~~~~~~~~Dv~~~~~v~~~   72 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------P---------RHPRIRREELDITDSQRLQRL   72 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------C---------CCTTEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------h---------hcCCeEEEEecCCCHHHHHHH
Confidence            589999999999999999999999999999999999875432       1         245789999999999999887


Q ss_pred             HHHHHhhccceeEEEechhhHHhh--------------h-----------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCILS--------------N-----------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~--------------~-----------------------------------------  116 (222)
                      ++    .++++|+||||||+..-.              |                                         
T Consensus        73 ~~----~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~  148 (242)
T 4b79_A           73 FE----ALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYS  148 (242)
T ss_dssp             HH----HCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHH
T ss_pred             HH----hcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHH
Confidence            65    469999999999976500              0                                         


Q ss_pred             -----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         117 -----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       117 -----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                           +..|+++||.|++++|||||+|+||+++|+|....... +.........|++|  +.+|+|+|..++||+ ++++
T Consensus       149 asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR--~g~peeiA~~v~fLa-Sd~a  225 (242)
T 4b79_A          149 ASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR--WGEAPEVASAAAFLC-GPGA  225 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS--CBCHHHHHHHHHHHT-SGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHHh-Cchh
Confidence                 89999999999999999999999999999998876543 22223334567777  899999999999996 6678


Q ss_pred             ccccccccccccc
Q psy7936         191 AKETGLYYSDYKV  203 (222)
Q Consensus       191 ~~~~G~~i~~~~~  203 (222)
                      .|+||+.|..++.
T Consensus       226 ~~iTG~~l~VDGG  238 (242)
T 4b79_A          226 SFVTGAVLAVDGG  238 (242)
T ss_dssp             TTCCSCEEEESTT
T ss_pred             cCccCceEEECcc
Confidence            9999999954443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=4.9e-35  Score=236.63  Aligned_cols=168  Identities=19%  Similarity=0.183  Sum_probs=140.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|++|||||++|||+++|+.|++.|++|++++|+++.++++.++              ..++.+++||+++.++++++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~--------------~~~~~~~~~Dv~~~~~v~~~v~   67 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE--------------RPNLFYFHGDVADPLTLKKFVE   67 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT--------------CTTEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------------cCCEEEEEecCCCHHHHHHHHH
Confidence            38999999999999999999999999999999998877654422              4578899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHhh----------------h-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCILS----------------N-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~----------------~-----------------------------------------  116 (222)
                      .+.++++++|+||||||+....                |                                         
T Consensus        68 ~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~  147 (247)
T 3ged_A           68 YAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYA  147 (247)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHH
Confidence            9999999999999999876600                0                                         


Q ss_pred             -----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcc
Q psy7936         117 -----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAA  191 (222)
Q Consensus       117 -----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~  191 (222)
                           +..|+++||.|+++ |||||+|+||+++|+|.....     .......|++|  +.+|+|+|..++||+++   +
T Consensus       148 asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~-----~~~~~~~Pl~R--~g~pediA~~v~fL~s~---~  216 (247)
T 3ged_A          148 SAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFT-----QEDCAAIPAGK--VGTPKDISNMVLFLCQQ---D  216 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CC-----HHHHHTSTTSS--CBCHHHHHHHHHHHHHC---S
T ss_pred             HHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHH-----HHHHhcCCCCC--CcCHHHHHHHHHHHHhC---C
Confidence                 89999999999997 999999999999999876543     22224457777  89999999999999853   5


Q ss_pred             ccccccc-cccccccc
Q psy7936         192 KETGLYY-SDYKVAKS  206 (222)
Q Consensus       192 ~~~G~~i-~~~~~~~~  206 (222)
                      |+||+.| .++|....
T Consensus       217 ~iTG~~i~VDGG~s~r  232 (247)
T 3ged_A          217 FITGETIIVDGGMSKR  232 (247)
T ss_dssp             SCCSCEEEESTTGGGC
T ss_pred             CCCCCeEEECcCHHHh
Confidence            9999999 55555443

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=7.4e-36  Score=243.74  Aligned_cols=175  Identities=22%  Similarity=0.195  Sum_probs=141.5

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      +++++|+||++|||||++|||+++|+.|+++|++|++++|+.+.                    ...+..++++|+++.+
T Consensus         4 ~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--------------------~~~~~~~~~~Dv~~~~   63 (261)
T 4h15_A            4 IEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE--------------------GLPEELFVEADLTTKE   63 (261)
T ss_dssp             CCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT--------------------TSCTTTEEECCTTSHH
T ss_pred             hhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh--------------------CCCcEEEEEcCCCCHH
Confidence            45678999999999999999999999999999999999997642                    0123347899999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH-----h-------------hh--------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI-----L-------------SN--------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~-----l-------------~~--------------------------------  116 (222)
                      +++++++.+.+.++++|+||||||+..     +             +|                                
T Consensus        64 ~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~  143 (261)
T 4h15_A           64 GCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRV  143 (261)
T ss_dssp             HHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhc
Confidence            999999999999999999999998643     0             00                                


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC------CC-------cchhhhHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT------YF-------PGARTLGRVLM  167 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~------~~-------~~~~~~~~~~~  167 (222)
                                      +..|+++|+.|++++|||||+|+||+++|+|.......      ..       ........|++
T Consensus       144 ~~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg  223 (261)
T 4h15_A          144 LPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLG  223 (261)
T ss_dssp             SCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTS
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCC
Confidence                            89999999999999999999999999999987543211      00       00111234666


Q ss_pred             HHhcCChHHHHHHHHHHhcCCCccccccccccccccc
Q psy7936         168 WWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       168 ~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~  204 (222)
                      |  +.+|||+|..++||+ ++.+.|+||+.|..+|..
T Consensus       224 R--~g~peevA~~v~fLa-S~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          224 R--PAKPEEVANLIAFLA-SDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             S--CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTC
T ss_pred             C--CcCHHHHHHHHHHHh-CchhcCccCcEEEECCcC
Confidence            6  889999999999996 567899999999544443

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.6e-33  Score=230.11  Aligned_cols=191  Identities=14%  Similarity=0.098  Sum_probs=148.6

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC---hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCC
Q psy7936           6 AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD---VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDL   82 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~   82 (222)
                      ...++++++|++|||||++|||+++|+.|+++|++|++++|+   .+.++++.++++..          +.++.++++|+
T Consensus         3 ~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv   72 (262)
T 3ksu_A            3 LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ----------GAKVALYQSDL   72 (262)
T ss_dssp             -CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT----------TCEEEEEECCC
T ss_pred             CccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc----------CCcEEEEECCC
Confidence            345577899999999999999999999999999999998765   45666777666552          66899999999


Q ss_pred             CChhhHHHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------
Q psy7936          83 ASFKSIRDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------  116 (222)
Q Consensus        83 ~~~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------  116 (222)
                      ++.++++++++++.+.++++|+||||||+..                -+|                              
T Consensus        73 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~  152 (262)
T 3ksu_A           73 SNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLA  152 (262)
T ss_dssp             CSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhc
Confidence            9999999999999999999999999999654                001                              


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                     +..|+++++.+++++||+||+|+||+++|+|.................+.++  ..+|+|+|+.+
T Consensus       153 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r--~~~pedvA~~v  230 (262)
T 3ksu_A          153 AYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQ--LTKIEDIAPII  230 (262)
T ss_dssp             HHHCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCC--SCCGGGTHHHH
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccC--CCCHHHHHHHH
Confidence                           8999999999999999999999999999999765433222222212334444  78999999999


Q ss_pred             HHHhcCCCccccccccc-ccccccccCCCc
Q psy7936         182 LHCALDEGAAKETGLYY-SDYKVAKSRNFP  210 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i-~~~~~~~~~~~~  210 (222)
                      +||+++  ..++||+.| .+++...+...+
T Consensus       231 ~~L~s~--~~~itG~~i~vdGg~~~~~~~~  258 (262)
T 3ksu_A          231 KFLTTD--GWWINGQTIFANGGYTTREGHH  258 (262)
T ss_dssp             HHHHTT--TTTCCSCEEEESTTCCCC----
T ss_pred             HHHcCC--CCCccCCEEEECCCccCCCccc
Confidence            999754  689999999 566665555444

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=2.6e-33  Score=230.56  Aligned_cols=184  Identities=24%  Similarity=0.288  Sum_probs=154.7

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           5 KAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         5 ~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      +.++++++++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+++...          +.++.++++|+++
T Consensus        23 ~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~d   92 (276)
T 3r1i_A           23 SVLDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV----------GGKALPIRCDVTQ   92 (276)
T ss_dssp             CGGGGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT----------TCCCEEEECCTTC
T ss_pred             ccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEEcCCCC
Confidence            344567899999999999999999999999999999999999999999998888763          5688999999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------  116 (222)
                      .++++++++++.+.++++|+||||||+...                +|                                
T Consensus        93 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~  172 (276)
T 3r1i_A           93 PDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSG  172 (276)
T ss_dssp             HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHh
Confidence            999999999999999999999999997540                00                                


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                                        +..++++++.|++++||+||+|+||+++|+|......  .........|+++  +.+|+|+|
T Consensus       173 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~--~~~~~~~~~p~~r--~~~pedvA  248 (276)
T 3r1i_A          173 HIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD--YHALWEPKIPLGR--MGRPEELT  248 (276)
T ss_dssp             TSCCCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG--GHHHHGGGSTTSS--CBCGGGSH
T ss_pred             cccCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH--HHHHHHhcCCCCC--CcCHHHHH
Confidence                              7899999999999999999999999999999875432  1112223345555  78999999


Q ss_pred             HHHHHHhcCCCcccccccccc-cccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      +.++||+ ++...++||+.|. ++|.
T Consensus       249 ~~v~fL~-s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          249 GLYLYLA-SAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             HHHHHHH-SGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHc-CccccCccCcEEEECcCc
Confidence            9999997 4567899999995 4443

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.1e-33  Score=229.92  Aligned_cols=198  Identities=23%  Similarity=0.159  Sum_probs=153.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .|.++++|++|||||++|||+++|+.|++.|++|++++|+.+.++++.+.+..          .+.++.++++|+++.++
T Consensus         2 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~   71 (280)
T 3tox_A            2 VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG----------GGGEAAALAGDVGDEAL   71 (280)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT----------TTCCEEECCCCTTCHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh----------cCCcEEEEECCCCCHHH
Confidence            35678999999999999999999999999999999999999999988888754          36689999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH-----------------hhh----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI-----------------LSN----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~----------------------------------  116 (222)
                      ++++++.+.+.++++|+||||||+..                 -+|                                  
T Consensus        72 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  151 (280)
T 3tox_A           72 HEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA  151 (280)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC
Confidence            99999999999999999999999652                 000                                  


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---CCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---YFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                    +..++++++.|++++||+||+|+||+++|+|.......   ..........|+++  ..+|+|+|+
T Consensus       152 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedvA~  229 (280)
T 3tox_A          152 GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKR--IARPEEIAE  229 (280)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSS--CBCHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCC--CcCHHHHHH
Confidence                          78999999999999999999999999999997652211   11111112234444  789999999


Q ss_pred             HHHHHhcCCCcccccccccccccccccCCCcccccCCCC
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYKVAKSRNFPFELKGKGK  218 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~  218 (222)
                      .++||+ ++...++||+.|..++....+.-+.+.+.+.+
T Consensus       230 ~v~~L~-s~~a~~itG~~i~vdGG~~~~~~a~~~~~~~~  267 (280)
T 3tox_A          230 AALYLA-SDGASFVTGAALLADGGASVTKAAENLYFQSH  267 (280)
T ss_dssp             HHHHHH-SGGGTTCCSCEEEESTTGGGCC----------
T ss_pred             HHHHHh-CccccCCcCcEEEECCCccccccccchHHHhh
Confidence            999997 44578999999966555555555555544433

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=2.4e-33  Score=228.28  Aligned_cols=186  Identities=20%  Similarity=0.168  Sum_probs=153.2

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           5 KAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         5 ~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      +....+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.++..          +.++.++++|++|
T Consensus         3 ~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~d   72 (256)
T 3gaf_A            3 SYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA----------GGKAIGLECNVTD   72 (256)
T ss_dssp             ---CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT----------TCCEEEEECCTTC
T ss_pred             CCcCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEECCCCC
Confidence            344557789999999999999999999999999999999999999999998888763          6689999999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHHh---------------hh---------------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCIL---------------SN---------------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~l---------------~~---------------------------------  116 (222)
                      .++++++++++.+.++++|++|||||+...               +|                                 
T Consensus        73 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  152 (256)
T 3gaf_A           73 EQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN  152 (256)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC
Confidence            999999999999999999999999997430               00                                 


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                    +..++++++.|++++||+||+|+||+++|+|.................|+++  ..+|+|+|+.++
T Consensus       153 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r--~~~~~dva~~~~  230 (256)
T 3gaf_A          153 TNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGR--LGEAQDIANAAL  230 (256)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSS--CBCHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCC--CCCHHHHHHHHH
Confidence                          7999999999999999999999999999998765432211112212334555  789999999999


Q ss_pred             HHhcCCCcccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ||+ ++...++||+.|..++.
T Consensus       231 ~L~-s~~~~~itG~~i~vdgG  250 (256)
T 3gaf_A          231 FLC-SPAAAWISGQVLTVSGG  250 (256)
T ss_dssp             HHH-SGGGTTCCSCEEEESTT
T ss_pred             HHc-CCcccCccCCEEEECCC
Confidence            996 55678999999954443

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=4e-33  Score=227.76  Aligned_cols=186  Identities=20%  Similarity=0.199  Sum_probs=154.4

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +|+++++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.++++..         +..++.++++|+++.++
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~Dv~~~~~   74 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL---------GSGKVIGVQTDVSDRAQ   74 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------SSSCEEEEECCTTSHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---------CCCcEEEEEcCCCCHHH
Confidence            467789999999999999999999999999999999999999999998888764         24689999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH----------------hhh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI----------------LSN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------  116 (222)
                      ++++++.+.+.++++|+||||||+..                -+|                                   
T Consensus        75 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~  154 (262)
T 3pk0_A           75 CDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG  154 (262)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC
Confidence            99999999999999999999999754                000                                   


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..++++++.|++++||+||+|+||+++|++.....+. .........|+++  +.+|+|+|+.+.|
T Consensus       155 ~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~p~~r--~~~p~dva~~v~~  231 (262)
T 3pk0_A          155 YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEE-YIASMARSIPAGA--LGTPEDIGHLAAF  231 (262)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHH-HHHHHHTTSTTSS--CBCHHHHHHHHHH
T ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHH-HHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                         88999999999999999999999999999987654321 1111112234445  7899999999999


Q ss_pred             HhcCCCcccccccccc-ccccccc
Q psy7936         184 CALDEGAAKETGLYYS-DYKVAKS  206 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~-~~~~~~~  206 (222)
                      |+ ++...++||+.|. ++|...+
T Consensus       232 L~-s~~~~~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          232 LA-TKEAGYITGQAIAVDGGQVLP  254 (262)
T ss_dssp             HH-SGGGTTCCSCEEEESTTTTCC
T ss_pred             Hh-CccccCCcCCEEEECCCeecC
Confidence            97 4567899999994 5554443

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=3.7e-33  Score=228.23  Aligned_cols=185  Identities=22%  Similarity=0.198  Sum_probs=151.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ..+++++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.+....        ++.++.++++|+++.++
T Consensus         2 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~Dv~~~~~   73 (265)
T 3lf2_A            2 KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF--------PGARLFASVCDVLDALQ   73 (265)
T ss_dssp             -CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS--------TTCCEEEEECCTTCHHH
T ss_pred             CccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--------CCceEEEEeCCCCCHHH
Confidence            3457899999999999999999999999999999999999999999998887742        34469999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      ++++++.+.+.++++|+||||||+...                +|                                   
T Consensus        74 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  153 (265)
T 3lf2_A           74 VRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE  153 (265)
T ss_dssp             HHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC
Confidence            999999999999999999999997540                00                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-----Ccchh---hhH---HHHHHHhcCC
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-----FPGAR---TLG---RVLMWWWMKT  173 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-----~~~~~---~~~---~~~~~~~~~~  173 (222)
                                  +..++++++.|++++||+||+|+||+++|+|........     .....   ...   .|+++  +.+
T Consensus       154 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~  231 (265)
T 3lf2_A          154 PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGR--LGK  231 (265)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCS--CBC
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCC--CcC
Confidence                        799999999999999999999999999999876432210     00000   011   34444  779


Q ss_pred             hHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         174 PEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       174 p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+|+|+.++||+ ++...++||+.|..++.
T Consensus       232 pedvA~~v~fL~-s~~~~~itG~~i~vdGG  260 (265)
T 3lf2_A          232 PIEAARAILFLA-SPLSAYTTGSHIDVSGG  260 (265)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSEEEEESSS
T ss_pred             HHHHHHHHHHHh-CchhcCcCCCEEEECCC
Confidence            999999999997 55678999999955443

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=5e-33  Score=227.65  Aligned_cols=185  Identities=22%  Similarity=0.287  Sum_probs=153.4

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           6 AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      ...++++++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++....         +.++.++++|+++.
T Consensus        12 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------~~~~~~~~~Dv~~~   82 (266)
T 4egf_A           12 YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF---------GTDVHTVAIDLAEP   82 (266)
T ss_dssp             BCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---------CCCEEEEECCTTST
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc---------CCcEEEEEecCCCH
Confidence            345678899999999999999999999999999999999999999999888887642         56899999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH----------------hhh---------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI----------------LSN---------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------  116 (222)
                      ++++++++++.+.++++|+||||||+..                -+|                                 
T Consensus        83 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (266)
T 4egf_A           83 DAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL  162 (266)
T ss_dssp             THHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc
Confidence            9999999999999999999999999754                000                                 


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                     +..|++.++.|++++||+||+|+||+++|+|....... ..........|+++  ..+|+|+|+.
T Consensus       163 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dva~~  240 (266)
T 4egf_A          163 APLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGR--FAVPHEVSDA  240 (266)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSS--CBCHHHHHHH
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCC--CcCHHHHHHH
Confidence                           78999999999999999999999999999997654321 11111112234445  7899999999


Q ss_pred             HHHHhcCCCccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ++||+ ++...++||+.|..++
T Consensus       241 v~~L~-s~~~~~itG~~i~vdG  261 (266)
T 4egf_A          241 VVWLA-SDAASMINGVDIPVDG  261 (266)
T ss_dssp             HHHHH-SGGGTTCCSCEEEEST
T ss_pred             HHHHh-CchhcCccCcEEEECC
Confidence            99996 4567899999995443

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-32  Score=224.91  Aligned_cols=183  Identities=23%  Similarity=0.225  Sum_probs=140.0

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      +..+.+++|++|||||++|||+++|++|++.|++|+++ .|+.+..+++.+.++..          +.++.++++|+++.
T Consensus        20 ~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~   89 (267)
T 3u5t_A           20 FQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA----------GGKALTAQADVSDP   89 (267)
T ss_dssp             -------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT----------TCCEEEEECCTTCH
T ss_pred             ccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----------CCeEEEEEcCCCCH
Confidence            33345689999999999999999999999999999987 55677788888777663          56899999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHHh----------------hh---------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCIL----------------SN---------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------  116 (222)
                      ++++++++++.+.++++|+||||||+...                +|                                 
T Consensus        90 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  169 (267)
T 3u5t_A           90 AAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH  169 (267)
T ss_dssp             HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC
Confidence            99999999999999999999999997540                01                                 


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..|+++++.|++++||+||+|+||+++|+|.................|+++  ..+|+|+|+.++||
T Consensus       170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r--~~~pedvA~~v~~L  247 (267)
T 3u5t_A          170 PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLER--LGTPQDIAGAVAFL  247 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCS--CBCHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                        8999999999999999999999999999999865433322222223345555  78999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      + ++...++||+.|..++
T Consensus       248 ~-s~~~~~itG~~i~vdG  264 (267)
T 3u5t_A          248 A-GPDGAWVNGQVLRANG  264 (267)
T ss_dssp             H-STTTTTCCSEEEEESS
T ss_pred             h-CccccCccCCEEEeCC
Confidence            7 4567899999995443

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=3.8e-32  Score=221.56  Aligned_cols=185  Identities=23%  Similarity=0.227  Sum_probs=139.4

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      |+++++++|++|||||++|||+++|+.|+++|++|+++ +|+.+..++..+.++..          +.++.++++|+++.
T Consensus         1 M~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~   70 (259)
T 3edm_A            1 MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL----------GRSALAIKADLTNA   70 (259)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT----------TSCCEEEECCTTCH
T ss_pred             CCccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----------CCceEEEEcCCCCH
Confidence            34567899999999999999999999999999999998 66777777777777653          56789999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH-----------------hhh--------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI-----------------LSN--------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~--------------------------------  116 (222)
                      ++++++++++.+.++++|++|||||...                 -+|                                
T Consensus        71 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~  150 (259)
T 3edm_A           71 AEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG  150 (259)
T ss_dssp             HHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC
Confidence            9999999999999999999999998662                 000                                


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                    +..++++++.|+++. |+||+|+||+++|+|.......+.........|+++  ..+|+|+|+.++
T Consensus       151 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r--~~~pedva~~v~  227 (259)
T 3edm_A          151 GGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKR--EGSSEDVAGLVA  227 (259)
T ss_dssp             CSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC----------------------C--CBCHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHHHHHHHhcCCCCC--CcCHHHHHHHHH
Confidence                          889999999999887 999999999999999876643333333224456666  789999999999


Q ss_pred             HHhcCCCcccccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      ||+ ++...++||++|..+|...
T Consensus       228 ~L~-s~~~~~itG~~i~vdGg~~  249 (259)
T 3edm_A          228 FLA-SDDAAYVTGACYDINGGVL  249 (259)
T ss_dssp             HHH-SGGGTTCCSCEEEESBCSS
T ss_pred             HHc-CccccCccCCEEEECCCcC
Confidence            996 4567899999995444433

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.98  E-value=5.8e-33  Score=227.95  Aligned_cols=183  Identities=19%  Similarity=0.223  Sum_probs=152.7

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .+++|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.++++..          +.++.++++|+++.++
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dv~d~~~   89 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV----------GHDAEAVAFDVTSESE   89 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT----------TCCEEECCCCTTCHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCceEEEEcCCCCHHH
Confidence            346789999999999999999999999999999999999999999998888763          5689999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH----------------hhh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI----------------LSN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------  116 (222)
                      ++++++.+.+.++++|+||||||+..                -+|                                   
T Consensus        90 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~  169 (271)
T 4ibo_A           90 IIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR  169 (271)
T ss_dssp             HHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC
Confidence            99999999999999999999999753                000                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..+++.++.|++++||+||+|+||+++|+|....... .+........|+++  +.+|+|+|+.++|
T Consensus       170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedva~~v~~  247 (271)
T 4ibo_A          170 ATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKR--WGKPQELVGTAVF  247 (271)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCS--CBCGGGGHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                        78999999999999999999999999999997654221 11112212334555  7899999999999


Q ss_pred             HhcCCCcccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+ ++...++||+.|..++.
T Consensus       248 L~-s~~~~~itG~~i~vdGG  266 (271)
T 4ibo_A          248 LS-ASASDYVNGQIIYVDGG  266 (271)
T ss_dssp             HH-SGGGTTCCSCEEEESTT
T ss_pred             Hh-CccccCCCCcEEEECCC
Confidence            96 45678999999954443

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.98  E-value=1.7e-32  Score=222.36  Aligned_cols=177  Identities=25%  Similarity=0.265  Sum_probs=146.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ++++++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.+..             +..++++|++|.+++
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~Dv~d~~~v   70 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-------------NGKGMALNVTNPESI   70 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-------------GEEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-------------cceEEEEeCCCHHHH
Confidence            4678999999999999999999999999999999999999988887776632             457899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      +++++++.+.++++|++|||||+..                -+|                                    
T Consensus        71 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  150 (248)
T 3op4_A           71 EAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA  150 (248)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC
Confidence            9999999999999999999999753                000                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                 +..++++++.|++++||+||+|+||+++|+|....... .........|.++  +.+|+|+|+.+.||+
T Consensus       151 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~p~~r--~~~p~dva~~v~~L~  227 (248)
T 3op4_A          151 GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDE-QRTATLAQVPAGR--LGDPREIASAVAFLA  227 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHH-HHHHHHHTCTTCS--CBCHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHH-HHHHHHhcCCCCC--CcCHHHHHHHHHHHc
Confidence                       78899999999999999999999999999998765321 1111112233444  789999999999996


Q ss_pred             cCCCccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYK  202 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~  202 (222)
                       ++...++||+.|..++
T Consensus       228 -s~~~~~itG~~i~vdg  243 (248)
T 3op4_A          228 -SPEAAYITGETLHVNG  243 (248)
T ss_dssp             -SGGGTTCCSCEEEEST
T ss_pred             -CCccCCccCcEEEECC
Confidence             5567899999995443

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.98  E-value=5.5e-32  Score=223.46  Aligned_cols=183  Identities=21%  Similarity=0.158  Sum_probs=148.0

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+|+++++|++|||||++|||+++|+.|++.|++|++++|+.+.++++.+++..          .+.++.++++|++|.+
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dv~d~~   90 (283)
T 3v8b_A           21 QSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG----------AGGQAIALEADVSDEL   90 (283)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT----------TTCCEEEEECCTTCHH
T ss_pred             hhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----------cCCcEEEEEccCCCHH
Confidence            346778999999999999999999999999999999999999999988888765          3668999999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh-----------------hh---------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL-----------------SN---------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l-----------------~~---------------------------------  116 (222)
                      +++++++++.+.++++|++|||||+...                 +|                                 
T Consensus        91 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~  170 (283)
T 3v8b_A           91 QMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTR  170 (283)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhcc
Confidence            9999999999999999999999997420                 00                                 


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC------cchhhhHHHH--HHHhcC
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF------PGARTLGRVL--MWWWMK  172 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~------~~~~~~~~~~--~~~~~~  172 (222)
                                      +..++++++.|++++||+||+|+||+++|+|.........      ........|+  ++  ..
T Consensus       171 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r--~~  248 (283)
T 3v8b_A          171 TFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQ--PG  248 (283)
T ss_dssp             BCCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTC--CB
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCC--CC
Confidence                            7899999999999999999999999999999876432110      1111122344  44  78


Q ss_pred             ChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         173 TPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       173 ~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+|+|+.++||+ ++...++||+.|..++
T Consensus       249 ~pedvA~~v~fL~-s~~a~~itG~~i~vdG  277 (283)
T 3v8b_A          249 RSEDVAELIRFLV-SERARHVTGSPVWIDG  277 (283)
T ss_dssp             CHHHHHHHHHHHT-SGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHc-CccccCCcCCEEEECc
Confidence            9999999999996 5567899999995443

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.98  E-value=4.6e-32  Score=220.64  Aligned_cols=179  Identities=22%  Similarity=0.209  Sum_probs=145.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .|.+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+             +.++.++++|+++.++
T Consensus         2 ~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~   68 (255)
T 4eso_A            2 VMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-------------GPRVHALRSDIADLNE   68 (255)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------------GGGEEEEECCTTCHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------CCcceEEEccCCCHHH
Confidence            356789999999999999999999999999999999999999888777665             3378899999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      ++++++.+.+.++++|++|||||+...                +|                                   
T Consensus        69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  148 (255)
T 4eso_A           69 IAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG  148 (255)
T ss_dssp             HHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC
Confidence            999999999999999999999997640                00                                   


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc-----chhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP-----GARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                +..+++.++.|++++||+||+|+||+++|+|..........     .......|+++  ..+|+|+|+.+
T Consensus       149 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedvA~~v  226 (255)
T 4eso_A          149 MSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKR--NGTADEVARAV  226 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSS--CBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCC--CcCHHHHHHHH
Confidence                      88999999999999999999999999999987653221100     01111234444  67999999999


Q ss_pred             HHHhcCCCcccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +||+++  ..++||+.|..++.
T Consensus       227 ~~L~s~--~~~itG~~i~vdGG  246 (255)
T 4eso_A          227 LFLAFE--ATFTTGAKLAVDGG  246 (255)
T ss_dssp             HHHHHT--CTTCCSCEEEESTT
T ss_pred             HHHcCc--CcCccCCEEEECCC
Confidence            999764  68999999954433

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.98  E-value=2.2e-31  Score=219.54  Aligned_cols=182  Identities=19%  Similarity=0.189  Sum_probs=139.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      |.++.+|++|||||++|||+++|+.|+++|++|++++| +.+.++++.+++...          +.++.++++|+++.++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~d~~~   93 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL----------GARVIFLRADLADLSS   93 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT----------TCCEEEEECCTTSGGG
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc----------CCcEEEEEecCCCHHH
Confidence            34578999999999999999999999999999999995 778888888887653          5689999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH------------------hhh---------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI------------------LSN---------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~------------------l~~---------------------------------  116 (222)
                      ++++++.+.+.++++|+||||||+..                  -+|                                 
T Consensus        94 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~  173 (280)
T 4da9_A           94 HQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVS  173 (280)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchh
Confidence            99999999999999999999999831                  000                                 


Q ss_pred             -----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 -----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 -----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                       +..+++.++.+++++||+||+|+||+++|+|.................|+++  +.+|+|+|+
T Consensus       174 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r--~~~pedvA~  251 (280)
T 4da9_A          174 AVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRR--WGEPEDIGN  251 (280)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------C--CBCHHHHHH
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCC--cCCHHHHHH
Confidence                             7899999999999999999999999999999876543211111111456666  789999999


Q ss_pred             HHHHHhcCCCcccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      .++||+ ++...++||+.|..++.
T Consensus       252 ~v~~L~-s~~~~~itG~~i~vdGG  274 (280)
T 4da9_A          252 IVAGLA-GGQFGFATGSVIQADGG  274 (280)
T ss_dssp             HHHHHH-TSTTGGGTTCEEEESTT
T ss_pred             HHHHHh-CccccCCCCCEEEECCC
Confidence            999997 45678999999954443

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.98  E-value=3e-32  Score=223.41  Aligned_cols=180  Identities=22%  Similarity=0.212  Sum_probs=149.8

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      |+.+++++|++|||||++|||+++|+.|+++|++|++++| +.+.++++.+.++..          +.++.++++|++|.
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~d~   90 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA----------GGEAFAVKADVSQE   90 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCCEEEEECCTTSH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc----------CCcEEEEECCCCCH
Confidence            4446789999999999999999999999999999999998 677788888777663          56899999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH----------------hhh---------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI----------------LSN---------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------  116 (222)
                      ++++++++++.+.++++|+||||||+..                -+|                                 
T Consensus        91 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  170 (269)
T 4dmm_A           91 SEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM  170 (269)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC
Confidence            9999999999999999999999999763                000                                 


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                    +..+++.++.|++++||+||+|+||+++|+|......    .......|+++  ..+|+|+|+.++
T Consensus       171 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~~p~~r--~~~~~dvA~~v~  244 (269)
T 4dmm_A          171 GNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA----EKLLEVIPLGR--YGEAAEVAGVVR  244 (269)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH----HHHGGGCTTSS--CBCHHHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH----HHHHhcCCCCC--CCCHHHHHHHHH
Confidence                          7889999999999999999999999999999765321    11112334555  789999999999


Q ss_pred             HHhcCCCccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ||++++...++||+.|..++
T Consensus       245 ~l~s~~~~~~itG~~i~vdG  264 (269)
T 4dmm_A          245 FLAADPAAAYITGQVINIDG  264 (269)
T ss_dssp             HHHHCGGGGGCCSCEEEEST
T ss_pred             HHhCCcccCCCcCCEEEECC
Confidence            99877678899999995444

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.98  E-value=3e-32  Score=221.86  Aligned_cols=186  Identities=24%  Similarity=0.272  Sum_probs=150.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.++..          +.++.++++|+++.+++++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~   72 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF----------PGQILTVQMDVRNTDDIQK   72 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS----------TTCEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHHHH
Confidence            478999999999999999999999999999999999999999888877542          5689999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++.+.+.++++|+||||||+..                -+|                                      
T Consensus        73 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  152 (257)
T 3imf_A           73 MIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPG  152 (257)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCC
Confidence            99999999999999999999543                000                                      


Q ss_pred             ----------HHHHHHHHHhhcC-CCCeEEEEEeCCcccCCcCCCCC--CCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIP-GKNVNVYAVHPGIVKTELGRYMD--DTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ----------~~~~~~~la~~~~-~~gI~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                +..|+++++.|++ ++||+||+|+||+++|++.....  ............|+++  ..+|+|+|+.++|
T Consensus       153 ~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedvA~~v~~  230 (257)
T 3imf_A          153 VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGR--LGTPEEIAGLAYY  230 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCS--CBCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                      7899999999997 67999999999999999865422  1122222223345555  7899999999999


Q ss_pred             HhcCCCcccccccccccccccccCCC
Q psy7936         184 CALDEGAAKETGLYYSDYKVAKSRNF  209 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~~~~~~~~  209 (222)
                      |+ ++...++||+.|..++......+
T Consensus       231 L~-s~~~~~itG~~i~vdGG~~~~~~  255 (257)
T 3imf_A          231 LC-SDEAAYINGTCMTMDGGQHLHQY  255 (257)
T ss_dssp             HH-SGGGTTCCSCEEEESTTTTSCCC
T ss_pred             Hc-CchhcCccCCEEEECCCcccCCC
Confidence            97 45678999999965555444433

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.98  E-value=2.2e-32  Score=221.49  Aligned_cols=178  Identities=26%  Similarity=0.266  Sum_probs=146.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+             +.++.++++|+++.++++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~   68 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-------------GKKARAIAADISDPGSVK   68 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-------------CTTEEECCCCTTCHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------CCceEEEEcCCCCHHHHH
Confidence            4578999999999999999999999999999999999999888776655             347889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++++.+.++++|+||||||+...                +|                                     
T Consensus        69 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  148 (247)
T 3rwb_A           69 ALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP  148 (247)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT
T ss_pred             HHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC
Confidence            9999999999999999999997540                00                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                 +..|+++++.|++++||+||+|+||+++|++.................++++  ..+|+|+|+.+.||+
T Consensus       149 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r--~~~pedva~~v~~L~  226 (247)
T 3rwb_A          149 NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKG--KGQPEHIADVVSFLA  226 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCS--CBCHHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCC--CcCHHHHHHHHHHHh
Confidence                       7899999999999999999999999999998876543211111111133444  679999999999996


Q ss_pred             cCCCcccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~~  203 (222)
                       ++...++||+.|..++.
T Consensus       227 -s~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          227 -SDDARWITGQTLNVDAG  243 (247)
T ss_dssp             -SGGGTTCCSCEEEESTT
T ss_pred             -CccccCCCCCEEEECCC
Confidence             45678999999954443

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.98  E-value=3.3e-31  Score=214.86  Aligned_cols=181  Identities=25%  Similarity=0.275  Sum_probs=132.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.++++..          +.++.++++|+++.+++
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~   73 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD----------GGTAISVAVDVSDPESA   73 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCEEEEEECCTTSHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHH
Confidence            35678999999999999999999999999999999999999999998888763          66899999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhH---H----------------hhh---------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYC---I----------------LSN---------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~---~----------------l~~---------------------------------  116 (222)
                      +++++++.+.++++|++|||||+.   .                -+|                                 
T Consensus        74 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  153 (253)
T 3qiv_A           74 KAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL  153 (253)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC
Confidence            999999999999999999999972   1                000                                 


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                 +..+++.++.+++++||+||+|+||+++|++.................|+.+  ..+|+|+|+.++|++
T Consensus       154 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l~  231 (253)
T 3qiv_A          154 YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSR--MGTPDDLVGMCLFLL  231 (253)
T ss_dssp             ------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------CCHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCC--CCCHHHHHHHHHHHc
Confidence                       7889999999999999999999999999999876544333333324456666  789999999999996


Q ss_pred             cCCCccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYK  202 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~  202 (222)
                      + +...+++|+.|..++
T Consensus       232 s-~~~~~~tG~~~~vdg  247 (253)
T 3qiv_A          232 S-DEASWITGQIFNVDG  247 (253)
T ss_dssp             S-GGGTTCCSCEEEC--
T ss_pred             C-ccccCCCCCEEEECC
Confidence            4 457899999995444

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.97  E-value=1.2e-31  Score=219.11  Aligned_cols=185  Identities=19%  Similarity=0.141  Sum_probs=145.9

Q ss_pred             CCCCCCCCCCEEEEecCC-CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           6 AVSASRLDGKTVIITGCN-TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      ..++..+++|++|||||+ +|||++++++|+++|++|++++|+.+.++++.++++..         ++.++.++++|+++
T Consensus        14 ~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~Dl~~   84 (266)
T 3o38_A           14 IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL---------GLGRVEAVVCDVTS   84 (266)
T ss_dssp             CCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------CSSCEEEEECCTTC
T ss_pred             cccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc---------CCCceEEEEeCCCC
Confidence            344567899999999998 59999999999999999999999999999988888654         35689999999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------  116 (222)
                      .++++++++++.+.++++|+||||||+..                -+|                                
T Consensus        85 ~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~  164 (266)
T 3o38_A           85 TEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLG  164 (266)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHH
Confidence            99999999999999999999999999743                000                                


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                      +..+++.++.+++++||+||+|+||+++|+|.......+.........++++  ..+|+|+|+.
T Consensus       165 ~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r--~~~~~dva~~  242 (266)
T 3o38_A          165 WRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGR--AAEPWEVAAT  242 (266)
T ss_dssp             TCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSS--CCCHHHHHHH
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCC--CCCHHHHHHH
Confidence                            7899999999999999999999999999999876544333222223334445  7899999999


Q ss_pred             HHHHhcCCCccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ++||++ +...++||++|..++
T Consensus       243 i~~l~s-~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          243 IAFLAS-DYSSYMTGEVVSVSS  263 (266)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESS
T ss_pred             HHHHcC-ccccCccCCEEEEcC
Confidence            999974 457899999995443

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.97  E-value=1.8e-32  Score=227.48  Aligned_cols=186  Identities=21%  Similarity=0.217  Sum_probs=153.5

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ..|+++++|++|||||++|||+++|+.|++.|++|++++|+.+.++++.++++..         ...++.++++|+++.+
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~Dv~d~~  104 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL---------GAGNVIGVRLDVSDPG  104 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS---------SSSCEEEEECCTTCHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh---------CCCcEEEEEEeCCCHH
Confidence            3467889999999999999999999999999999999999999998888888653         2368999999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH----------------hhh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI----------------LSN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~----------------------------------  116 (222)
                      +++++++.+.+.++++|+||||||+..                -+|                                  
T Consensus       105 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~  184 (293)
T 3rih_A          105 SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT  184 (293)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC
Confidence            999999999999999999999999754                000                                  


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                    +..|+++++.|++++||+||+|+||+++|++....... .........|+++  +.+|+|+|+.++
T Consensus       185 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~p~~r--~~~p~dvA~~v~  261 (293)
T 3rih_A          185 GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEE-YISGMARSIPMGM--LGSPVDIGHLAA  261 (293)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHH-HHHHHHTTSTTSS--CBCHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHH-HHHHHHhcCCCCC--CCCHHHHHHHHH
Confidence                          78999999999999999999999999999987654321 1111112334555  789999999999


Q ss_pred             HHhcCCCcccccccccc-cccccc
Q psy7936         183 HCALDEGAAKETGLYYS-DYKVAK  205 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~-~~~~~~  205 (222)
                      ||+ ++...++||+.|. ++|...
T Consensus       262 fL~-s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          262 FLA-TDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHH-SGGGTTCCSCEEEESTTTTC
T ss_pred             HHh-CccccCCCCCEEEECCCccC
Confidence            996 4567899999995 444433

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.97  E-value=7.9e-32  Score=219.64  Aligned_cols=180  Identities=22%  Similarity=0.204  Sum_probs=149.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ++|++|||||++|||+++++.|+++|++|+++ +|+.+.++++.+.++..          +.++.++++|+++.++++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~   72 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL----------GVKVLVVKANVGQPAKIKEM   72 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT----------TCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHHHHH
Confidence            58999999999999999999999999999986 89999998888888653          56899999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH----------------hhh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI----------------LSN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------------  116 (222)
                      ++.+.+.++++|+||||||+..                -+|                                       
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  152 (258)
T 3oid_A           73 FQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYT  152 (258)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcH
Confidence            9999999999999999998643                000                                       


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                              +..|+++++.|++++||+||+|+||+++|+|....... ..........|+++  +.+|+|+|+.++||+ +
T Consensus       153 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~~~dva~~v~~L~-s  229 (258)
T 3oid_A          153 TVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGR--MVEIKDMVDTVEFLV-S  229 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSS--CBCHHHHHHHHHHHT-S
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHHh-C
Confidence                    89999999999999999999999999999998765432 11111112334445  789999999999996 4


Q ss_pred             CCcccccccccc-cccccc
Q psy7936         188 EGAAKETGLYYS-DYKVAK  205 (222)
Q Consensus       188 ~~~~~~~G~~i~-~~~~~~  205 (222)
                      +...++||+.|. ++|...
T Consensus       230 ~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          230 SKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             STTTTCCSCEEEESTTGGG
T ss_pred             cccCCccCCEEEECCCccC
Confidence            557899999994 444443

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.97  E-value=2.4e-32  Score=224.17  Aligned_cols=180  Identities=22%  Similarity=0.193  Sum_probs=150.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.++..          +.++.++.+|++|.++++
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~d~~~v~   93 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA----------GLEGRGAVLNVNDATAVD   93 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----------TCCCEEEECCTTCHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEEeCCCHHHHH
Confidence            5689999999999999999999999999999999999999999988888764          557889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++++.+.++++|+||||||+...                +|                                     
T Consensus        94 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  173 (270)
T 3ftp_A           94 ALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG  173 (270)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC
Confidence            9999999999999999999996540                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..|+++++.|++++||+||+|+||+++|+|....... .........|+++  +.+|+|+|+.++||+ 
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~p~~r--~~~pedvA~~v~~L~-  249 (270)
T 3ftp_A          174 QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQE-QQTALKTQIPLGR--LGSPEDIAHAVAFLA-  249 (270)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHH-HHHHHHTTCTTCS--CBCHHHHHHHHHHHH-
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHH-HHHHHHhcCCCCC--CCCHHHHHHHHHHHh-
Confidence                      78899999999999999999999999999997754321 1111112234444  679999999999997 


Q ss_pred             CCCcccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYKV  203 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~~  203 (222)
                      ++...++||+.|..++.
T Consensus       250 s~~~~~itG~~i~vdGG  266 (270)
T 3ftp_A          250 SPQAGYITGTTLHVNGG  266 (270)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CCCcCCccCcEEEECCC
Confidence            55678999999954443

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.97  E-value=1.2e-31  Score=222.70  Aligned_cols=185  Identities=14%  Similarity=0.085  Sum_probs=147.2

Q ss_pred             CCCCCCCCCCEEEEecCCC--chHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCC
Q psy7936           6 AVSASRLDGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLA   83 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~   83 (222)
                      +..++.|++|++|||||++  |||+++|+.|++.|++|++++|+.+..+.+.+.....           +.+.+++||++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~Dv~   90 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-----------GVKLTVPCDVS   90 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-----------TCCEEEECCTT
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-----------CCeEEEEcCCC
Confidence            4456778999999999996  9999999999999999999999987655555444432           24678999999


Q ss_pred             ChhhHHHHHHHHHhhccceeEEEechhhHHh--------------------hh---------------------------
Q psy7936          84 SFKSIRDCAQDINQTEANVHILINNAVYCIL--------------------SN---------------------------  116 (222)
Q Consensus        84 ~~~~v~~~~~~i~~~~~~id~li~~ag~~~l--------------------~~---------------------------  116 (222)
                      +.++++++++.+.+.++++|+||||||+...                    +|                           
T Consensus        91 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~  170 (296)
T 3k31_A           91 DAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY  170 (296)
T ss_dssp             CHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence            9999999999999999999999999997520                    00                           


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHH
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~  177 (222)
                                        +..|+++++.|++++||+||+|+||+++|+|....... ..........|+++  ..+|+|+
T Consensus       171 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedv  248 (296)
T 3k31_A          171 GAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRR--NTTLDDV  248 (296)
T ss_dssp             GGTSCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSS--CCCHHHH
T ss_pred             hhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCC--CCCHHHH
Confidence                              78999999999999999999999999999997755321 11111112234445  7899999


Q ss_pred             HHHHHHHhcCCCccccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~~~  204 (222)
                      |+.++||+ ++...++||+.|..++..
T Consensus       249 A~~v~fL~-s~~a~~itG~~i~vdGG~  274 (296)
T 3k31_A          249 GGAALYLL-SDLGRGTTGETVHVDCGY  274 (296)
T ss_dssp             HHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHc-CCccCCccCCEEEECCCc
Confidence            99999997 456789999999544433

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.97  E-value=5.7e-32  Score=222.58  Aligned_cols=183  Identities=19%  Similarity=0.152  Sum_probs=149.7

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ++..|++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++....         +.++.++++|+++.++
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~   91 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT---------GRRCLPLSMDVRAPPA   91 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH---------SSCEEEEECCTTCHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc---------CCcEEEEEcCCCCHHH
Confidence            4455899999999999999999999999999999999999999888888886542         6689999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH----------------hhh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI----------------LSN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------  116 (222)
                      ++++++++.+.++++|+||||||+..                -+|                                   
T Consensus        92 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  171 (277)
T 4fc7_A           92 VMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ  171 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC
Confidence            99999999999999999999999543                000                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCC-CCC-CCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYM-DDT-YFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                  +..|+++++.+++++||+||+|+||+++|++.... ... ..........|+++  +.+|+|+|+.++
T Consensus       172 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dvA~~v~  249 (277)
T 4fc7_A          172 ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQR--LGNKTEIAHSVL  249 (277)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSS--CBCHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCC--CcCHHHHHHHHH
Confidence                        78999999999999999999999999999864321 111 11111112334555  789999999999


Q ss_pred             HHhcCCCccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ||+ ++...++||+.|..++
T Consensus       250 fL~-s~~~~~itG~~i~vdG  268 (277)
T 4fc7_A          250 YLA-SPLASYVTGAVLVADG  268 (277)
T ss_dssp             HHH-SGGGTTCCSCEEEEST
T ss_pred             HHc-CCccCCcCCCEEEECC
Confidence            997 5567899999995443

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.97  E-value=2.8e-32  Score=222.92  Aligned_cols=180  Identities=21%  Similarity=0.218  Sum_probs=148.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..|++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++...          +.++.++++|+++.++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~   76 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT----------GRRALSVGTDITDDAQVA   76 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHHH
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHHH
Confidence            3478999999999999999999999999999999999999999998888763          668999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-----------------hhh------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-----------------LSN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-----------------l~~------------------------------------  116 (222)
                      ++++++.+.++++|++|||||...                 -+|                                    
T Consensus        77 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  156 (264)
T 3ucx_A           77 HLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAK  156 (264)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTT
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCc
Confidence            999999999999999999998742                 000                                    


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC----------CCcchhhhHHHHHHHhcCChHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT----------YFPGARTLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~p~e  176 (222)
                                +..++++++.|++++||+||+|+||+++|+|.......          ..........|+++  ..+|+|
T Consensus       157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~d  234 (264)
T 3ucx_A          157 YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKR--LPTEDE  234 (264)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSS--CCBHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCccc--CCCHHH
Confidence                      78999999999999999999999999999987643210          00111111223444  779999


Q ss_pred             HHHHHHHHhcCCCccccccccccccc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+.++||+ ++...++||+.|..++
T Consensus       235 vA~~v~~L~-s~~~~~itG~~i~vdG  259 (264)
T 3ucx_A          235 VASAILFMA-SDLASGITGQALDVNC  259 (264)
T ss_dssp             HHHHHHHHH-SGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHc-CccccCCCCCEEEECC
Confidence            999999997 5567899999995443

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.97  E-value=5.6e-32  Score=221.52  Aligned_cols=179  Identities=25%  Similarity=0.272  Sum_probs=147.4

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+|+++++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.+             +.++.++++|+++.+
T Consensus        20 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~   86 (266)
T 3grp_A           20 GSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-------------GKDVFVFSANLSDRK   86 (266)
T ss_dssp             -CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------------CSSEEEEECCTTSHH
T ss_pred             cchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------CCceEEEEeecCCHH
Confidence            3467889999999999999999999999999999999999998887775543             457899999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------  116 (222)
                      +++++++.+.+.++++|+||||||+...                +|                                  
T Consensus        87 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~  166 (266)
T 3grp_A           87 SIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG  166 (266)
T ss_dssp             HHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC
Confidence            9999999999999999999999997540                00                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..++++++.|++++||+||+|+||+++|+|.....+. .........|+++  ..+|+|+|+.++|
T Consensus       167 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~p~~r--~~~~edvA~~v~~  243 (266)
T 3grp_A          167 NPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEK-QKEAIMAMIPMKR--MGIGEEIAFATVY  243 (266)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHH-HHHHHHTTCTTCS--CBCHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHH-HHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                         78899999999999999999999999999998765321 1111112234555  7899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+ ++...++||+.|..++
T Consensus       244 L~-s~~~~~itG~~i~vdG  261 (266)
T 3grp_A          244 LA-SDEAAYLTGQTLHING  261 (266)
T ss_dssp             HH-SGGGTTCCSCEEEEST
T ss_pred             Hh-CccccCccCCEEEECC
Confidence            97 4567899999995443

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.97  E-value=1.3e-31  Score=220.60  Aligned_cols=183  Identities=21%  Similarity=0.216  Sum_probs=145.0

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           5 KAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         5 ~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      ..|++.++++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.+             +.++.++++|+++
T Consensus        20 ~sm~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~d   86 (277)
T 3gvc_A           20 GSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-------------GCGAAACRVDVSD   86 (277)
T ss_dssp             -------CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-------------CSSCEEEECCTTC
T ss_pred             CCCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------------CCcceEEEecCCC
Confidence            345567789999999999999999999999999999999999999888776655             3467889999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------  116 (222)
                      .++++++++.+.+.++++|+||||||+...                +|                                
T Consensus        87 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~  166 (277)
T 3gvc_A           87 EQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQ  166 (277)
T ss_dssp             HHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence            999999999999999999999999997540                00                                


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---CCcchhh---hHHHHHHHhcCChH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---YFPGART---LGRVLMWWWMKTPE  175 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~p~  175 (222)
                                     +..++++++.|++++||+||+|+||+++|+|.......   .......   ...|.++  +.+|+
T Consensus       167 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~pe  244 (277)
T 3gvc_A          167 VAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGR--MAAPE  244 (277)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSS--CBCHH
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccC--CCCHH
Confidence                           78999999999999999999999999999987542210   1111111   1455555  78999


Q ss_pred             HHHHHHHHHhcCCCcccccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+|+.++||+ ++...++||+.|..++.
T Consensus       245 dvA~~v~~L~-s~~a~~itG~~i~vdGG  271 (277)
T 3gvc_A          245 EMAGIVVFLL-SDDASMITGTTQIADGG  271 (277)
T ss_dssp             HHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHc-CCccCCccCcEEEECCc
Confidence            9999999997 44578999999954443

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.97  E-value=2.1e-31  Score=219.71  Aligned_cols=186  Identities=18%  Similarity=0.162  Sum_probs=147.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+             +.++.++++|+++.+++++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~   68 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-------------GGNAVGVVGDVRSLQDQKR   68 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-------------BTTEEEEECCTTCHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-------------CCcEEEEEcCCCCHHHHHH
Confidence            478999999999999999999999999999999999998877665432             4578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH---------------------hhh---------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI---------------------LSN---------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~---------------------l~~---------------------------------  116 (222)
                      +++++.+.++++|+||||||+..                     -+|                                 
T Consensus        69 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  148 (281)
T 3zv4_A           69 AAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP  148 (281)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS
T ss_pred             HHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC
Confidence            99999999999999999999632                     011                                 


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---------CCcchhhhHHHHHHHhcCCh
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---------YFPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~p  174 (222)
                                   +..++++++.|++++ |+||+|+||+++|+|.......         +.........|+++  ..+|
T Consensus       149 ~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p  225 (281)
T 3zv4_A          149 NGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGR--MPAL  225 (281)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSS--CCCG
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCC--CCCH
Confidence                         899999999999987 9999999999999997643211         11111112335555  7899


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccccccccCCCccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFPFE  212 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~~~~~~~~  212 (222)
                      +|+|+.++||++++...++||+.|..++......+...
T Consensus       226 edvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~~~~~~  263 (281)
T 3zv4_A          226 EEYTGAYVFFATRGDSLPATGALLNYDGGMGVRGFLTA  263 (281)
T ss_dssp             GGGSHHHHHHHSTTTSTTCSSCEEEESSSGGGCCSSSS
T ss_pred             HHHHHHHHHhhcccccccccCcEEEECCCCccccchhh
Confidence            99999999998757788999999955544444444333

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.97  E-value=9.5e-32  Score=220.41  Aligned_cols=181  Identities=22%  Similarity=0.207  Sum_probs=146.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +.+|++|++|||||++|||+++|+.|+++|++|+++++ +.+.++++.++++..          +.++.++++|+++.++
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~   82 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL----------GSDAIAIKADIRQVPE   82 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCCEEEEECCTTSHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----------CCcEEEEEcCCCCHHH
Confidence            45689999999999999999999999999999999876 566777888777663          6689999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH----------------hhh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI----------------LSN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------  116 (222)
                      ++++++++.+.++++|+||||||+..                -+|                                   
T Consensus        83 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  162 (270)
T 3is3_A           83 IVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVP  162 (270)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCT
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCC
Confidence            99999999999999999999999754                000                                   


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-----------CCcchhhhHHHHHHHhcCCh
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-----------YFPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~p  174 (222)
                                 +..++++++.|++++||+||+|+||+++|+|.......           ..........|+++  ..+|
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p  240 (270)
T 3is3_A          163 KHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHR--NGWP  240 (270)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCS--CBCH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCC--CCCH
Confidence                       88999999999999999999999999999997632110           00001111234444  6789


Q ss_pred             HHHHHHHHHHhcCCCccccccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+|+.++||+ ++...++||+.|..++
T Consensus       241 ~dvA~~v~~L~-s~~~~~itG~~i~vdG  267 (270)
T 3is3_A          241 QDVANVVGFLV-SKEGEWVNGKVLTLDG  267 (270)
T ss_dssp             HHHHHHHHHHT-SGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHc-CCccCCccCcEEEeCC
Confidence            99999999996 5567899999995444

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.97  E-value=3.3e-31  Score=217.47  Aligned_cols=181  Identities=22%  Similarity=0.209  Sum_probs=149.3

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC-hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      +...++++|++|||||++|||+++|+.|+++|++|++++++ .+.++++.++++..          +.++.++++|+++.
T Consensus        24 m~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~Dv~d~   93 (271)
T 3v2g_A           24 MTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA----------GGRAVAIRADNRDA   93 (271)
T ss_dssp             HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCCEEEEECCTTCH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc----------CCcEEEEECCCCCH
Confidence            34456899999999999999999999999999999998665 56777787777653          66899999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH----------------hhh---------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI----------------LSN---------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------  116 (222)
                      ++++++++++.+.++++|+||||||+..                -+|                                 
T Consensus        94 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~  173 (271)
T 3v2g_A           94 EAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP  173 (271)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC
Confidence            9999999999999999999999999753                000                                 


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..|+++++.|++++||+||+|+||+++|+|.....  ..........|+++  ..+|+|+|+.++|
T Consensus       174 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~r--~~~pedvA~~v~f  249 (271)
T 3v2g_A          174 WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIATGS--YGEPQDIAGLVAW  249 (271)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCTTSS--CBCHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCCCCC--CCCHHHHHHHHHH
Confidence                         889999999999999999999999999999986532  12222223334555  7899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+ ++...++||+.|..++
T Consensus       250 L~-s~~~~~itG~~i~vdG  267 (271)
T 3v2g_A          250 LA-GPQGKFVTGASLTIDG  267 (271)
T ss_dssp             HH-SGGGTTCCSCEEEEST
T ss_pred             Hh-CcccCCccCCEEEeCc
Confidence            96 5567899999995444

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.97  E-value=4.6e-31  Score=217.90  Aligned_cols=179  Identities=20%  Similarity=0.190  Sum_probs=144.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC----------------hhHHHHHHHHHHHhhhhhcccCCCCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD----------------VEKAETTASEIRKHFEVATSEDKKPG   73 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~   73 (222)
                      .++++|++|||||++|||+++|+.|++.|++|++++|+                .+.++++.+.++..          +.
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~   76 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH----------NR   76 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT----------TC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc----------CC
Confidence            46889999999999999999999999999999999987                67777777776553          56


Q ss_pred             eEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH-----------------hhh--------------------
Q psy7936          74 EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI-----------------LSN--------------------  116 (222)
Q Consensus        74 ~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~--------------------  116 (222)
                      ++.++++|+++.++++++++++.+.++++|+||||||+..                 -+|                    
T Consensus        77 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~  156 (286)
T 3uve_A           77 RIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR  156 (286)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence            8999999999999999999999999999999999999743                 000                    


Q ss_pred             ----------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC------CC---CCcch
Q psy7936         117 ----------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD------DT---YFPGA  159 (222)
Q Consensus       117 ----------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~------~~---~~~~~  159 (222)
                                                  +..|+++++.|++++||+||+|+||+++|+|.....      +.   .....
T Consensus       157 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T 3uve_A          157 GGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDD  236 (286)
T ss_dssp             CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHH
T ss_pred             CcEEEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhh
Confidence                                        789999999999999999999999999999986421      00   00000


Q ss_pred             h------hhHHHHHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         160 R------TLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       160 ~------~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .      ....| ++  +.+|+|+|+.++||+ ++...++||+.|..++
T Consensus       237 ~~~~~~~~~~~p-~r--~~~p~dvA~~v~fL~-s~~a~~itG~~i~vdG  281 (286)
T 3uve_A          237 MAPICQMFHTLP-IP--WVEPIDISNAVLFFA-SDEARYITGVTLPIDA  281 (286)
T ss_dssp             HHHHHHTTCSSS-CS--CBCHHHHHHHHHHHH-SGGGTTCCSCEEEEST
T ss_pred             HHHHHHhhhccC-CC--cCCHHHHHHHHHHHc-CccccCCcCCEEeECC
Confidence            0      00011 22  679999999999997 5567899999995443

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.97  E-value=2.1e-31  Score=219.47  Aligned_cols=185  Identities=17%  Similarity=0.181  Sum_probs=149.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..++++...       ..+.++.++++|+++.++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~~~~Dv~~~~~v~   79 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALG-------ANGGAIRYEPTDITNEDETA   79 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-------CSSCEEEEEECCTTSHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-------CCCceEEEEeCCCCCHHHHH
Confidence            56889999999999999999999999999999999999999999988887641       01238999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-----------------hhh------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-----------------LSN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-----------------l~~------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||...                 -+|                                    
T Consensus        80 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  159 (281)
T 3svt_A           80 RAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR  159 (281)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC
Confidence            999999999999999999999721                 001                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                 +..+++.++.|++++||+||+|+||+++|+|....... ..........|+++  ..+|+|+|+.++||
T Consensus       160 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r--~~~~~dva~~~~~l  237 (281)
T 3svt_A          160 WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPR--QGEVEDVANMAMFL  237 (281)
T ss_dssp             TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSS--CBCHHHHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCC--CCCHHHHHHHHHHH
Confidence                       89999999999999999999999999999998654221 11111112234444  67999999999999


Q ss_pred             hcCCCccccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~~~  204 (222)
                      ++ +...++||+.|..++..
T Consensus       238 ~s-~~~~~itG~~~~vdgG~  256 (281)
T 3svt_A          238 LS-DAASFVTGQVINVDGGQ  256 (281)
T ss_dssp             HS-GGGTTCCSCEEEESTTG
T ss_pred             hC-cccCCCCCCEEEeCCCh
Confidence            74 45789999999544433

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.97  E-value=4.9e-31  Score=217.17  Aligned_cols=183  Identities=21%  Similarity=0.199  Sum_probs=146.0

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-------------ChhHHHHHHHHHHHhhhhhcccCCCCC
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-------------DVEKAETTASEIRKHFEVATSEDKKPG   73 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-------------~~~~~~~~~~~i~~~~~~~~~~~~~~~   73 (222)
                      ..|.++++|++|||||++|||+++|+.|+++|++|++++|             +.+.++++.+.++..          +.
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~   77 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ----------GR   77 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT----------TC
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc----------CC
Confidence            3456789999999999999999999999999999999998             677888887777653          66


Q ss_pred             eEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH----------------hhh---------------------
Q psy7936          74 EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI----------------LSN---------------------  116 (222)
Q Consensus        74 ~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------  116 (222)
                      ++.++++|+++.++++++++++.+.++++|+||||||+..                -+|                     
T Consensus        78 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~  157 (280)
T 3pgx_A           78 KALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNG  157 (280)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence            8999999999999999999999999999999999999754                000                     


Q ss_pred             ---------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC-------CCCCcch--h
Q psy7936         117 ---------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD-------DTYFPGA--R  160 (222)
Q Consensus       117 ---------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~-------~~~~~~~--~  160 (222)
                                                 +..|+++++.|++++||+||+|+||+++|+|.....       .......  .
T Consensus       158 g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  237 (280)
T 3pgx_A          158 GSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP  237 (280)
T ss_dssp             EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC
T ss_pred             CEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh
Confidence                                       789999999999999999999999999999976410       0000000  0


Q ss_pred             hhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccccc-cccc
Q psy7936         161 TLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       161 ~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      ....|. +  +.+|+|+|+.++||+ ++...++||+.|. ++|.
T Consensus       238 ~~~~~~-r--~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          238 MPVQPN-G--FMTADEVADVVAWLA-GDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             BTTBCS-S--CBCHHHHHHHHHHHH-SGGGTTCSSCEEEESTTG
T ss_pred             cccCCC-C--CCCHHHHHHHHHHHh-CccccCCCCCEEEECCCc
Confidence            011112 2  679999999999997 4567899999994 4443

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.97  E-value=2.2e-31  Score=218.41  Aligned_cols=178  Identities=22%  Similarity=0.147  Sum_probs=145.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+.+             +.++.++.+|+++.++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~   73 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-------------GRGAVHHVVDLTNEVSVR   73 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-------------CTTCEEEECCTTCHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-------------CCCeEEEECCCCCHHHHH
Confidence            4688999999999999999999999999999999999998888776655             336778999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh------------------hh-----------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL------------------SN-----------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l------------------~~-----------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+...                  +|                                   
T Consensus        74 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  153 (271)
T 3tzq_B           74 ALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY  153 (271)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC
Confidence            9999999999999999999997610                  01                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..|+++++.|++++||+||+|+||+++|+|.................++++  +.+|+|+|+.++||
T Consensus       154 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r--~~~p~dvA~~v~~L  231 (271)
T 3tzq_B          154 DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGR--IGEPHEIAELVCFL  231 (271)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSS--CBCHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                        7999999999999999999999999999999873322111111112234444  77999999999999


Q ss_pred             hcCCCcccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~~  203 (222)
                      + ++...++||+.|..++.
T Consensus       232 ~-s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          232 A-SDRAAFITGQVIAADSG  249 (271)
T ss_dssp             H-SGGGTTCCSCEEEESTT
T ss_pred             h-CcccCCcCCCEEEECCC
Confidence            7 45678999999954443

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.97  E-value=4.6e-31  Score=217.06  Aligned_cols=179  Identities=21%  Similarity=0.235  Sum_probs=145.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-------------ChhHHHHHHHHHHHhhhhhcccCCCCCeEE
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-------------DVEKAETTASEIRKHFEVATSEDKKPGEVL   76 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   76 (222)
                      .++++|++|||||++|||+++|+.|+++|++|++++|             +.+.+++..+.+...          +.++.
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~   76 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA----------NRRIV   76 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT----------TCCEE
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc----------CCeEE
Confidence            4688999999999999999999999999999999998             677777777777653          66899


Q ss_pred             EEecCCCChhhHHHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------
Q psy7936          77 IKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------  116 (222)
Q Consensus        77 ~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------  116 (222)
                      ++.+|+++.++++++++++.+.++++|+||||||+...                +|                        
T Consensus        77 ~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~i  156 (277)
T 3tsc_A           77 AAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSI  156 (277)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred             EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEE
Confidence            99999999999999999999999999999999997540                00                        


Q ss_pred             ------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC----------CCCCcchhhh
Q psy7936         117 ------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD----------DTYFPGARTL  162 (222)
Q Consensus       117 ------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~----------~~~~~~~~~~  162 (222)
                                              +..|+++++.|++++||+||+|+||+++|+|.....          ..........
T Consensus       157 v~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (277)
T 3tsc_A          157 ILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTP  236 (277)
T ss_dssp             EEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCC
T ss_pred             EEEccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhh
Confidence                                    899999999999999999999999999999976410          0000000001


Q ss_pred             HHHHHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         163 GRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       163 ~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ..|. +  ..+|+|+|+.++||++ +...++||+.|..++
T Consensus       237 ~~p~-r--~~~pedvA~~v~~L~s-~~~~~itG~~i~vdG  272 (277)
T 3tsc_A          237 FLPD-W--VAEPEDIADTVCWLAS-DESRKVTAAQIPVDQ  272 (277)
T ss_dssp             SSSC-S--CBCHHHHHHHHHHHHS-GGGTTCCSCEEEEST
T ss_pred             ccCC-C--CCCHHHHHHHHHHHhC-ccccCCcCCEEeeCC
Confidence            1122 2  6899999999999974 467899999995443

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.97  E-value=3.3e-31  Score=215.86  Aligned_cols=179  Identities=25%  Similarity=0.235  Sum_probs=145.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.+             +.++.++++|+++.+++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~v   69 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-------------GPAAYAVQMDVTRQDSI   69 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------------CTTEEEEECCTTCHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------CCCceEEEeeCCCHHHH
Confidence            35688999999999999999999999999999999999999888777665             33678999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      +++++++.+.++++|+||||||+..                -+|                                    
T Consensus        70 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  149 (259)
T 4e6p_A           70 DAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE  149 (259)
T ss_dssp             HHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC
Confidence            9999999999999999999999743                000                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC----------CCCCcchhhhHHHHHHHhcCCh
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD----------DTYFPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~p  174 (222)
                                  +..+++.++.|++++||+||+|+||+++|++.....          ..+.........|+++  +.+|
T Consensus       150 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~~  227 (259)
T 4e6p_A          150 ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGR--MGTA  227 (259)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSS--CBCT
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCC--CcCH
Confidence                        789999999999999999999999999999875431          1111111112234444  7899


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +|+|+.++||+ ++...++||+.|..++.
T Consensus       228 ~dva~~v~~L~-s~~~~~itG~~i~vdgG  255 (259)
T 4e6p_A          228 EDLTGMAIFLA-SAESDYIVSQTYNVDGG  255 (259)
T ss_dssp             HHHHHHHHHTT-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHh-CCccCCCCCCEEEECcC
Confidence            99999999996 55678999999954443

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.97  E-value=4.7e-32  Score=222.99  Aligned_cols=180  Identities=23%  Similarity=0.175  Sum_probs=148.3

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      +++++||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++...          +.++.++++|+++.+++
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~~   97 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS----------GGTAQELAGDLSEAGAG   97 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT----------TCCEEEEECCTTSTTHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc----------CCeEEEEEecCCCHHHH
Confidence            35689999999999999999999999999999999999999988888888763          66899999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      +++++.+.+. +++|+||||||+..                -+|                                    
T Consensus        98 ~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~  176 (275)
T 4imr_A           98 TDLIERAEAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKS  176 (275)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC
Confidence            9999999877 99999999999643                000                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC--CCcchhhhHH-HHHHHhcCChHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT--YFPGARTLGR-VLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~p~e~a~~i~  182 (222)
                                 +..+++.++.+++++||+||+|+||+++|+|.......  +......... |+++  +.+|+|+|+.++
T Consensus       177 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedvA~~v~  254 (275)
T 4imr_A          177 VVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGR--AGRPEEMVGAAL  254 (275)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCS--CBCGGGGHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCC--CcCHHHHHHHHH
Confidence                       78999999999999999999999999999987643211  1111111122 4445  789999999999


Q ss_pred             HHhcCCCccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ||+ ++...++||+.|..++
T Consensus       255 fL~-s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          255 FLA-SEACSFMTGETIFLTG  273 (275)
T ss_dssp             HHH-SGGGTTCCSCEEEESS
T ss_pred             HHc-CcccCCCCCCEEEeCC
Confidence            997 4567899999995443

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.97  E-value=1.3e-30  Score=216.82  Aligned_cols=183  Identities=19%  Similarity=0.179  Sum_probs=145.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC------------hhHHHHHHHHHHHhhhhhcccCCCCCeEE
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD------------VEKAETTASEIRKHFEVATSEDKKPGEVL   76 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   76 (222)
                      +.++++|++|||||++|||+++|+.|++.|++|++++|+            .+.+++..+.++..          +.++.
T Consensus        23 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~   92 (299)
T 3t7c_A           23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL----------GRRII   92 (299)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT----------TCCEE
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc----------CCceE
Confidence            356899999999999999999999999999999999987            67777777777653          66899


Q ss_pred             EEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH-----------------hhh-----------------------
Q psy7936          77 IKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI-----------------LSN-----------------------  116 (222)
Q Consensus        77 ~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~-----------------------  116 (222)
                      ++++|+++.++++++++++.+.++++|+||||||+..                 -+|                       
T Consensus        93 ~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~  172 (299)
T 3t7c_A           93 ASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGS  172 (299)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEE
T ss_pred             EEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence            9999999999999999999999999999999999643                 000                       


Q ss_pred             -------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC------CC---CCcchhhh
Q psy7936         117 -------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD------DT---YFPGARTL  162 (222)
Q Consensus       117 -------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~------~~---~~~~~~~~  162 (222)
                                               +..|+++++.|++++||+||+|+||+++|+|.....      +.   ........
T Consensus       173 Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (299)
T 3t7c_A          173 IVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQV  252 (299)
T ss_dssp             EEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHH
T ss_pred             EEEECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHH
Confidence                                     789999999999999999999999999999986421      00   00000000


Q ss_pred             HHHHHH---HhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         163 GRVLMW---WWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       163 ~~~~~~---~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ......   .+..+|+|+|+.++||+ ++...++||+.|..++
T Consensus       253 ~~~~~~~~p~r~~~pedvA~~v~fL~-s~~a~~itG~~i~vdG  294 (299)
T 3t7c_A          253 ASRQMHVLPIPYVEPADISNAILFLV-SDDARYITGVSLPVDG  294 (299)
T ss_dssp             HHHHHSSSSCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEEST
T ss_pred             HhhhhcccCcCCCCHHHHHHHHHHHh-CcccccCcCCEEeeCC
Confidence            000000   12579999999999997 4567899999995444

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.97  E-value=5.2e-31  Score=218.67  Aligned_cols=184  Identities=18%  Similarity=0.120  Sum_probs=147.7

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh--hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV--EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      +.+.+|++|++|||||++|||+++|+.|+++|++|++++|+.  +..+++.+.++.          .+.++.++++|+++
T Consensus        42 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~d  111 (294)
T 3r3s_A           42 VGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE----------CGRKAVLLPGDLSD  111 (294)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH----------TTCCEEECCCCTTS
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH----------cCCcEEEEEecCCC
Confidence            344678999999999999999999999999999999999873  456666666654          26689999999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHH-----------------hhh-------------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCI-----------------LSN-------------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~-------------------------------  116 (222)
                      .++++++++.+.+.++++|++|||||...                 -+|                               
T Consensus       112 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~  191 (294)
T 3r3s_A          112 ESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ  191 (294)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc
Confidence            99999999999999999999999999743                 000                               


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC-CCCCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD-DTYFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                    +..|++.++.|++++||+||+|+||+++|+|..... ............|+++  ..+|+|+|+.+
T Consensus       192 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dvA~~v  269 (294)
T 3r3s_A          192 PSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKR--AGQPAELAPVY  269 (294)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSS--CBCGGGGHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCC--CcCHHHHHHHH
Confidence                          899999999999999999999999999999843221 1112222223345555  78999999999


Q ss_pred             HHHhcCCCcccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +||+ ++...++||+.|..++.
T Consensus       270 ~~L~-s~~~~~itG~~i~vdGG  290 (294)
T 3r3s_A          270 VYLA-SQESSYVTAEVHGVCGG  290 (294)
T ss_dssp             HHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHh-CccccCCCCCEEEECCC
Confidence            9996 55678999999954443

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.97  E-value=1.4e-31  Score=220.52  Aligned_cols=178  Identities=21%  Similarity=0.188  Sum_probs=145.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.++..          +.++.++++|+++.++++++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dv~d~~~v~~~   91 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA----------GHDVDGSSCDVTSTDEVHAA   91 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------TCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEECCCCCHHHHHHH
Confidence            47899999999999999999999999999999999999999988888653          56899999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH----------------hhh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI----------------LSN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------------  116 (222)
                      ++.+.+.++++|+||||||+..                -+|                                       
T Consensus        92 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~  171 (279)
T 3sju_A           92 VAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY  171 (279)
T ss_dssp             HHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCC
Confidence            9999999999999999999754                000                                       


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC----------CCcchhhhHHHHHHHhcCChHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT----------YFPGARTLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~p~e  176 (222)
                                +..++++++.|++++||+||+|+||+++|+|.......          ..........|+++  ..+|+|
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~ped  249 (279)
T 3sju_A          172 AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGR--YSTPEE  249 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSS--CBCHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCC--CCCHHH
Confidence                      78899999999999999999999999999987542110          00011111233444  689999


Q ss_pred             HHHHHHHHhcCCCccccccccccccc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+.++||+ ++...++||+.|..++
T Consensus       250 vA~~v~~L~-s~~a~~itG~~i~vdG  274 (279)
T 3sju_A          250 VAGLVGYLV-TDAAASITAQALNVCG  274 (279)
T ss_dssp             HHHHHHHHT-SSGGGGCCSCEEEEST
T ss_pred             HHHHHHHHh-CccccCcCCcEEEECC
Confidence            999999996 5567899999995444

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.97  E-value=6.4e-31  Score=216.83  Aligned_cols=183  Identities=25%  Similarity=0.214  Sum_probs=142.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +.+|.+|++|||||++|||+++|+.|+++|++|++++| +.+.++++.+.+...         .+.++.++++|+++.++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~~Dv~d~~~   90 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL---------SSGTVLHHPADMTKPSE   90 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT---------CSSCEEEECCCTTCHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc---------cCCcEEEEeCCCCCHHH
Confidence            56788999999999999999999999999999999999 667788887777654         35689999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH----------------hhh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI----------------LSN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------  116 (222)
                      ++++++++.+.++++|+||||||+..                -+|                                   
T Consensus        91 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  170 (281)
T 3v2h_A           91 IADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS  170 (281)
T ss_dssp             HHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC
Confidence            99999999999999999999999753                000                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc-----------chhhhHHHHHHHhcCC
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP-----------GARTLGRVLMWWWMKT  173 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~  173 (222)
                                  +..+++.++.+++++||+||+|+||+++|+|..........           .......|.++  ..+
T Consensus       171 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~  248 (281)
T 3v2h_A          171 PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKK--FIT  248 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCS--CBC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCC--ccC
Confidence                        78999999999999999999999999999997654321100           00112234444  789


Q ss_pred             hHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         174 PEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       174 p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+|+|+.++||+ ++...++||+.|..++.
T Consensus       249 ~edvA~~v~~L~-s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          249 VEQVASLALYLA-GDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             HHHHHHHHHHHH-SSGGGGCCSCEEEESTT
T ss_pred             HHHHHHHHHHHc-CCCcCCCCCcEEEECCC
Confidence            999999999997 45678999999954443

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.97  E-value=3.1e-31  Score=219.70  Aligned_cols=182  Identities=23%  Similarity=0.214  Sum_probs=145.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ..+|+||++|||||++|||+++|+.|+++|++|++++|+.+. .+++.+.++.          .+.++.++++|+++.++
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~d~~~  111 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK----------EGVKCVLLPGDLSDEQH  111 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT----------TTCCEEEEESCTTSHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh----------cCCcEEEEECCCCCHHH
Confidence            356789999999999999999999999999999999998764 4444444443          36689999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH-----------------hhh----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI-----------------LSN----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~----------------------------------  116 (222)
                      ++++++++.+.++++|+||||||...                 -+|                                  
T Consensus       112 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~  191 (291)
T 3ijr_A          112 CKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE  191 (291)
T ss_dssp             HHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC
Confidence            99999999999999999999998642                 000                                  


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                 +..|++.++.|++++||+||+|+||+++|+|.................|+++  ..+|+|+|+.++||+
T Consensus       192 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dvA~~v~~L~  269 (291)
T 3ijr_A          192 TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQR--PGQPYELAPAYVYLA  269 (291)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSS--CBCGGGTHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCC--CcCHHHHHHHHHHHh
Confidence                       7899999999999999999999999999998654322111111112234444  789999999999997


Q ss_pred             cCCCcccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~~  203 (222)
                       ++...++||+.|..++.
T Consensus       270 -s~~~~~itG~~i~vdGG  286 (291)
T 3ijr_A          270 -SSDSSYVTGQMIHVNGG  286 (291)
T ss_dssp             -SGGGTTCCSCEEEESSS
T ss_pred             -CCccCCCcCCEEEECCC
Confidence             44678999999954443

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.97  E-value=5.5e-31  Score=212.79  Aligned_cols=178  Identities=24%  Similarity=0.268  Sum_probs=148.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.++..          +.++.++++|+++.+++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~   71 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK----------GFKARGLVLNISDIESIQN   71 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCceEEEEecCCCHHHHHH
Confidence            468999999999999999999999999999999999999999988888763          5689999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++++.+.++++|++|||||+..                -+|                                      
T Consensus        72 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  151 (247)
T 3lyl_A           72 FFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQ  151 (247)
T ss_dssp             HHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc
Confidence            99999999999999999999753                000                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..++++++.+++++||+||+|+||+++|+|........ ........|.++  ..+|+|+|+.++||+ +
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~--~~~~~dva~~i~~l~-s  227 (247)
T 3lyl_A          152 TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQ-KSFIATKIPSGQ--IGEPKDIAAAVAFLA-S  227 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHH-HHHHHTTSTTCC--CBCHHHHHHHHHHHH-S
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHH-HHHHhhcCCCCC--CcCHHHHHHHHHHHh-C
Confidence                     788999999999999999999999999999987654221 111111223333  679999999999996 5


Q ss_pred             CCccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYK  202 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~  202 (222)
                      +...+++|+.|..++
T Consensus       228 ~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          228 EEAKYITGQTLHVNG  242 (247)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             CCcCCccCCEEEECC
Confidence            567899999995443

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.97  E-value=3.1e-30  Score=212.41  Aligned_cols=185  Identities=22%  Similarity=0.225  Sum_probs=144.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC------------hhHHHHHHHHHHHhhhhhcccCCCCCeE
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD------------VEKAETTASEIRKHFEVATSEDKKPGEV   75 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~   75 (222)
                      +|.++++|++|||||++|||+++|+.|+++|++|++++|+            .+.+++..+.++..          +.++
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~   73 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT----------GRRC   73 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT----------TCCE
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc----------CCeE
Confidence            4567899999999999999999999999999999999997            56666766666553          5689


Q ss_pred             EEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH----------------hhh-----------------------
Q psy7936          76 LIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI----------------LSN-----------------------  116 (222)
Q Consensus        76 ~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-----------------------  116 (222)
                      .++++|+++.++++++++++.+.++++|+||||||+..                -+|                       
T Consensus        74 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i  153 (281)
T 3s55_A           74 ISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRI  153 (281)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             EEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence            99999999999999999999999999999999999754                000                       


Q ss_pred             ------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCC------CCC---CCcchhhhH
Q psy7936         117 ------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYM------DDT---YFPGARTLG  163 (222)
Q Consensus       117 ------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~------~~~---~~~~~~~~~  163 (222)
                                              +..|+++++.|++++||+||+|+||+++|+|....      .+.   .........
T Consensus       154 v~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (281)
T 3s55_A          154 VTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESV  233 (281)
T ss_dssp             EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHH
T ss_pred             EEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHH
Confidence                                    78999999999999999999999999999998641      110   000000000


Q ss_pred             -HHHH--HHhcCChHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         164 -RVLM--WWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       164 -~~~~--~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                       ....  ..++.+|+|+|+.++||+ ++...++||+.|..++.
T Consensus       234 ~~~~~~~~~~~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdgG  275 (281)
T 3s55_A          234 FASLHLQYAPFLKPEEVTRAVLFLV-DEASSHITGTVLPIDAG  275 (281)
T ss_dssp             HHHHCSSSCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHhhhccCcCCCCHHHHHHHHHHHc-CCcccCCCCCEEEECCC
Confidence             0000  012579999999999996 55678999999954443

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.97  E-value=1.5e-30  Score=213.79  Aligned_cols=177  Identities=24%  Similarity=0.239  Sum_probs=143.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-------HHHHHHHHHHhhhhhcccCCCCCeEEEEecCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-------AETTASEIRKHFEVATSEDKKPGEVLIKKLDL   82 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~   82 (222)
                      ++|++|++|||||++|||+++|++|+++|++|++++|+.+.       +++..+.++..          +.++.++++|+
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv   71 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA----------GGQGLALKCDI   71 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH----------TSEEEEEECCT
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc----------CCeEEEEeCCC
Confidence            45789999999999999999999999999999999998753       56666666553          66899999999


Q ss_pred             CChhhHHHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------
Q psy7936          83 ASFKSIRDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------  116 (222)
Q Consensus        83 ~~~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------  116 (222)
                      ++.++++++++++.+.++++|++|||||+..                -+|                              
T Consensus        72 ~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~  151 (274)
T 3e03_A           72 REEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPP  151 (274)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChH
Confidence            9999999999999999999999999999753                000                              


Q ss_pred             -------------------HHHHHHHHHhhcCCCCeEEEEEeCC-cccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHH
Q psy7936         117 -------------------NILFYSILFYAIPGKNVNVYAVHPG-IVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 -------------------~~~~~~~la~~~~~~gI~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e  176 (222)
                                         +..|+++++.|++++||+||+|+|| +++|+|........          ..+  ..+|+|
T Consensus       152 ~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~~~----------~~~--~~~ped  219 (274)
T 3e03_A          152 SLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPGVD----------AAA--CRRPEI  219 (274)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------CCC----------GGG--SBCTHH
T ss_pred             hcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhccccc----------ccc--cCCHHH
Confidence                               7889999999999999999999999 69999985433211          112  679999


Q ss_pred             HHHHHHHHhcCCCcccccccccccccccccCCC
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDYKVAKSRNF  209 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~~~~~~~~~  209 (222)
                      +|+.++||+ ++...++||+++.+++...+..+
T Consensus       220 vA~~v~~l~-s~~~~~itG~~i~~~g~~~~~~~  251 (274)
T 3e03_A          220 MADAAHAVL-TREAAGFHGQFLIDDEVLAQAGI  251 (274)
T ss_dssp             HHHHHHHHH-TSCCTTCCSCEEEHHHHHHHTTC
T ss_pred             HHHHHHHHh-CccccccCCeEEEcCcchhhccc
Confidence            999999997 55678999999988777665443

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.97  E-value=1.3e-30  Score=213.62  Aligned_cols=181  Identities=24%  Similarity=0.301  Sum_probs=142.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      +.+++++|++|||||++|||+++|++|+++|++|++++| +.+..+++.+.++..          +.++.++++|+++.+
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~   92 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK----------GYKAAVIKFDAASES   92 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc----------CCceEEEECCCCCHH
Confidence            346789999999999999999999999999999999999 456666666666553          668999999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH----------------hhh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI----------------LSN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~----------------------------------  116 (222)
                      ++.++++++.+.++++|++|||||+..                -+|                                  
T Consensus        93 ~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  172 (271)
T 4iin_A           93 DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG  172 (271)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC
Confidence            999999999999999999999999753                000                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..+++.++.+++++||+||+|+||+++|+|......... .......|+++  ..+|+|+|+.++|
T Consensus       173 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~--~~~p~dvA~~i~~  249 (271)
T 4iin_A          173 NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELK-ADYVKNIPLNR--LGSAKEVAEAVAF  249 (271)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------CGGGCTTCS--CBCHHHHHHHHHH
T ss_pred             CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHH-HHHHhcCCcCC--CcCHHHHHHHHHH
Confidence                         7899999999999999999999999999999876643211 11113334445  7899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+ ++...+++|+.|..++
T Consensus       250 l~-s~~~~~itG~~i~vdG  267 (271)
T 4iin_A          250 LL-SDHSSYITGETLKVNG  267 (271)
T ss_dssp             HH-SGGGTTCCSCEEEEST
T ss_pred             Hh-CCCcCCCcCCEEEeCC
Confidence            96 4457899999995443

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.97  E-value=5.5e-31  Score=213.03  Aligned_cols=177  Identities=20%  Similarity=0.221  Sum_probs=146.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +.+|++|||||++|||+++++.|+++|++|+++++ +.+.++++.+.++..          +.++.++++|+++.+++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~d~~~v~~   71 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK----------GVDSFAIQANVADADEVKA   71 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TSCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHHHH
Confidence            35799999999999999999999999999999887 567788888887663          6688999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++++.+.++++|++|||||+..                -+|                                      
T Consensus        72 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  151 (246)
T 3osu_A           72 MIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQ  151 (246)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC
Confidence            99999999999999999999753                000                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..+++.++.|++++||+||+|+||+++|+|.....+. .........|+++  ..+|+|+|+.+.||+ +
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~p~~r--~~~~~dva~~v~~l~-s  227 (246)
T 3osu_A          152 ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE-LKEQMLTQIPLAR--FGQDTDIANTVAFLA-S  227 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHH-HHHHHHTTCTTCS--CBCHHHHHHHHHHHT-S
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHH-HHHHHHhcCCCCC--CcCHHHHHHHHHHHh-C
Confidence                     78899999999999999999999999999998765321 1111112234444  789999999999996 4


Q ss_pred             CCccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYK  202 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~  202 (222)
                      +...++||+.|..++
T Consensus       228 ~~~~~itG~~i~vdg  242 (246)
T 3osu_A          228 DKAKYITGQTIHVNG  242 (246)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             ccccCCCCCEEEeCC
Confidence            557899999995443

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.97  E-value=1.7e-30  Score=213.64  Aligned_cols=184  Identities=20%  Similarity=0.183  Sum_probs=144.9

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC------------hhHHHHHHHHHHHhhhhhcccCCCC
Q psy7936           5 KAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD------------VEKAETTASEIRKHFEVATSEDKKP   72 (222)
Q Consensus         5 ~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~i~~~~~~~~~~~~~~   72 (222)
                      +..++.+++||++|||||++|||+++|+.|+++|++|++++|+            .+.+++..+.+...          +
T Consensus         4 ~~~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~   73 (278)
T 3sx2_A            4 PRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI----------G   73 (278)
T ss_dssp             -----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH----------T
T ss_pred             CCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc----------C
Confidence            3445567899999999999999999999999999999999987            67777777777653          5


Q ss_pred             CeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHHh------------hh------------------------
Q psy7936          73 GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCIL------------SN------------------------  116 (222)
Q Consensus        73 ~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l------------~~------------------------  116 (222)
                      .++.++++|+++.++++++++++.+.++++|+||||||+...            +|                        
T Consensus        74 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~i  153 (278)
T 3sx2_A           74 SRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSI  153 (278)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred             CeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEE
Confidence            689999999999999999999999999999999999997530            00                        


Q ss_pred             ----------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcc----------
Q psy7936         117 ----------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPG----------  158 (222)
Q Consensus       117 ----------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~----------  158 (222)
                                                  +..|++.++.|++++||+||+|+||+|+|+|........+..          
T Consensus       154 v~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  233 (278)
T 3sx2_A          154 VLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPG  233 (278)
T ss_dssp             EEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--C
T ss_pred             EEEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhh
Confidence                                        788999999999999999999999999999976421100000          


Q ss_pred             hhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         159 ARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       159 ~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ......| .+  ..+|+|+|+.++||+ ++...++||+.|..++
T Consensus       234 ~~~~~~p-~~--~~~p~dvA~~v~~l~-s~~~~~itG~~i~vdG  273 (278)
T 3sx2_A          234 AMGNAMP-VE--VLAPEDVANAVAWLV-SDQARYITGVTLPVDA  273 (278)
T ss_dssp             TTSCSSS-CS--SBCHHHHHHHHHHHT-SGGGTTCCSCEEEEST
T ss_pred             hhhhhcC-cC--cCCHHHHHHHHHHHh-CcccccccCCEEeECC
Confidence            0000011 12  578999999999996 5567899999995444

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.97  E-value=1.2e-30  Score=216.35  Aligned_cols=184  Identities=16%  Similarity=0.116  Sum_probs=139.6

Q ss_pred             CCCCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           8 SASRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      .+..+++|++|||||+  +|||+++|+.|++.|++|++++|+.+..+.+. .+...          ..++.+++||+++.
T Consensus        25 ~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~----------~~~~~~~~~Dv~d~   93 (293)
T 3grk_A           25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVE-PLAEE----------LGAFVAGHCDVADA   93 (293)
T ss_dssp             --CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHH-HHHHH----------HTCEEEEECCTTCH
T ss_pred             ccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HHHHh----------cCCceEEECCCCCH
Confidence            3456899999999999  56999999999999999999999965444433 33332          23678999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHHh--------------------hh-----------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCIL--------------------SN-----------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~l--------------------~~-----------------------------  116 (222)
                      ++++++++.+.+.++++|+||||||+...                    +|                             
T Consensus        94 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A           94 ASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             HHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            99999999999999999999999997520                    00                             


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                      +..|+++++.+++++||+||+|+||+++|+|....... ..........|+++  ..+|+|+|+
T Consensus       174 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedvA~  251 (293)
T 3grk_A          174 EKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRR--TVTIDEVGD  251 (293)
T ss_dssp             TSBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSS--CCCHHHHHH
T ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCC--CCCHHHHHH
Confidence                            78999999999999999999999999999998765421 11111112334445  789999999


Q ss_pred             HHHHHhcCCCcccccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      .++||+ ++...++||+.|..++...
T Consensus       252 ~v~~L~-s~~~~~itG~~i~vdGG~~  276 (293)
T 3grk_A          252 VGLYFL-SDLSRSVTGEVHHADSGYH  276 (293)
T ss_dssp             HHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHc-CccccCCcceEEEECCCcc
Confidence            999997 4567899999995444433

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.97  E-value=2.2e-30  Score=210.33  Aligned_cols=174  Identities=24%  Similarity=0.255  Sum_probs=145.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCC--CChhh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDL--ASFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~   87 (222)
                      ..|++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.+....         +.++.++.+|+  ++.++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~   78 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET---------GRQPQWFILDLLTCTSEN   78 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---------SCCCEEEECCTTTCCHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc---------CCCceEEEEecccCCHHH
Confidence            45789999999999999999999999999999999999999999988887652         44788999999  99999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH-----------------hhh----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI-----------------LSN----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~----------------------------------  116 (222)
                      ++++++.+.+.++++|+||||||+..                 -+|                                  
T Consensus        79 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~  158 (252)
T 3f1l_A           79 CQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG  158 (252)
T ss_dssp             HHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC
Confidence            99999999999999999999999742                 000                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..+++.++.|++++ |+||+|+||+++|+|..........         .+  ..+|+|+|..++|
T Consensus       159 ~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~~~---------~~--~~~p~dva~~~~~  226 (252)
T 3f1l_A          159 RANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDP---------QK--LKTPADIMPLYLW  226 (252)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTCCG---------GG--SBCTGGGHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCccch---------hc--cCCHHHHHHHHHH
Confidence                         899999999999987 9999999999999987543221111         12  6799999999999


Q ss_pred             HhcCCCcccccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      |+ ++...++||+.|..++...
T Consensus       227 L~-s~~~~~itG~~i~vdgG~~  247 (252)
T 3f1l_A          227 LM-GDDSRRKTGMTFDAQPGRK  247 (252)
T ss_dssp             HH-SGGGTTCCSCEEESSCC--
T ss_pred             Hc-CccccCCCCCEEEeCCCcC
Confidence            96 5567899999996555443

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.97  E-value=2.8e-30  Score=207.73  Aligned_cols=167  Identities=17%  Similarity=0.162  Sum_probs=137.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.+.             .++.++++|+++.++++++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~v~~~   67 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-------------NAVIGIVADLAHHEDVDVA   67 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-------------GGEEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-------------CCceEEECCCCCHHHHHHH
Confidence            468999999999999999999999999999999999998888776662             1588999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh----------------hh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL----------------SN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------------  116 (222)
                      ++.+.+.++++|++|||||+...                +|                                       
T Consensus        68 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  147 (235)
T 3l6e_A           68 FAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESL  147 (235)
T ss_dssp             HHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHH
T ss_pred             HHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcH
Confidence            99999999999999999997540                00                                       


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                             +..|+++++.|++++||+||+|+||+++|+|......          .+..+  +.+|+|+|+.+++++.++.
T Consensus       148 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----------~~~~~--~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          148 YCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH----------VDPSG--FMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------------CBCHHHHHHHHHHHTCCCS
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC----------CCCcC--CCCHHHHHHHHHHHHhCCC
Confidence                   8999999999999999999999999999999775432          11223  7899999999999988788


Q ss_pred             cccccccccccccc
Q psy7936         190 AAKETGLYYSDYKV  203 (222)
Q Consensus       190 ~~~~~G~~i~~~~~  203 (222)
                      ..+++|-.+.....
T Consensus       216 ~~~i~~i~~~~~~~  229 (235)
T 3l6e_A          216 SCHVTDLFIGRNEG  229 (235)
T ss_dssp             SEEEEEEEEEECCC
T ss_pred             CcceeeEEEecCCC
Confidence            88999987755443

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.97  E-value=3.5e-30  Score=212.33  Aligned_cols=181  Identities=17%  Similarity=0.176  Sum_probs=145.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC------------hhHHHHHHHHHHHhhhhhcccCCCCCeE
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD------------VEKAETTASEIRKHFEVATSEDKKPGEV   75 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~   75 (222)
                      +|.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++....+..          .+.++
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~   73 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK----------TGRKA   73 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH----------TTSCE
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh----------cCCce
Confidence            4567899999999999999999999999999999999998            6677777766665          36689


Q ss_pred             EEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHHh--------------hh-------------------------
Q psy7936          76 LIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCIL--------------SN-------------------------  116 (222)
Q Consensus        76 ~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l--------------~~-------------------------  116 (222)
                      .++++|+++.++++++++++.+.++++|+||||||+...              +|                         
T Consensus        74 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  153 (287)
T 3pxx_A           74 YTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG  153 (287)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred             EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence            999999999999999999999999999999999997430              00                         


Q ss_pred             -------------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC------CC-CCcc
Q psy7936         117 -------------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD------DT-YFPG  158 (222)
Q Consensus       117 -------------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~------~~-~~~~  158 (222)
                                                     +..+++.++.+++++||+||+|+||+++|+|.....      +. ....
T Consensus       154 S~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  233 (287)
T 3pxx_A          154 SVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPS  233 (287)
T ss_dssp             CHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred             cchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccch
Confidence                                           678899999999999999999999999999986421      10 0000


Q ss_pred             h---h-----hhHHHHHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         159 A---R-----TLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       159 ~---~-----~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .   .     ....| ++  ..+|+|+|+.++||+ ++...++||+.|..++
T Consensus       234 ~~~~~~~~~~~~~~~-~~--~~~p~dva~~v~fL~-s~~a~~itG~~i~vdG  281 (287)
T 3pxx_A          234 RADALLAFPAMQAMP-TP--YVEASDISNAVCFLA-SDESRYVTGLQFKVDA  281 (287)
T ss_dssp             HHHHHHHGGGGCSSS-CS--CBCHHHHHHHHHHHH-SGGGTTCCSCEEEEST
T ss_pred             hHHHHhhhhhhcccC-CC--CCCHHHHHhhHheec-chhhcCCCCceEeECc
Confidence            0   0     00011 22  679999999999996 5567899999995443

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.97  E-value=7.9e-31  Score=215.89  Aligned_cols=182  Identities=23%  Similarity=0.239  Sum_probs=145.3

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ...+++++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++             +.++.++++|+++.+
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~   86 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-------------GSKAFGVRVDVSSAK   86 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-------------CTTEEEEECCTTCHH
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------CCceEEEEecCCCHH
Confidence            4446789999999999999999999999999999999999998887776653             447889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------  116 (222)
                      +++++++.+.+.++++|+||||||+...                +|                                  
T Consensus        87 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  166 (277)
T 4dqx_A           87 DAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA  166 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC
Confidence            9999999999999999999999996530                01                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC-CCCCcch----hhhHHHHHHHhcCChHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD-DTYFPGA----RTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~p~e~a  178 (222)
                                   +..|+++++.|++++||+||+|+||+++|+|..... .......    .....|+++  +.+|+|+|
T Consensus       167 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~pedvA  244 (277)
T 4dqx_A          167 IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDR--MGTAEEIA  244 (277)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCS--CBCHHHHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccC--CcCHHHHH
Confidence                         789999999999999999999999999999843221 1111100    111223444  67999999


Q ss_pred             HHHHHHhcCCCccccccccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~~~~~~  204 (222)
                      +.++||+ ++...++||+.|..++..
T Consensus       245 ~~v~~L~-s~~~~~itG~~i~vdGG~  269 (277)
T 4dqx_A          245 EAMLFLA-SDRSRFATGSILTVDGGS  269 (277)
T ss_dssp             HHHHHHH-SGGGTTCCSCEEEESSSS
T ss_pred             HHHHHHh-CCccCCCcCCEEEECCch
Confidence            9999997 445789999999544433

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.97  E-value=1.9e-30  Score=211.25  Aligned_cols=179  Identities=22%  Similarity=0.192  Sum_probs=136.2

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++             +.++.++++|+++.+++
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   70 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-------------GDAALAVAADISKEADV   70 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------------CTTEEEEECCTTSHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-------------CCceEEEEecCCCHHHH
Confidence            35678999999999999999999999999999999999999888877654             34788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH-----------------hhh-----------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI-----------------LSN-----------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~-----------------------------------  116 (222)
                      +++++++.+.++++|++|||||+..                 -+|                                   
T Consensus        71 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~  150 (261)
T 3n74_A           71 DAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGA  150 (261)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTT
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhh
Confidence            9999999999999999999999743                 000                                   


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---CCcchhhhHHHHHHHhcCChHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---YFPGARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~e~  177 (222)
                                      +..|+++++.|++++||+||+|+||+++|++.......   ..........|.++  +.+|+|+
T Consensus       151 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dv  228 (261)
T 3n74_A          151 GRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGR--LLKPDDL  228 (261)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSS--CCCHHHH
T ss_pred             cCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCC--CcCHHHH
Confidence                            78999999999999999999999999999998755321   11112112334444  7899999


Q ss_pred             HHHHHHHhcCCCcccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+.++||+ ++...++||+.|..++.
T Consensus       229 a~~~~~l~-s~~~~~itG~~i~vdgG  253 (261)
T 3n74_A          229 AEAAAFLC-SPQASMITGVALDVDGG  253 (261)
T ss_dssp             HHHHHHHT-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHc-CCcccCcCCcEEEecCC
Confidence            99999996 55678999999955444

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.97  E-value=7.6e-30  Score=207.87  Aligned_cols=181  Identities=19%  Similarity=0.236  Sum_probs=141.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.++..          +.++.++++|+++.+++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~   71 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL----------GGQCVPVVCDSSQESEVRS   71 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------SSEEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc----------CCceEEEECCCCCHHHHHH
Confidence            367899999999999999999999999999999999999888888887654          4588999999999999999


Q ss_pred             HHHHHHhh-ccceeEEEech--hhH------H--h-------------hh------------------------------
Q psy7936          91 CAQDINQT-EANVHILINNA--VYC------I--L-------------SN------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~-~~~id~li~~a--g~~------~--l-------------~~------------------------------  116 (222)
                      +++.+.+. ++++|+|||||  |+.      .  +             +|                              
T Consensus        72 ~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  151 (260)
T 2qq5_A           72 LFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPG  151 (260)
T ss_dssp             HHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGG
T ss_pred             HHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChh
Confidence            99998876 89999999999  443      0  0             00                              


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-Cc-ch-hh-hHHHHHHHhcCChHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FP-GA-RT-LGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~-~~-~~-~~~~~~~~~~~~p~e  176 (222)
                                      +..+++.++.|++++||+||+|+||+++|+|........ .. .. .. ...++++  ..+|+|
T Consensus       152 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~pe~  229 (260)
T 2qq5_A          152 SLQYMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSS--AETTEL  229 (260)
T ss_dssp             GTSCCSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CH--HHHHHH
T ss_pred             hcCCCCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhcc--CCCHHH
Confidence                            789999999999999999999999999999976532211 10 00 00 1223444  568999


Q ss_pred             HHHHHHHHhcCCCcccccccccccccc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +|+.++||++++...++||++|..++.
T Consensus       230 va~~v~~l~s~~~~~~itG~~i~~~~~  256 (260)
T 2qq5_A          230 SGKCVVALATDPNILSLSGKVLPSCDL  256 (260)
T ss_dssp             HHHHHHHHHTCTTGGGGTTCEEEHHHH
T ss_pred             HHHHHHHHhcCcccccccceeechhhh
Confidence            999999998665446899999976554

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.97  E-value=6.9e-31  Score=213.67  Aligned_cols=175  Identities=19%  Similarity=0.154  Sum_probs=130.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++             +.++.++++|+++.++++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~   69 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-------------GAAVRFRNADVTNEADAT   69 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------------------CEEEECCTTCHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-------------CCceEEEEccCCCHHHHH
Confidence            4578999999999999999999999999999999999998877766554             336789999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-------------------------------------hh--------h--------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-------------------------------------LS--------N--------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-------------------------------------l~--------~--------  116 (222)
                      ++++.+.+.++++|+||||||+..                                     +.        .        
T Consensus        70 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~is  149 (257)
T 3tpc_A           70 AALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTA  149 (257)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEEC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEe
Confidence            999999999999999999999752                                     00        0        


Q ss_pred             --------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHH-HHHhcCChH
Q psy7936         117 --------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVL-MWWWMKTPE  175 (222)
Q Consensus       117 --------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~  175 (222)
                                          +..++++++.|++++||+||+|+||+++|+|........ ........|+ ++  +.+|+
T Consensus       150 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~p~~~r--~~~~~  226 (257)
T 3tpc_A          150 SIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDV-QDALAASVPFPPR--LGRAE  226 (257)
T ss_dssp             CTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CCSSSSCS--CBCHH
T ss_pred             chhhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHH-HHHHHhcCCCCCC--CCCHH
Confidence                                789999999999999999999999999999987654321 1111122333 44  78999


Q ss_pred             HHHHHHHHHhcCCCcccccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+|+.+.||+++   .++||+.|..++.
T Consensus       227 dva~~v~~l~s~---~~itG~~i~vdGG  251 (257)
T 3tpc_A          227 EYAALVKHICEN---TMLNGEVIRLDGA  251 (257)
T ss_dssp             HHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred             HHHHHHHHHccc---CCcCCcEEEECCC
Confidence            999999999853   6999999954443

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.97  E-value=1.8e-30  Score=214.49  Aligned_cols=174  Identities=21%  Similarity=0.167  Sum_probs=144.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh-------HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-------KAETTASEIRKHFEVATSEDKKPGEVLIKKLDL   82 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~-------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~   82 (222)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+       .++++.+.+...          +.++.+++||+
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv   74 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA----------GGQALPIVGDI   74 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH----------TSEEEEEECCT
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc----------CCcEEEEECCC
Confidence            4578999999999999999999999999999999999976       466777777654          56899999999


Q ss_pred             CChhhHHHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------
Q psy7936          83 ASFKSIRDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------  116 (222)
Q Consensus        83 ~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------  116 (222)
                      ++.++++++++++.+.++++|++|||||+...                +|                              
T Consensus        75 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~  154 (285)
T 3sc4_A           75 RDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPI  154 (285)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChh
Confidence            99999999999999999999999999997540                01                              


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCC-cccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHH
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPG-IVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~  177 (222)
                                        +..|+++|+.|++++||+||+|+|| +++|+|.........        ++++  ..+|+|+
T Consensus       155 ~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~~~--------~~~r--~~~pedv  224 (285)
T 3sc4_A          155 RLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDE--------AMAR--SRKPEVY  224 (285)
T ss_dssp             CCSGGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTSCC--------CCTT--CBCTHHH
T ss_pred             hccCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccccc--------cccC--CCCHHHH
Confidence                              7899999999999999999999999 689998764322111        1223  6899999


Q ss_pred             HHHHHHHhcCCCcccccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      |+.++||++++ . ++||+.+..++...
T Consensus       225 A~~~~~l~s~~-~-~~tG~~i~~dgg~~  250 (285)
T 3sc4_A          225 ADAAYVVLNKP-S-SYTGNTLLCEDVLL  250 (285)
T ss_dssp             HHHHHHHHTSC-T-TCCSCEEEHHHHHH
T ss_pred             HHHHHHHhCCc-c-cccceEEEEcCchh
Confidence            99999997554 4 99999995554433

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.97  E-value=1.2e-30  Score=213.39  Aligned_cols=184  Identities=17%  Similarity=0.112  Sum_probs=147.2

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..+|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+....        ++.++.++++|+++.+++
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~v   79 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA--------PDAEVLTTVADVSDEAQV   79 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC--------TTCCEEEEECCTTSHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--------CCceEEEEEccCCCHHHH
Confidence            355889999999999999999999999999999999999998888888776542        255789999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh-----------------hh-----------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL-----------------SN-----------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l-----------------~~-----------------------------------  116 (222)
                      +++++.+.+.++++|+||||||+...                 +|                                   
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  159 (267)
T 1iy8_A           80 EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI  159 (267)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC
Confidence            99999999999999999999986420                 00                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCC--C-CCCCcc----hhhhHHHHHHHhcCChHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYM--D-DTYFPG----ARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~--~-~~~~~~----~~~~~~~~~~~~~~~p~e~  177 (222)
                                  +..+++.++.|++++||+||+|+||+++|+|....  . ......    ......|+++  ..+|+|+
T Consensus       160 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~~~dv  237 (267)
T 1iy8_A          160 GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKR--YGEAPEI  237 (267)
T ss_dssp             SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCS--CBCHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCC--CcCHHHH
Confidence                        78899999999999999999999999999986542  1 111111    1111123444  6799999


Q ss_pred             HHHHHHHhcCCCcccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+.++||+ ++...+++|+.+..++.
T Consensus       238 A~~v~~l~-s~~~~~~tG~~i~vdGG  262 (267)
T 1iy8_A          238 AAVVAFLL-SDDASYVNATVVPIDGG  262 (267)
T ss_dssp             HHHHHHHT-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHc-CccccCCCCCEEEECCC
Confidence            99999996 45577999999954443

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.97  E-value=3.1e-30  Score=211.22  Aligned_cols=179  Identities=18%  Similarity=0.190  Sum_probs=143.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe-CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +++|++|||||++|||++++++|+++|++|++++ |+.+..++..+.+..          .+.++.++.+|+++.+++++
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~~v~~   92 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD----------AGRDFKAYAVDVADFESCER   92 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT----------TTCCCEEEECCTTCHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh----------cCCceEEEEecCCCHHHHHH
Confidence            5789999999999999999999999999999998 666666666666544          35689999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++.+.+.++++|+||||||+..                -+|                                      
T Consensus        93 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  172 (269)
T 3gk3_A           93 CAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQ  172 (269)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCc
Confidence            99999999999999999999753                000                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..|++.++.+++++||+||+|+||+++|+|.................+.++  ..+|+|+|+.++||+ +
T Consensus       173 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~~~p~dvA~~v~~L~-s  249 (269)
T 3gk3_A          173 ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGR--LGRPDEVAALIAFLC-S  249 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSS--CBCHHHHHHHHHHHT-S
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCC--ccCHHHHHHHHHHHh-C
Confidence                     7889999999999999999999999999999887654322212213344555  679999999999996 4


Q ss_pred             CCcccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYKV  203 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~~  203 (222)
                      +...++||+.|..++.
T Consensus       250 ~~~~~itG~~i~vdgG  265 (269)
T 3gk3_A          250 DDAGFVTGADLAINGG  265 (269)
T ss_dssp             TTCTTCCSCEEEESTT
T ss_pred             CCcCCeeCcEEEECCC
Confidence            4678999999954443

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.97  E-value=3e-30  Score=211.80  Aligned_cols=181  Identities=22%  Similarity=0.169  Sum_probs=141.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.+...          +.++.++++|+++.++++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~   86 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK----------GLNVEGSVCDLLSRTERD   86 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCceEEEECCCCCHHHHH
Confidence            4578999999999999999999999999999999999999888888777653          557889999999999999


Q ss_pred             HHHHHHHhhc-cceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          90 DCAQDINQTE-ANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~-~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      ++++.+.+.+ +++|+||||||+...                +|                                    
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  166 (273)
T 1ae1_A           87 KLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP  166 (273)
T ss_dssp             HHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC
Confidence            9999999998 999999999997430                00                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-----CCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-----YFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                 +..+++.++.|++++||+||+|+||+++|+|.......     ..........|+++  +.+|+|+|+.
T Consensus       167 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dvA~~  244 (273)
T 1ae1_A          167 SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGR--AGKPQEVSAL  244 (273)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCS--CBCHHHHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCC--CcCHHHHHHH
Confidence                       78899999999999999999999999999997653220     00111111223334  6799999999


Q ss_pred             HHHHhcCCCcccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +.||+ ++...+++|+.+..++.
T Consensus       245 v~~l~-s~~~~~~tG~~i~vdGG  266 (273)
T 1ae1_A          245 IAFLC-FPAASYITGQIIWADGG  266 (273)
T ss_dssp             HHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHh-CccccCcCCCEEEECCC
Confidence            99996 45678999999954443

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=1.1e-30  Score=212.04  Aligned_cols=172  Identities=22%  Similarity=0.246  Sum_probs=146.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCC-CeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKP-GEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~   89 (222)
                      ++++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++....        ++ .++.++++|+++.+++.
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~   75 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSN--------KHVQEPIVLPLDITDCTKAD   75 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHC--------TTSCCCEEEECCTTCHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc--------cccCcceEEeccCCCHHHHH
Confidence            4789999999999999999999999999999999999999999988887652        23 67899999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH---------------hhh--------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI---------------LSN--------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~---------------l~~--------------------------------------  116 (222)
                      ++++++.+.++++|+||||||+..               -+|                                      
T Consensus        76 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  155 (250)
T 3nyw_A           76 TEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADG  155 (250)
T ss_dssp             HHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCT
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCC
Confidence            999999999999999999999742               000                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..|+++++.+++++||+||+|+||+++|+|........         +..+  +.+|+|+|+.++||+++
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---------~~~~--~~~p~dva~~v~~l~s~  224 (250)
T 3nyw_A          156 GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPF---------KDEE--MIQPDDLLNTIRCLLNL  224 (250)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCCS---------CGGG--SBCHHHHHHHHHHHHTS
T ss_pred             cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCCc---------cccc--CCCHHHHHHHHHHHHcC
Confidence                     788999999999999999999999999999976543211         1122  68999999999999987


Q ss_pred             CCcccccccccccc
Q psy7936         188 EGAAKETGLYYSDY  201 (222)
Q Consensus       188 ~~~~~~~G~~i~~~  201 (222)
                      +...+++|..|..+
T Consensus       225 ~~~~~~~~~~i~vd  238 (250)
T 3nyw_A          225 SENVCIKDIVFEMK  238 (250)
T ss_dssp             CTTEECCEEEEEEH
T ss_pred             CCceEeeEEEEEee
Confidence            77778888888433

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.97  E-value=1.3e-30  Score=214.24  Aligned_cols=181  Identities=24%  Similarity=0.250  Sum_probs=143.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .++++++|++|||||++|||+++|+.|+++|++|++++|+ +.+++..+++..          .+.++.++++|+++.++
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~----------~~~~~~~~~~Dv~d~~~   93 (273)
T 3uf0_A           25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIAD----------GGGSAEAVVADLADLEG   93 (273)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHT----------TTCEEEEEECCTTCHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHh----------cCCcEEEEEecCCCHHH
Confidence            3467899999999999999999999999999999999966 455666666654          36689999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      ++++.+.+ +.++++|+||||||+...                +|                                   
T Consensus        94 v~~~~~~~-~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~  172 (273)
T 3uf0_A           94 AANVAEEL-AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG  172 (273)
T ss_dssp             HHHHHHHH-HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHH-HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC
Confidence            99995554 556899999999997640                00                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..|+++++.|++++||+||+|+||+++|+|....... ..........|+++  +.+|+|+|+.++|
T Consensus       173 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedva~~v~~  250 (273)
T 3uf0_A          173 RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGR--WATPEDMVGPAVF  250 (273)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSS--CBCGGGGHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCC--CCCHHHHHHHHHH
Confidence                        88999999999999999999999999999987654321 11111112334444  7899999999999


Q ss_pred             HhcCCCcccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+ ++...++||+.|..++.
T Consensus       251 L~-s~~a~~itG~~i~vdGG  269 (273)
T 3uf0_A          251 LA-SDAASYVHGQVLAVDGG  269 (273)
T ss_dssp             HH-SGGGTTCCSCEEEESTT
T ss_pred             Hh-CchhcCCcCCEEEECcC
Confidence            97 45678999999954443

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.97  E-value=1.2e-30  Score=212.86  Aligned_cols=178  Identities=17%  Similarity=0.137  Sum_probs=145.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+...          +.++.++++|+++.+++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~   73 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK----------GVEARSYVCDVTSEEAVIG   73 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------TSCEEEEECCTTCHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEecCCCHHHHHH
Confidence            478999999999999999999999999999999999999888888777653          5578999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhH-H----------------hhh-------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYC-I----------------LSN-------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~-~----------------l~~-------------------------------------  116 (222)
                      +++.+.+.++++|+||||||+. .                -+|                                     
T Consensus        74 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  153 (262)
T 1zem_A           74 TVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN  153 (262)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC
Confidence            9999999999999999999975 1                000                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCC------------CC-C-C-CcchhhhHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYM------------DD-T-Y-FPGARTLGRVLMWWWM  171 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~------------~~-~-~-~~~~~~~~~~~~~~~~  171 (222)
                                +..+++.++.+++++||+||+|+||+++|+|....            .. . . .........|+++  +
T Consensus       154 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~  231 (262)
T 1zem_A          154 MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRR--Y  231 (262)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSS--C
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCC--C
Confidence                      77899999999999999999999999999986542            11 0 0 1011111234444  7


Q ss_pred             CChHHHHHHHHHHhcCCCcccccccccccc
Q psy7936         172 KTPEQGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       172 ~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      .+|+|+|+.++||++ +...++||+.+..+
T Consensus       232 ~~p~dvA~~v~~l~s-~~~~~itG~~i~vd  260 (262)
T 1zem_A          232 GDINEIPGVVAFLLG-DDSSFMTGVNLPIA  260 (262)
T ss_dssp             BCGGGSHHHHHHHHS-GGGTTCCSCEEEES
T ss_pred             cCHHHHHHHHHHHcC-chhcCcCCcEEecC
Confidence            899999999999974 45789999999544

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.97  E-value=2.4e-30  Score=210.73  Aligned_cols=190  Identities=19%  Similarity=0.166  Sum_probs=146.4

Q ss_pred             CCcCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEec
Q psy7936           1 MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKL   80 (222)
Q Consensus         1 ~~~~~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (222)
                      |++.....+..|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+...          +.++.++.+
T Consensus         1 m~~~~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~   70 (260)
T 2zat_A            1 MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE----------GLSVTGTVC   70 (260)
T ss_dssp             ---------CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEEC
T ss_pred             CCCcccccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCceEEEEc
Confidence            4555555566789999999999999999999999999999999999999888888777653          557889999


Q ss_pred             CCCChhhHHHHHHHHHhhccceeEEEechhhHH-----------------hhh---------------------------
Q psy7936          81 DLASFKSIRDCAQDINQTEANVHILINNAVYCI-----------------LSN---------------------------  116 (222)
Q Consensus        81 D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~---------------------------  116 (222)
                      |+++.++++++++.+.+.++++|++|||||+..                 -+|                           
T Consensus        71 D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~is  150 (260)
T 2zat_A           71 HVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVS  150 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEe
Confidence            999999999999999999999999999999631                 000                           


Q ss_pred             --------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChH
Q psy7936         117 --------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 --------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~  175 (222)
                                          +..+++.++.+++++||+||+|+||+++|+|....... ..........|+++  ..+|+
T Consensus       151 S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  228 (260)
T 2zat_A          151 SVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRR--LGNPE  228 (260)
T ss_dssp             CGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSS--CBCGG
T ss_pred             chhhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCC--CCCHH
Confidence                                78899999999999999999999999999986532111 00011111223333  68999


Q ss_pred             HHHHHHHHHhcCCCcccccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+|+.+.||+ ++...+++|+.+..++.
T Consensus       229 dva~~v~~l~-s~~~~~~tG~~~~vdgG  255 (260)
T 2zat_A          229 DCAGIVSFLC-SEDASYITGETVVVGGG  255 (260)
T ss_dssp             GGHHHHHHHT-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHc-CcccCCccCCEEEECCC
Confidence            9999999996 44567999999955443

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.97  E-value=5.6e-30  Score=209.14  Aligned_cols=188  Identities=15%  Similarity=0.152  Sum_probs=147.7

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          10 SRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +++++|++|||||+  +|||+++|++|+++|++|++++|+....+.+.+.....         +..++.+++||+++.++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~   73 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL---------DRNDSIILPCDVTNDAE   73 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS---------SSCCCEEEECCCSSSHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc---------CCCCceEEeCCCCCHHH
Confidence            46789999999999  67999999999999999999999976555554444332         23478999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh--------------------hh-------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL--------------------SN-------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l--------------------~~-------------------------------  116 (222)
                      ++++++++.+.++++|++|||||+...                    +|                               
T Consensus        74 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~  153 (266)
T 3oig_A           74 IETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL  153 (266)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS
T ss_pred             HHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc
Confidence            999999999999999999999986420                    00                               


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                    +..|++.++.|++++||+||+|+||+++|+|....... ..........|+++  ..+|+|+|+.+
T Consensus       154 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~dva~~v  231 (266)
T 3oig_A          154 VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRR--TTTPEEVGDTA  231 (266)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSS--CCCHHHHHHHH
T ss_pred             cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCC--CCCHHHHHHHH
Confidence                          78999999999999999999999999999998765431 11111112223334  67999999999


Q ss_pred             HHHhcCCCcccccccccc-cccccccCCC
Q psy7936         182 LHCALDEGAAKETGLYYS-DYKVAKSRNF  209 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~-~~~~~~~~~~  209 (222)
                      +||++ +...+++|+.|. ++|.......
T Consensus       232 ~~l~s-~~~~~~tG~~i~vdGG~~~~~~~  259 (266)
T 3oig_A          232 AFLFS-DMSRGITGENLHVDSGFHITARL  259 (266)
T ss_dssp             HHHHS-GGGTTCCSCEEEESTTGGGCCCC
T ss_pred             HHHcC-CchhcCcCCEEEECCCeEEeeec
Confidence            99974 457899999994 5555444433

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.97  E-value=3.8e-30  Score=208.04  Aligned_cols=177  Identities=22%  Similarity=0.281  Sum_probs=145.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      |++|+++||||++|||+++++.|+++|++|++++| +.+.++++.++++..          +.++.++++|+++.+++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~   71 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL----------GSDAIAVRADVANAEDVTN   71 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHHHH
Confidence            57899999999999999999999999999999999 888888888777653          4578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||+...                +|                                      
T Consensus        72 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  151 (246)
T 2uvd_A           72 MVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQ  151 (246)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTB
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCC
Confidence            999999999999999999996430                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..+++.++.|++++||+||+|+||+++|+|....... .........|.++  +.+|+|+|+.++||+ +
T Consensus       152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~p~~~--~~~~~dvA~~~~~l~-s  227 (246)
T 2uvd_A          152 ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDEN-IKAEMLKLIPAAQ--FGEAQDIANAVTFFA-S  227 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTT-HHHHHHHTCTTCS--CBCHHHHHHHHHHHH-S
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHH-HHHHHHhcCCCCC--CcCHHHHHHHHHHHc-C
Confidence                     78899999999999999999999999999997654321 1111111123334  689999999999997 5


Q ss_pred             CCccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYK  202 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~  202 (222)
                      +...+++|+.+..++
T Consensus       228 ~~~~~~tG~~~~vdg  242 (246)
T 2uvd_A          228 DQSKYITGQTLNVDG  242 (246)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             chhcCCCCCEEEECc
Confidence            557899999995444

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.97  E-value=1.1e-29  Score=206.21  Aligned_cols=173  Identities=18%  Similarity=0.120  Sum_probs=129.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.++++..          +.++.+++||+++.++++
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~   72 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA----------GGRIVARSLDARNEDEVT   72 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT----------TCEEEEEECCTTCHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCeEEEEECcCCCHHHHH
Confidence            3578999999999999999999999999999999999999999999888764          568999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----------------hhh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----------------LSN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----------------l~~-------------------------------------  116 (222)
                      ++++.+.+. +++|++|||||+..                -+|                                     
T Consensus        73 ~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  151 (252)
T 3h7a_A           73 AFLNAADAH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSG  151 (252)
T ss_dssp             HHHHHHHHH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTT
T ss_pred             HHHHHHHhh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCC
Confidence            999999888 99999999999743                000                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEE-EEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ----------NILFYSILFYAIPGKNVNV-YAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v-~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                +..|+++++.|++++||+| |+|+||+++|+|.....+... .......|.+   ..+|+|+|+.++||+
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~---~~~pedvA~~~~~l~  227 (252)
T 3h7a_A          152 FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMF-GKDALANPDL---LMPPAAVAGAYWQLY  227 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CCHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhh-hhhhhcCCcc---CCCHHHHHHHHHHHH
Confidence                      7899999999999999999 999999999999887543221 1111222332   689999999999998


Q ss_pred             cCCCccccccccc
Q psy7936         186 LDEGAAKETGLYY  198 (222)
Q Consensus       186 ~~~~~~~~~G~~i  198 (222)
                      +++. ...+|+..
T Consensus       228 s~~~-~~~~~~i~  239 (252)
T 3h7a_A          228 QQPK-SAWTFEME  239 (252)
T ss_dssp             HCCG-GGBCSEEE
T ss_pred             hCch-hcceeeEE
Confidence            7654 56666654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.97  E-value=1.3e-29  Score=204.63  Aligned_cols=171  Identities=20%  Similarity=0.261  Sum_probs=142.8

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCC--CCh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDL--ASF   85 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~--~~~   85 (222)
                      +...+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.++..         ...++.++.+|+  ++.
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~d~d~~~~   78 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA---------GQPQPLIIALNLENATA   78 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------TSCCCEEEECCTTTCCH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc---------CCCCceEEEeccccCCH
Confidence            345689999999999999999999999999999999999999999999888765         234556666666  999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH-----------------hhh--------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI-----------------LSN--------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~--------------------------------  116 (222)
                      ++++++++.+.+.++++|++|||||+..                 -+|                                
T Consensus        79 ~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~  158 (247)
T 3i1j_A           79 QQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGR  158 (247)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhc
Confidence            9999999999999999999999999742                 000                                


Q ss_pred             ---------------HHHHHHHHHhhcCC-CCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPG-KNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~-~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                     +..+++.++.++++ +||+||+|+||+++|+|.....+....         .+  ..+|+|+|+.
T Consensus       159 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~---------~~--~~~p~dva~~  227 (247)
T 3i1j_A          159 KGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDENP---------LN--NPAPEDIMPV  227 (247)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTSCG---------GG--SCCGGGGTHH
T ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccccCc---------cC--CCCHHHHHHH
Confidence                           78999999999977 899999999999999997654322111         11  5789999999


Q ss_pred             HHHHhcCCCcccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~  199 (222)
                      ++||+ +++..++||+.|.
T Consensus       228 ~~~l~-s~~~~~itG~~i~  245 (247)
T 3i1j_A          228 YLYLM-GPDSTGINGQALN  245 (247)
T ss_dssp             HHHHH-SGGGTTCCSCEEE
T ss_pred             HHHHh-CchhccccCeeec
Confidence            99996 5567899999884

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.97  E-value=7e-30  Score=208.07  Aligned_cols=180  Identities=22%  Similarity=0.193  Sum_probs=145.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++|++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...          +.++.++++|+++.++++
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~   74 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK----------GFKVEASVCDLSSRSERQ   74 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCEEEEEECCTTCHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHHH
Confidence            4578999999999999999999999999999999999999888888777653          558899999999999999


Q ss_pred             HHHHHHHhhc-cceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          90 DCAQDINQTE-ANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~-~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      ++++.+.+.+ +++|++|||||+..                -+|                                    
T Consensus        75 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  154 (260)
T 2ae2_A           75 ELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP  154 (260)
T ss_dssp             HHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC
Confidence            9999999998 89999999999642                000                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-Ccc---hhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FPG---ARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                 +..+++.++.+++++||+||+|+||+++|+|........ ...   ......|+++  ..+|+|+|+.+
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dvA~~v  232 (260)
T 2ae2_A          155 YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRR--MGEPKELAAMV  232 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCS--CBCHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCC--CCCHHHHHHHH
Confidence                       789999999999999999999999999999865432111 000   0001123333  67999999999


Q ss_pred             HHHhcCCCccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +||+ ++...+++|+.+..++
T Consensus       233 ~~l~-s~~~~~~tG~~~~vdg  252 (260)
T 2ae2_A          233 AFLC-FPAASYVTGQIIYVDG  252 (260)
T ss_dssp             HHHH-SGGGTTCCSCEEEEST
T ss_pred             HHHc-CccccCCCCCEEEECC
Confidence            9997 4456799999995443

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.8e-30  Score=214.19  Aligned_cols=177  Identities=18%  Similarity=0.104  Sum_probs=138.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..++||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++....         +..+.++++|++|.++++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~d~~~v~   99 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT---------GNIVRAVVCDVGDPDQVA   99 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---------SSCEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---------CCeEEEEEcCCCCHHHHH
Confidence            45789999999999999999999999999999999999999999988887652         445689999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh-----------------hh------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL-----------------SN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l-----------------~~------------------------------------  116 (222)
                      ++++.+.+.++++|+||||||+...                 +|                                    
T Consensus       100 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~  179 (281)
T 4dry_A          100 ALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP  179 (281)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC
Confidence            9999999999999999999997420                 00                                    


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..++++++.|++++||+||+|+||+++|+|.......... .. ...+..+  ..+|+|+|+.++|
T Consensus       180 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~-~~~~~~~--~~~pedvA~~v~f  255 (281)
T 4dry_A          180 RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQ-AN-GEVAAEP--TIPIEHIAEAVVY  255 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEEC-TT-SCEEECC--CBCHHHHHHHHHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhh-hh-hcccccC--CCCHHHHHHHHHH
Confidence                         78999999999999999999999999999998765432110 00 1112223  6799999999999


Q ss_pred             HhcCCCcccccccccc
Q psy7936         184 CALDEGAAKETGLYYS  199 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~  199 (222)
                      |++.+....+++..+.
T Consensus       256 L~s~~~~~~i~~~~i~  271 (281)
T 4dry_A          256 MASLPLSANVLTMTVM  271 (281)
T ss_dssp             HHHSCTTEEEEEEEEE
T ss_pred             HhCCCccCccccEEEE
Confidence            9988877777777663

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.96  E-value=3.3e-29  Score=204.35  Aligned_cols=198  Identities=20%  Similarity=0.175  Sum_probs=141.3

Q ss_pred             CCcCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEec
Q psy7936           1 MSASKAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKL   80 (222)
Q Consensus         1 ~~~~~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (222)
                      |.+....+.+.+++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.++..          +.++.++.+
T Consensus         1 ~~~~~~~~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~   70 (266)
T 1xq1_A            1 MAGAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK----------GFQVTGSVC   70 (266)
T ss_dssp             ------CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEEC
T ss_pred             CCccccCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCeeEEEEC
Confidence            3444444556789999999999999999999999999999999999999888888777653          457889999


Q ss_pred             CCCChhhHHHHHHHHHhhc-cceeEEEechhhHHh----------------hh---------------------------
Q psy7936          81 DLASFKSIRDCAQDINQTE-ANVHILINNAVYCIL----------------SN---------------------------  116 (222)
Q Consensus        81 D~~~~~~v~~~~~~i~~~~-~~id~li~~ag~~~l----------------~~---------------------------  116 (222)
                      |+++.++++++++.+.+.+ +++|++|||||....                +|                           
T Consensus        71 D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~is  150 (266)
T 1xq1_A           71 DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMS  150 (266)
T ss_dssp             CTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence            9999999999999998888 899999999996430                00                           


Q ss_pred             --------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHH
Q psy7936         117 --------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 --------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e  176 (222)
                                          +..+++.++.+++++||+||+|+||++.|++........+........|+++  ..+|+|
T Consensus       151 S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d  228 (266)
T 1xq1_A          151 SIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGR--FGEPEE  228 (266)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGG
T ss_pred             cchhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCC--CcCHHH
Confidence                                6889999999999899999999999999999765432222222212345555  789999


Q ss_pred             HHHHHHHHhcCCCcccccccccccccccccCCCcc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDYKVAKSRNFPF  211 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~~~~~~~~~~~  211 (222)
                      +|+.+.+|+ ++...+++|+.+..++......+.+
T Consensus       229 va~~~~~l~-~~~~~~~~G~~~~v~gG~~~~~~~~  262 (266)
T 1xq1_A          229 VSSLVAFLC-MPAASYITGQTICVDGGLTVNGFSY  262 (266)
T ss_dssp             GHHHHHHHT-SGGGTTCCSCEEECCCCEEETTEEE
T ss_pred             HHHHHHHHc-CccccCccCcEEEEcCCccccccCC
Confidence            999999996 4456799999995544443334433

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.96  E-value=1.2e-29  Score=206.71  Aligned_cols=179  Identities=24%  Similarity=0.253  Sum_probs=139.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      |++|++|||||++|||+++++.|+++|++|++++|+.+. ++++.+.+....         +.++.++.+|+++.+++++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~v~~   72 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH---------GVKVLYDGADLSKGEAVRG   72 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH---------TSCEEEECCCTTSHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc---------CCcEEEEECCCCCHHHHHH
Confidence            578999999999999999999999999999999999887 888877776531         4578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++.+.+.++++|+||||||+..                -+|                                      
T Consensus        73 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  152 (260)
T 1x1t_A           73 LVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK  152 (260)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCC
Confidence            99999999999999999998643                000                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC----------CCcchh-hhHHHHHHHhcCChHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT----------YFPGAR-TLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~----------~~~~~~-~~~~~~~~~~~~~p~e  176 (222)
                               +..+++.++.+++++||+||+|+||+++|+|.......          ...... ....|.++  +.+|+|
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~p~d  230 (260)
T 1x1t_A          153 SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ--FVTPEQ  230 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCC--CBCHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCC--CcCHHH
Confidence                     78899999999999999999999999999997653210          111111 11223334  689999


Q ss_pred             HHHHHHHHhcCCCccccccccccccc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+.++||++ +...+++|+.+..++
T Consensus       231 va~~~~~l~s-~~~~~~tG~~~~vdg  255 (260)
T 1x1t_A          231 LGGTAVFLAS-DAAAQITGTTVSVDG  255 (260)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhC-hhhcCCCCCEEEECC
Confidence            9999999974 456799999995443

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.96  E-value=2.1e-29  Score=205.57  Aligned_cols=171  Identities=25%  Similarity=0.288  Sum_probs=136.3

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+|..+++|++|||||++|||+++|++|++.|++|++++|+.+.++++.+.+...          +.++.++.+|+++.+
T Consensus        22 ~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~   91 (262)
T 3rkr_A           22 KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA----------GGEAESHACDLSHSD   91 (262)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCEEEEEECCTTCHH
T ss_pred             chhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh----------CCceeEEEecCCCHH
Confidence            4466788999999999999999999999999999999999999999998888763          568999999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH-----------------hhh---------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI-----------------LSN---------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~---------------------------------  116 (222)
                      ++.++++.+.+.++++|+||||||+..                 -+|                                 
T Consensus        92 ~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  171 (262)
T 3rkr_A           92 AIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN  171 (262)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC
Confidence            999999999999999999999999721                 000                                 


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                    +..++++++.+++++||+||+|+||+++|+|......         ..+..+  ..+|+|+|+.+.
T Consensus       172 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~--~~~p~dvA~~v~  240 (262)
T 3rkr_A          172 PVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA---------KKSALG--AIEPDDIADVVA  240 (262)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------CCCHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc---------cccccc--CCCHHHHHHHHH
Confidence                          7889999999999999999999999999999876542         123333  689999999999


Q ss_pred             HHhcCCCcccccccccc
Q psy7936         183 HCALDEGAAKETGLYYS  199 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~  199 (222)
                      ||++++ ...++|+.+.
T Consensus       241 ~l~s~~-~~~~~g~~~i  256 (262)
T 3rkr_A          241 LLATQA-DQSFISEVLV  256 (262)
T ss_dssp             HHHTCC-TTCCEEEEEE
T ss_pred             HHhcCc-cccccCcEEe
Confidence            997554 5678888774

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.96  E-value=8.4e-30  Score=211.07  Aligned_cols=181  Identities=14%  Similarity=0.116  Sum_probs=144.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe-CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      +|++|++|++|||||++|||+++++.|+++|++|++++ |+.+.++++.+.++..         .+.++.++++|+++.+
T Consensus         3 ~m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~Dl~~~~   73 (291)
T 1e7w_A            3 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR---------RPNSAITVQADLSNVA   73 (291)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---------STTCEEEEECCCSSSC
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhh---------cCCeeEEEEeecCCcc
Confidence            34568899999999999999999999999999999999 9999988888888633         2568899999999999


Q ss_pred             -----------------hHHHHHHHHHhhccceeEEEechhhH-----------------------H-------------
Q psy7936          87 -----------------SIRDCAQDINQTEANVHILINNAVYC-----------------------I-------------  113 (222)
Q Consensus        87 -----------------~v~~~~~~i~~~~~~id~li~~ag~~-----------------------~-------------  113 (222)
                                       +++++++.+.+.++++|+||||||+.                       .             
T Consensus        74 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g  153 (291)
T 1e7w_A           74 TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIA  153 (291)
T ss_dssp             BCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHH
T ss_pred             cccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHH
Confidence                             99999999999999999999999853                       1             


Q ss_pred             -----------hh---------h---------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCC
Q psy7936         114 -----------LS---------N---------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTE  146 (222)
Q Consensus       114 -----------l~---------~---------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~  146 (222)
                                 +.         .                           +..|+++++.+++++||+||+|+||+++|+
T Consensus       154 ~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~  233 (291)
T 1e7w_A          154 PYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV  233 (291)
T ss_dssp             HHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCC
Confidence                       00         1                           788999999999999999999999999999


Q ss_pred             cCCCCCCCCCcchhhhHHHHH-HHhcCChHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         147 LGRYMDDTYFPGARTLGRVLM-WWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      | . .. ...........|++ +  ..+|+|+|+.++||++ +...++||+++..++.
T Consensus       234 ~-~-~~-~~~~~~~~~~~p~~~r--~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG  285 (291)
T 1e7w_A          234 D-D-MP-PAVWEGHRSKVPLYQR--DSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGG  285 (291)
T ss_dssp             G-G-SC-HHHHHHHHTTCTTTTS--CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             c-c-CC-HHHHHHHHhhCCCCCC--CCCHHHHHHHHHHHhC-CcccCccCcEEEECCC
Confidence            9 4 32 11111111112443 4  7899999999999974 5578999999954443

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.96  E-value=1.1e-29  Score=207.72  Aligned_cols=181  Identities=25%  Similarity=0.242  Sum_probs=143.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....        ++..+.++.+|+++.++++
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~D~~~~~~~~   77 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY--------PDAILQPVVADLGTEQGCQ   77 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC--------TTCEEEEEECCTTSHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC--------CCceEEEEecCCCCHHHHH
Confidence            46889999999999999999999999999999999999999999988887653        3568889999999999988


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----------------hhh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----------------LSN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----------------l~~-------------------------------------  116 (222)
                      ++++    .++++|++|||||+..                -+|                                     
T Consensus        78 ~~~~----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  153 (267)
T 3t4x_A           78 DVIE----KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE  153 (267)
T ss_dssp             HHHH----HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT
T ss_pred             HHHH----hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc
Confidence            7754    4689999999999754                000                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC----CCC-Cc-chhhh--H------HHHHHHhcC
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD----DTY-FP-GARTL--G------RVLMWWWMK  172 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~----~~~-~~-~~~~~--~------~~~~~~~~~  172 (222)
                                +..++++++.+++++||+||+|+||+++|++.....    +.. .. .....  .      .|+++  +.
T Consensus       154 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~  231 (267)
T 3t4x_A          154 MAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQR--LI  231 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCS--CB
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccC--cc
Confidence                      789999999999999999999999999999765321    110 00 00000  0      12234  78


Q ss_pred             ChHHHHHHHHHHhcCCCcccccccccccccccc
Q psy7936         173 TPEQGAQTTLHCALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       173 ~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      +|+|+|+.++||+ ++...++||+.|..++...
T Consensus       232 ~pedvA~~v~fL~-s~~~~~itG~~i~vdGG~~  263 (267)
T 3t4x_A          232 RPEEIAHLVTFLS-SPLSSAINGSALRIDGGLV  263 (267)
T ss_dssp             CTHHHHHHHHHHH-SGGGTTCCSCEEEESTTCS
T ss_pred             CHHHHHHHHHHHc-CccccCccCCeEEECCCcc
Confidence            9999999999996 5567899999996555443

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.96  E-value=1.1e-29  Score=208.43  Aligned_cols=176  Identities=21%  Similarity=0.145  Sum_probs=129.1

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+|..+.+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++             +.++.++++|+++.+
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~   87 (272)
T 4dyv_A           21 QSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-------------GDDALCVPTDVTDPD   87 (272)
T ss_dssp             -------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------------TSCCEEEECCTTSHH
T ss_pred             hhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------------CCCeEEEEecCCCHH
Confidence            3456678999999999999999999999999999999999999888877665             246789999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh-----------------hh---------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL-----------------SN---------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l-----------------~~---------------------------------  116 (222)
                      +++++++.+.+.++++|+||||||+...                 +|                                 
T Consensus        88 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  167 (272)
T 4dyv_A           88 SVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA  167 (272)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSST
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhh
Confidence            9999999999999999999999997420                 00                                 


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                      +..|+++++.|++++||+||+|+||+++|+|.......... .. ...+..+  +.+|+|+|+.
T Consensus       168 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~-~~~~~~~--~~~pedvA~~  243 (272)
T 4dyv_A          168 TSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQ-AD-LSIKVEP--VMDVAHVASA  243 (272)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----------------------------CHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchh-hh-hcccccC--CCCHHHHHHH
Confidence                            79999999999999999999999999999998765432111 11 2234445  7899999999


Q ss_pred             HHHHhcCCCcccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~  199 (222)
                      ++||++.+....+++..+.
T Consensus       244 v~fL~s~~~~~~~~~i~i~  262 (272)
T 4dyv_A          244 VVYMASLPLDANVQFMTIM  262 (272)
T ss_dssp             HHHHHHSCTTSCCCEEEEE
T ss_pred             HHHHhCCCCcCccceEEEe
Confidence            9999988766666655543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.96  E-value=1.2e-29  Score=212.64  Aligned_cols=181  Identities=19%  Similarity=0.192  Sum_probs=143.6

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC------------hhHHHHHHHHHHHhhhhhcccCCCCCeE
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD------------VEKAETTASEIRKHFEVATSEDKKPGEV   75 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~   75 (222)
                      .|..+++|++|||||++|||+++|+.|++.|++|++++|+            .+.++++.+.+...          +.++
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  109 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ----------GRRI  109 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT----------TCCE
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc----------CCeE
Confidence            3567899999999999999999999999999999999886            66777777776653          6689


Q ss_pred             EEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH----------------hhh-----------------------
Q psy7936          76 LIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI----------------LSN-----------------------  116 (222)
Q Consensus        76 ~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-----------------------  116 (222)
                      .++++|+++.++++++++++.+.++++|+||||||+..                -+|                       
T Consensus       110 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~  189 (317)
T 3oec_A          110 IARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGS  189 (317)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEE
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCE
Confidence            99999999999999999999999999999999999754                000                       


Q ss_pred             -------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC------C---CCCcchhh-
Q psy7936         117 -------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD------D---TYFPGART-  161 (222)
Q Consensus       117 -------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~------~---~~~~~~~~-  161 (222)
                                               +..|+++++.|++++||+||+|+||+++|+|.....      +   ........ 
T Consensus       190 Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (317)
T 3oec_A          190 VIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAE  269 (317)
T ss_dssp             EEEECCGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHH
T ss_pred             EEEECcHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHH
Confidence                                     789999999999999999999999999999864210      0   00000000 


Q ss_pred             -----hHHHHHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         162 -----LGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       162 -----~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                           ...| .+  +.+|+|+|+.++||+ ++...++||+.|..++
T Consensus       270 ~~~~~~~~p-~~--~~~pedvA~av~fL~-s~~a~~itG~~i~vdG  311 (317)
T 3oec_A          270 LFSQLTLLP-IP--WVEPEDVSNAVAWLA-SDEARYIHGAAIPVDG  311 (317)
T ss_dssp             HHTTTCSSS-SS--SBCHHHHHHHHHHHT-SGGGTTCCSCEEEEST
T ss_pred             HHhhhccCC-CC--CCCHHHHHHHHHHHc-CCcccCCCCCEEEECc
Confidence                 0001 12  569999999999996 5567899999995443

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.96  E-value=8.7e-30  Score=209.76  Aligned_cols=184  Identities=14%  Similarity=0.068  Sum_probs=144.3

Q ss_pred             CCCCCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           7 VSASRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      .+|..+++|++|||||+  +|||+++|+.|+++|++|++++|+.  ..+..+.+...          ..++.++.||+++
T Consensus        19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~----------~~~~~~~~~Dl~~   86 (280)
T 3nrc_A           19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE----------FNPAAVLPCDVIS   86 (280)
T ss_dssp             ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGG----------GCCSEEEECCTTC
T ss_pred             CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHh----------cCCceEEEeecCC
Confidence            44667899999999998  8899999999999999999999988  33444445443          2357899999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHHh----------h-----------h---------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCIL----------S-----------N---------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~l----------~-----------~---------------------------  116 (222)
                      .++++++++++.+.++++|++|||||+...          .           |                           
T Consensus        87 ~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS  166 (280)
T 3nrc_A           87 DQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTY  166 (280)
T ss_dssp             HHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            999999999999999999999999997421          0           0                           


Q ss_pred             -------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHH
Q psy7936         117 -------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 -------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e  176 (222)
                                         +..|++.++.|++++||+||+|+||+++|+|....... ..........|+++  ..+|+|
T Consensus       167 ~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~--~~~ped  244 (280)
T 3nrc_A          167 IGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKK--NVDIME  244 (280)
T ss_dssp             GGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCS--CCCHHH
T ss_pred             cccccCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCC--CCCHHH
Confidence                               78999999999999999999999999999998765431 11111112233444  689999


Q ss_pred             HHHHHHHHhcCCCcccccccccccccccc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      +|+.++||+ ++...++||+.|..++...
T Consensus       245 vA~~v~~l~-s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          245 VGNTVAFLC-SDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             HHHHHHHTT-SGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHh-CcccCCcCCcEEEECCCcc
Confidence            999999996 4567899999995554443

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=1.9e-29  Score=206.17  Aligned_cols=176  Identities=20%  Similarity=0.215  Sum_probs=141.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+|++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+++             ..++.++++|+++.++++
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~v~   68 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-------------EAEAIAVVADVSDPKAVE   68 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-------------CSSEEEEECCTTSHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------cCceEEEEcCCCCHHHHH
Confidence            3478999999999999999999999999999999999998776655433             246889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+...                +|                                     
T Consensus        69 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  148 (263)
T 2a4k_A           69 AVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAH  148 (263)
T ss_dssp             HHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHH
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCCCcHH
Confidence            9999999999999999999997530                00                                     


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                             +..+++.++.+++++||+||+|+||+++|+|.....+ ..........|+++  +.+|+|+|+.++|+++ +.
T Consensus       149 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~p~~~--~~~p~dvA~~v~~l~s-~~  224 (263)
T 2a4k_A          149 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP-WAWEQEVGASPLGR--AGRPEEVAQAALFLLS-EE  224 (263)
T ss_dssp             HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH-HHHHHHHHTSTTCS--CBCHHHHHHHHHHHHS-GG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCH-HHHHHHHhcCCCCC--CcCHHHHHHHHHHHhC-cc
Confidence                   6779999999999999999999999999999765421 11111111123334  6899999999999974 45


Q ss_pred             ccccccccccccc
Q psy7936         190 AAKETGLYYSDYK  202 (222)
Q Consensus       190 ~~~~~G~~i~~~~  202 (222)
                      ..+++|+.+..++
T Consensus       225 ~~~~tG~~i~vdg  237 (263)
T 2a4k_A          225 SAYITGQALYVDG  237 (263)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             ccCCcCCEEEECC
Confidence            7899999994443

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.96  E-value=3.3e-29  Score=204.90  Aligned_cols=172  Identities=26%  Similarity=0.269  Sum_probs=132.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |.+|++|||||++|||+++|+.|++.|++|++++|+.+.++++.++++..          +.++.++.+|+++.++++++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dv~d~~~v~~~   71 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA----------GGTALAQVLDVTDRHSVAAF   71 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT----------TCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHHHHH
Confidence            46899999999999999999999999999999999999999998888763          66899999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh----------------hh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL----------------SN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------------  116 (222)
                      ++.+.+.++++|+||||||+...                +|                                       
T Consensus        72 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~  151 (264)
T 3tfo_A           72 AQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAA  151 (264)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCCh
Confidence            99999999999999999997540                00                                       


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                              +..|+++++.++ + ||+||+|+||+++|+|............   ..... ....+|+|+|+.++||++.+
T Consensus       152 ~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~---~~~~~-~~~~~pedvA~~v~~l~s~~  225 (264)
T 3tfo_A          152 VYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAA---MDTYR-AIALQPADIARAVRQVIEAP  225 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC---------------------------CCCHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHH---HHhhh-ccCCCHHHHHHHHHHHhcCC
Confidence                    789999999998 4 9999999999999999876543211111   01111 11579999999999998665


Q ss_pred             Cccccccccccc
Q psy7936         189 GAAKETGLYYSD  200 (222)
Q Consensus       189 ~~~~~~G~~i~~  200 (222)
                       ..+.+|+.+..
T Consensus       226 -~~~~~~~i~i~  236 (264)
T 3tfo_A          226 -QSVDTTEITIR  236 (264)
T ss_dssp             -TTEEEEEEEEE
T ss_pred             -ccCccceEEEe
Confidence             56778877733

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.8e-29  Score=205.15  Aligned_cols=174  Identities=19%  Similarity=0.153  Sum_probs=138.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +|++|||||++|||+++|++|+++|  +.|++++|+.+.++++.+.+             +.++.++++|+++.++++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~   68 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-------------GDRFFYVVGDITEDSVLKQL   68 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-------------GGGEEEEESCTTSHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-------------CCceEEEECCCCCHHHHHHH
Confidence            6899999999999999999999985  69999999999888776654             34788999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH-----------------hhh--------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI-----------------LSN--------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~-----------------l~~--------------------------------------  116 (222)
                      ++++.+.++++|+||||||+..                 -+|                                      
T Consensus        69 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~  148 (254)
T 3kzv_A           69 VNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWG  148 (254)
T ss_dssp             HHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSH
T ss_pred             HHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcc
Confidence            9999999999999999999742                 000                                      


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC--------cchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF--------PGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                              +..++++++.|+  +||+||+|+||+++|+|.........        ........|+++  ..+|+|+|+.
T Consensus       149 ~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~p~dva~~  224 (254)
T 3kzv_A          149 AYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQ--LLDSSVPATV  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC------CHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCC--cCCcccHHHH
Confidence                    889999999998  68999999999999999876543211        111112344555  7899999999


Q ss_pred             HHHHhcCCCccccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~~~  204 (222)
                      ++||++++.+.++||++|..++..
T Consensus       225 v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          225 YAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             HHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             HHHHHhhcccCCCCccEEEecCcc
Confidence            999986543589999999655543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.96  E-value=7.5e-30  Score=208.89  Aligned_cols=182  Identities=19%  Similarity=0.176  Sum_probs=146.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..++++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+...         .+.++.++++|+++.+++
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~Dl~~~~~v   86 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK---------YGVETMAFRCDVSNYEEV   86 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------HCCCEEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---------cCCeEEEEEcCCCCHHHH
Confidence            46689999999999999999999999999999999999999888888777333         145788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      +++++.+.+.++++|+||||||+..                -+|                                    
T Consensus        87 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~  166 (267)
T 1vl8_A           87 KKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM  166 (267)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCC
Confidence            9999999999999999999999643                000                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..+++.++.+++++||+||+|+||+++|+|....... ..........|+++  +.+|+|+|+.++|
T Consensus       167 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~--~~~p~dvA~~v~~  244 (267)
T 1vl8_A          167 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGR--TGVPEDLKGVAVF  244 (267)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSS--CBCGGGGHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCC--CcCHHHHHHHHHH
Confidence                        78899999999999999999999999999987543211 01011101123334  6899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |++ +...+++|+.+..++
T Consensus       245 l~s-~~~~~itG~~i~vdG  262 (267)
T 1vl8_A          245 LAS-EEAKYVTGQIIFVDG  262 (267)
T ss_dssp             HHS-GGGTTCCSCEEEEST
T ss_pred             HcC-ccccCCcCCeEEECC
Confidence            974 456899999995443

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.96  E-value=5.8e-30  Score=211.76  Aligned_cols=182  Identities=24%  Similarity=0.250  Sum_probs=146.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC---EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA---KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+|++|++|||||++|||+++|+.|++.|+   +|++++|+.+.++++.+.+....        ++.++.+++||+++.+
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~Dv~d~~  100 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF--------PNAKVHVAQLDITQAE  100 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC--------TTCEEEEEECCTTCGG
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC--------CCCeEEEEECCCCCHH
Confidence            457899999999999999999999999988   99999999999999998887653        4678999999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH-----------------hhh---------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI-----------------LSN---------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~---------------------------------  116 (222)
                      +++++++++.+.++++|+||||||+..                 -+|                                 
T Consensus       101 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~  180 (287)
T 3rku_A          101 KIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD  180 (287)
T ss_dssp             GHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC
Confidence            999999999999999999999999642                 000                                 


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                    +..|+++++.|++++||+||+|+||+++|+|......... ..  .........+.+|+|+|+.++
T Consensus       181 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~-~~--~~~~~~~~~p~~pedvA~~v~  257 (287)
T 3rku_A          181 AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNE-EQ--AKNVYKDTTPLMADDVADLIV  257 (287)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCH-HH--HHHHHTTSCCEEHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcH-HH--HHHhhcccCCCCHHHHHHHHH
Confidence                          7999999999999999999999999999998643221100 00  111111112458999999999


Q ss_pred             HHhcCCCcccccccccc-cccc
Q psy7936         183 HCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      ||+++ ...+++|+.+. +++.
T Consensus       258 ~l~s~-~~~~i~g~~i~v~~g~  278 (287)
T 3rku_A          258 YATSR-KQNTVIADTLIFPTNQ  278 (287)
T ss_dssp             HHHTS-CTTEEEEEEEEEETTE
T ss_pred             HHhCC-CCCeEecceEEeeCCC
Confidence            99755 56799999984 4443

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.96  E-value=1.9e-29  Score=205.51  Aligned_cols=180  Identities=22%  Similarity=0.154  Sum_probs=142.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+++....        ++.++.++.+|+++.+++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~v~~   75 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV--------SGAQVDIVAGDIREPGDIDR   75 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS--------TTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--------CCCeEEEEEccCCCHHHHHH
Confidence            4789999999999999999999999999999999999998888887776421        13378899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+.++ +|++|||||+...                +|                                      
T Consensus        76 ~~~~~~~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  154 (260)
T 2z1n_A           76 LFEKARDLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDL  154 (260)
T ss_dssp             HHHHHHHTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB
T ss_pred             HHHHHHHhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC
Confidence            9999999988 9999999996420                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCC----------CCCCCCcchhhhHHHHHHHhcCChHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRY----------MDDTYFPGARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~p~e~  177 (222)
                               +..+++.++.+++++||+||+|+||+++|+|...          ..............|+++  +.+|+|+
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~~~dv  232 (260)
T 2z1n_A          155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGR--VGKPEEL  232 (260)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSS--CCCHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCC--ccCHHHH
Confidence                     7889999999999999999999999999999762          111100111111124444  6799999


Q ss_pred             HHHHHHHhcCCCccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+.++||+ ++...+++|+.+..++
T Consensus       233 a~~v~~l~-s~~~~~~tG~~i~vdG  256 (260)
T 2z1n_A          233 ASVVAFLA-SEKASFITGAVIPVDG  256 (260)
T ss_dssp             HHHHHHHT-SGGGTTCCSCEEEEST
T ss_pred             HHHHHHHh-CccccCCCCCEEEeCC
Confidence            99999996 4456899999995443

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.96  E-value=2.5e-29  Score=206.44  Aligned_cols=190  Identities=13%  Similarity=0.097  Sum_probs=145.1

Q ss_pred             CCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          11 RLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        11 ~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .|++|++|||||+  +|||+++++.|+++|++|++++|+.+ .++..+.+....          +.+.++++|+++.+++
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~----------~~~~~~~~D~~~~~~v   71 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL----------NSPYVYELDVSKEEHF   71 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT----------TCCCEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc----------CCcEEEEcCCCCHHHH
Confidence            4689999999999  99999999999999999999999986 444555554431          2367899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh--------------------hh--------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL--------------------SN--------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l--------------------~~--------------------------------  116 (222)
                      +++++.+.+.++++|+||||||+...                    +|                                
T Consensus        72 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~  151 (275)
T 2pd4_A           72 KSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY  151 (275)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC
Confidence            99999999999999999999986410                    00                                


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                   +..+++.++.+++++||+||+|+||+++|+|....... ..........|+++  ..+|+|+|+.++
T Consensus       152 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~--~~~p~dva~~~~  229 (275)
T 2pd4_A          152 MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRK--NVSLEEVGNAGM  229 (275)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSS--CCCHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCC--CCCHHHHHHHHH
Confidence                         78899999999999999999999999999997654211 00011111123333  679999999999


Q ss_pred             HHhcCCCcccccccccc-cccccc--cCCCccccc
Q psy7936         183 HCALDEGAAKETGLYYS-DYKVAK--SRNFPFELK  214 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~-~~~~~~--~~~~~~~~~  214 (222)
                      |+++ +...+++|+++. +++...  +++...+.+
T Consensus       230 ~l~s-~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~  263 (275)
T 2pd4_A          230 YLLS-SLSSGVSGEVHFVDAGYHVMGMGAVEEKDN  263 (275)
T ss_dssp             HHHS-GGGTTCCSCEEEESTTGGGBSSCCCTTCTT
T ss_pred             HHhC-ccccCCCCCEEEECCCcccCCCChhhcCcc
Confidence            9974 456899999994 444332  344444443

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=1.1e-29  Score=205.29  Aligned_cols=174  Identities=17%  Similarity=0.143  Sum_probs=139.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+             +  +.++++|+++.+++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~--~~~~~~D~~~~~~~~~   66 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------------G--AHPVVMDVADPASVER   66 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------------T--CEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------------C--CEEEEecCCCHHHHHH
Confidence            467899999999999999999999999999999999988776554321             2  6788999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||+..                -+|                                      
T Consensus        67 ~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  146 (245)
T 1uls_A           67 GFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQA  146 (245)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCCCch
Confidence            99999999999999999999642                000                                      


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                              +..++++++.|++++||+||+|+||+++|+|....... .........|+++  +.+|+|+|+.++||++ +
T Consensus       147 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~p~~~--~~~~~dvA~~v~~l~s-~  222 (245)
T 1uls_A          147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEK-VREKAIAATPLGR--AGKPLEVAYAALFLLS-D  222 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHH-HHHHHHHTCTTCS--CBCHHHHHHHHHHHHS-G
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHH-HHHHHHhhCCCCC--CcCHHHHHHHHHHHhC-c
Confidence                    78899999999999999999999999999997654211 1111101123334  6799999999999975 4


Q ss_pred             Ccccccccccccccc
Q psy7936         189 GAAKETGLYYSDYKV  203 (222)
Q Consensus       189 ~~~~~~G~~i~~~~~  203 (222)
                      ...+++|+.+..++.
T Consensus       223 ~~~~~tG~~~~vdgG  237 (245)
T 1uls_A          223 ESSFITGQVLFVDGG  237 (245)
T ss_dssp             GGTTCCSCEEEESTT
T ss_pred             hhcCCcCCEEEECCC
Confidence            567999999954444

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.96  E-value=1.9e-29  Score=213.77  Aligned_cols=173  Identities=22%  Similarity=0.237  Sum_probs=144.6

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-------HHHHHHHHHHhhhhhcccCCCCCeEEEEec
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-------AETTASEIRKHFEVATSEDKKPGEVLIKKL   80 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (222)
                      ++.+|+||++|||||++|||+++|++|++.|++|++++|+.+.       +++..+.++..          +.++.++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~----------g~~~~~~~~  108 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV----------GGKALPCIV  108 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT----------TCEEEEEEC
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc----------CCeEEEEEc
Confidence            4467899999999999999999999999999999999998764       55666666653          678999999


Q ss_pred             CCCChhhHHHHHHHHHhhccceeEEEechhhHH----------------hhh----------------------------
Q psy7936          81 DLASFKSIRDCAQDINQTEANVHILINNAVYCI----------------LSN----------------------------  116 (222)
Q Consensus        81 D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~----------------------------  116 (222)
                      |+++.++++++++++.+.++++|+||||||+..                -+|                            
T Consensus       109 Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS  188 (346)
T 3kvo_A          109 DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISP  188 (346)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECC
Confidence            999999999999999999999999999999743                000                            


Q ss_pred             ---------------------HHHHHHHHHhhcCCCCeEEEEEeCCc-ccCCcCCCCCCCCCcchhhhHHHHHHHhcCCh
Q psy7936         117 ---------------------NILFYSILFYAIPGKNVNVYAVHPGI-VKTELGRYMDDTYFPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 ---------------------~~~~~~~la~~~~~~gI~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  174 (222)
                                           +..+++.++.|++ +||+||+|+||+ ++|++.......         .+.++  ..+|
T Consensus       189 ~~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~~---------~~~~r--~~~p  256 (346)
T 3kvo_A          189 PLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGP---------GIESQ--CRKV  256 (346)
T ss_dssp             CCCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC-----------CGGG--CBCT
T ss_pred             HHHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhccc---------ccccc--CCCH
Confidence                                 7889999999999 899999999995 999887643321         12333  7899


Q ss_pred             HHHHHHHHHHhcCCCccccccccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~  204 (222)
                      +|+|+.++||+++  ..++||+++.+++..
T Consensus       257 edvA~~v~~L~s~--~~~itG~~ivdgg~~  284 (346)
T 3kvo_A          257 DIIADAAYSIFQK--PKSFTGNFVIDENIL  284 (346)
T ss_dssp             HHHHHHHHHHHTS--CTTCCSCEEEHHHHH
T ss_pred             HHHHHHHHHHHhc--CCCCCceEEECCcEe
Confidence            9999999999754  689999999666643

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.96  E-value=1.3e-29  Score=206.09  Aligned_cols=171  Identities=13%  Similarity=0.142  Sum_probs=130.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+...   +.             .+.++.++++|+++.++++
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~-------------~~~~~~~~~~D~~~~~~v~   68 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---AD-------------LGDRARFAAADVTDEAAVA   68 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HH-------------TCTTEEEEECCTTCHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hh-------------cCCceEEEECCCCCHHHHH
Confidence            4678999999999999999999999999999999999665332   11             1457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-------------------------------------h-h--------h-------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-------------------------------------L-S--------N-------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-------------------------------------l-~--------~-------  116 (222)
                      ++++.+.+ ++++|++|||||+..                                     + .        .       
T Consensus        69 ~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  147 (257)
T 3tl3_A           69 SALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIIN  147 (257)
T ss_dssp             HHHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEE
T ss_pred             HHHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEE
Confidence            99998877 899999999999632                                     0 0        0       


Q ss_pred             ----------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHH-HHHhcCC
Q psy7936         117 ----------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVL-MWWWMKT  173 (222)
Q Consensus       117 ----------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  173 (222)
                                            +..|++.++.|++++||+||+|+||+++|+|.....+. .........+. ++  ..+
T Consensus       148 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~r--~~~  224 (257)
T 3tl3_A          148 TASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEE-ARASLGKQVPHPSR--LGN  224 (257)
T ss_dssp             ECCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHH-HHHHHHHTSSSSCS--CBC
T ss_pred             EcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHH-HHHHHHhcCCCCCC--ccC
Confidence                                  78899999999999999999999999999998765421 11111011222 33  679


Q ss_pred             hHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         174 PEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       174 p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+|+|+.++||+++   .++||+.|..++.
T Consensus       225 p~dva~~v~~l~s~---~~itG~~i~vdGG  251 (257)
T 3tl3_A          225 PDEYGALAVHIIEN---PMLNGEVIRLDGA  251 (257)
T ss_dssp             HHHHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhcC---CCCCCCEEEECCC
Confidence            99999999999854   6999999954443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.96  E-value=2.3e-29  Score=205.54  Aligned_cols=183  Identities=17%  Similarity=0.054  Sum_probs=138.5

Q ss_pred             CCCCCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           7 VSASRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      ....++++|++|||||+  +|||+++|+.|+++|++|++++|+....+.+ +.+...          ..++.+++||+++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~----------~~~~~~~~~Dv~~   75 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRI-TEFAAE----------FGSELVFPCDVAD   75 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHH----------TTCCCEEECCTTC
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHH-HHHHHH----------cCCcEEEECCCCC
Confidence            34567899999999999  9999999999999999999999996544333 334332          2357899999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHHh---------------------hh---------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCIL---------------------SN---------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~l---------------------~~---------------------------  116 (222)
                      .++++++++.+.+.++++|++|||||+...                     +|                           
T Consensus        76 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  155 (271)
T 3ek2_A           76 DAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYL  155 (271)
T ss_dssp             HHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecc
Confidence            999999999999999999999999997421                     00                           


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHH
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~  177 (222)
                                        +..|+++++.+++++||+||+|+||+++|+|....... ..........|+++  +.+|+|+
T Consensus       156 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~pedv  233 (271)
T 3ek2_A          156 GAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKR--NVTIEQV  233 (271)
T ss_dssp             GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSS--CCCHHHH
T ss_pred             ccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCC--CCCHHHH
Confidence                              78999999999999999999999999999998765321 11111112233444  6899999


Q ss_pred             HHHHHHHhcCCCcccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+.++||++ +...++||+.|..++.
T Consensus       234 a~~i~~l~s-~~~~~~tG~~i~vdgG  258 (271)
T 3ek2_A          234 GNAGAFLLS-DLASGVTAEVMHVDSG  258 (271)
T ss_dssp             HHHHHHHHS-GGGTTCCSEEEEESTT
T ss_pred             HHHHHHHcC-cccCCeeeeEEEECCC
Confidence            999999974 4578999999954433

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.96  E-value=4.2e-30  Score=209.90  Aligned_cols=181  Identities=18%  Similarity=0.169  Sum_probs=146.8

Q ss_pred             CCCCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHH-HHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           8 SASRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKA-ETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      +++++++|++|||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++....         +.++.++++|+++
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~Dl~~   84 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY---------GIKAKAYKCQVDS   84 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH---------CCCEECCBCCTTC
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc---------CCceeEEecCCCC
Confidence            3467899999999999  9999999999999999999999886544 66666666542         6689999999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------  116 (222)
                      .++++++++++.+.++++|+||||||+...                +|                                
T Consensus        85 ~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  164 (267)
T 3gdg_A           85 YESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGH  164 (267)
T ss_dssp             HHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccc
Confidence            999999999999999999999999997540                00                                


Q ss_pred             -----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 -----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 -----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                       +..+++.++.++++. |+||+|+||+++|+|.....+. .........|+++  ..+|+|+|+
T Consensus       165 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~r--~~~~~dva~  240 (267)
T 3gdg_A          165 IANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKE-TQQLWHSMIPMGR--DGLAKELKG  240 (267)
T ss_dssp             SCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHH-HHHHHHTTSTTSS--CEETHHHHH
T ss_pred             ccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHH-HHHHHHhcCCCCC--CcCHHHHHh
Confidence                             789999999999887 9999999999999998765321 1111112234444  678999999


Q ss_pred             HHHHHhcCCCccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .++||+ ++...++||+.|..++
T Consensus       241 ~~~~l~-s~~~~~itG~~i~vdg  262 (267)
T 3gdg_A          241 AYVYFA-SDASTYTTGADLLIDG  262 (267)
T ss_dssp             HHHHHH-STTCTTCCSCEEEEST
T ss_pred             Hhheee-cCccccccCCEEEECC
Confidence            999996 5567899999995444

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.96  E-value=5.2e-29  Score=209.08  Aligned_cols=178  Identities=20%  Similarity=0.220  Sum_probs=146.0

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC----------hhHHHHHHHHHHHhhhhhcccCCCCCeEEE
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD----------VEKAETTASEIRKHFEVATSEDKKPGEVLI   77 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~----------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   77 (222)
                      +|..+++|++|||||++|||+++|+.|+++|++|++++|+          .+.++++.+++...          +.++.+
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~   90 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA----------GGEAVA   90 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT----------TCEEEE
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc----------CCcEEE
Confidence            3566899999999999999999999999999999999998          67788888888763          568999


Q ss_pred             EecCCCChhhHHHHHHHHHhhccceeEEEechhhHH---------------------------------hh---------
Q psy7936          78 KKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI---------------------------------LS---------  115 (222)
Q Consensus        78 ~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~---------------------------------l~---------  115 (222)
                      +++|+++.++++++++.+.+.++++|+||||||+..                                 +.         
T Consensus        91 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~  170 (322)
T 3qlj_A           91 DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAV  170 (322)
T ss_dssp             ECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCC
Confidence            999999999999999999999999999999999753                                 00         


Q ss_pred             --h-------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHH
Q psy7936         116 --N-------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMW  168 (222)
Q Consensus       116 --~-------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  168 (222)
                        .                         +..|+++++.|++++||+||+|+|| ++|+|.........      ..+..+
T Consensus       171 ~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~------~~~~~~  243 (322)
T 3qlj_A          171 DGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM------ATQDQD  243 (322)
T ss_dssp             CEEEEEECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------------
T ss_pred             CcEEEEEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh------hccccc
Confidence              0                         7899999999999999999999999 99999876543211      111222


Q ss_pred             HhcCChHHHHHHHHHHhcCCCcccccccccc-cccc
Q psy7936         169 WWMKTPEQGAQTTLHCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       169 ~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      ....+|+|+|+.++||+ ++...++||++|. +++.
T Consensus       244 ~~~~~pedva~~v~~L~-s~~~~~itG~~i~vdGG~  278 (322)
T 3qlj_A          244 FDAMAPENVSPLVVWLG-SAEARDVTGKVFEVEGGK  278 (322)
T ss_dssp             CCTTCGGGTHHHHHHHT-SGGGGGCCSCEEEEETTE
T ss_pred             cCCCCHHHHHHHHHHHh-CccccCCCCCEEEECCCc
Confidence            12569999999999996 5567899999994 4443

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.96  E-value=3.7e-29  Score=206.43  Aligned_cols=196  Identities=21%  Similarity=0.169  Sum_probs=143.2

Q ss_pred             CCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          11 RLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        11 ~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .|++|++|||||+  +|||+++++.|+++|++|++++|+.+ .++..+.+....         + .+.++++|+++.+++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~---------~-~~~~~~~Dl~~~~~v   86 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGF---------G-SDLVVKCDVSLDEDI   86 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT---------T-CCCEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhc---------C-CeEEEEcCCCCHHHH
Confidence            4889999999999  99999999999999999999999985 444455554431         2 367899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh--------------------hh--------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL--------------------SN--------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l--------------------~~--------------------------------  116 (222)
                      +++++.+.+.++++|+||||||+...                    +|                                
T Consensus        87 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~  166 (285)
T 2p91_A           87 KNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK  166 (285)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc
Confidence            99999999999999999999986410                    00                                


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                    +..+++.++.+++++||+||+|+||+++|+|....... ..........|+++  ..+|+|+|+.+
T Consensus       167 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~dva~~~  244 (285)
T 2p91_A          167 VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGK--PITIEDVGDTA  244 (285)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSS--CCCHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCC--CcCHHHHHHHH
Confidence                          78899999999999999999999999999987653211 00011111123333  67999999999


Q ss_pred             HHHhcCCCccccccccc-ccccccccCCCcccccCCCCCCC
Q psy7936         182 LHCALDEGAAKETGLYY-SDYKVAKSRNFPFELKGKGKSTF  221 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i-~~~~~~~~~~~~~~~~~~~~~~~  221 (222)
                      +|++ ++...+++|+.+ .+++....+.+..+.+.+ +.+|
T Consensus       245 ~~l~-s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~-~~lw  283 (285)
T 2p91_A          245 VFLC-SDWARAITGEVVHVDNGYHIMGVFGREEEIK-KEVY  283 (285)
T ss_dssp             HHHT-SGGGTTCCSCEEEESTTGGGBSCC------------
T ss_pred             HHHc-CCcccCCCCCEEEECCCcccccccCChHHHH-HHhc
Confidence            9996 455779999988 556655566665555433 3444

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.96  E-value=3.5e-29  Score=202.75  Aligned_cols=174  Identities=25%  Similarity=0.239  Sum_probs=133.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +|++|++|||||++|||+++++.|+++|++|++++|+. +.+++   .++.          .+.++.++++|+++.++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~----------~~~~~~~~~~Dv~~~~~v~   70 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRN----------LGRRVLTVKCDVSQPGDVE   70 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHH----------TTCCEEEEECCTTCHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHh----------cCCcEEEEEeecCCHHHHH
Confidence            47899999999999999999999999999999999998 66654   3332          2457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----------------hhh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----------------LSN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----------------l~~-------------------------------------  116 (222)
                      ++++.+.+.++++|+||||||+..                -+|                                     
T Consensus        71 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  150 (249)
T 2ew8_A           71 AFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA  150 (249)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC
Confidence            999999999999999999999642                000                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCC-CCCCC--CCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGR-YMDDT--YFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                +..+++.++.|++++||+||+|+||+++|+|.. .....  ...... . .|+++  +.+|+|+|+.++|
T Consensus       151 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~-~~~~~--~~~p~dva~~~~~  226 (249)
T 2ew8_A          151 YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNM-L-QAIPR--LQVPLDLTGAAAF  226 (249)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CT-T-SSSCS--CCCTHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHh-h-CccCC--CCCHHHHHHHHHH
Confidence                      789999999999999999999999999999976 33211  111111 1 23344  6899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+ ++...+++|+.+..++
T Consensus       227 l~-s~~~~~~tG~~~~vdG  244 (249)
T 2ew8_A          227 LA-SDDASFITGQTLAVDG  244 (249)
T ss_dssp             HT-SGGGTTCCSCEEEESS
T ss_pred             Hc-CcccCCCCCcEEEECC
Confidence            96 4557899999995443

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.96  E-value=2.7e-29  Score=205.32  Aligned_cols=178  Identities=19%  Similarity=0.148  Sum_probs=143.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEE-EeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIM-ACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++.+|++|||||++|||+++|++|+++|++|++ ..|+.+..++..+.+...          +.++.++.+|+++.+++
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~~~~~~   91 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN----------GGNGRLLSFDVANREQC   91 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----------CCceEEEEecCCCHHHH
Confidence            5578899999999999999999999999999866 457788888888888763          56889999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      +++++.+.+.++++|++|||||+..                -+|                                    
T Consensus        92 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  171 (267)
T 4iiu_A           92 REVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN  171 (267)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC
Confidence            9999999999999999999998753                000                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..+++.++.+++++||+||+|+||+++|+|.....  ..........|+++  +.+|+|+|+.+.||
T Consensus       172 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~p~~~--~~~~edva~~~~~L  247 (267)
T 4iiu_A          172 RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEE--SALKEAMSMIPMKR--MGQAEEVAGLASYL  247 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCH--HHHHHHHHTCTTCS--CBCHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccH--HHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                        788999999999999999999999999999986542  11111112233444  67999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      + ++...++||+.|..++
T Consensus       248 ~-s~~~~~itG~~i~vdG  264 (267)
T 4iiu_A          248 M-SDIAGYVTRQVISING  264 (267)
T ss_dssp             H-SGGGTTCCSCEEEEST
T ss_pred             h-CCcccCccCCEEEeCC
Confidence            6 5567899999995443

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.96  E-value=1.4e-29  Score=205.68  Aligned_cols=176  Identities=22%  Similarity=0.177  Sum_probs=141.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+++             +.++.++.+|+++.+++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~   68 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-------------GDAARYQHLDVTIEEDWQR   68 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------------GGGEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------CCceeEEEecCCCHHHHHH
Confidence            468999999999999999999999999999999999998777665443             2367889999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++++.+.++++|++|||||+...                +|                                      
T Consensus        69 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  148 (254)
T 1hdc_A           69 VVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT  148 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCc
Confidence            999999999999999999986420                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcC-ChHHHHHHHHHHhc
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMK-TPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~e~a~~i~~l~~  186 (222)
                               +..+++.++.+++++||+||+|+||+++|+|....... .........|+++  +. +|+|+|+.+++|++
T Consensus       149 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~p~~~--~~~~~~dvA~~v~~l~s  225 (254)
T 1hdc_A          149 SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR-QGEGNYPNTPMGR--VGNEPGEIAGAVVKLLS  225 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC-CSTTSCTTSTTSS--CB-CHHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh-HHHHHHhcCCCCC--CCCCHHHHHHHHHHHhC
Confidence                     78899999999999999999999999999986543211 1111111223444  67 99999999999974


Q ss_pred             CCCcccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYKV  203 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~~  203 (222)
                       +...+++|+.+..++.
T Consensus       226 -~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          226 -DTSSYVTGAELAVDGG  241 (254)
T ss_dssp             -GGGTTCCSCEEEESTT
T ss_pred             -chhcCCCCCEEEECCC
Confidence             4567999999954443

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.96  E-value=4.4e-29  Score=202.33  Aligned_cols=178  Identities=25%  Similarity=0.246  Sum_probs=145.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +++|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++...          +.++.++.+|+++.+++++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~   74 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN----------GGSAFSIGANLESLHGVEA   74 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT----------TCEEEEEECCTTSHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc----------CCceEEEecCcCCHHHHHH
Confidence            679999999999999999999999999999885 67788888888888763          6689999999999999999


Q ss_pred             HHHHHHhhcc------ceeEEEechhhHH----------------hhh--------------------------------
Q psy7936          91 CAQDINQTEA------NVHILINNAVYCI----------------LSN--------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~------~id~li~~ag~~~----------------l~~--------------------------------  116 (222)
                      +++.+.+.++      ++|++|||||+..                -+|                                
T Consensus        75 ~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~  154 (255)
T 3icc_A           75 LYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS  154 (255)
T ss_dssp             HHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC
T ss_pred             HHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC
Confidence            9999877764      4999999999754                001                                


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcc-hhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPG-ARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                   +..++++++.+++++||+||+|+||+++|+|........... ......++.+  ..+|+|+|+.+.
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~  232 (255)
T 3icc_A          155 LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNR--LGEVEDIADTAA  232 (255)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSS--CBCHHHHHHHHH
T ss_pred             CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCC--CCCHHHHHHHHH
Confidence                         789999999999999999999999999999988765432111 1112223334  679999999999


Q ss_pred             HHhcCCCccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ||+ ++...+++|+.|..++
T Consensus       233 ~l~-s~~~~~~tG~~i~vdg  251 (255)
T 3icc_A          233 FLA-SPDSRWVTGQLIDVSG  251 (255)
T ss_dssp             HHH-SGGGTTCCSCEEEESS
T ss_pred             HHh-CcccCCccCCEEEecC
Confidence            996 5567899999995444

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=1.2e-29  Score=208.96  Aligned_cols=183  Identities=24%  Similarity=0.184  Sum_probs=145.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCC---eEEEEecCCCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG---EVLIKKLDLASFK   86 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~D~~~~~   86 (222)
                      .+|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+...          +.   ++.++.+|+++.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~~~Dv~~~~   71 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS----------GVSEKQVNSVVADVTTED   71 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------TCCGGGEEEEECCTTSHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc----------CCCCcceEEEEecCCCHH
Confidence            3578999999999999999999999999999999999999888888777653          23   7889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH--------------------hhh------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI--------------------LSN------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~--------------------l~~------------------------------  116 (222)
                      +++++++.+.+.++++|+||||||+..                    -+|                              
T Consensus        72 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~  151 (280)
T 1xkq_A           72 GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVA  151 (280)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGG
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccc
Confidence            999999999999999999999998531                    000                              


Q ss_pred             -----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC--------CcchhhhHHHHHHHhc
Q psy7936         117 -----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY--------FPGARTLGRVLMWWWM  171 (222)
Q Consensus       117 -----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~~~~~~~  171 (222)
                                       +..++++++.|++++||+||+|+||+++|+|........        .........|+++  .
T Consensus       152 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~  229 (280)
T 1xkq_A          152 GPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGA--A  229 (280)
T ss_dssp             SSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSS--C
T ss_pred             cCCCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCC--C
Confidence                             778999999999999999999999999999876431000        0000001123333  6


Q ss_pred             CChHHHHHHHHHHhcCCCccccccccccccccc
Q psy7936         172 KTPEQGAQTTLHCALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       172 ~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~  204 (222)
                      .+|+|+|+.++||++++...+++|+.+..++..
T Consensus       230 ~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~  262 (280)
T 1xkq_A          230 GKPEHIANIILFLADRNLSFYILGQSIVADGGT  262 (280)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             CCHHHHHHHHHHhcCcccccCccCCeEEECCCc
Confidence            899999999999974422679999999544433

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.96  E-value=8e-30  Score=207.02  Aligned_cols=180  Identities=17%  Similarity=0.196  Sum_probs=144.0

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe-CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ....++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+.++..          +.++.++++|+++.++
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~   77 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL----------GFDFYASEGNVGDWDS   77 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT----------TCCCEEEECCTTCHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc----------CCeeEEEecCCCCHHH
Confidence            3456899999999999999999999999999999988 6777777777777653          5688999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH----------------hhh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI----------------LSN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------  116 (222)
                      ++++++++.+.++++|++|||||+..                -+|                                   
T Consensus        78 v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  157 (256)
T 3ezl_A           78 TKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ  157 (256)
T ss_dssp             HHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC
Confidence            99999999999999999999999754                000                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..+++.++.+++++||+||+|+||+++|+|.....+. .........++++  ..+|+|+|+.++||
T Consensus       158 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~dva~~~~~l  234 (256)
T 3ezl_A          158 FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD-VLEKIVATIPVRR--LGSPDEIGSIVAWL  234 (256)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH-HHHHHHHHSTTSS--CBCHHHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHH-HHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                        78899999999999999999999999999998765422 1111112233444  67999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      + ++...+++|+.|..++
T Consensus       235 ~-s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          235 A-SEESGFSTGADFSLNG  251 (256)
T ss_dssp             H-SGGGTTCCSCEEEEST
T ss_pred             h-CCcccCCcCcEEEECC
Confidence            7 4557899999995444

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.96  E-value=2.1e-29  Score=205.42  Aligned_cols=182  Identities=15%  Similarity=0.112  Sum_probs=139.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++.+|++|||||++|||++++++|++.|++|++++|+.+. .+.+.+.++.          .+.++.++++|+++.++++
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~~v~   73 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD----------VEERLQFVQADVTKKEDLH   73 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG----------GGGGEEEEECCTTSHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh----------cCCceEEEEecCCCHHHHH
Confidence            3467999999999999999999999999999999877654 4444443332          2458999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhH--H----------------hhh-----------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYC--I----------------LSN-----------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~--~----------------l~~-----------------------------------  116 (222)
                      ++++++.+.++++|++|||||+.  .                -+|                                   
T Consensus        74 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  153 (264)
T 3i4f_A           74 KIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP  153 (264)
T ss_dssp             HHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC
T ss_pred             HHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC
Confidence            99999999999999999999931  1                000                                   


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                    +..+++.++.+++++||+||+|+||+++|+|.....+. .........|+++  ..+|+|+|+.++
T Consensus       154 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~p~~r--~~~~~dva~~v~  230 (264)
T 3i4f_A          154 GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQE-ARQLKEHNTPIGR--SGTGEDIARTIS  230 (264)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHH-HHHC--------C--CCCHHHHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHH-HHHHHhhcCCCCC--CcCHHHHHHHHH
Confidence                          78899999999999999999999999999998765422 1111113345555  789999999999


Q ss_pred             HHhcCCCccccccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYKVAKS  206 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~~~~~  206 (222)
                      ||++ +...++||+.|..++....
T Consensus       231 ~l~s-~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          231 FLCE-DDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             HHHS-GGGTTCCSCEEEESCSCCC
T ss_pred             HHcC-cccCCCCCcEEEEcCceee
Confidence            9974 4578999999955544443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.96  E-value=1.3e-29  Score=208.62  Aligned_cols=179  Identities=15%  Similarity=0.163  Sum_probs=142.5

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           6 AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      ++.++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+             +.++.++++|+++.
T Consensus        22 m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~   88 (281)
T 3ppi_A           22 MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-------------GNRAEFVSTNVTSE   88 (281)
T ss_dssp             --CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------------CTTEEEEECCTTCH
T ss_pred             hhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-------------CCceEEEEcCCCCH
Confidence            34567789999999999999999999999999999999999999888877665             34788999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEec-hhhHH---------------------hhh---------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINN-AVYCI---------------------LSN---------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~-ag~~~---------------------l~~---------------------------  116 (222)
                      ++++++++.+ +.++++|++||| +|...                     -+|                           
T Consensus        89 ~~v~~~~~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g  167 (281)
T 3ppi_A           89 DSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERG  167 (281)
T ss_dssp             HHHHHHHHHH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCE
T ss_pred             HHHHHHHHHH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCe
Confidence            9999999999 788999999999 54311                     000                           


Q ss_pred             --------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHH-HHH
Q psy7936         117 --------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVL-MWW  169 (222)
Q Consensus       117 --------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~  169 (222)
                                                +..+++.++.+++++||+||+|+||+++|+|....... .........++ ++ 
T Consensus       168 ~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~-  245 (281)
T 3ppi_A          168 ALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEE-ALAKFAANIPFPKR-  245 (281)
T ss_dssp             EEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHH-HHHHHHHTCCSSSS-
T ss_pred             EEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHH-HHHHHHhcCCCCCC-
Confidence                                      78899999999999999999999999999998765421 11111011122 23 


Q ss_pred             hcCChHHHHHHHHHHhcCCCccccccccccccccc
Q psy7936         170 WMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       170 ~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~  204 (222)
                       ..+|+|+|+.++||+++   .+++|++|..++..
T Consensus       246 -~~~pedvA~~v~~l~s~---~~~tG~~i~vdGG~  276 (281)
T 3ppi_A          246 -LGTPDEFADAAAFLLTN---GYINGEVMRLDGAQ  276 (281)
T ss_dssp             -CBCHHHHHHHHHHHHHC---SSCCSCEEEESTTC
T ss_pred             -CCCHHHHHHHHHHHHcC---CCcCCcEEEECCCc
Confidence             67999999999999854   58999999554443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.96  E-value=1.8e-29  Score=205.23  Aligned_cols=176  Identities=23%  Similarity=0.188  Sum_probs=142.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.++..          +.++.++++|+++.++++++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~   71 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA----------GGHAVAVKVDVSDRDQVFAAVE   71 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEecCCCHHHHHHHHH
Confidence            589999999999999999999999999999999999888888777653          4578899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHH----------------hhh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCI----------------LSN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------------  116 (222)
                      ++.+.++++|+||||||+..                -+|                                         
T Consensus        72 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  151 (256)
T 1geg_A           72 QARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAV  151 (256)
T ss_dssp             HHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchh
Confidence            99999999999999998632                000                                         


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC----------CCCCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD----------DTYFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                             +..+++.++.|++++||+||+|+||+++|+|.....          ............|+++  +.+|+|+|+
T Consensus       152 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dvA~  229 (256)
T 1geg_A          152 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGR--LSEPEDVAA  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCS--CBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCC--CcCHHHHHH
Confidence                   788999999999999999999999999999865321          1100011101123334  689999999


Q ss_pred             HHHHHhcCCCccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .++||++ +...+++|+.+..++
T Consensus       230 ~v~~l~s-~~~~~~tG~~i~vdG  251 (256)
T 1geg_A          230 CVSYLAS-PDSDYMTGQSLLIDG  251 (256)
T ss_dssp             HHHHHHS-GGGTTCCSCEEEESS
T ss_pred             HHHHHhC-ccccCCCCCEEEeCC
Confidence            9999974 456799999995444

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.96  E-value=2.5e-29  Score=205.11  Aligned_cols=174  Identities=14%  Similarity=0.085  Sum_probs=128.3

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           6 AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      .+.++++++|++|||||++|||+++|+.|+++|++|++++|+.+.+.+.   +...            .+.++.+|+++.
T Consensus        19 ~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~------------~~~~~~~Dv~~~   83 (260)
T 3gem_A           19 FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQA------------GAVALYGDFSCE   83 (260)
T ss_dssp             --------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHHH------------TCEEEECCTTSH
T ss_pred             cccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHhc------------CCeEEECCCCCH
Confidence            3456778999999999999999999999999999999999998765332   3221            267899999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH---------------hhh----------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI---------------LSN----------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~---------------l~~----------------------------------  116 (222)
                      ++++++++.+.+.++++|+||||||+..               -+|                                  
T Consensus        84 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~  163 (260)
T 3gem_A           84 TGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG  163 (260)
T ss_dssp             HHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC
Confidence            9999999999999999999999999653               000                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..|++.++.|+++ +|+||+|+||+++|++.....   .........|+++  ..+|+|+|+.++|
T Consensus       164 ~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~---~~~~~~~~~p~~r--~~~~edva~~v~~  237 (260)
T 3gem_A          164 SSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAA---YRANALAKSALGI--EPGAEVIYQSLRY  237 (260)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC------------------CCSCC--CCCTHHHHHHHHH
T ss_pred             CCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHH---HHHHHHhcCCCCC--CCCHHHHHHHHHH
Confidence                         78999999999998 699999999999999764221   1111112234444  6799999999999


Q ss_pred             HhcCCCcccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+   ...++||+.|..++.
T Consensus       238 L~---~~~~itG~~i~vdGG  254 (260)
T 3gem_A          238 LL---DSTYVTGTTLTVNGG  254 (260)
T ss_dssp             HH---HCSSCCSCEEEESTT
T ss_pred             Hh---hCCCCCCCEEEECCC
Confidence            97   356999999954443

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.96  E-value=2e-29  Score=205.59  Aligned_cols=182  Identities=21%  Similarity=0.258  Sum_probs=145.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+....         +.++.++++|+++.++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------~~~~~~~~~D~~~~~~~~   73 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF---------GVRVLEVAVDVATPEGVD   73 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---------CCCEEEEECCTTSHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc---------CCceEEEEcCCCCHHHHH
Confidence            35789999999999999999999999999999999999998888887776531         457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----------------hhh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----------------LSN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----------------l~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+..                -+|                                     
T Consensus        74 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  153 (263)
T 3ai3_A           74 AVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY  153 (263)
T ss_dssp             HHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC
Confidence            999999999999999999998642                000                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC----------CCCcchhhhH-HHHHHHhcCChH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD----------TYFPGARTLG-RVLMWWWMKTPE  175 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~p~  175 (222)
                                +..+++.++.+++++||+||+|+||+++|++......          .......... .|+++  ..+|+
T Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~  231 (263)
T 3ai3_A          154 EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKR--FASPE  231 (263)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCS--CBCHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCC--CcCHH
Confidence                      7889999999999999999999999999998653210          0000000011 23333  67999


Q ss_pred             HHHHHHHHHhcCCCcccccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+|+.++||++ +...+++|+.+..++.
T Consensus       232 dvA~~~~~l~s-~~~~~~~G~~~~vdgG  258 (263)
T 3ai3_A          232 ELANFFVFLCS-ERATYSVGSAYFVDGG  258 (263)
T ss_dssp             HHHHHHHHHTS-TTCTTCCSCEEEESTT
T ss_pred             HHHHHHHHHcC-ccccCCCCcEEEECCC
Confidence            99999999964 4567999999954443

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.96  E-value=2.9e-29  Score=206.40  Aligned_cols=182  Identities=23%  Similarity=0.193  Sum_probs=145.8

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      |.+|++|++|||||++|||+++++.|++.|++|++++|+.+.++++.+.++..          +.++.++.+|+++.+++
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dv~~~~~v   86 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA----------GVEADGRTCDVRSVPEI   86 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCceEEEECCCCCHHHH
Confidence            44688999999999999999999999999999999999999888888877653          45788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH--------------------------------h--h---h---------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI--------------------------------L--S---N---------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~--------------------------------l--~---~---------------  116 (222)
                      +++++.+.+.++++|+||||||+..                                .  .   .               
T Consensus        87 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~  166 (277)
T 2rhc_B           87 EALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG  166 (277)
T ss_dssp             HHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC
Confidence            9999999999999999999998632                                0  0   0               


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC----------CCCcchhhhHHHHHHHhcCC
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD----------TYFPGARTLGRVLMWWWMKT  173 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~  173 (222)
                                   +..+++.++.|++++||+||+|+||+++|+|......          ...........|+++  +.+
T Consensus       167 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~  244 (277)
T 2rhc_B          167 VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGR--YVQ  244 (277)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSS--CBC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCC--CcC
Confidence                         7889999999999999999999999999998653210          000000001123333  679


Q ss_pred             hHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         174 PEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       174 p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+|+|+.++||+ ++...+++|+.+..++.
T Consensus       245 ~~dvA~~v~~l~-s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          245 PSEVAEMVAYLI-GPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHh-CchhcCCCCcEEEECCC
Confidence            999999999997 44567999999954443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.96  E-value=8e-29  Score=204.71  Aligned_cols=181  Identities=19%  Similarity=0.186  Sum_probs=142.0

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC-
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS-   84 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~-   84 (222)
                      ....+|++|++|||||++|||+++++.|+++|++|++++|+. +.++++.+.+...         .+.++.++++|+++ 
T Consensus        16 ~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~---------~~~~~~~~~~Dv~~~   86 (288)
T 2x9g_A           16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE---------RSNTAVVCQADLTNS   86 (288)
T ss_dssp             ------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHH---------STTCEEEEECCCSCS
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhh---------cCCceEEEEeecCCc
Confidence            344668899999999999999999999999999999999998 8888888877633         25688999999999 


Q ss_pred             ---hhhHHHHHHHHHhhccceeEEEechhhHH----------h----------------h--------------------
Q psy7936          85 ---FKSIRDCAQDINQTEANVHILINNAVYCI----------L----------------S--------------------  115 (222)
Q Consensus        85 ---~~~v~~~~~~i~~~~~~id~li~~ag~~~----------l----------------~--------------------  115 (222)
                         .++++++++.+.+.++++|+||||||+..          .                +                    
T Consensus        87 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  166 (288)
T 2x9g_A           87 NVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTN  166 (288)
T ss_dssp             TTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC----
T ss_pred             cCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC
Confidence               99999999999999999999999998521          0                0                    


Q ss_pred             ------h---------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhh
Q psy7936         116 ------N---------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTL  162 (222)
Q Consensus       116 ------~---------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  162 (222)
                            .                           +..+++.++.+++++||+||+|+||+++|+| . ..+ ........
T Consensus       167 ~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~-~~~~~~~~  243 (288)
T 2x9g_A          167 PNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGE-EEKDKWRR  243 (288)
T ss_dssp             ----CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCH-HHHHHHHH
T ss_pred             CCCCCCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cCh-HHHHHHHh
Confidence                  0                           6789999999999999999999999999999 4 211 11111101


Q ss_pred             HHHHHHHhc-CChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         163 GRVLMWWWM-KTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       163 ~~~~~~~~~-~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ..|+++  . .+|+|+|+.++||++ +...+++|++|..++
T Consensus       244 ~~p~~r--~~~~pedvA~~v~~l~s-~~~~~itG~~i~vdG  281 (288)
T 2x9g_A          244 KVPLGR--REASAEQIADAVIFLVS-GSAQYITGSIIKVDG  281 (288)
T ss_dssp             TCTTTS--SCCCHHHHHHHHHHHHS-GGGTTCCSCEEEEST
T ss_pred             hCCCCC--CCCCHHHHHHHHHHHhC-ccccCccCCEEEECc
Confidence            123333  5 799999999999974 567899999995443

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.96  E-value=3.1e-29  Score=206.25  Aligned_cols=180  Identities=25%  Similarity=0.283  Sum_probs=145.1

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +++++++|++|||||++|||+++++.|++.|++|++++|+.+.++++.+++...          + ++.++.+|+++.++
T Consensus        23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------~-~~~~~~~Dv~d~~~   91 (276)
T 2b4q_A           23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY----------G-DCQAIPADLSSEAG   91 (276)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS----------S-CEEECCCCTTSHHH
T ss_pred             cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------C-ceEEEEeeCCCHHH
Confidence            345689999999999999999999999999999999999998888877776431          3 78899999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH---------------------------------hh--------h----------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI---------------------------------LS--------N----------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~---------------------------------l~--------~----------  116 (222)
                      ++++++.+.+.++++|+||||||+..                                 +.        .          
T Consensus        92 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~  171 (276)
T 2b4q_A           92 ARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG  171 (276)
T ss_dssp             HHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHH
Confidence            99999999999999999999998542                                 00        0          


Q ss_pred             -----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhh--HHHHHHHhcCChHHH
Q psy7936         117 -----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTL--GRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 -----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~e~  177 (222)
                                       +..+++.++.|++++||+||+|+||+++|+|....... .......  ..|+++  +.+|+|+
T Consensus       172 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~~r--~~~p~dv  248 (276)
T 2b4q_A          172 ISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND-PQALEADSASIPMGR--WGRPEEM  248 (276)
T ss_dssp             TCCCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC-HHHHHHHHHTSTTSS--CCCHHHH
T ss_pred             cCCCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh-HHHHHHhhcCCCCCC--cCCHHHH
Confidence                             67899999999999999999999999999987542211 1111101  223344  6799999


Q ss_pred             HHHHHHHhcCCCccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+.++||++ +...+++|+.|..++
T Consensus       249 A~~v~~l~s-~~~~~~tG~~i~vdG  272 (276)
T 2b4q_A          249 AALAISLAG-TAGAYMTGNVIPIDG  272 (276)
T ss_dssp             HHHHHHHHS-GGGTTCCSCEEEEST
T ss_pred             HHHHHHHhC-ccccCCCCCEEEeCC
Confidence            999999975 457799999995443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.96  E-value=6.7e-29  Score=203.52  Aligned_cols=177  Identities=21%  Similarity=0.190  Sum_probs=137.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ++|++|||||++|||+++|++|++.|++|+++ .|+.+.++++.+.+...          +.++.++.+|+++.++++++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~v~~~   94 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES----------GGEAVAIPGDVGNAADIAAM   94 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHHHHH
Confidence            57899999999999999999999999999776 78888888888887663          66899999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh-----------------hh--------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL-----------------SN--------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l-----------------~~--------------------------------------  116 (222)
                      ++.+.+.++++|+||||||+...                 +|                                      
T Consensus        95 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  174 (272)
T 4e3z_A           95 FSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS  174 (272)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC
T ss_pred             HHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC
Confidence            99999999999999999997430                 00                                      


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..++++++.+++++||+||+|+||+++|++.................++.+  ..+|+|+|+.++|
T Consensus       175 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~edvA~~i~~  252 (272)
T 4e3z_A          175 ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQR--AGMPEEVADAILY  252 (272)
T ss_dssp             TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSS--CBCHHHHHHHHHH
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCC--CcCHHHHHHHHHH
Confidence                         7889999999999999999999999999999765322222221112234444  6789999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+ ++...+++|+.|..++
T Consensus       253 l~-s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          253 LL-SPSASYVTGSILNVSG  270 (272)
T ss_dssp             HH-SGGGTTCCSCEEEEST
T ss_pred             Hh-CCccccccCCEEeecC
Confidence            96 5557899999995443

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.96  E-value=1.5e-29  Score=205.90  Aligned_cols=177  Identities=20%  Similarity=0.151  Sum_probs=142.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH--HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK--AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +|++|||||++|||++++++|+++|++|++++|+.+.  ++++.+.++..          +.++.++++|+++.++++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~   71 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA----------DQKAVFVGLDVTDKANFDSA   71 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT----------TCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHHHHH
Confidence            6899999999999999999999999999999999887  77777777542          45789999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh----------------hh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL----------------SN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------------  116 (222)
                      ++++.+.++++|+||||||+...                +|                                       
T Consensus        72 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  151 (258)
T 3a28_C           72 IDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPIL  151 (258)
T ss_dssp             HHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCc
Confidence            99999999999999999996430                00                                       


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC--------C--CCCcchhhhHHHHHHHhcCChHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD--------D--TYFPGARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~p~e~  177 (222)
                               +..+++.++.|++++||+||+|+||+++|+|.....        .  ...........|+++  +.+|+|+
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dv  229 (258)
T 3a28_C          152 SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGR--PSVPEDV  229 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSS--CBCHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCC--ccCHHHH
Confidence                     788999999999999999999999999999865411        1  111111111124444  7899999


Q ss_pred             HHHHHHHhcCCCcccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+.++||+ ++...+++|+.+..++.
T Consensus       230 A~~v~~l~-s~~~~~~tG~~i~vdGG  254 (258)
T 3a28_C          230 AGLVSFLA-SENSNYVTGQVMLVDGG  254 (258)
T ss_dssp             HHHHHHHH-SGGGTTCCSCEEEESSS
T ss_pred             HHHHHHHh-CcccCCCCCCEEEECCC
Confidence            99999997 44578999999954443

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=1.8e-29  Score=209.74  Aligned_cols=183  Identities=24%  Similarity=0.206  Sum_probs=144.8

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCC---eEEEEecCCCCh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG---EVLIKKLDLASF   85 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~D~~~~   85 (222)
                      |+++++|++|||||++|||+++++.|++.|++|++++|+.+.++++.+++...          +.   ++.++.+|+++.
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~~~~Dv~d~   90 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA----------GVPAEKINAVVADVTEA   90 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCGGGEEEEECCTTSH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCCCceEEEEecCCCCH
Confidence            45688999999999999999999999999999999999999988888887653          33   788999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH-----h-------------hh-------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI-----L-------------SN-------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~-----l-------------~~-------------------------------  116 (222)
                      ++++++++++.+.++++|+||||||+..     +             +|                               
T Consensus        91 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~  170 (297)
T 1xhl_A           91 SGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAG  170 (297)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhc
Confidence            9999999999999999999999998531     0             00                               


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC--------CcchhhhHHHHHHHhcC
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY--------FPGARTLGRVLMWWWMK  172 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~~~~~~~~  172 (222)
                                      +..+++.++.|++++||+||+|+||+++|+|........        .........|+++  +.
T Consensus       171 ~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~  248 (297)
T 1xhl_A          171 PQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGH--CG  248 (297)
T ss_dssp             SSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSS--CB
T ss_pred             cCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCC--Cc
Confidence                            678899999999999999999999999999876431000        0000001123333  68


Q ss_pred             ChHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         173 TPEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       173 ~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +|+|+|+.++||++++...+++|+.|..++.
T Consensus       249 ~pedvA~~v~~l~s~~~~~~itG~~i~vdGG  279 (297)
T 1xhl_A          249 KPEEIANIIVFLADRNLSSYIIGQSIVADGG  279 (297)
T ss_dssp             CHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCCcccCCccCcEEEECCC
Confidence            9999999999997443267999999954443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.96  E-value=3.4e-28  Score=194.99  Aligned_cols=169  Identities=19%  Similarity=0.232  Sum_probs=139.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...         .+.++.++++|+++.+++++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~v~~~~   71 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE---------QGVEVFYHHLDVSKAESVEEFS   71 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------HCCCEEEEECCTTCHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---------cCCeEEEEEeccCCHHHHHHHH
Confidence            3689999999999999999999999999999999999999998888754         2668999999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHHh----------------hh----------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCIL----------------SN----------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------------  116 (222)
                      +++.+.++++|++|||||+...                +|                                        
T Consensus        72 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y  151 (235)
T 3l77_A           72 KKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGY  151 (235)
T ss_dssp             C-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHH
T ss_pred             HHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchH
Confidence            9999999999999999997540                00                                        


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                            +..+++.++.  ..+||+||+|+||+++|+|...........         +  ..+|+|+|+.++||+.. ..
T Consensus       152 ~~sKaa~~~~~~~l~~--~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~---------~--~~~p~dva~~v~~l~~~-~~  217 (235)
T 3l77_A          152 VSTKWAARALVRTFQI--ENPDVRFFELRPGAVDTYFGGSKPGKPKEK---------G--YLKPDEIAEAVRCLLKL-PK  217 (235)
T ss_dssp             HHHHHHHHHHHHHHHH--HCTTSEEEEEEECSBSSSTTTCCSCCCGGG---------T--CBCHHHHHHHHHHHHTS-CT
T ss_pred             HHHHHHHHHHHHHHhh--cCCCeEEEEEeCCccccccccccCCccccc---------C--CCCHHHHHHHHHHHHcC-CC
Confidence                  6778888744  467899999999999999987665321111         2  68999999999999755 46


Q ss_pred             cccccccccccccc
Q psy7936         191 AKETGLYYSDYKVA  204 (222)
Q Consensus       191 ~~~~G~~i~~~~~~  204 (222)
                      .+++|+.+...+..
T Consensus       218 ~~~~~~~~~~~~~~  231 (235)
T 3l77_A          218 DVRVEELMLRSVYQ  231 (235)
T ss_dssp             TCCCCEEEECCTTS
T ss_pred             CCccceEEEeeccc
Confidence            78999988554443

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.96  E-value=1.4e-28  Score=203.58  Aligned_cols=175  Identities=31%  Similarity=0.408  Sum_probs=132.7

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           5 KAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         5 ~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      ...++++++||++|||||++|||++++++|+++|++|++++|+.+.++++.+.+             +.++.++++|+++
T Consensus         7 ~~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dl~d   73 (291)
T 3rd5_A            7 TAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-------------AGQVEVRELDLQD   73 (291)
T ss_dssp             CGGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-------------SSEEEEEECCTTC
T ss_pred             ChhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------------cCCeeEEEcCCCC
Confidence            344567899999999999999999999999999999999999998877665433             4589999999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHH--------------hhh----------------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCI--------------LSN----------------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~--------------l~~----------------------------------  116 (222)
                      .++++++++.+    +++|+||||||+..              -+|                                  
T Consensus        74 ~~~v~~~~~~~----~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~  149 (291)
T 3rd5_A           74 LSSVRRFADGV----SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINL  149 (291)
T ss_dssp             HHHHHHHHHTC----CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCS
T ss_pred             HHHHHHHHHhc----CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCc
Confidence            99999998876    78999999999754              000                                  


Q ss_pred             ----------------------HHHHHHHHHhhcCCCC--eEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcC
Q psy7936         117 ----------------------NILFYSILFYAIPGKN--VNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMK  172 (222)
Q Consensus       117 ----------------------~~~~~~~la~~~~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (222)
                                            +..+++.++.+++++|  |+||+|+||+++|+|........ .... ...+..+ ...
T Consensus       150 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~-~~~~-~~~~~~~-~~~  226 (291)
T 3rd5_A          150 EDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL-GDAL-MSAATRV-VAT  226 (291)
T ss_dssp             SCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------CH
T ss_pred             ccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH-HHHH-HHHHHHH-HhC
Confidence                                  6788999999998877  99999999999999988754321 1111 2223333 134


Q ss_pred             ChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         173 TPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       173 ~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+|+|+.++|++++   ++++|+++..++
T Consensus       227 ~~~~~A~~~~~l~~~---~~~~G~~~~vdg  253 (291)
T 3rd5_A          227 DADFGARQTLYAASQ---DLPGDSFVGPRF  253 (291)
T ss_dssp             HHHHHHHHHHHHHHS---CCCTTCEEEETT
T ss_pred             CHHHHHHHHHHHHcC---CCCCCceeCCcc
Confidence            599999999999876   389999995443

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.96  E-value=1.6e-28  Score=198.69  Aligned_cols=173  Identities=25%  Similarity=0.310  Sum_probs=140.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+++...          +.++.++++|+++.+++++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dv~~~~~~~~   73 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA----------GAKVHVLELDVADRQGVDA   73 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEECCCCCHHHHHH
Confidence            478999999999999999999999999999999999999988888887653          5578999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||+..                -+|                                      
T Consensus        74 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  153 (247)
T 2jah_A           74 AVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAA  153 (247)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCc
Confidence            99999999999999999999643                000                                      


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhc--CChHHHHHHHHHHhc
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWM--KTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~e~a~~i~~l~~  186 (222)
                              +..|+++++.|++++||+||+|+||+++|+|........ ........| ++  .  .+|+|+|+.++|+++
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~-~~--~~~~~pedvA~~v~~l~s  229 (247)
T 2jah_A          154 VYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA-TKEMYEQRI-SQ--IRKLQAQDIAEAVRYAVT  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HHHHHHHHT-TT--SCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh-hHHHHHhcc-cc--cCCCCHHHHHHHHHHHhC
Confidence                    688999999999999999999999999999976542111 000001111 22  4  899999999999976


Q ss_pred             CCCccccccccc
Q psy7936         187 DEGAAKETGLYY  198 (222)
Q Consensus       187 ~~~~~~~~G~~i  198 (222)
                      ++ ..++++...
T Consensus       230 ~~-~~~~~~~i~  240 (247)
T 2jah_A          230 AP-HHATVHEIF  240 (247)
T ss_dssp             SC-TTEEEEEEE
T ss_pred             CC-ccCccceEE
Confidence            54 556666543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.96  E-value=1.7e-28  Score=206.57  Aligned_cols=180  Identities=14%  Similarity=0.103  Sum_probs=143.8

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe-CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh-
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK-   86 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~-   86 (222)
                      |..|++|++|||||++|||+++++.|++.|++|++++ |+.+.++++.+.+...         .+.++.++++|+++.+ 
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~Dl~d~~~  111 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR---------RPNSAITVQADLSNVAT  111 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---------STTCEEEEECCCSSSCB
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh---------cCCeEEEEEeeCCCchh
Confidence            3347899999999999999999999999999999999 9999988888887633         2568899999999999 


Q ss_pred             ----------------hHHHHHHHHHhhccceeEEEechhhH-----------------------H--------------
Q psy7936          87 ----------------SIRDCAQDINQTEANVHILINNAVYC-----------------------I--------------  113 (222)
Q Consensus        87 ----------------~v~~~~~~i~~~~~~id~li~~ag~~-----------------------~--------------  113 (222)
                                      +++++++.+.+.++++|+||||||+.                       .              
T Consensus       112 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~  191 (328)
T 2qhx_A          112 APVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAP  191 (328)
T ss_dssp             CC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHH
T ss_pred             ccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHH
Confidence                            99999999999999999999999863                       1              


Q ss_pred             ----------h---h------h---------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCc
Q psy7936         114 ----------L---S------N---------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTEL  147 (222)
Q Consensus       114 ----------l---~------~---------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~  147 (222)
                                +   .      .                           +..|++.|+.|++++||+||+|+||+++|+|
T Consensus       192 ~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  271 (328)
T 2qhx_A          192 YFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  271 (328)
T ss_dssp             HHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred             HHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence                      0   0      1                           7889999999999999999999999999999


Q ss_pred             CCCCCCCCCcchhhhHHHHH-HHhcCChHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         148 GRYMDDTYFPGARTLGRVLM-WWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~-~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                       ....  ..........|++ +  +.+|+|+|+.++||++ +...+++|++|..++.
T Consensus       272 -~~~~--~~~~~~~~~~p~~~r--~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG  322 (328)
T 2qhx_A          272 -DMPP--AVWEGHRSKVPLYQR--DSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGG  322 (328)
T ss_dssp             -CSCH--HHHHHHHTTCTTTTS--CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             -cccH--HHHHHHHhhCCCCCC--CCCHHHHHHHHHHHhC-ccccCccCcEEEECCC
Confidence             4321  1111111112333 3  7899999999999974 4578999999954443

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.96  E-value=4.7e-29  Score=205.60  Aligned_cols=181  Identities=20%  Similarity=0.205  Sum_probs=142.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .+.+++|++|||||++|||+++++.|+++|++|++++|+.+. .+++.+.+...          +.++.++.+|+++.++
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~   93 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN----------GSDAACVKANVGVVED   93 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh----------CCCeEEEEcCCCCHHH
Confidence            355789999999999999999999999999999999998754 55666666542          5678899999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      +.++++.+.+.++++|+||||||+...                +|                                   
T Consensus        94 ~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  173 (283)
T 1g0o_A           94 IVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP  173 (283)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC
Confidence            999999999999999999999996530                00                                   


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC----C-C-----Ccchhhh--HHHHHHHhcCC
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD----T-Y-----FPGARTL--GRVLMWWWMKT  173 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~----~-~-----~~~~~~~--~~~~~~~~~~~  173 (222)
                                 +..+++.++.|++++||+||+|+||+++|+|......    . .     .......  ..|+++  +.+
T Consensus       174 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~  251 (283)
T 1g0o_A          174 KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR--VGL  251 (283)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCS--CBC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCC--CcC
Confidence                       7889999999999999999999999999998653210    0 0     0001101  123334  679


Q ss_pred             hHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         174 PEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       174 p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+|+|+.++||++ +...+++|+.+..++
T Consensus       252 p~dvA~~v~~l~s-~~~~~itG~~i~vdg  279 (283)
T 1g0o_A          252 PIDIARVVCFLAS-NDGGWVTGKVIGIDG  279 (283)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhC-ccccCcCCCEEEeCC
Confidence            9999999999974 456799999995443

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.96  E-value=9.1e-29  Score=202.42  Aligned_cols=170  Identities=18%  Similarity=0.157  Sum_probs=135.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+.+|++|||||++|||+++++.|++.|++|++++|+.+.++++                ...++.++++|+++.++++
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~----------------~~~~~~~~~~Dv~d~~~v~   75 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL----------------NLPNTLCAQVDVTDKYTFD   75 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT----------------CCTTEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh----------------hcCCceEEEecCCCHHHHH
Confidence            347889999999999999999999999999999999998765432                1336789999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----------------hhh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----------------LSN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----------------l~~-------------------------------------  116 (222)
                      ++++.+.+.++++|+||||||+..                -+|                                     
T Consensus        76 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~  155 (266)
T 3p19_A           76 TAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPD  155 (266)
T ss_dssp             HHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCC
Confidence            999999999999999999999753                000                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhh-hHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGART-LGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                +..++++++.+++++||+||+|+||+++|+|.............. ...|+++  ..+|+|+|+.++|++
T Consensus       156 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r--~~~pedvA~av~~l~  233 (266)
T 3p19_A          156 HAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGG--VLAADDVARAVLFAY  233 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTC--CBCHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccC--CCCHHHHHHHHHHHH
Confidence                      889999999999999999999999999999987654321111110 1234544  789999999999998


Q ss_pred             cCCCccccccccc
Q psy7936         186 LDEGAAKETGLYY  198 (222)
Q Consensus       186 ~~~~~~~~~G~~i  198 (222)
                      ..+. ....+..+
T Consensus       234 ~~~~-~~~~~~i~  245 (266)
T 3p19_A          234 QQPQ-NVCIREIA  245 (266)
T ss_dssp             HSCT-TEEEEEEE
T ss_pred             cCCC-CccceeeE
Confidence            7764 44455444

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.96  E-value=4.3e-29  Score=203.68  Aligned_cols=167  Identities=19%  Similarity=0.126  Sum_probs=136.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      |+.+++|++|||||++|||+++|+.|+++|++|++++|+.+..                   ...++.++++|+++.+++
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------------~~~~~~~~~~Dv~d~~~v   83 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS-------------------ADPDIHTVAGDISKPETA   83 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC-------------------SSTTEEEEESCTTSHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc-------------------ccCceEEEEccCCCHHHH
Confidence            4567899999999999999999999999999999999986532                   133688999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      +++++++.+.++++|++|||||+..                -+|                                    
T Consensus        84 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~  163 (260)
T 3un1_A           84 DRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMV  163 (260)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBT
T ss_pred             HHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCC
Confidence            9999999999999999999999753                000                                    


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..++++++.+++++||+||+|+||+++|+|.....    ........|+++  ..+|+|+|+.++|
T Consensus       164 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~p~~r--~~~~~dva~av~~  237 (260)
T 3un1_A          164 GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET----HSTLAGLHPVGR--MGEIRDVVDAVLY  237 (260)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG----HHHHHTTSTTSS--CBCHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH----HHHHhccCCCCC--CcCHHHHHHHHHH
Confidence                         789999999999999999999999999999875321    111112234555  7899999999999


Q ss_pred             HhcCCCcccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |.   ...+++|+.|..++.
T Consensus       238 L~---~~~~itG~~i~vdGG  254 (260)
T 3un1_A          238 LE---HAGFITGEILHVDGG  254 (260)
T ss_dssp             HH---HCTTCCSCEEEESTT
T ss_pred             hc---ccCCCCCcEEEECCC
Confidence            93   456999999954443

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.96  E-value=2.8e-28  Score=199.15  Aligned_cols=179  Identities=15%  Similarity=0.096  Sum_probs=139.1

Q ss_pred             CCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          11 RLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        11 ~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .|++|++|||||+  +|||+++++.|+++|++|++++|+. ..++..+.+....         + ...++++|+++.+++
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~---------~-~~~~~~~D~~~~~~v   74 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL---------G-SDIVLQCDVAEDASI   74 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHT---------T-CCCEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhc---------C-CcEEEEccCCCHHHH
Confidence            4789999999999  9999999999999999999999987 4444445554431         2 237889999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------h-----------h-------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------S-----------N-------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------~-----------~-------------------------------  116 (222)
                      +++++.+.+.++++|+||||||+...          .           |                               
T Consensus        75 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~  154 (265)
T 1qsg_A           75 DTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER  154 (265)
T ss_dssp             HHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc
Confidence            99999999999999999999985310          0           0                               


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                    +..+++.++.+++++||+||+|+||+++|+|....... ..........|+++  +.+|+|+|+.+
T Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~dva~~v  232 (265)
T 1qsg_A          155 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR--TVTIEDVGNSA  232 (265)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSS--CCCHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCC--CCCHHHHHHHH
Confidence                          78999999999999999999999999999987653210 01011101123333  67999999999


Q ss_pred             HHHhcCCCcccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +||+ ++...+++|+.+..++.
T Consensus       233 ~~l~-s~~~~~~tG~~~~vdgG  253 (265)
T 1qsg_A          233 AFLC-SDLSAGISGEVVHVDGG  253 (265)
T ss_dssp             HHHT-SGGGTTCCSCEEEESTT
T ss_pred             HHHh-CchhcCccCCEEEECCC
Confidence            9996 44578999999954443

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.96  E-value=2.5e-29  Score=206.06  Aligned_cols=176  Identities=19%  Similarity=0.176  Sum_probs=136.7

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ...++++|++|||||++|||+++|+.|+++|++|++++|+.+..                    ...+.++++|+++.++
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~--------------------~~~~~~~~~Dv~~~~~   67 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD--------------------VNVSDHFKIDVTNEEE   67 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C--------------------TTSSEEEECCTTCHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc--------------------cCceeEEEecCCCHHH
Confidence            34667999999999999999999999999999999999987643                    1145678999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      ++++++.+.+.++++|+||||||+...                +|                                   
T Consensus        68 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  147 (269)
T 3vtz_A           68 VKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT  147 (269)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC
Confidence            999999999999999999999997540                01                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC-----C-----CCcchhhhHHHHHHHhcCCh
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD-----T-----YFPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~p  174 (222)
                                  +..++++++.|+++ ||+||+|+||+++|+|......     .     ..........|+++  ..+|
T Consensus       148 ~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p  224 (269)
T 3vtz_A          148 KNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGR--IGRP  224 (269)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSS--CBCH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCC--CcCH
Confidence                        78999999999988 8999999999999998653210     0     00011111223444  6799


Q ss_pred             HHHHHHHHHHhcCCCccccccccc-ccccccccC
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYY-SDYKVAKSR  207 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i-~~~~~~~~~  207 (222)
                      +|+|+.++||++ +...++||+.| .++|.....
T Consensus       225 edvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~~  257 (269)
T 3vtz_A          225 EEVAEVVAFLAS-DRSSFITGACLTVDGGLLSKL  257 (269)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHHHHHHHHhC-CccCCCcCcEEEECCCccccC
Confidence            999999999974 46789999999 455544433

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.96  E-value=5.2e-29  Score=202.22  Aligned_cols=177  Identities=19%  Similarity=0.176  Sum_probs=142.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++             +.++.++++|+++.+++++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~v~~   69 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-------------GERSMFVRHDVSSEADWTL   69 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-------------CTTEEEECCCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------------CCceEEEEccCCCHHHHHH
Confidence            478999999999999999999999999999999999998877766554             2367899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||+...                +|                                      
T Consensus        70 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  149 (253)
T 1hxh_A           70 VMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYA  149 (253)
T ss_dssp             HHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCc
Confidence            999999999999999999996430                00                                      


Q ss_pred             --------HHHHHHHHHhhcCCC--CeEEEEEeCCcccCCcCCCCCCCCCcch-hhh---HHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------NILFYSILFYAIPGK--NVNVYAVHPGIVKTELGRYMDDTYFPGA-RTL---GRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~--gI~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~p~e~a~~i~  182 (222)
                              +..+++.++.|++++  ||+||+|+||+++|+|............ ...   ..|+++  ..+|+|+|+.++
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~dvA~~~~  227 (253)
T 1hxh_A          150 GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGR--AYMPERIAQLVL  227 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCC--EECHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCC--CCCHHHHHHHHH
Confidence                    788999999999887  9999999999999998654211111111 101   224444  679999999999


Q ss_pred             HHhcCCCcccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ||++ +...+++|+.+..++.
T Consensus       228 ~l~s-~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          228 FLAS-DESSVMSGSELHADNS  247 (253)
T ss_dssp             HHHS-GGGTTCCSCEEEESSS
T ss_pred             HHcC-ccccCCCCcEEEECCC
Confidence            9974 4567999999955443

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.96  E-value=6.5e-29  Score=203.35  Aligned_cols=178  Identities=13%  Similarity=0.088  Sum_probs=138.3

Q ss_pred             CCCCCCEEEEecC--CCchHHHHHHHHHhCCCEEEEEeCChhH-HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          10 SRLDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEK-AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        10 ~~~~~k~~lVtGa--s~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ..|++|++|||||  ++|||+++++.|++.|++|++++|+.+. ++++.+.             .+.++.++++|+++.+
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~~   69 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR-------------LPAKAPLLELDVQNEE   69 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT-------------SSSCCCEEECCTTCHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh-------------cCCCceEEEccCCCHH
Confidence            3478999999999  9999999999999999999999998765 3333221             1346788999999999


Q ss_pred             hHHHHHHHHHhhcc---ceeEEEechhhHH--------h-------------hh--------------------------
Q psy7936          87 SIRDCAQDINQTEA---NVHILINNAVYCI--------L-------------SN--------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~---~id~li~~ag~~~--------l-------------~~--------------------------  116 (222)
                      +++++++++.+.++   ++|++|||||+..        +             +|                          
T Consensus        70 ~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss  149 (269)
T 2h7i_A           70 HLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDF  149 (269)
T ss_dssp             HHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcC
Confidence            99999999999998   9999999998642        0             00                          


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC----CCCc-------chhhhHHHHH
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD----TYFP-------GARTLGRVLM  167 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~----~~~~-------~~~~~~~~~~  167 (222)
                                        +..++++++.+++++||+||+|+||+++|+|......    ....       .......|++
T Consensus       150 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  229 (269)
T 2h7i_A          150 DPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG  229 (269)
T ss_dssp             CCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC
T ss_pred             ccccccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcc
Confidence                              7889999999999999999999999999998654211    0000       0000112333


Q ss_pred             -HHhcCChHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         168 -WWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       168 -~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                       +  +.+|+|+|+.++||+ ++...++||+.|..++.
T Consensus       230 rr--~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdGG  263 (269)
T 2h7i_A          230 WN--MKDATPVAKTVCALL-SDWLPATTGDIIYADGG  263 (269)
T ss_dssp             CC--TTCCHHHHHHHHHHH-SSSCTTCCSEEEEESTT
T ss_pred             cC--CCCHHHHHHHHHHHh-CchhccCcceEEEecCC
Confidence             3  679999999999997 45678999999955443

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=3.3e-28  Score=199.80  Aligned_cols=184  Identities=23%  Similarity=0.173  Sum_probs=140.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+.....       .+.++.++.+|+++.++++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~   74 (278)
T 1spx_A            2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV-------SEQNVNSVVADVTTDAGQD   74 (278)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-------CGGGEEEEECCTTSHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccc-------CCCceeEEecccCCHHHHH
Confidence            347899999999999999999999999999999999999988888777743210       2457889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH------h--------------hh---------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI------L--------------SN---------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~------l--------------~~---------------------------------  116 (222)
                      ++++.+.+.++++|+||||||...      .              +|                                 
T Consensus        75 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~  154 (278)
T 1spx_A           75 EILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH  154 (278)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEeccccccc
Confidence            999999999999999999998642      0              00                                 


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC--CCC------cchhhhHHHHHHHhcCCh
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD--TYF------PGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~p  174 (222)
                                    +..+++.++.+++++||+||+|+||+++|+|......  ...      ........|+++  +.+|
T Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~  232 (278)
T 1spx_A          155 ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGV--MGQP  232 (278)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSS--CBCH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcC--CCCH
Confidence                          6889999999999999999999999999998764311  111      111101123333  6799


Q ss_pred             HHHHHHHHHHhcCCCccc-ccccccc-cccc
Q psy7936         175 EQGAQTTLHCALDEGAAK-ETGLYYS-DYKV  203 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~-~~G~~i~-~~~~  203 (222)
                      +|+|+.++||+++ ...+ ++|+.+. +++.
T Consensus       233 ~dvA~~v~~l~s~-~~~~~~tG~~~~vdgG~  262 (278)
T 1spx_A          233 QDIAEVIAFLADR-KTSSYIIGHQLVVDGGS  262 (278)
T ss_dssp             HHHHHHHHHHHCH-HHHTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHcCc-cccCcccCcEEEECCCc
Confidence            9999999999754 3455 9999995 4443

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.95  E-value=3.4e-28  Score=198.27  Aligned_cols=180  Identities=17%  Similarity=0.142  Sum_probs=140.0

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          10 SRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ..|++|++|||||+  +|||+++++.|+++|++|++++|+.+ .++..+.+....         + .+.++++|+++.++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~---------~-~~~~~~~D~~~~~~   72 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL---------G-GALLFRADVTQDEE   72 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT---------T-CCEEEECCTTCHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc---------C-CcEEEECCCCCHHH
Confidence            35789999999999  99999999999999999999999985 444444454431         2 36889999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh--------------------hh-------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL--------------------SN-------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l--------------------~~-------------------------------  116 (222)
                      ++++++.+.+.++++|++|||||+...                    +|                               
T Consensus        73 v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~  152 (261)
T 2wyu_A           73 LDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK  152 (261)
T ss_dssp             HHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC
Confidence            999999999999999999999986320                    00                               


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                    +..+++.++.+++++||+||+|+||+++|++....... ..........|+++  ..+|+|+|+.+
T Consensus       153 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~dva~~v  230 (261)
T 2wyu_A          153 VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRR--NITQEEVGNLG  230 (261)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSS--CCCHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCC--CCCHHHHHHHH
Confidence                          78899999999999999999999999999987643211 01111111123333  67999999999


Q ss_pred             HHHhcCCCcccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +||++ +...+++|+.+..++.
T Consensus       231 ~~l~s-~~~~~~tG~~~~vdgG  251 (261)
T 2wyu_A          231 LFLLS-PLASGITGEVVYVDAG  251 (261)
T ss_dssp             HHHHS-GGGTTCCSCEEEESTT
T ss_pred             HHHcC-hhhcCCCCCEEEECCC
Confidence            99974 4577999999954443

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=2.5e-28  Score=198.51  Aligned_cols=175  Identities=24%  Similarity=0.201  Sum_probs=137.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+. +++.+.+            .  + .++++|+++.++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~------------~--~-~~~~~D~~~~~~~~   65 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI------------G--G-AFFQVDLEDERERV   65 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH------------T--C-EEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh------------h--C-CEEEeeCCCHHHHH
Confidence            45789999999999999999999999999999999999876 5554433            1  3 68899999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+...                +|                                     
T Consensus        66 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  145 (256)
T 2d1y_A           66 RFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE  145 (256)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC
Confidence            9999999999999999999986430                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCC----C-CCCCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYM----D-DTYFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                +..+++.++.+++++||+||+|+||+++|+|....    . ............|+++  ..+|+|+|+.+
T Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dvA~~~  223 (256)
T 2d1y_A          146 NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRR--LGKPEEVAEAV  223 (256)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSS--CBCHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCC--CcCHHHHHHHH
Confidence                      78899999999999999999999999999986532    1 1111111111223334  68999999999


Q ss_pred             HHHhcCCCcccccccccccccc
Q psy7936         182 LHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ++|++ +...+++|+.+..++.
T Consensus       224 ~~l~s-~~~~~~~G~~~~v~gG  244 (256)
T 2d1y_A          224 LFLAS-EKASFITGAILPVDGG  244 (256)
T ss_dssp             HHHHS-GGGTTCCSCEEEESTT
T ss_pred             HHHhC-chhcCCCCCEEEECCC
Confidence            99974 4567999999954433

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.95  E-value=6.5e-29  Score=202.60  Aligned_cols=178  Identities=24%  Similarity=0.204  Sum_probs=139.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      +++|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+             ..++.++++|+++.+++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~d~~~v   73 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-------------ENGGFAVEVDVTKRASV   73 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-------------TTCCEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-------------hcCCeEEEEeCCCHHHH
Confidence            45688999999999999999999999999999999999998776654433             12567899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      +++++.+.+.++++|+||||||+..                -+|                                    
T Consensus        74 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  153 (263)
T 3ak4_A           74 DAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA  153 (263)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC
Confidence            9999999999999999999998642                000                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC-----C-----CCCcchhhhHHHHHHHhcCCh
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD-----D-----TYFPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~p  174 (222)
                                  +..+++.++.+++++||+||+|+||+++|+|.....     .     ...........|+++  +.+|
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~  231 (263)
T 3ak4_A          154 PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGR--IEEP  231 (263)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCS--CBCH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCC--CcCH
Confidence                        788999999999999999999999999999865321     0     000000001113333  6799


Q ss_pred             HHHHHHHHHHhcCCCccccccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+|+.++||++ +...+++|+.+..++
T Consensus       232 ~dvA~~v~~l~s-~~~~~~tG~~~~vdg  258 (263)
T 3ak4_A          232 EDVADVVVFLAS-DAARFMTGQGINVTG  258 (263)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESS
T ss_pred             HHHHHHHHHHhC-ccccCCCCCEEEECc
Confidence            999999999974 456799999985443

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.95  E-value=4.2e-28  Score=196.94  Aligned_cols=183  Identities=25%  Similarity=0.294  Sum_probs=145.4

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ++.+++++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.++..          +.++.++++|+++.+
T Consensus         6 ~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~   75 (260)
T 3awd_A            6 MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME----------GHDVSSVVMDVTNTE   75 (260)
T ss_dssp             TGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHH
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCceEEEEecCCCHH
Confidence            3345688999999999999999999999999999999999998888887777653          457899999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH-----------------hhh---------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI-----------------LSN---------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~---------------------------------  116 (222)
                      +++++++.+.+.++++|++|||||...                 -+|                                 
T Consensus        76 ~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  155 (260)
T 3awd_A           76 SVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLI  155 (260)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcc
Confidence            999999999999999999999998532                 000                                 


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCC-CCCCCCCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGR-YMDDTYFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                      +..+++.++.+++++||+|++|.||++.|++.. ......+........|+++  ..+|+|+|+
T Consensus       156 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~  233 (260)
T 3awd_A          156 VNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGR--VGQPDEVAS  233 (260)
T ss_dssp             CCSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSS--CBCHHHHHH
T ss_pred             cCCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCC--CCCHHHHHH
Confidence                            678889999999989999999999999999876 3221111111101123333  679999999


Q ss_pred             HHHHHhcCCCccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .+++++.. ...+++|+.+..++
T Consensus       234 ~~~~l~~~-~~~~~~G~~~~v~g  255 (260)
T 3awd_A          234 VVQFLASD-AASLMTGAIVNVDA  255 (260)
T ss_dssp             HHHHHHSG-GGTTCCSCEEEEST
T ss_pred             HHHHHhCc-hhccCCCcEEEECC
Confidence            99999744 46789999884443

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.95  E-value=4.2e-29  Score=204.43  Aligned_cols=173  Identities=22%  Similarity=0.161  Sum_probs=134.6

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+|+++++|++|||||++|||+++|+.|+++|++|++++|+.+.+.                     ....+.+|+++.+
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~---------------------~~~~~~~Dv~~~~   79 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA---------------------ADLHLPGDLREAA   79 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC---------------------CSEECCCCTTSHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------hhhccCcCCCCHH
Confidence            4567789999999999999999999999999999999999865321                     1245689999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------  116 (222)
                      ++.++++.+.+.++++|+||||||+...                +|                                  
T Consensus        80 ~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  159 (266)
T 3uxy_A           80 YADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP  159 (266)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC
Confidence            9999999999999999999999997540                01                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-Cc-----chhhhHHHHHHHhcCChHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FP-----GARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~p~e~  177 (222)
                                   +..++++++.+++++||+||+|+||+++|+|........ ..     .......|+++  ..+|+|+
T Consensus       160 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedv  237 (266)
T 3uxy_A          160 GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGR--IAEPEDI  237 (266)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSS--CBCHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCC--CcCHHHH
Confidence                         789999999999999999999999999999875432110 00     11112233444  6799999


Q ss_pred             HHHHHHHhcCCCcccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+.++||+ ++...++||+.|..++.
T Consensus       238 A~~v~~L~-s~~~~~itG~~i~vdGG  262 (266)
T 3uxy_A          238 ADVVLFLA-SDAARYLCGSLVEVNGG  262 (266)
T ss_dssp             HHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHh-CchhcCCcCCEEEECcC
Confidence            99999997 44578999999954443

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.95  E-value=3.8e-28  Score=197.35  Aligned_cols=172  Identities=25%  Similarity=0.279  Sum_probs=129.5

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+..++++|++|||||++|||+++++.|++.|++|++++|+.+.++                     .+.++++|+++.+
T Consensus        14 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------~~~~~~~Dl~d~~   72 (253)
T 2nm0_A           14 LVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE---------------------GFLAVKCDITDTE   72 (253)
T ss_dssp             ------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------------------TSEEEECCTTSHH
T ss_pred             CCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc---------------------cceEEEecCCCHH
Confidence            3446688999999999999999999999999999999999865321                     2568899999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------  116 (222)
                      +++++++.+.+.++++|+||||||+...                +|                                  
T Consensus        73 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  152 (253)
T 2nm0_A           73 QVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG  152 (253)
T ss_dssp             HHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC
Confidence            9999999999999999999999997430                00                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..+++.++.+++++||+||+|+||+++|+|....... .........|+++  +.+|+|+|+.+++
T Consensus       153 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~p~~~--~~~p~dvA~~i~~  229 (253)
T 2nm0_A          153 SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDE-QRANIVSQVPLGR--YARPEEIAATVRF  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHHHTTCTTCS--CBCHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHH-HHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                         78899999999999999999999999999997654321 1111111123344  6899999999999


Q ss_pred             HhcCCCcccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |++ +...+++|+.+..++.
T Consensus       230 l~s-~~~~~~tG~~i~vdGG  248 (253)
T 2nm0_A          230 LAS-DDASYITGAVIPVDGG  248 (253)
T ss_dssp             HHS-GGGTTCCSCEEEESTT
T ss_pred             HhC-ccccCCcCcEEEECCc
Confidence            975 4567999999954443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.95  E-value=4.4e-28  Score=197.24  Aligned_cols=178  Identities=17%  Similarity=0.204  Sum_probs=142.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHh---CCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYG---IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ..|++|++|||||++|||+++++.|++   .|++|++++|+.+.++++.+++....        ++.++.++++|+++.+
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~Dv~~~~   73 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ--------PDLKVVLAAADLGTEA   73 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC--------TTSEEEEEECCTTSHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC--------CCCeEEEEecCCCCHH
Confidence            357899999999999999999999999   89999999999999988888886642        3568999999999999


Q ss_pred             hHHHHHHHHHh--hcccee--EEEechhhHH---------hh-------------------------------h------
Q psy7936          87 SIRDCAQDINQ--TEANVH--ILINNAVYCI---------LS-------------------------------N------  116 (222)
Q Consensus        87 ~v~~~~~~i~~--~~~~id--~li~~ag~~~---------l~-------------------------------~------  116 (222)
                      +++++++.+.+  .++++|  +||||||+..         ..                               .      
T Consensus        74 ~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~  153 (259)
T 1oaa_A           74 GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVN  153 (259)
T ss_dssp             HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEE
T ss_pred             HHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEE
Confidence            99999999987  667888  9999999631         00                               0      


Q ss_pred             ----------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC----CCCcchhhhHHHHHHHh
Q psy7936         117 ----------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD----TYFPGARTLGRVLMWWW  170 (222)
Q Consensus       117 ----------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~~~~~  170 (222)
                                            +..++++++.|+++  |+||+|+||+++|+|......    ...........|.++  
T Consensus       154 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~--  229 (259)
T 1oaa_A          154 ISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGA--  229 (259)
T ss_dssp             ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTC--
T ss_pred             EcCchhcCCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCC--
Confidence                                  78999999999974  999999999999998654311    011111112234444  


Q ss_pred             cCChHHHHHHHHHHhcCCCcccccccccccc
Q psy7936         171 MKTPEQGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       171 ~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      +.+|+|+|+.++|++++  ..++||+++..+
T Consensus       230 ~~~p~dvA~~v~~l~~~--~~~itG~~i~vd  258 (259)
T 1oaa_A          230 LVDCGTSAQKLLGLLQK--DTFQSGAHVDFY  258 (259)
T ss_dssp             SBCHHHHHHHHHHHHHH--CCSCTTEEEETT
T ss_pred             cCCHHHHHHHHHHHHhh--ccccCCcEEecc
Confidence            78999999999999863  479999998544

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.95  E-value=1.4e-28  Score=199.85  Aligned_cols=176  Identities=24%  Similarity=0.229  Sum_probs=138.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |++|++|||||++|||+++++.|+++|++|++++|+.+  ++..+.+..          .+.++.++.+|+++.++++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~----------~~~~~~~~~~D~~~~~~v~~~   69 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIAR----------HGVKAVHHPADLSDVAQIEAL   69 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHT----------TSCCEEEECCCTTSHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHh----------cCCceEEEeCCCCCHHHHHHH
Confidence            67899999999999999999999999999999999876  445555543          245788999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH----------------hhh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI----------------LSN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------------  116 (222)
                      ++.+.+.++++|++|||||+..                -+|                                       
T Consensus        70 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  149 (255)
T 2q2v_A           70 FALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKA  149 (255)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCch
Confidence            9999999999999999998642                000                                       


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC--CCC---c----chh-hhHHHHHHHhcCChHHHH
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD--TYF---P----GAR-TLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~---~----~~~-~~~~~~~~~~~~~p~e~a  178 (222)
                              +..+++.++.|++++||+||+|+||+++|+|......  ...   .    ... ....|.++  +.+|+|+|
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~dvA  227 (255)
T 2q2v_A          150 AYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLA--FVTPEHLG  227 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCC--CBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCC--CcCHHHHH
Confidence                    7899999999999999999999999999998653210  000   0    000 01122333  67999999


Q ss_pred             HHHHHHhcCCCccccccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.++||++ +...+++|+.|..++
T Consensus       228 ~~~~~l~s-~~~~~~tG~~~~vdg  250 (255)
T 2q2v_A          228 ELVLFLCS-EAGSQVRGAAWNVDG  250 (255)
T ss_dssp             HHHHHHTS-GGGTTCCSCEEEEST
T ss_pred             HHHHHHhC-CccCCCCCCEEEECC
Confidence            99999964 456799999995443

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=3.1e-28  Score=199.55  Aligned_cols=176  Identities=20%  Similarity=0.207  Sum_probs=140.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+++              ..+.++++|+++.++++
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------~~~~~~~~Dv~d~~~v~   70 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL--------------PGAVFILCDVTQEDDVK   70 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--------------TTEEEEECCTTSHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------cCCeEEEcCCCCHHHHH
Confidence            4578999999999999999999999999999999999998776655432              13678999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-----------------hhh------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-----------------LSN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-----------------l~~------------------------------------  116 (222)
                      ++++++.+.++++|++|||||...                 -+|                                    
T Consensus        71 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~  150 (270)
T 1yde_A           71 TLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ  150 (270)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCC
Confidence            999999999999999999998642                 000                                    


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCc-chh---hhHHHHHHHhcCChHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFP-GAR---TLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~-~~~---~~~~~~~~~~~~~p~e~a~~i  181 (222)
                                +..+++.++.+++++||+||+|+||+++|+|....... ... ...   ....|+++  +.+|+|+|+.+
T Consensus       151 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dva~~v  228 (270)
T 1yde_A          151 AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGR--MGQPAEVGAAA  228 (270)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSS--CBCHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCC--CcCHHHHHHHH
Confidence                      78899999999999999999999999999986532110 010 000   01124444  68999999999


Q ss_pred             HHHhcCCCcccccccccc-cccc
Q psy7936         182 LHCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      .||+++  ..++||+.|. +++.
T Consensus       229 ~~L~s~--~~~itG~~i~vdGG~  249 (270)
T 1yde_A          229 VFLASE--ANFCTGIELLVTGGA  249 (270)
T ss_dssp             HHHHHH--CTTCCSCEEEESTTT
T ss_pred             HHHccc--CCCcCCCEEEECCCe
Confidence            999864  5799999994 4443

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.95  E-value=8.1e-28  Score=196.03  Aligned_cols=169  Identities=20%  Similarity=0.236  Sum_probs=138.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+.             .++.++++|+++.+++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~v~~   70 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-------------DAARYVHLDVTQPAQWKA   70 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-------------GGEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-------------cCceEEEecCCCHHHHHH
Confidence            4789999999999999999999999999999999999988777665542             247789999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||+...                +|                                      
T Consensus        71 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  150 (260)
T 1nff_A           71 AVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC  150 (260)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCc
Confidence            999999999999999999996420                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..+++.++.+++++||+||+|+||++.|++.. .......     ..|+++  ..+|+|+|+.++++++ 
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~~~~-----~~~~~~--~~~~~dvA~~v~~l~s-  221 (260)
T 1nff_A          151 HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVPEDIF-----QTALGR--AAEPVEVSNLVVYLAS-  221 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSCTTCS-----CCSSSS--CBCHHHHHHHHHHHHS-
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cchhhHH-----hCccCC--CCCHHHHHHHHHHHhC-
Confidence                     788999999999999999999999999999875 2211110     123333  6899999999999974 


Q ss_pred             CCcccccccccccc
Q psy7936         188 EGAAKETGLYYSDY  201 (222)
Q Consensus       188 ~~~~~~~G~~i~~~  201 (222)
                      +...+++|+.+..+
T Consensus       222 ~~~~~~~G~~~~v~  235 (260)
T 1nff_A          222 DESSYSTGAEFVVD  235 (260)
T ss_dssp             GGGTTCCSCEEEES
T ss_pred             ccccCCcCCEEEEC
Confidence            45679999999443

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.95  E-value=6.8e-28  Score=194.84  Aligned_cols=176  Identities=26%  Similarity=0.280  Sum_probs=132.3

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           6 AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      .....++++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.+             ..++.++.+|+++.
T Consensus         6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~   72 (249)
T 3f9i_A            6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-------------KDNYTIEVCNLANK   72 (249)
T ss_dssp             ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------------CSSEEEEECCTTSH
T ss_pred             ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-------------ccCccEEEcCCCCH
Confidence            34456789999999999999999999999999999999999999888776665             23678899999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHHh----------------hh---------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCIL----------------SN---------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------  116 (222)
                      +++.++++++    +++|++|||||+...                +|                                 
T Consensus        73 ~~~~~~~~~~----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  148 (249)
T 3f9i_A           73 EECSNLISKT----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA  148 (249)
T ss_dssp             HHHHHHHHTC----SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--
T ss_pred             HHHHHHHHhc----CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc
Confidence            9998887654    789999999997640                00                                 


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                    +..+++.++.+++++||+||+|+||+++|+|....... .........+.++  ..+|+|+|+.++
T Consensus       149 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~dva~~~~  225 (249)
T 3f9i_A          149 GNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEK-QREAIVQKIPLGT--YGIPEDVAYAVA  225 (249)
T ss_dssp             CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHH-HHHHHHHHCTTCS--CBCHHHHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHH-HHHHHHhcCCCCC--CcCHHHHHHHHH
Confidence                          78899999999999999999999999999998765421 1111112223333  678999999999


Q ss_pred             HHhcCCCccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|++ +...+++|+.+..++
T Consensus       226 ~l~s-~~~~~~tG~~~~vdg  244 (249)
T 3f9i_A          226 FLAS-NNASYITGQTLHVNG  244 (249)
T ss_dssp             HHHS-GGGTTCCSCEEEEST
T ss_pred             HHcC-CccCCccCcEEEECC
Confidence            9964 457899999995443

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.95  E-value=3e-28  Score=194.94  Aligned_cols=162  Identities=17%  Similarity=0.170  Sum_probs=125.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++.+.+             +.++.++.+|+++.++++++++.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~v~~~~~~   68 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-------------SNNVGYRARDLASHQEVEQLFEQ   68 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-------------SSCCCEEECCTTCHHHHHHHHHS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-------------hhccCeEeecCCCHHHHHHHHHH
Confidence            68999999999999999999999999999999998887766543             34678999999999999999888


Q ss_pred             HHhhccceeEEEechhhHH----------------hhh------------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCI----------------LSN------------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~----------------l~~------------------------------------------  116 (222)
                      +.+.   +|++|||||...                -+|                                          
T Consensus        69 ~~~~---~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  145 (230)
T 3guy_A           69 LDSI---PSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCA  145 (230)
T ss_dssp             CSSC---CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             Hhhc---CCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHH
Confidence            7554   399999999653                000                                          


Q ss_pred             ----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccc
Q psy7936         117 ----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAK  192 (222)
Q Consensus       117 ----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~  192 (222)
                          +..+++.++.+++++||+||+|+||+++|+|......         ..+..+  ..+|+|+|+.+++++.++...+
T Consensus       146 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~--~~~~~dvA~~i~~l~~~~~~~~  214 (230)
T 3guy_A          146 VKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK---------SLDTSS--FMSAEDAALMIHGALANIGNGY  214 (230)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------------------------CCCHHHHHHHHHHHCCEETTEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC---------CCCccc--CCCHHHHHHHHHHHHhCcCCCC
Confidence                7899999999999999999999999999999876542         223344  7899999999999988788899


Q ss_pred             ccccccccccc
Q psy7936         193 ETGLYYSDYKV  203 (222)
Q Consensus       193 ~~G~~i~~~~~  203 (222)
                      ++|+.+.....
T Consensus       215 itg~~~~~~~~  225 (230)
T 3guy_A          215 VSDITVNREGH  225 (230)
T ss_dssp             EEEEEEEC---
T ss_pred             ccceeecCCCC
Confidence            99999965544

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.95  E-value=1.1e-27  Score=199.21  Aligned_cols=177  Identities=17%  Similarity=0.155  Sum_probs=139.2

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      |.+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+.++..          +.++.++++|+++.+++
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dv~d~~~v   95 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ----------GFDAHGVVCDVRHLDEM   95 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCceEEEEccCCCHHHH
Confidence            45589999999999999999999999999999999999999999998888763          56899999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH----------------hhh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI----------------LSN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~----------------l~~------------------------------------  116 (222)
                      +++++.+.+.++++|+||||||+..                -+|                                    
T Consensus        96 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  175 (301)
T 3tjr_A           96 VRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN  175 (301)
T ss_dssp             HHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC
Confidence            9999999999999999999999753                000                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---CCcchhhhHHHH----HHHhcCChHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---YFPGARTLGRVL----MWWWMKTPEQG  177 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~p~e~  177 (222)
                                  +..++++++.+++++||+||+|+||+++|+|.......   .+.........+    ......+|+|+
T Consensus       176 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  255 (301)
T 3tjr_A          176 AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDV  255 (301)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHH
Confidence                        78899999999999999999999999999997642110   000000000000    01126799999


Q ss_pred             HHHHHHHhcCCCcccccc
Q psy7936         178 AQTTLHCALDEGAAKETG  195 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G  195 (222)
                      |+.++.++..+....+.|
T Consensus       256 A~~i~~~l~~~~~~i~~g  273 (301)
T 3tjr_A          256 ARLTADAILANRLYILPH  273 (301)
T ss_dssp             HHHHHHHHHHTCSEECCC
T ss_pred             HHHHHHHHhcCCeEEecC
Confidence            999999987665444444

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.95  E-value=2.8e-27  Score=194.07  Aligned_cols=179  Identities=18%  Similarity=0.104  Sum_probs=139.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh---
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF---   85 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~---   85 (222)
                      ..|++|++|||||++|||+++++.|+++|++|++++| +.+.++++.+.++..         .+.++.++++|+++.   
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~~~~~~   77 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA---------RAGSAVLCKGDLSLSSSL   77 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---------STTCEEEEECCCSSSTTH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh---------cCCceEEEeccCCCcccc
Confidence            3468999999999999999999999999999999999 988888888887654         245788999999999   


Q ss_pred             -hhHHHHHHHHHhhccceeEEEechhhH---------------------H-----------------------hh-----
Q psy7936          86 -KSIRDCAQDINQTEANVHILINNAVYC---------------------I-----------------------LS-----  115 (222)
Q Consensus        86 -~~v~~~~~~i~~~~~~id~li~~ag~~---------------------~-----------------------l~-----  115 (222)
                       ++++++++.+.+.++++|+||||||+.                     .                       +.     
T Consensus        78 ~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  157 (276)
T 1mxh_A           78 LDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAW  157 (276)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC------
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCC
Confidence             999999999999999999999999852                     1                       00     


Q ss_pred             ----h--------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHH
Q psy7936         116 ----N--------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRV  165 (222)
Q Consensus       116 ----~--------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  165 (222)
                          .                          +..+++.++.+++++||+||+|+||+++|+  ....+ ..........|
T Consensus       158 ~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~~~-~~~~~~~~~~p  234 (276)
T 1mxh_A          158 RSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQ-ETQEEYRRKVP  234 (276)
T ss_dssp             -CCCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSSCH-HHHHHHHTTCT
T ss_pred             CCCCcEEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccCCH-HHHHHHHhcCC
Confidence                1                          788999999999999999999999999999  22211 11011101112


Q ss_pred             HHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         166 LMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       166 ~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +++. ..+|+|+|+.++||++ +...+++|++|..++
T Consensus       235 ~~r~-~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdg  269 (276)
T 1mxh_A          235 LGQS-EASAAQIADAIAFLVS-KDAGYITGTTLKVDG  269 (276)
T ss_dssp             TTSC-CBCHHHHHHHHHHHHS-GGGTTCCSCEEEEST
T ss_pred             CCCC-CCCHHHHHHHHHHHhC-ccccCccCcEEEECC
Confidence            2210 5699999999999974 456799999995443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.95  E-value=1.3e-27  Score=197.13  Aligned_cols=181  Identities=22%  Similarity=0.219  Sum_probs=141.8

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ....+++|++|||||++|||+++++.|++.|++|++++|+.+.++++.+.++..          +.++.++.+|+++.++
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~d~~~  107 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF----------GYESSGYAGDVSKKEE  107 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT----------TCCEEEEECCTTCHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc----------CCceeEEECCCCCHHH
Confidence            345678999999999999999999999999999999999998888888777652          5578899999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      ++++++.+.+.++++|++|||||....                +|                                   
T Consensus       108 v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  187 (285)
T 2c07_A          108 ISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN  187 (285)
T ss_dssp             HHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC
Confidence            999999999999999999999986420                00                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..+++.++.++++.||+||+|+||+++|++.....+. .........|.++  ..+|+|+|+.++++
T Consensus       188 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~dvA~~~~~l  264 (285)
T 2c07_A          188 VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ-IKKNIISNIPAGR--MGTPEEVANLACFL  264 (285)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH-HHHHHHTTCTTSS--CBCHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHH-HHHHHHhhCCCCC--CCCHHHHHHHHHHH
Confidence                        67799999999999999999999999999987653211 0000001122333  67999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      +. +...+++|+.+..++
T Consensus       265 ~~-~~~~~~~G~~i~v~g  281 (285)
T 2c07_A          265 SS-DKSGYINGRVFVIDG  281 (285)
T ss_dssp             HS-GGGTTCCSCEEEEST
T ss_pred             hC-CCcCCCCCCEEEeCC
Confidence            74 456789999995443

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=9e-27  Score=193.39  Aligned_cols=190  Identities=18%  Similarity=0.245  Sum_probs=147.6

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           5 KAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         5 ~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      +......|++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.....     ...+.++.++++|+++
T Consensus         9 ~~~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~D~~~   83 (303)
T 1yxm_A            9 SYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP-----PTKQARVIPIQCNIRN   83 (303)
T ss_dssp             CSBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSC-----TTCCCCEEEEECCTTC
T ss_pred             CccCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcc-----ccCCccEEEEecCCCC
Confidence            33444568899999999999999999999999999999999999988888888765210     0024578999999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------  116 (222)
                      .++++++++.+.+.++++|++|||||...                -+|                                
T Consensus        84 ~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~  163 (303)
T 1yxm_A           84 EEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA  163 (303)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeeccc
Confidence            99999999999999999999999999432                000                                


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCC-CCCC--CCCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGR-YMDD--TYFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                    +..+++.++.++.++||+||+|+||++.|++.. ....  ...........|.++  ..+|+|+|+
T Consensus       164 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~dvA~  241 (303)
T 1yxm_A          164 GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKR--IGVPEEVSS  241 (303)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSS--CBCTHHHHH
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccC--CCCHHHHHH
Confidence                          688999999999999999999999999999532 1111  111111112234444  689999999


Q ss_pred             HHHHHhcCCCccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .+++++ ++...+++|+++..++
T Consensus       242 ~i~~l~-~~~~~~~~G~~~~v~g  263 (303)
T 1yxm_A          242 VVCFLL-SPAASFITGQSVDVDG  263 (303)
T ss_dssp             HHHHHH-SGGGTTCCSCEEEEST
T ss_pred             HHHHHh-CcccccCCCcEEEECC
Confidence            999997 4456799999995433

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.95  E-value=8.7e-28  Score=195.48  Aligned_cols=182  Identities=23%  Similarity=0.207  Sum_probs=143.1

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ...+.|++|++|||||++|||++++++|+++|++|++++|+.+...+..+.+....         +.++.++++|+++.+
T Consensus         7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------~~~~~~~~~Dl~~~~   77 (265)
T 1h5q_A            7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF---------GVKTKAYQCDVSNTD   77 (265)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH---------TCCEEEEECCTTCHH
T ss_pred             CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc---------CCeeEEEEeeCCCHH
Confidence            34456889999999999999999999999999999999998776666666665432         457889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH----------------hhh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI----------------LSN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~----------------------------------  116 (222)
                      +++++++.+.+.++++|++|||||...                -+|                                  
T Consensus        78 ~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~  157 (265)
T 1h5q_A           78 IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQI  157 (265)
T ss_dssp             HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhc
Confidence            999999999999999999999998642                000                                  


Q ss_pred             ---------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChH
Q psy7936         117 ---------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 ---------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  175 (222)
                                           +..+++.++.+++++||+||+|+||+++|++.....+. .........|+++  +.+|+
T Consensus       158 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~  234 (265)
T 1h5q_A          158 INQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK-IRDHQASNIPLNR--FAQPE  234 (265)
T ss_dssp             CCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH-HHHHHHHTCTTSS--CBCGG
T ss_pred             cccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchh-HHHHHHhcCcccC--CCCHH
Confidence                                 56788899999998999999999999999997754211 1111101123333  67999


Q ss_pred             HHHHHHHHHhcCCCcccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      |+|+.+++++++ ...+++|+.+..+
T Consensus       235 dva~~~~~l~~~-~~~~~~G~~~~v~  259 (265)
T 1h5q_A          235 EMTGQAILLLSD-HATYMTGGEYFID  259 (265)
T ss_dssp             GGHHHHHHHHSG-GGTTCCSCEEEEC
T ss_pred             HHHHHHHhhccC-chhcCcCcEEEec
Confidence            999999999754 5678999998443

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.95  E-value=1e-27  Score=194.04  Aligned_cols=181  Identities=24%  Similarity=0.250  Sum_probs=144.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++|++|++|||||++|||+++++.|++.|++|++++|+.+.++++.++++..          +.++.++.+|+++.+++
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~   75 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL----------GGQAFACRCDITSEQEL   75 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh----------CCceEEEEcCCCCHHHH
Confidence            45688999999999999999999999999999999999999888888777653          45788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh---------------hh-------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL---------------SN-------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l---------------~~-------------------------------------  116 (222)
                      +++++.+.+.++++|++|||||....               +|                                     
T Consensus        76 ~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  155 (255)
T 1fmc_A           76 SALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN  155 (255)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC
Confidence            99999999999999999999986420               00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..+++.++.+++++||++|+|.||++.|++.................|+.+  +.+|+|+|+.+++++.
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l~~  233 (255)
T 1fmc_A          156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRR--LGQPQDIANAALFLCS  233 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCS--CBCHHHHHHHHHHHHS
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCccc--CCCHHHHHHHHHHHhC
Confidence                      6788999999999999999999999999998764321111111111123333  6799999999999974


Q ss_pred             CCCccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYK  202 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~  202 (222)
                       +...+++|+.+..++
T Consensus       234 -~~~~~~~G~~~~v~g  248 (255)
T 1fmc_A          234 -PAASWVSGQILTVSG  248 (255)
T ss_dssp             -GGGTTCCSCEEEEST
T ss_pred             -CccccCCCcEEEECC
Confidence             446689999885443

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.95  E-value=3.3e-28  Score=198.80  Aligned_cols=180  Identities=21%  Similarity=0.171  Sum_probs=139.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ++.+|++|++|||||++|||+++++.|++.|++|++++|+.+.                     +.++.++++|+++.++
T Consensus         2 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---------------------~~~~~~~~~Dl~~~~~   60 (264)
T 2dtx_A            2 GFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG---------------------EAKYDHIECDVTNPDQ   60 (264)
T ss_dssp             CCGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC---------------------SCSSEEEECCTTCHHH
T ss_pred             CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc---------------------CCceEEEEecCCCHHH
Confidence            3456789999999999999999999999999999999998753                     2256789999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      ++++++.+.+.++++|+||||||+...                +|                                   
T Consensus        61 v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  140 (264)
T 2dtx_A           61 VKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT  140 (264)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC
Confidence            999999999999999999999996430                00                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC------CC----CCcchhhhHHHHHHHhcCCh
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD------DT----YFPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~p  174 (222)
                                  +..+++.++.++++. |+||+|+||+++|+|.....      ..    ..........|+++  +.+|
T Consensus       141 ~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~p  217 (264)
T 2dtx_A          141 KNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQR--IGKP  217 (264)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSS--CBCH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCC--CcCH
Confidence                        788999999999988 99999999999999865421      00    00001001123333  6799


Q ss_pred             HHHHHHHHHHhcCCCccccccccc-ccccccccCCCccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYY-SDYKVAKSRNFPFE  212 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i-~~~~~~~~~~~~~~  212 (222)
                      +|+|+.++||++ +...+++|+.+ .+++.....+...+
T Consensus       218 ~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~~~~p~~~~  255 (264)
T 2dtx_A          218 QEVASAVAFLAS-REASFITGTCLYVDGGLSIRAPISTP  255 (264)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCCCCCCC
T ss_pred             HHHHHHHHHHhC-chhcCCCCcEEEECCCcccCCCCCCc
Confidence            999999999974 45679999999 45555554444443

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.95  E-value=3.3e-27  Score=191.21  Aligned_cols=171  Identities=22%  Similarity=0.153  Sum_probs=124.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++|++|++|||||++|||+++++.|+++|++|++++|+.+.         .          .. .+.++.+|+++.++++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~----------~~-~~~~~~~D~~d~~~~~   62 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------E----------QY-PFATEVMDVADAAQVA   62 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------S----------CC-SSEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------h----------cC-CceEEEcCCCCHHHHH
Confidence            35789999999999999999999999999999999998751         1          11 2678899999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----------------hhh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----------------LSN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----------------l~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+..                -+|                                     
T Consensus        63 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  142 (250)
T 2fwm_X           63 QVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIG  142 (250)
T ss_dssp             HHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC
Confidence            999999999999999999999642                000                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC-CCCcc-hhhh-------HHHHHHHhcCChHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD-TYFPG-ARTL-------GRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~-~~~~-------~~~~~~~~~~~p~e~  177 (222)
                                +..+++.++.+++++||+||+|+||+++|+|...... ..... ....       ..|+++  ..+|+|+
T Consensus       143 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~p~dv  220 (250)
T 2fwm_X          143 MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGK--IARPQEI  220 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCC--CcCHHHH
Confidence                      7889999999999999999999999999999764321 11111 1111       345555  7899999


Q ss_pred             HHHHHHHhcCCCcccccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+.++||+++ ...+++|+.+..++.
T Consensus       221 A~~v~~l~s~-~~~~~tG~~i~vdGG  245 (250)
T 2fwm_X          221 ANTILFLASD-LASHITLQDIVVDGG  245 (250)
T ss_dssp             HHHHHHHHSG-GGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCc-cccCCCCCEEEECCC
Confidence            9999999754 567999999954443

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.95  E-value=7.5e-27  Score=193.71  Aligned_cols=182  Identities=20%  Similarity=0.179  Sum_probs=142.6

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+..+|++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+....         +.++.++++|+++.+
T Consensus        19 ~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------~~~~~~~~~Dl~~~~   89 (302)
T 1w6u_A           19 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT---------GNKVHAIQCDVRDPD   89 (302)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---------SSCEEEEECCTTCHH
T ss_pred             CCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc---------CCceEEEEeCCCCHH
Confidence            34456899999999999999999999999999999999999998888888876542         457899999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH---------------------------------hh-h----------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI---------------------------------LS-N----------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~---------------------------------l~-~----------------  116 (222)
                      +++++++.+.+.++++|++|||||...                                 +. .                
T Consensus        90 ~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~  169 (302)
T 1w6u_A           90 MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET  169 (302)
T ss_dssp             HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc
Confidence            999999999999999999999999532                                 00 0                


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCC-cCCCCCCCCCc-chhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTE-LGRYMDDTYFP-GARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                    +..+++.++.+++++||+|++|+||++.|+ +.......... .......|.++  ..+|+|+|+.
T Consensus       170 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~dva~~  247 (302)
T 1w6u_A          170 GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGR--LGTVEELANL  247 (302)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSS--CBCHHHHHHH
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCC--CCCHHHHHHH
Confidence                          688899999999999999999999999998 54433221111 01111223333  6799999999


Q ss_pred             HHHHhcCCCccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSD  200 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~  200 (222)
                      +++++. +...+++|+.+..
T Consensus       248 ~~~l~~-~~~~~~~G~~~~v  266 (302)
T 1w6u_A          248 AAFLCS-DYASWINGAVIKF  266 (302)
T ss_dssp             HHHHTS-GGGTTCCSCEEEE
T ss_pred             HHHHcC-CcccccCCCEEEE
Confidence            999964 4567899998843

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.95  E-value=1.2e-27  Score=194.44  Aligned_cols=182  Identities=25%  Similarity=0.256  Sum_probs=144.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++++|++|||||++|||++++++|+++|++|++++| +.+.++++.+.+...          +.++.++.+|+++.+++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~~~   72 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV----------GGEAIAVKGDVTVESDV   72 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCEEEEEECCTTSHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc----------CCceEEEECCCCCHHHH
Confidence            3478999999999999999999999999999999999 888888887777653          55889999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      .++++++.+.++++|+||||||....                +|                                    
T Consensus        73 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~  152 (261)
T 1gee_A           73 INLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW  152 (261)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC
Confidence            99999999999999999999986420                00                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..+++.++.+++++||+||+|+||++.|+|....... ..........|+++  ..+|+|+|+.+++
T Consensus       153 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~  230 (261)
T 1gee_A          153 PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGY--IGEPEEIAAVAAW  230 (261)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSS--CBCHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                        67888999999998999999999999999987543110 00001001112333  6799999999999


Q ss_pred             HhcCCCcccccccccc-ccccc
Q psy7936         184 CALDEGAAKETGLYYS-DYKVA  204 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~-~~~~~  204 (222)
                      +++ +...+++|+++. +++..
T Consensus       231 l~~-~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          231 LAS-SEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHS-GGGTTCCSCEEEESTTGG
T ss_pred             HhC-ccccCCCCcEEEEcCCcc
Confidence            974 456799999995 44433

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.95  E-value=4.6e-27  Score=192.97  Aligned_cols=181  Identities=15%  Similarity=0.098  Sum_probs=144.3

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ++++++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+...          +.++.++++|+++.+
T Consensus        27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~   96 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY----------GVHSKAYKCNISDPK   96 (279)
T ss_dssp             GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH----------CSCEEEEECCTTCHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------CCcceEEEeecCCHH
Confidence            3446789999999999999999999999999999999999988777777666543          457889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh------------------hh--------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL------------------SN--------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l------------------~~--------------------------------  116 (222)
                      +++++++.+.+.++++|++|||||....                  +|                                
T Consensus        97 ~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~  176 (279)
T 3ctm_A           97 SVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGK  176 (279)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTS
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhc
Confidence            9999999999999999999999986421                  00                                


Q ss_pred             -----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 -----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 -----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                       +..+++.++.+++++| +||+|+||+++|+|...... ..........|+++  +.+|+|+|+
T Consensus       177 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~p~~~--~~~~~dvA~  252 (279)
T 3ctm_A          177 IVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASK-DMKAKWWQLTPLGR--EGLTQELVG  252 (279)
T ss_dssp             CC---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCH-HHHHHHHHHSTTCS--CBCGGGTHH
T ss_pred             cCCCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccCh-HHHHHHHHhCCccC--CcCHHHHHH
Confidence                             6789999999999999 99999999999999853221 11111101123333  679999999


Q ss_pred             HHHHHhcCCCccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .++++++ +...+++|+.+..++
T Consensus       253 ~~~~l~s-~~~~~~tG~~i~vdg  274 (279)
T 3ctm_A          253 GYLYLAS-NASTFTTGSDVVIDG  274 (279)
T ss_dssp             HHHHHHS-GGGTTCCSCEEEEST
T ss_pred             HHHHHhC-ccccCccCCEEEECC
Confidence            9999974 456799999995443

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.95  E-value=2e-27  Score=192.29  Aligned_cols=179  Identities=25%  Similarity=0.255  Sum_probs=140.2

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeE-EEEecCCCCh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEV-LIKKLDLASF   85 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~D~~~~   85 (222)
                      .+++++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+.             .++ .++.+|+++.
T Consensus         4 ~~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~   70 (254)
T 2wsb_A            4 RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG-------------AAVAARIVADVTDA   70 (254)
T ss_dssp             TTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-------------GGEEEEEECCTTCH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-------------ccceeEEEEecCCH
Confidence            34567899999999999999999999999999999999999988777766551             245 7899999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHHh----------------hh---------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCIL----------------SN---------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------  116 (222)
                      ++++++++.+.+ ++++|++|||||....                +|                                 
T Consensus        71 ~~~~~~~~~~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  149 (254)
T 2wsb_A           71 EAMTAAAAEAEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTI  149 (254)
T ss_dssp             HHHHHHHHHHHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhcc
Confidence            999999999888 8899999999986430                00                                 


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                      +..+++.++.+++++||++++|+||++.|++....... ..........|.++  ..+|+|+|+
T Consensus       150 ~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~  227 (254)
T 2wsb_A          150 VNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGR--CGEPSEIAA  227 (254)
T ss_dssp             CCSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSS--CBCHHHHHH
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCC--CCCHHHHHH
Confidence                            67888899999988999999999999999987543211 11111101122233  679999999


Q ss_pred             HHHHHhcCCCccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .+++++. +...+++|+.+..++
T Consensus       228 ~~~~l~~-~~~~~~~G~~~~v~g  249 (254)
T 2wsb_A          228 AALFLAS-PAASYVTGAILAVDG  249 (254)
T ss_dssp             HHHHHHS-GGGTTCCSCEEEEST
T ss_pred             HHHHHhC-cccccccCCEEEECC
Confidence            9999974 456789999995443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.94  E-value=4.4e-27  Score=193.04  Aligned_cols=176  Identities=21%  Similarity=0.217  Sum_probs=131.2

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..+|+ |++|||||++|||+++++.|++.|++|++++|+.+.++++.+.+..           ..++.++++|+++.+++
T Consensus        17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~Dv~d~~~v   84 (272)
T 2nwq_A           17 GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA-----------KTRVLPLTLDVRDRAAM   84 (272)
T ss_dssp             ----C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT-----------TSCEEEEECCTTCHHHH
T ss_pred             CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-----------CCcEEEEEcCCCCHHHH
Confidence            35567 9999999999999999999999999999999999888887766632           24788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh-----------------hh-----------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL-----------------SN-----------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l-----------------~~-----------------------------------  116 (222)
                      +++++.+.+.++++|+||||||+...                 +|                                   
T Consensus        85 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~  164 (272)
T 2nwq_A           85 SAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP  164 (272)
T ss_dssp             HHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC
Confidence            99999999999999999999986320                 00                                   


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..+++.++.|++++||+||+|+||+++|+|......... ..  .........+.+|+|+|+.++|
T Consensus       165 ~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~-~~--~~~~~~~~~~~~pedvA~~v~~  241 (272)
T 2nwq_A          165 YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ-AR--YDKTYAGAHPIQPEDIAETIFW  241 (272)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------CCCCBCHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch-HH--HHHhhccCCCCCHHHHHHHHHH
Confidence                         7899999999999999999999999999999753211000 00  0000000114799999999999


Q ss_pred             HhcCCCcccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDY  201 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~  201 (222)
                      |+++  ..+++|+.+..+
T Consensus       242 l~s~--~~~~~g~~i~v~  257 (272)
T 2nwq_A          242 IMNQ--PAHLNINSLEIM  257 (272)
T ss_dssp             HHTS--CTTEEEEEEEEE
T ss_pred             HhCC--CccCccceEEEe
Confidence            9764  368899988443

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.94  E-value=2.2e-27  Score=190.98  Aligned_cols=176  Identities=22%  Similarity=0.233  Sum_probs=142.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEE-EeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIM-ACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ||+++||||++|||++++++|+++|++|++ .+|+.+..+++.+.++..          +.++.++++|+++.+++++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~   70 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY----------GGQAITFGGDVSKEADVEAMM   70 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------TCEEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----------CCcEEEEeCCCCCHHHHHHHH
Confidence            589999999999999999999999999998 489988888887777653          458899999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHH----------------hhh----------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCI----------------LSN----------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~----------------l~~----------------------------------------  116 (222)
                      +.+.+.++++|++|||||...                -+|                                        
T Consensus        71 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  150 (244)
T 1edo_A           71 KTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQAN  150 (244)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCcc
Confidence            999999999999999998643                000                                        


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                             +..+++.++.++.++||+||+|+||+++|+|....... .........|+++  ..+|+|+|+.+.+++.++.
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~dva~~~~~l~~~~~  227 (244)
T 1edo_A          151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED-MEKKILGTIPLGR--TGQPENVAGLVEFLALSPA  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH-HHHHHHTSCTTCS--CBCHHHHHHHHHHHHHCSG
T ss_pred             chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChH-HHHHHhhcCCCCC--CCCHHHHHHHHHHHhCCCc
Confidence                   67889999999999999999999999999987654311 0000001112333  6799999999999986777


Q ss_pred             ccccccccccccc
Q psy7936         190 AAKETGLYYSDYK  202 (222)
Q Consensus       190 ~~~~~G~~i~~~~  202 (222)
                      ..+++|+.+..++
T Consensus       228 ~~~~~G~~~~v~g  240 (244)
T 1edo_A          228 ASYITGQAFTIDG  240 (244)
T ss_dssp             GGGCCSCEEEEST
T ss_pred             cCCcCCCEEEeCC
Confidence            7899999985443

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.94  E-value=5.1e-27  Score=205.34  Aligned_cols=177  Identities=22%  Similarity=0.199  Sum_probs=132.3

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ...+++|++|||||++|||+++|+.|+++|++|++++|+... +++.+.....            .+.++.||+++.+++
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~------------~~~~~~~Dvtd~~~v  274 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV------------GGTALTLDVTADDAV  274 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH------------TCEEEECCTTSTTHH
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc------------CCeEEEEecCCHHHH
Confidence            345789999999999999999999999999999999997532 2222222221            235789999999999


Q ss_pred             HHHHHHHHhhccc-eeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          89 RDCAQDINQTEAN-VHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~-id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      +++++.+.+.+++ +|++|||||+...                +|                                   
T Consensus       275 ~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~  354 (454)
T 3u0b_A          275 DKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN  354 (454)
T ss_dssp             HHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC
Confidence            9999999999875 9999999998640                00                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..|+++++.+++++||+||+|+||+++|+|......... .......++.+  ..+|+|+|+.+.||
T Consensus       355 ~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~l~r--~g~pedvA~~v~fL  431 (454)
T 3u0b_A          355 RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATR-EVGRRLNSLFQ--GGQPVDVAELIAYF  431 (454)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------C-HHHHHSBTTSS--CBCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhH-HHHHhhccccC--CCCHHHHHHHHHHH
Confidence                        7889999999999999999999999999999876543211 11111223334  67999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      + ++...++||+.|..++
T Consensus       432 ~-s~~a~~itG~~i~vdG  448 (454)
T 3u0b_A          432 A-SPASNAVTGNTIRVCG  448 (454)
T ss_dssp             H-CGGGTTCCSCEEEESS
T ss_pred             h-CCccCCCCCcEEEECC
Confidence            7 5567899999995444

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.94  E-value=3.3e-27  Score=202.56  Aligned_cols=171  Identities=10%  Similarity=-0.076  Sum_probs=137.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHh-CCCEEEEEeCChhHHH------------HHHHHHHHhhhhhcccCCCCCeEEEEe
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYG-IGAKVIMACRDVEKAE------------TTASEIRKHFEVATSEDKKPGEVLIKK   79 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~-~g~~v~~~~r~~~~~~------------~~~~~i~~~~~~~~~~~~~~~~~~~~~   79 (222)
                      .+|++|||||++|||+++|+.|++ .|++|++++|+.+.++            .+.+.++.          .+.++..+.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~----------~G~~a~~i~  129 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA----------AGLYSKSIN  129 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH----------TTCCEEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh----------cCCcEEEEE
Confidence            489999999999999999999999 9999999999865432            23344444          366889999


Q ss_pred             cCCCChhhHHHHHHHHHhhc-cceeEEEechhhH----------------------------------------H-----
Q psy7936          80 LDLASFKSIRDCAQDINQTE-ANVHILINNAVYC----------------------------------------I-----  113 (222)
Q Consensus        80 ~D~~~~~~v~~~~~~i~~~~-~~id~li~~ag~~----------------------------------------~-----  113 (222)
                      +|+++.++++++++.+.+.+ |++|+||||||..                                        .     
T Consensus       130 ~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~  209 (422)
T 3s8m_A          130 GDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQE  209 (422)
T ss_dssp             SCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHH
T ss_pred             ecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHH
Confidence            99999999999999999999 9999999999861                                        0     


Q ss_pred             ---------------hhh----------------------------------------HHHHHHHHHhhcCCCCeEEEEE
Q psy7936         114 ---------------LSN----------------------------------------NILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus       114 ---------------l~~----------------------------------------~~~~~~~la~~~~~~gI~v~~v  138 (222)
                                     +..                                        +..++++|+.|++++|||||+|
T Consensus       210 ~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaV  289 (422)
T 3s8m_A          210 IEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVA  289 (422)
T ss_dssp             HHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             HHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEE
Confidence                           000                                        7899999999999999999999


Q ss_pred             eCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccccc-cccc
Q psy7936         139 HPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKET-GLYY  198 (222)
Q Consensus       139 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~-G~~i  198 (222)
                      +||+++|+|....+..+..... ...++++  ..+|||+|+.+.||+++..  |.+ |+..
T Consensus       290 aPG~i~T~~~~~ip~~~~~~~~-~~~~m~r--~G~pEdva~~v~~L~sd~l--y~~~~~~~  345 (422)
T 3s8m_A          290 VLKSVVTQASAAIPVMPLYISM-VYKIMKE--KGLHEGTIEQLDRLFRERL--YRQDGQPA  345 (422)
T ss_dssp             EECCCCCTTGGGSTHHHHHHHH-HHHHHHH--TTCCCCHHHHHHHHHHHTT--TCTTCCCC
T ss_pred             EcCCCcChhhhcCCCChHHHHH-HHhhhcC--CcChHHHHHHHHHHhcchh--hccCCCCc
Confidence            9999999998876432211111 3457777  8999999999999986643  543 5544

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.94  E-value=8.3e-27  Score=189.79  Aligned_cols=174  Identities=16%  Similarity=0.152  Sum_probs=135.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+++             +.++.++++|+++.++++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~v~   74 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-------------GNNCVFAPADVTSEKDVQ   74 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-------------CTTEEEEECCTTCHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-------------CCceEEEEcCCCCHHHHH
Confidence            4578999999999999999999999999999999999988777666554             336889999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhH--------------H-------------------------h---------hh-----
Q psy7936          90 DCAQDINQTEANVHILINNAVYC--------------I-------------------------L---------SN-----  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~--------------~-------------------------l---------~~-----  116 (222)
                      ++++.+.+.++++|+||||||..              .                         +         ..     
T Consensus        75 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~  154 (265)
T 2o23_A           75 TALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN  154 (265)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEE
T ss_pred             HHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEE
Confidence            99999999999999999999853              0                         0         00     


Q ss_pred             ----------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHH-HHHhcCC
Q psy7936         117 ----------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVL-MWWWMKT  173 (222)
Q Consensus       117 ----------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  173 (222)
                                            +..+++.++.+++++||+||+|+||+++|+|....... .........|+ ++  +.+
T Consensus       155 isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~--~~~  231 (265)
T 2o23_A          155 TASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-VCNFLASQVPFPSR--LGD  231 (265)
T ss_dssp             ECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCSSSCS--CBC
T ss_pred             eCChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH-HHHHHHHcCCCcCC--CCC
Confidence                                  67889999999999999999999999999997754321 11111111222 33  679


Q ss_pred             hHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         174 PEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       174 p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+|+|+.+++++.   ..+++|+.+..++
T Consensus       232 ~~dva~~~~~l~~---~~~~~G~~i~vdg  257 (265)
T 2o23_A          232 PAEYAHLVQAIIE---NPFLNGEVIRLDG  257 (265)
T ss_dssp             HHHHHHHHHHHHH---CTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhh---cCccCceEEEECC
Confidence            9999999999974   3589999995443

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.94  E-value=2.3e-26  Score=192.79  Aligned_cols=183  Identities=19%  Similarity=0.169  Sum_probs=135.2

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +|.++++|++|||||++|||++++++|++.|++|++++|+.+.++++.+.+....        .+.++.++.+|+++.++
T Consensus         2 ~m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~Dl~~~~~   73 (319)
T 3ioy_A            2 SLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG--------SGPEVMGVQLDVASREG   73 (319)
T ss_dssp             -CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--------CGGGEEEEECCTTCHHH
T ss_pred             CccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--------CCCeEEEEECCCCCHHH
Confidence            4567889999999999999999999999999999999999999999988887642        23489999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH---------------------------------h--h-------h---------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI---------------------------------L--S-------N---------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~---------------------------------l--~-------~---------  116 (222)
                      +.++++.+.+.++++|+||||||+..                                 +  .       .         
T Consensus        74 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~  153 (319)
T 3ioy_A           74 FKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASM  153 (319)
T ss_dssp             HHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCG
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccc
Confidence            99999999999999999999999642                                 0  0       0         


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc--chhh--hHHHHHH-----H
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP--GART--LGRVLMW-----W  169 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~~~--~~~~~~~-----~  169 (222)
                                        +..|++.++.++.++||+|++|+||+|+|+|..........  ....  .......     .
T Consensus       154 a~~~~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (319)
T 3ioy_A          154 AAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHE  233 (319)
T ss_dssp             GGTCCCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGG
T ss_pred             ccccCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhh
Confidence                              77899999999999999999999999999998754321100  0000  0000000     0


Q ss_pred             hcCChHHHHHHHHHHhcCCCccccccccc
Q psy7936         170 WMKTPEQGAQTTLHCALDEGAAKETGLYY  198 (222)
Q Consensus       170 ~~~~p~e~a~~i~~l~~~~~~~~~~G~~i  198 (222)
                      ...+|+++|+.++.++..+.....++..+
T Consensus       234 ~~~~pe~vA~~~~~al~~~~~~i~~~~~~  262 (319)
T 3ioy_A          234 FGMEPDVIGARVIEAMKANRLHIFSHPDH  262 (319)
T ss_dssp             SSBCHHHHHHHHHHHHHTTCSEECCCSTT
T ss_pred             cCCCHHHHHHHHHHHHHcCCCEEEcCHHH
Confidence            12799999999999987765444444433

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.94  E-value=4.4e-27  Score=189.84  Aligned_cols=177  Identities=19%  Similarity=0.190  Sum_probs=139.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+...         .+.++.++++|+++.++++++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~   72 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA---------YADKVLRVRADVADEGDVNAAIA   72 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTT---------TGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---------cCCcEEEEEecCCCHHHHHHHHH
Confidence            689999999999999999999999999999999998888777666221         24578899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHH-------------------hhh--------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCI-------------------LSN--------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~-------------------l~~--------------------------------------  116 (222)
                      ++.+.++++|++|||||...                   -+|                                      
T Consensus        73 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  152 (250)
T 2cfc_A           73 ATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGR  152 (250)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCc
Confidence            99999999999999998521                   000                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCC-CCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRY-MDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                               +..+++.++.+++++||+|++|+||++.|++... .....+........|+++  ..+|+|+|+.+++++.
T Consensus       153 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l~~  230 (250)
T 2cfc_A          153 SAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKE--IGTAAQVADAVMFLAG  230 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCS--CBCHHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHHcC
Confidence                     7889999999999899999999999999998764 211111111111123333  6799999999999975


Q ss_pred             CCCccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYK  202 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~  202 (222)
                      + ...+++|+.+..++
T Consensus       231 ~-~~~~~~G~~~~v~g  245 (250)
T 2cfc_A          231 E-DATYVNGAALVMDG  245 (250)
T ss_dssp             T-TCTTCCSCEEEEST
T ss_pred             c-hhhcccCCEEEECC
Confidence            4 56789999995443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.94  E-value=6.4e-27  Score=190.34  Aligned_cols=185  Identities=18%  Similarity=0.161  Sum_probs=137.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+.++....   ....+..++.++++|+++.+++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGS---KEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC---------------CCEEEECCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCc---cccccCcceEEEEecCCCHHHHHH
Confidence            47899999999999999999999999999999999999888777665543210   000012578899999999999999


Q ss_pred             HHHHHHhhccce-eEEEechhhHH----------------hhh-------------------------------------
Q psy7936          91 CAQDINQTEANV-HILINNAVYCI----------------LSN-------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~i-d~li~~ag~~~----------------l~~-------------------------------------  116 (222)
                      +++.+.+.++++ |++|||||...                -+|                                     
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV  160 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC
Confidence            999999999999 99999998642                000                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                                 +..+++.++.+++++||+|++|+||++.|++....... .........|+.+  +.+|+|+|+.+++++
T Consensus       161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~dva~~~~~l~  237 (264)
T 2pd6_A          161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQK-VVDKITEMIPMGH--LGDPEDVADVVAFLA  237 (264)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CTGGGCTTCS--CBCHHHHHHHHHHHH
T ss_pred             CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHH-HHHHHHHhCCCCC--CCCHHHHHHHHHHHc
Confidence                       67789999999999999999999999999987654321 1111112223333  679999999999997


Q ss_pred             cCCCccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYK  202 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~  202 (222)
                      .+ ...+++|+.+..++
T Consensus       238 ~~-~~~~~~G~~~~v~g  253 (264)
T 2pd6_A          238 SE-DSGYITGTSVEVTG  253 (264)
T ss_dssp             SG-GGTTCCSCEEEEST
T ss_pred             CC-cccCCCCCEEEECC
Confidence            54 46789999995443

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.94  E-value=1.4e-26  Score=187.42  Aligned_cols=169  Identities=22%  Similarity=0.249  Sum_probs=128.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |+++||||++|||+++++.|+++|++|++++|+.+.++++.+++             +.++.++.+|+++.++++++++.
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~   67 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-------------GDNLYIAQLDVRNRAAIEEMLAS   67 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------------CTTEEEEECCTTCHHHHHHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------------cCceEEEEcCCCCHHHHHHHHHH
Confidence            68999999999999999999999999999999998887766554             23678899999999999999999


Q ss_pred             HHhhccceeEEEechhhHH----h-------------hh-----------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCI----L-------------SN-----------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~----l-------------~~-----------------------------------------  116 (222)
                      +.+.++++|+||||||+..    +             +|                                         
T Consensus        68 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  147 (248)
T 3asu_A           68 LPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVY  147 (248)
T ss_dssp             SCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchH
Confidence            9999999999999999641    0             00                                         


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCccc-CCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVK-TELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                            +..++++++.|++++||+||+|+||+++ |+|......... ..  .........+.+|+|+|+.++||++++ 
T Consensus       148 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~-~~--~~~~~~~~~~~~p~dvA~~v~~l~s~~-  223 (248)
T 3asu_A          148 GATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD-GK--AEKTYQNTVALTPEDVSEAVWWVSTLP-  223 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------CCBCHHHHHHHHHHHHHSC-
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCch-HH--HHHHHhccCCCCHHHHHHHHHHHhcCC-
Confidence                  7899999999999999999999999999 998653211000 00  000001112579999999999998653 


Q ss_pred             cccccccccccc
Q psy7936         190 AAKETGLYYSDY  201 (222)
Q Consensus       190 ~~~~~G~~i~~~  201 (222)
                       .+++|+.+...
T Consensus       224 -~~~~g~~i~v~  234 (248)
T 3asu_A          224 -AHVNINTLEMM  234 (248)
T ss_dssp             -TTCCCCEEEEC
T ss_pred             -ccceeeEEEEc
Confidence             68899988543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.94  E-value=3.3e-27  Score=198.67  Aligned_cols=189  Identities=14%  Similarity=0.050  Sum_probs=135.9

Q ss_pred             CCCEEEEecCCC--chHHHHHHHHHhCCCEEEEEeCChhH--HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh--h
Q psy7936          13 DGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMACRDVEK--AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF--K   86 (222)
Q Consensus        13 ~~k~~lVtGas~--giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~--~   86 (222)
                      ++|++|||||++  |||+++|++|+++|++|++++|+...  ...-.+..+...+...........+.++.||+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            378999999985  99999999999999999988877631  11111111111000001111234578899999888  7


Q ss_pred             ------------------hHHHHHHHHHhhccceeEEEechhhHH------------------hhh--------------
Q psy7936          87 ------------------SIRDCAQDINQTEANVHILINNAVYCI------------------LSN--------------  116 (222)
Q Consensus        87 ------------------~v~~~~~~i~~~~~~id~li~~ag~~~------------------l~~--------------  116 (222)
                                        +++++++.+.+.++++|+||||||+..                  -+|              
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              999999999999999999999999631                  000              


Q ss_pred             --------------------------------HHHHHHHHHhhcCC-CCeEEEEEeCCcccCCcCCCCCCCC--------
Q psy7936         117 --------------------------------NILFYSILFYAIPG-KNVNVYAVHPGIVKTELGRYMDDTY--------  155 (222)
Q Consensus       117 --------------------------------~~~~~~~la~~~~~-~gI~v~~v~PG~v~T~~~~~~~~~~--------  155 (222)
                                                      +..|+++|+.|+++ +||+||+|+||+|+|+|........        
T Consensus       161 m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  240 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN  240 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-----------
T ss_pred             HhhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccccccc
Confidence                                            78999999999998 8999999999999999987653100        


Q ss_pred             -------------------C-----------------cchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccccc
Q psy7936         156 -------------------F-----------------PGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       156 -------------------~-----------------~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~  199 (222)
                                         .                 ........|+++  +.+|+|+|+.++||+ ++...++||+.|.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~peevA~~v~fL~-s~~a~~itG~~i~  317 (329)
T 3lt0_A          241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQ--KLLSTDIGSVASFLL-SRESRAITGQTIY  317 (329)
T ss_dssp             -------------------------------CHHHHHHHHHHHHSSSCS--CCCHHHHHHHHHHHH-SGGGTTCCSCEEE
T ss_pred             ccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccC--cCCHHHHHHHHHHHh-CchhccccCcEEE
Confidence                               0                 011112234444  789999999999997 5567899999995


Q ss_pred             ccccc
Q psy7936         200 DYKVA  204 (222)
Q Consensus       200 ~~~~~  204 (222)
                      .++..
T Consensus       318 vdGG~  322 (329)
T 3lt0_A          318 VDNGL  322 (329)
T ss_dssp             ESTTG
T ss_pred             EcCCe
Confidence            54443

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.94  E-value=3.2e-27  Score=190.75  Aligned_cols=178  Identities=24%  Similarity=0.247  Sum_probs=140.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+..           ..++.++.+|+++.+++++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~   71 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-----------PDQIQFFQHDSSDEDGWTK   71 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-----------TTTEEEEECCTTCHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc-----------cCceEEEECCCCCHHHHHH
Confidence            47899999999999999999999999999999999999887776665532           2478899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++.+.+.++++|++|||||...                -+|                                      
T Consensus        72 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  151 (251)
T 1zk4_A           72 LFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS  151 (251)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC
Confidence            99999999999999999998642                000                                      


Q ss_pred             ----------HHHHHHHHHhhcC--CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIP--GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ----------~~~~~~~la~~~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                +..+++.++.++.  ++||++++|+||++.|++.................|+++  ..+|+|+|+.++++
T Consensus       152 ~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l  229 (251)
T 1zk4_A          152 LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGH--IGEPNDIAYICVYL  229 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSS--CBCHHHHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCC--CcCHHHHHHHHHHH
Confidence                      6788889998887  889999999999999998765431100000101123333  67999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      +++ ...+++|+.+..++
T Consensus       230 ~~~-~~~~~~G~~~~v~g  246 (251)
T 1zk4_A          230 ASN-ESKFATGSEFVVDG  246 (251)
T ss_dssp             HSG-GGTTCCSCEEEEST
T ss_pred             cCc-ccccccCcEEEECC
Confidence            754 46789999985443

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.94  E-value=1.6e-27  Score=192.91  Aligned_cols=171  Identities=21%  Similarity=0.233  Sum_probs=134.6

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ...+|++|++|||||++|||+++++.|+++|++|++++|+.+.++                     .+..+++|+++.++
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------~~~~~~~D~~~~~~   67 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK---------------------GLFGVEVDVTDSDA   67 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------------------TSEEEECCTTCHHH
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH---------------------HhcCeeccCCCHHH
Confidence            345688999999999999999999999999999999999875321                     11148899999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      ++++++.+.+.++++|++|||||+...                +|                                   
T Consensus        68 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  147 (247)
T 1uzm_A           68 VDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI  147 (247)
T ss_dssp             HHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC
Confidence            999999999999999999999996430                00                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..+++.++.|++++||+||+|+||+++|+|....... .........|+++  +.+|+|+|+.++||
T Consensus       148 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~p~~~--~~~~~dvA~~~~~l  224 (247)
T 1uzm_A          148 GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDER-IQQGALQFIPAKR--VGTPAEVAGVVSFL  224 (247)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHH-HHHHHGGGCTTCS--CBCHHHHHHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHH-HHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                        78899999999999999999999999999986543211 0011101123333  67999999999999


Q ss_pred             hcCCCcccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~~  203 (222)
                      ++ +...+++|+.+..++.
T Consensus       225 ~s-~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          225 AS-EDASYISGAVIPVDGG  242 (247)
T ss_dssp             HS-GGGTTCCSCEEEESTT
T ss_pred             cC-ccccCCcCCEEEECCC
Confidence            74 5567999999954443

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.94  E-value=5.5e-27  Score=188.96  Aligned_cols=178  Identities=26%  Similarity=0.298  Sum_probs=138.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +|++|++|||||++|||++++++|+++|++|+++ .|+.+.++++.+.++..          +.++.++++|+++.++++
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~   71 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA----------GINVVVAKGDVKNPEDVE   71 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT----------TCCEEEEESCTTSHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc----------CCcEEEEECCCCCHHHHH
Confidence            3678999999999999999999999999999998 67777777777777653          557899999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||....                +|                                     
T Consensus        72 ~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  151 (247)
T 2hq1_A           72 NMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG  151 (247)
T ss_dssp             HHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC
Confidence            9999999999999999999997530                00                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..+++.++.+++++||+||+|+||+++|++....... .........|+.+  ..+|+|+|+.+.+++.
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~dva~~~~~l~~  228 (247)
T 2hq1_A          152 QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDK-VKEMYLNNIPLKR--FGTPEEVANVVGFLAS  228 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH-HHHHHHTTSTTSS--CBCHHHHHHHHHHHHS
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchH-HHHHHHhhCCCCC--CCCHHHHHHHHHHHcC
Confidence                      67889999999999999999999999999987643211 0000001122333  6799999999999974


Q ss_pred             CCCccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYK  202 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~  202 (222)
                      . ...+++|+.+..++
T Consensus       229 ~-~~~~~~G~~~~v~g  243 (247)
T 2hq1_A          229 D-DSNYITGQVINIDG  243 (247)
T ss_dssp             G-GGTTCCSCEEEEST
T ss_pred             c-ccccccCcEEEeCC
Confidence            4 46789999885443

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=8.5e-27  Score=190.40  Aligned_cols=180  Identities=22%  Similarity=0.309  Sum_probs=139.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +++|+++||||++|||+++++.|++.|++|++++|+.+.++++.+.+....        .+.++.++++|+++.++++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~D~~~~~~v~~~   76 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF--------EPQKTLFIQCDVADQQQLRDT   76 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS--------CGGGEEEEECCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc--------CCCceEEEecCCCCHHHHHHH
Confidence            578999999999999999999999999999999999988877776664421        134688999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH-------------------------hh------h------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI-------------------------LS------N------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~-------------------------l~------~------------------------  116 (222)
                      ++.+.+.++++|++|||||...                         +.      .                        
T Consensus        77 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  156 (267)
T 2gdz_A           77 FRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCAS  156 (267)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHH
Confidence            9999999999999999998642                         00      0                        


Q ss_pred             ---HHHHHHHH--HhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcc---hh--hhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ---NILFYSIL--FYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPG---AR--TLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ---~~~~~~~l--a~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                         +..+++++  +.+++++||+||+|+||+++|+|...........   ..  ....+..+..+.+|+|+|+.++++++
T Consensus       157 K~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s  236 (267)
T 2gdz_A          157 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE  236 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhc
Confidence               67788874  6788899999999999999999865432110000   00  01123344335799999999999986


Q ss_pred             CCCccccccccccccc
Q psy7936         187 DEGAAKETGLYYSDYK  202 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~~  202 (222)
                      ++   .++|+.+..++
T Consensus       237 ~~---~~~G~~~~v~g  249 (267)
T 2gdz_A          237 DD---ALNGAIMKITT  249 (267)
T ss_dssp             CT---TCSSCEEEEET
T ss_pred             Cc---CCCCcEEEecC
Confidence            54   58999984443

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.94  E-value=1.2e-26  Score=186.97  Aligned_cols=178  Identities=27%  Similarity=0.316  Sum_probs=142.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+....         +.++.++.+|+++.+++++
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~   74 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY---------GVKAHGVEMNLLSEESINK   74 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---------CCCEEEEECCTTCHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc---------CCceEEEEccCCCHHHHHH
Confidence            5789999999999999999999999999999999999998888877776531         4578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------hhh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------LSN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------l~~--------------------------------------  116 (222)
                      +++++.+.++++|++|||||...                -+|                                      
T Consensus        75 ~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  154 (248)
T 2pnf_A           75 AFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQ  154 (248)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCC
Confidence            99999999999999999998642                000                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..+++.++.+++++||++|+|+||+++|++....... .........|..+  +.+|+|+|+.+.+++..
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~dva~~~~~l~~~  231 (248)
T 2pnf_A          155 VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEE-IKQKYKEQIPLGR--FGSPEEVANVVLFLCSE  231 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH-HHHHHHHTCTTSS--CBCHHHHHHHHHHHHSG
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHH-HHHHHHhcCCCCC--ccCHHHHHHHHHHHhCc
Confidence                     68889999999998999999999999999987643210 0000001112223  67899999999999754


Q ss_pred             CCcccccccccccc
Q psy7936         188 EGAAKETGLYYSDY  201 (222)
Q Consensus       188 ~~~~~~~G~~i~~~  201 (222)
                       ...+++|+.+..+
T Consensus       232 -~~~~~~G~~~~v~  244 (248)
T 2pnf_A          232 -LASYITGEVIHVN  244 (248)
T ss_dssp             -GGTTCCSCEEEES
T ss_pred             -hhhcCCCcEEEeC
Confidence             4578999988543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.94  E-value=1.1e-25  Score=186.89  Aligned_cols=163  Identities=27%  Similarity=0.401  Sum_probs=135.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh-hhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF-KSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v   88 (222)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...         ++.++.++++|+++. +++
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~Dl~~~~~~v   78 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS---------NHENVVFHQLDVTDPIATM   78 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------TCCSEEEEECCTTSCHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------CCCceEEEEccCCCcHHHH
Confidence            3467999999999999999999999999999999999999999998888765         356899999999998 999


Q ss_pred             HHHHHHHHhhccceeEEEechhhH-----------------------------------------------H--------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYC-----------------------------------------------I--------  113 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~-----------------------------------------------~--------  113 (222)
                      +.+++.+.+.++++|+||||||+.                                               .        
T Consensus        79 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  158 (311)
T 3o26_A           79 SSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKS  158 (311)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHH
Confidence            999999999999999999999963                                               0        


Q ss_pred             ----------------------------h-------------------------------------------hh------
Q psy7936         114 ----------------------------L-------------------------------------------SN------  116 (222)
Q Consensus       114 ----------------------------l-------------------------------------------~~------  116 (222)
                                                  .                                           ..      
T Consensus       159 l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  238 (311)
T 3o26_A          159 VTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTT  238 (311)
T ss_dssp             HHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHH
T ss_pred             HHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHH
Confidence                                        0                                           00      


Q ss_pred             ----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccc
Q psy7936         117 ----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAK  192 (222)
Q Consensus       117 ----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~  192 (222)
                          +..+++.++.++++  |+||+|+||+|+|+|.....                  ..+|+++|+.+++++..++ ..
T Consensus       239 SK~a~~~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~------------------~~~~~~~a~~~~~~~~~~~-~~  297 (311)
T 3o26_A          239 SKACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGIG------------------NYTAEEGAEHVVRIALFPD-DG  297 (311)
T ss_dssp             HHHHHHHHHHHHHHHCTT--SEEEEECCCSBCSGGGTTCC------------------SBCHHHHHHHHHHHHTCCS-SC
T ss_pred             HHHHHHHHHHHHHhhcCC--ceEEEecCCceecCCcCCCC------------------CCCHHHHHHHHHHHHhCCC-CC
Confidence                45677888888864  99999999999999987654                  4689999999999987664 46


Q ss_pred             cccccccccc
Q psy7936         193 ETGLYYSDYK  202 (222)
Q Consensus       193 ~~G~~i~~~~  202 (222)
                      .+|.++....
T Consensus       298 ~~g~~~~~s~  307 (311)
T 3o26_A          298 PSGFFYDCSE  307 (311)
T ss_dssp             CCSCEETC--
T ss_pred             CCceEecccc
Confidence            6777775443

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.94  E-value=8.4e-26  Score=184.20  Aligned_cols=164  Identities=24%  Similarity=0.365  Sum_probs=138.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHh-CCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYG-IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ++|++|||||++|||+++++.|++ .|++|++++|+.+.++++.+.+...          +.++.++.+|+++.++++++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~~~~~~~~~   72 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE----------GLSPRFHQLDIDDLQSIRAL   72 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT----------TCCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc----------CCeeEEEECCCCCHHHHHHH
Confidence            578999999999999999999999 9999999999999888888887653          45788999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH----------------hhh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI----------------LSN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------------  116 (222)
                      ++.+.+.++++|+||||||...                -+|                                       
T Consensus        73 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~  152 (276)
T 1wma_A           73 RDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPE  152 (276)
T ss_dssp             HHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHH
T ss_pred             HHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChh
Confidence            9999999999999999998641                000                                       


Q ss_pred             -----------------------------------------------HHHHHHHHHhhcCC----CCeEEEEEeCCcccC
Q psy7936         117 -----------------------------------------------NILFYSILFYAIPG----KNVNVYAVHPGIVKT  145 (222)
Q Consensus       117 -----------------------------------------------~~~~~~~la~~~~~----~gI~v~~v~PG~v~T  145 (222)
                                                                     +..+++.++.++++    +||+||+|+||+++|
T Consensus       153 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t  232 (276)
T 1wma_A          153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT  232 (276)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred             HHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCcccc
Confidence                                                           22566677777766    799999999999999


Q ss_pred             CcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC-ccccccccccccccc
Q psy7936         146 ELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG-AAKETGLYYSDYKVA  204 (222)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~-~~~~~G~~i~~~~~~  204 (222)
                      +|.....                  +.+|+|+|+.++++++++. ..+++|++|.+++..
T Consensus       233 ~~~~~~~------------------~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~~~  274 (276)
T 1wma_A          233 DMAGPKA------------------TKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVE  274 (276)
T ss_dssp             TTTCTTC------------------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEE
T ss_pred             CcCCccc------------------cCChhHhhhhHhhhhcCcccccccCceEeccCcee
Confidence            9976421                  5799999999999987663 468999999876654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.94  E-value=1.2e-25  Score=180.89  Aligned_cols=166  Identities=20%  Similarity=0.215  Sum_probs=140.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC-------EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA-------KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      +|++|||||++|||++++++|++.|+       +|++++|+.+.++++.+.+..          .+.++.++++|+++.+
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~   71 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA----------EGALTDTITADISDMA   71 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT----------TTCEEEEEECCTTSHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHc----------cCCeeeEEEecCCCHH
Confidence            68999999999999999999999999       999999999888888777754          2568999999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------------  116 (222)
                      ++.++++.+.+.++++|++|||||....                +|                                  
T Consensus        72 ~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  151 (244)
T 2bd0_A           72 DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA  151 (244)
T ss_dssp             HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC
Confidence            9999999999999999999999986420                00                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                   +..+++.++.+++++||+|++|+||++.|+|........   .         ....+|+|+|+.+++
T Consensus       152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~---------~~~~~~~dva~~~~~  219 (244)
T 2bd0_A          152 FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM---Q---------ALMMMPEDIAAPVVQ  219 (244)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT---G---------GGSBCHHHHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc---c---------ccCCCHHHHHHHHHH
Confidence                         678899999999999999999999999999986543211   0         127899999999999


Q ss_pred             HhcCCCccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~  202 (222)
                      ++.+ ...+++|+.+...+
T Consensus       220 l~~~-~~~~~~g~~~~~~~  237 (244)
T 2bd0_A          220 AYLQ-PSRTVVEEIILRPT  237 (244)
T ss_dssp             HHTS-CTTEEEEEEEEEET
T ss_pred             HHhC-CccccchheEEecc
Confidence            9754 56789998885444

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.94  E-value=1.8e-26  Score=188.97  Aligned_cols=184  Identities=20%  Similarity=0.156  Sum_probs=141.3

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+.+.+++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+..           ..++.++.+|+++.+
T Consensus         9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~   77 (278)
T 2bgk_A            9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-----------PDVISFVHCDVTKDE   77 (278)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-----------TTTEEEEECCTTCHH
T ss_pred             CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-----------CCceEEEECCCCCHH
Confidence            344568899999999999999999999999999999999998877766655521           237889999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH------------------hhh--------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI------------------LSN--------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~------------------l~~--------------------------------  116 (222)
                      +++++++.+.+.++++|++|||||...                  -+|                                
T Consensus        78 ~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  157 (278)
T 2bgk_A           78 DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF  157 (278)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeecccc
Confidence            999999999999999999999998641                  000                                


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC--CcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY--FPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                                      +..+++.++.+++++||+|++|+||++.|++........  .........+.....+.+|+|+|
T Consensus       158 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  237 (278)
T 2bgk_A          158 TAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVA  237 (278)
T ss_dssp             CCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHH
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHH
Confidence                            678899999999999999999999999999976543210  00000000000011267999999


Q ss_pred             HHHHHHhcCCCccccccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.+++++. +...+++|+.+..++
T Consensus       238 ~~~~~l~~-~~~~~~~G~~~~v~g  260 (278)
T 2bgk_A          238 DAVAYLAG-DESKYVSGLNLVIDG  260 (278)
T ss_dssp             HHHHHHHS-GGGTTCCSCEEEEST
T ss_pred             HHHHHHcC-cccccCCCCEEEECC
Confidence            99999974 446789999995443

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.94  E-value=2e-27  Score=191.82  Aligned_cols=168  Identities=12%  Similarity=0.046  Sum_probs=128.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEE-e--CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-C--RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~--r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|||||++|||+++++.|+++|++|+++ +  |+.+.++++.+.+ .           +.       |+.+.+++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~-----------~~-------~~~~~~~v~~   61 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P-----------GT-------IALAEQKPER   61 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T-----------TE-------EECCCCCGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C-----------CC-------cccCHHHHHH
Confidence            5899999999999999999999999999999 6  9998877766544 1           11       2237788888


Q ss_pred             HHHHHHhhccceeEEEechhhHHh-------------------hh-----------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL-------------------SN-----------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l-------------------~~-----------------------------------  116 (222)
                      +++.+.+.++++|+||||||+...                   +|                                   
T Consensus        62 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  141 (244)
T 1zmo_A           62 LVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL  141 (244)
T ss_dssp             HHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC
Confidence            999999999999999999986321                   00                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcC---CCCCCCCCcchhhh-HHHHHHHhcCChHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELG---RYMDDTYFPGARTL-GRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~p~e~a~~  180 (222)
                                  +..++++++.|++++||+||+|+||+++|+|.   ......+....... ..|+++  +.+|+|+|+.
T Consensus       142 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~pe~vA~~  219 (244)
T 1zmo_A          142 AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGR--LGRPDEMGAL  219 (244)
T ss_dssp             TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCS--CBCHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCC--CcCHHHHHHH
Confidence                        78999999999999999999999999999997   43211111111101 123334  6799999999


Q ss_pred             HHHHhcCCCcccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ++||++ +...++||+++..++.
T Consensus       220 v~~l~s-~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          220 ITFLAS-RRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             HHHHHT-TTTGGGTTCEEEESTT
T ss_pred             HHHHcC-ccccCccCCEEEeCCC
Confidence            999975 4578999999955443

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.94  E-value=1.9e-26  Score=196.35  Aligned_cols=169  Identities=14%  Similarity=-0.064  Sum_probs=137.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHh-CCCEEEEEeCChhHH------------HHHHHHHHHhhhhhcccCCCCCeEEEEe
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYG-IGAKVIMACRDVEKA------------ETTASEIRKHFEVATSEDKKPGEVLIKK   79 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~-~g~~v~~~~r~~~~~------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~   79 (222)
                      .+|++|||||++|||+++|+.|++ .|++|++++|+.+..            +.+.+.++.          .+.++..+.
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~----------~G~~a~~i~  115 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ----------KGLYAKSIN  115 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH----------TTCCEEEEE
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh----------cCCceEEEE
Confidence            689999999999999999999999 999999999876432            123334443          256889999


Q ss_pred             cCCCChhhHHHHHHHHHhhccceeEEEechhhH---------------------------------------H-------
Q psy7936          80 LDLASFKSIRDCAQDINQTEANVHILINNAVYC---------------------------------------I-------  113 (222)
Q Consensus        80 ~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~---------------------------------------~-------  113 (222)
                      +|+++.++++++++.+.+.+|++|+||||||..                                       .       
T Consensus       116 ~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~  195 (405)
T 3zu3_A          116 GDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEI  195 (405)
T ss_dssp             SCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHH
Confidence            999999999999999999999999999999873                                       0       


Q ss_pred             -----------h---hh----------------------------------------HHHHHHHHHhhcCCC-CeEEEEE
Q psy7936         114 -----------L---SN----------------------------------------NILFYSILFYAIPGK-NVNVYAV  138 (222)
Q Consensus       114 -----------l---~~----------------------------------------~~~~~~~la~~~~~~-gI~v~~v  138 (222)
                                 +   +.                                        +..++++|+.|++++ |||||+|
T Consensus       196 ~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaV  275 (405)
T 3zu3_A          196 DSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVS  275 (405)
T ss_dssp             HHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEE
T ss_pred             HHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEE
Confidence                       0   00                                        899999999999999 9999999


Q ss_pred             eCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccccccccc
Q psy7936         139 HPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYY  198 (222)
Q Consensus       139 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i  198 (222)
                      +||+++|+|....+..+.... ....++++  ..+||++++.+.||+++    ++.|..+
T Consensus       276 aPG~i~T~~s~~ip~~p~y~~-~l~~~mkr--~G~~Ed~a~~i~~L~sd----~l~~~~~  328 (405)
T 3zu3_A          276 VLKAVVSQASSAIPMMPLYLS-LLFKVMKE--KGTHEGCIEQVYSLYKD----SLCGDSP  328 (405)
T ss_dssp             ECCCCCCHHHHTSTTHHHHHH-HHHHHHHH--HTCCCCHHHHHHHHHHH----TTSSSCC
T ss_pred             EeCCCcCchhhcCCCCcHHHH-HHHHHHhc--CCCcHHHHHHHHHHHhc----cccCCCC
Confidence            999999999887653221112 14457777  89999999999999744    5667665

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.94  E-value=3.7e-26  Score=191.37  Aligned_cols=188  Identities=18%  Similarity=0.155  Sum_probs=118.6

Q ss_pred             CCCCCCEEEEecC--CCchHHHHHHHHHhCCCEEEEEeCCh-----------hHHHH-----------HHHHHHHhhhhh
Q psy7936          10 SRLDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDV-----------EKAET-----------TASEIRKHFEVA   65 (222)
Q Consensus        10 ~~~~~k~~lVtGa--s~giG~~~a~~l~~~g~~v~~~~r~~-----------~~~~~-----------~~~~i~~~~~~~   65 (222)
                      ++|++|++|||||  ++|||+++|+.|+++|++|++++|++           +.+++           +.++++....  
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   82 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV--   82 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc--
Confidence            4578999999999  89999999999999999999998753           22221           1222221100  


Q ss_pred             cccCCCCCeEEEEe----------cCCCC--------hhhHHHHHHHHHhhccceeEEEechhhHH-----h--------
Q psy7936          66 TSEDKKPGEVLIKK----------LDLAS--------FKSIRDCAQDINQTEANVHILINNAVYCI-----L--------  114 (222)
Q Consensus        66 ~~~~~~~~~~~~~~----------~D~~~--------~~~v~~~~~~i~~~~~~id~li~~ag~~~-----l--------  114 (222)
                         ......+....          +|+++        .++++++++++.+.++++|+||||||+..     +        
T Consensus        83 ---~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~  159 (319)
T 2ptg_A           83 ---DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGY  159 (319)
T ss_dssp             -----CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHH
T ss_pred             ---cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHH
Confidence               00001222222          33333        45899999999999999999999998541     0        


Q ss_pred             -----hh----------------------------------------------HHHHHHHHHhhcCC-CCeEEEEEeCCc
Q psy7936         115 -----SN----------------------------------------------NILFYSILFYAIPG-KNVNVYAVHPGI  142 (222)
Q Consensus       115 -----~~----------------------------------------------~~~~~~~la~~~~~-~gI~v~~v~PG~  142 (222)
                           +|                                              +..|+++|+.|+++ +||+||+|+||+
T Consensus       160 ~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~  239 (319)
T 2ptg_A          160 LAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGP  239 (319)
T ss_dssp             HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred             HHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCC
Confidence                 00                                              68899999999985 899999999999


Q ss_pred             ccCCcCCCCCCC---CCc----chhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccccccccccc
Q psy7936         143 VKTELGRYMDDT---YFP----GARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       143 v~T~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      ++|+|.......   .+.    .......|+++  +.+|+|+|+.++||+ ++...++||++|..++...
T Consensus       240 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~peevA~~v~~L~-s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          240 LKSRAASAIGKAGDKTFIDLAIDYSEANAPLQK--ELESDDVGRAALFLL-SPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             CC---------------------------------CCCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTCT
T ss_pred             ccChhhhhcccccchhhHHHHHHHHhccCCCCC--CCCHHHHHHHHHHHh-CcccCCccCCEEEECCCce
Confidence            999997654311   010    11112346666  789999999999996 4567899999995554443

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.93  E-value=1.6e-26  Score=187.22  Aligned_cols=179  Identities=25%  Similarity=0.209  Sum_probs=141.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC-hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .+|++|+++||||++|||++++++|+++|++|++++|+ .+.++++.+.++..          +.++.++.+|+++.+++
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~   72 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD----------GGDAAFFAADLATSEAC   72 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT----------TCEEEEEECCTTSHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc----------CCceEEEECCCCCHHHH
Confidence            34789999999999999999999999999999999999 78888887777653          55889999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhh-HH---------------------------------h------h---h---------
Q psy7936          89 RDCAQDINQTEANVHILINNAVY-CI---------------------------------L------S---N---------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~-~~---------------------------------l------~---~---------  116 (222)
                      +++++++.+.++++|++|||||. ..                                 +      .   .         
T Consensus        73 ~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~  152 (258)
T 3afn_B           73 QQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIA  152 (258)
T ss_dssp             HHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchh
Confidence            99999999999999999999996 11                                 0      1   1         


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                                        +..+++.++.+++++||+||+|+||++.|++.....+ ..........|+.+  ..+|+|+|
T Consensus       153 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~--~~~~~dva  229 (258)
T 3afn_B          153 GHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQ-DVRDRISNGIPMGR--FGTAEEMA  229 (258)
T ss_dssp             HHHCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCH-HHHHHHHTTCTTCS--CBCGGGTH
T ss_pred             hccCCCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCH-HHHHHHhccCCCCc--CCCHHHHH
Confidence                              5677888888888889999999999999998765321 11111101123333  67999999


Q ss_pred             HHHHHHhcCCCcc-ccccccccccc
Q psy7936         179 QTTLHCALDEGAA-KETGLYYSDYK  202 (222)
Q Consensus       179 ~~i~~l~~~~~~~-~~~G~~i~~~~  202 (222)
                      +.+++++.+ ... +++|+.+..++
T Consensus       230 ~~~~~l~~~-~~~~~~~G~~~~v~g  253 (258)
T 3afn_B          230 PAFLFFASH-LASGYITGQVLDING  253 (258)
T ss_dssp             HHHHHHHCH-HHHTTCCSEEEEEST
T ss_pred             HHHHHHhCc-chhccccCCEEeECC
Confidence            999999754 345 88999885443

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.93  E-value=2.4e-26  Score=186.36  Aligned_cols=160  Identities=10%  Similarity=-0.014  Sum_probs=130.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+..+|++|||||++|||+++|+.|+++|++|++++|+.+...                      ...+.+|++|.++++
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~----------------------~~~~~~d~~d~~~v~   75 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA----------------------DHSFTIKDSGEEEIK   75 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS----------------------SEEEECSCSSHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------------------ccceEEEeCCHHHHH
Confidence            4445799999999999999999999999999999999876321                      125788999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-----------------hhh------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-----------------LSN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-----------------l~~------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||+..                 -+|                                    
T Consensus        76 ~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~  155 (251)
T 3orf_A           76 SVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGM  155 (251)
T ss_dssp             HHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCC
Confidence            999999999999999999999632                 000                                    


Q ss_pred             ---------HHHHHHHHHhhcC--CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ---------NILFYSILFYAIP--GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ---------~~~~~~~la~~~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                               +..+++.++.+++  ++||+||+|+||+++|+|........         +..+  +.+|+|+|+.+++++
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~~~--~~~~~dva~~i~~l~  224 (251)
T 3orf_A          156 IAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDA---------NFDD--WTPLSEVAEKLFEWS  224 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTS---------CGGG--SBCHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcccc---------cccc--cCCHHHHHHHHHHHh
Confidence                     7899999999976  88999999999999999976543221         1222  689999999999998


Q ss_pred             cCCCccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYK  202 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~  202 (222)
                      .++...+++|+.+....
T Consensus       225 ~~~~~~~~tG~~i~v~~  241 (251)
T 3orf_A          225 TNSDSRPTNGSLVKFET  241 (251)
T ss_dssp             HCGGGCCCTTCEEEEEE
T ss_pred             cCccccCCcceEEEEec
Confidence            77467899999995443

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.93  E-value=1.1e-26  Score=186.88  Aligned_cols=168  Identities=20%  Similarity=0.203  Sum_probs=131.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|+++||||++|||+++++.|+++|++|++++|+.+..   .+.+             +  +.++++|+++ +++.++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~-------------~--~~~~~~D~~~-~~~~~~~~   62 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL-------------G--AVPLPTDLEK-DDPKGLVK   62 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH-------------T--CEEEECCTTT-SCHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh-------------C--cEEEecCCch-HHHHHHHH
Confidence            68999999999999999999999999999999998752   2221             1  5678999999 99999999


Q ss_pred             HHHhhccceeEEEechhhHH----------------hhh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCI----------------LSN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------------  116 (222)
                      .+.+.++++|++|||||...                -+|                                         
T Consensus        63 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  142 (239)
T 2ekp_A           63 RALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIP  142 (239)
T ss_dssp             HHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCc
Confidence            99998999999999998642                000                                         


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                              +..+++.++.+++++||+||+|+||+++|+|....... ..........|+++  +.+|+|+|+.++||+ +
T Consensus       143 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~dvA~~~~~l~-s  219 (239)
T 2ekp_A          143 AYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGR--WARPEEIARVAAVLC-G  219 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSS--CBCHHHHHHHHHHHT-S
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHHc-C
Confidence                    67889999999999999999999999999987542111 11111101123333  679999999999996 4


Q ss_pred             CCcccccccccccccc
Q psy7936         188 EGAAKETGLYYSDYKV  203 (222)
Q Consensus       188 ~~~~~~~G~~i~~~~~  203 (222)
                      +...+++|+.+..++.
T Consensus       220 ~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          220 DEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             GGGTTCCSCEEEESTT
T ss_pred             chhcCCCCCEEEECCC
Confidence            4578999999954443

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.93  E-value=2.3e-26  Score=198.38  Aligned_cols=189  Identities=11%  Similarity=-0.014  Sum_probs=146.0

Q ss_pred             CCCCEEEEecCCCchHHH--HHHHHHhCCCEEEEEeCChhH------------HHHHHHHHHHhhhhhcccCCCCCeEEE
Q psy7936          12 LDGKTVIITGCNTGIGKV--TAQTLYGIGAKVIMACRDVEK------------AETTASEIRKHFEVATSEDKKPGEVLI   77 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~--~a~~l~~~g~~v~~~~r~~~~------------~~~~~~~i~~~~~~~~~~~~~~~~~~~   77 (222)
                      ..+|++|||||++|||++  +++.|++.|++|++++|+.+.            .+.+.+.++.          .+.++.+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~  127 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK----------KGLVAKN  127 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH----------TTCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH----------cCCcEEE
Confidence            578999999999999999  999999999999999997543            2333434433          3668899


Q ss_pred             EecCCCChhhHHHHHHHHHhhccceeEEEechhhH----------------------------------------H----
Q psy7936          78 KKLDLASFKSIRDCAQDINQTEANVHILINNAVYC----------------------------------------I----  113 (222)
Q Consensus        78 ~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~----------------------------------------~----  113 (222)
                      ++||+++.++++++++.+.+.++++|+||||||..                                        .    
T Consensus       128 ~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e  207 (418)
T 4eue_A          128 FIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIE  207 (418)
T ss_dssp             EESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHH
T ss_pred             EEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHH
Confidence            99999999999999999999999999999999873                                        0    


Q ss_pred             -------------h---hh----------------------------------------HHHHHHHHHhhcCC-CCeEEE
Q psy7936         114 -------------L---SN----------------------------------------NILFYSILFYAIPG-KNVNVY  136 (222)
Q Consensus       114 -------------l---~~----------------------------------------~~~~~~~la~~~~~-~gI~v~  136 (222)
                                   +   ..                                        +..++++|+.|+++ +||+||
T Consensus       208 ~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN  287 (418)
T 4eue_A          208 EIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAF  287 (418)
T ss_dssp             HHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEE
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEE
Confidence                         0   00                                        78999999999999 999999


Q ss_pred             EEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccccccccc-cc-ccccccCCCccccc
Q psy7936         137 AVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYY-SD-YKVAKSRNFPFELK  214 (222)
Q Consensus       137 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i-~~-~~~~~~~~~~~~~~  214 (222)
                      +|+||+++|++....+..+.... ....++++  ..+||++++.+.+|+.+   ...+|+.+ .+ ++......+-.+.+
T Consensus       288 ~V~PG~v~T~~s~~ip~~p~y~~-~~~~~mk~--~G~~E~v~e~~~~L~sd---~~~~g~~~~~D~~~~~r~d~~e~~~~  361 (418)
T 4eue_A          288 VSVNKALVTKASAYIPTFPLYAA-ILYKVMKE--KNIHENCIMQIERMFSE---KIYSNEKIQFDDKGRLRMDDLELRKD  361 (418)
T ss_dssp             EEECCCCCCHHHHTSTTHHHHHH-HHHHHHHH--TTCCCCHHHHHHHHHHH---TTSSSSCCCCCTTSCEESCTTTTCHH
T ss_pred             EEECCcCcChhhhcCCCCcHHHH-HHHHHHhh--cCChHHHHHHHHHHhhc---cccCCCccccCCCceeeCChhhcCHH
Confidence            99999999999887753211111 13345666  79999999999999755   36688885 33 34444455554444


Q ss_pred             CC
Q psy7936         215 GK  216 (222)
Q Consensus       215 ~~  216 (222)
                      .|
T Consensus       362 ~q  363 (418)
T 4eue_A          362 VQ  363 (418)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.93  E-value=2.9e-27  Score=190.86  Aligned_cols=166  Identities=20%  Similarity=0.140  Sum_probs=129.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHh-CCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYG-IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ++|++|||||++|||+++|+.|++ .|++|++++|+.+.                    ....+.++++|+++.++++++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~--------------------~~~~~~~~~~Dv~~~~~v~~~   62 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF--------------------SAENLKFIKADLTKQQDITNV   62 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC--------------------CCTTEEEEECCTTCHHHHHHH
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc--------------------ccccceEEecCcCCHHHHHHH
Confidence            578999999999999999999999 78899999987641                    133568999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH----------------hhh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI----------------LSN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------------  116 (222)
                      ++.+.  ++++|++|||||+..                -+|                                       
T Consensus        63 ~~~~~--~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  140 (244)
T 4e4y_A           63 LDIIK--NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAY  140 (244)
T ss_dssp             HHHTT--TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHH
T ss_pred             HHHHH--hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchh
Confidence            96554  679999999999853                000                                       


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC----------CcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY----------FPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                            +..+++.++.|++++||+||+|+||+++|+|........          .........|+++  ..+|+|+|+.
T Consensus       141 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~p~dvA~~  218 (244)
T 4e4y_A          141 TLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNR--IAQPQEIAEL  218 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSS--CBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCC--CcCHHHHHHH
Confidence                  899999999999999999999999999999876432110          0011111223334  6799999999


Q ss_pred             HHHHhcCCCcccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ++||++ +...++||+.|..++.
T Consensus       219 v~~l~s-~~~~~itG~~i~vdGG  240 (244)
T 4e4y_A          219 VIFLLS-DKSKFMTGGLIPIDGG  240 (244)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESTT
T ss_pred             HHHHhc-CccccccCCeEeECCC
Confidence            999974 4578999999954443

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=2.3e-27  Score=191.61  Aligned_cols=171  Identities=22%  Similarity=0.160  Sum_probs=129.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+|++|++|||||++|||+++++.|+++|++|++++|+.+.++++. .+              .++.++++|+++.++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~--------------~~~~~~~~D~~~~~~~~   66 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY--------------PGIQTRVLDVTKKKQID   66 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS--------------TTEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc--------------cCceEEEeeCCCHHHHH
Confidence            3578999999999999999999999999999999999987654432 11              16788999999999988


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++    .+.++++|++|||||....                +|                                     
T Consensus        67 ~~----~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  142 (246)
T 2ag5_A           67 QF----ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV  142 (246)
T ss_dssp             HH----HHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT
T ss_pred             HH----HHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCC
Confidence            44    4456899999999996430                00                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC-----CCCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD-----TYFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                 +..+++.++.+++++||+||+|+||+++|++......     ...........|.++  ..+|+|+|+.
T Consensus       143 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dvA~~  220 (246)
T 2ag5_A          143 NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGR--FATAEEIAML  220 (246)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSS--CEEHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCC--CCCHHHHHHH
Confidence                       7889999999999999999999999999998653110     000000001113333  6799999999


Q ss_pred             HHHHhcCCCccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      ++||+ ++...+++|+.|..++
T Consensus       221 v~~l~-s~~~~~~tG~~i~vdg  241 (246)
T 2ag5_A          221 CVYLA-SDESAYVTGNPVIIDG  241 (246)
T ss_dssp             HHHHH-SGGGTTCCSCEEEECT
T ss_pred             HHHHh-CccccCCCCCEEEECC
Confidence            99996 4557799999995443

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=8.1e-26  Score=185.71  Aligned_cols=180  Identities=23%  Similarity=0.265  Sum_probs=140.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .|.+|++|++|||||++|||+++++.|++.|++|++++|+.+.++++.+.++...        ...++.++.+|+++.++
T Consensus        26 ~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~   97 (279)
T 1xg5_A           26 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG--------YPGTLIPYRCDLSNEED   97 (279)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--------CSSEEEEEECCTTCHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC--------CCceEEEEEecCCCHHH
Confidence            3455789999999999999999999999999999999999998888888776541        23578899999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH-------------------------hh--------------h------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI-------------------------LS--------------N------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~-------------------------l~--------------~------------  116 (222)
                      ++++++.+.+.++++|+||||||...                         ++              .            
T Consensus        98 v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  177 (279)
T 1xg5_A           98 ILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR  177 (279)
T ss_dssp             HHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcc
Confidence            99999999999999999999998532                         00              0            


Q ss_pred             ----------------HHHHHHHHHhhcC--CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 ----------------NILFYSILFYAIP--GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                                      +..+++.++.+++  +.||+||+|+||+++|+|........ ........+..+  ..+|+|+|
T Consensus       178 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~--~~~~~dvA  254 (279)
T 1xg5_A          178 VLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD-PEKAAATYEQMK--CLKPEDVA  254 (279)
T ss_dssp             CCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTC-HHHHHHHHC-----CBCHHHHH
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccC-hhHHhhhccccc--CCCHHHHH
Confidence                            6778889999987  88999999999999999853221111 111101122223  68999999


Q ss_pred             HHHHHHhcCCCcccccccccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~  199 (222)
                      +.+++++..+ ..+.+|....
T Consensus       255 ~~i~~l~~~~-~~~~~g~i~i  274 (279)
T 1xg5_A          255 EAVIYVLSTP-AHIQIGDIQM  274 (279)
T ss_dssp             HHHHHHHHSC-TTEEEEEEEE
T ss_pred             HHHHHHhcCC-cceEeeeEEE
Confidence            9999998664 4577776553

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.93  E-value=3.9e-26  Score=186.56  Aligned_cols=181  Identities=18%  Similarity=0.144  Sum_probs=142.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .+++++|++|||||++|||++++++|+++|++|++++| +.+.++++.+.++..          +.++.++.+|+++.++
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~~   85 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL----------GAQGVAIQADISKPSE   85 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCCEEEEECCTTSHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc----------CCcEEEEEecCCCHHH
Confidence            35678999999999999999999999999999999999 788888877777653          5578899999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH----------------hhh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI----------------LSN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~-----------------------------------  116 (222)
                      ++++++.+.+.++++|++|||||...                -+|                                   
T Consensus        86 ~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~  165 (274)
T 1ja9_A           86 VVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP  165 (274)
T ss_dssp             HHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCC
Confidence            99999999999999999999998642                000                                   


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC----C---CCc-chh----hhHHHHHHHhcCC
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD----T---YFP-GAR----TLGRVLMWWWMKT  173 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~----~---~~~-~~~----~~~~~~~~~~~~~  173 (222)
                                 +..+++.++.+++++||++++|+||++.|++......    .   ... ...    ....+..+  +.+
T Consensus       166 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  243 (274)
T 1ja9_A          166 NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKR--IGY  243 (274)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSS--CBC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCC--ccC
Confidence                       6788889999998899999999999999998652100    0   000 000    01112222  679


Q ss_pred             hHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         174 PEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       174 p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+|+|+.+++++.+ ...+++|+.+..++
T Consensus       244 ~~dva~~i~~l~~~-~~~~~~G~~~~v~g  271 (274)
T 1ja9_A          244 PADIGRAVSALCQE-ESEWINGQVIKLTG  271 (274)
T ss_dssp             HHHHHHHHHHHHSG-GGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhCc-ccccccCcEEEecC
Confidence            99999999999744 46788999885443

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=8.1e-26  Score=181.41  Aligned_cols=161  Identities=11%  Similarity=-0.003  Sum_probs=130.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |++|++|||||++|||++++++|+++|++|++++|+.+...                    ....++.+|+++.++++++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--------------------~~~~~~~~D~~~~~~~~~~   60 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------------------DSNILVDGNKNWTEQEQSI   60 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------------------SEEEECCTTSCHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc--------------------cccEEEeCCCCCHHHHHHH
Confidence            46899999999999999999999999999999999876421                    1456789999999999999


Q ss_pred             HHHHHhhc--cceeEEEechhhHH-----------------hhh------------------------------------
Q psy7936          92 AQDINQTE--ANVHILINNAVYCI-----------------LSN------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~--~~id~li~~ag~~~-----------------l~~------------------------------------  116 (222)
                      ++.+.+.+  +++|++|||||+..                 -+|                                    
T Consensus        61 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~  140 (236)
T 1ooe_A           61 LEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSM  140 (236)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB
T ss_pred             HHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCc
Confidence            99998888  79999999999531                 000                                    


Q ss_pred             ---------HHHHHHHHHhhcC--CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ---------NILFYSILFYAIP--GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ---------~~~~~~~la~~~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                               +..+++.++.+++  ++||+||+|+||+++|+|.........         ..+  ..+|+|+|+.+++++
T Consensus       141 ~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---------~~~--~~~~~dvA~~i~~~l  209 (236)
T 1ooe_A          141 IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNAD---------HSS--WTPLSFISEHLLKWT  209 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCC---------GGG--CBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCcc---------ccc--cCCHHHHHHHHHHHH
Confidence                     7889999999998  899999999999999998764321111         111  578999999999665


Q ss_pred             cCCCcccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~~  203 (222)
                      .++...+++|+++..++.
T Consensus       210 ~s~~~~~~~G~~~~v~gg  227 (236)
T 1ooe_A          210 TETSSRPSSGALLKITTE  227 (236)
T ss_dssp             HCGGGCCCTTCEEEEEEE
T ss_pred             cCCCcccccccEEEEecC
Confidence            577788999999954443

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.93  E-value=1.5e-26  Score=187.76  Aligned_cols=169  Identities=14%  Similarity=0.083  Sum_probs=129.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |++|||||++|||+++++.|+++|++|++++|+.+.++++.+ +...          +.++.++     |.++++++++.
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~----------~~~~~~~-----d~~~v~~~~~~   65 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET----------YPQLKPM-----SEQEPAELIEA   65 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH----------CTTSEEC-----CCCSHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc----------CCcEEEE-----CHHHHHHHHHH
Confidence            689999999999999999999999999999999988777665 5443          2334333     77889999999


Q ss_pred             HHhhccceeEEEechhhH-H----------------hhh-----------------------------------------
Q psy7936          95 INQTEANVHILINNAVYC-I----------------LSN-----------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~-~----------------l~~-----------------------------------------  116 (222)
                      +.+.++++|+||||||+. .                -+|                                         
T Consensus        66 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  145 (254)
T 1zmt_A           66 VTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTY  145 (254)
T ss_dssp             HHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHH
T ss_pred             HHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHH
Confidence            989999999999999976 2                000                                         


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcc---------cCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHH
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIV---------KTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTT  181 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v---------~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i  181 (222)
                            +..+++.++.+++++||+||+|+||++         +|+|.....  ..........|+++  +.+|+|+|+.+
T Consensus       146 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~--~~~~~~~~~~p~~~--~~~p~dvA~~v  221 (254)
T 1zmt_A          146 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNP--EHVAHVKKVTALQR--LGTQKELGELV  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCH--HHHHHHHHHSSSSS--CBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccCh--HHHHHHhccCCCCC--CcCHHHHHHHH
Confidence                  789999999999999999999999999         777654311  00011101123333  67999999999


Q ss_pred             HHHhcCCCcccccccccc-ccccc
Q psy7936         182 LHCALDEGAAKETGLYYS-DYKVA  204 (222)
Q Consensus       182 ~~l~~~~~~~~~~G~~i~-~~~~~  204 (222)
                      +||+++ ...+++|+++. +++..
T Consensus       222 ~~l~s~-~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          222 AFLASG-SCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHHHTT-SCGGGTTCEEEESTTCC
T ss_pred             HHHhCc-ccCCccCCEEEECCCch
Confidence            999754 56899999995 44443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.93  E-value=9.9e-26  Score=182.71  Aligned_cols=177  Identities=23%  Similarity=0.238  Sum_probs=132.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCE-EEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh-hhH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAK-VIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF-KSI   88 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v   88 (222)
                      +|++|+++||||++|||++++++|+++|++ |++++|+.+.  +..+.+....        ++.++.++.+|+++. +++
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~--------~~~~~~~~~~D~~~~~~~~   71 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAIN--------PKVNITFHTYDVTVPVAES   71 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHC--------TTSEEEEEECCTTSCHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhC--------CCceEEEEEEecCCChHHH
Confidence            478999999999999999999999999995 9999998742  2223333321        345889999999998 999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH-------------------------h--h----h---------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI-------------------------L--S----N---------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~-------------------------l--~----~---------------------  116 (222)
                      +++++.+.+.++++|++|||||+..                         +  .    .                     
T Consensus        72 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  151 (254)
T 1sby_A           72 KKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHH
Confidence            9999999999999999999998643                         0  0    0                     


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                            +..+++.++.+++++||+||+|+||+++|+|............. ...........+|+|+|+.+++++.    
T Consensus       152 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dvA~~i~~~~~----  226 (254)
T 1sby_A          152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPR-VAELLLSHPTQTSEQCGQNFVKAIE----  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTT-HHHHHTTSCCEEHHHHHHHHHHHHH----
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHH-HHHHHhcCCCCCHHHHHHHHHHHHH----
Confidence                  78889999998887899999999999999987653210000000 0111111114589999999999973    


Q ss_pred             ccccccccc-ccc
Q psy7936         191 AKETGLYYS-DYK  202 (222)
Q Consensus       191 ~~~~G~~i~-~~~  202 (222)
                      .+++|+.+. +++
T Consensus       227 ~~~~G~~~~v~gG  239 (254)
T 1sby_A          227 ANKNGAIWKLDLG  239 (254)
T ss_dssp             HCCTTCEEEEETT
T ss_pred             cCCCCCEEEEeCC
Confidence            467999994 444

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.93  E-value=9.2e-26  Score=203.60  Aligned_cols=164  Identities=22%  Similarity=0.229  Sum_probs=131.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh---------hHHHHHHHHHHHhhhhhcccCCCCCeEEEEec
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV---------EKAETTASEIRKHFEVATSEDKKPGEVLIKKL   80 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (222)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.         +.++++.+++...          +.++.   +
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~----------g~~~~---~   70 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN----------GGVAV---A   70 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT----------TCEEE---E
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc----------CCeEE---E
Confidence            457899999999999999999999999999999998765         6677777777653          33433   5


Q ss_pred             CCCChhhHHHHHHHHHhhccceeEEEechhhHH----------------hhh----------------------------
Q psy7936          81 DLASFKSIRDCAQDINQTEANVHILINNAVYCI----------------LSN----------------------------  116 (222)
Q Consensus        81 D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~----------------------------  116 (222)
                      |++|.++++++++.+.+.++++|+||||||+..                -+|                            
T Consensus        71 d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS  150 (604)
T 2et6_A           71 DYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS  150 (604)
T ss_dssp             ECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             EcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            888888899999999999999999999999754                000                            


Q ss_pred             -------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHH
Q psy7936         117 -------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 -------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~  177 (222)
                                         +.+|+++|+.|++++||+||+|+|| ++|+|.......          ....  ..+|+++
T Consensus       151 ~ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~----------~~~~--~~~pe~v  217 (604)
T 2et6_A          151 PAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPP----------PMLE--KLGPEKV  217 (604)
T ss_dssp             HHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCH----------HHHT--TCSHHHH
T ss_pred             HHHcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCCh----------hhhc--cCCHHHH
Confidence                               8999999999999999999999998 688886543210          0111  4699999


Q ss_pred             HHHHHHHhcCCCcccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      |..++||+++ . .++||+.+..+
T Consensus       218 A~~v~~L~s~-~-~~itG~~~~vd  239 (604)
T 2et6_A          218 APLVLYLSSA-E-NELTGQFFEVA  239 (604)
T ss_dssp             HHHHHHHTSS-S-CCCCSCEEEEE
T ss_pred             HHHHHHHhCC-c-ccCCCCEEEEC
Confidence            9999999754 4 79999999443

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.93  E-value=5.5e-26  Score=182.75  Aligned_cols=175  Identities=22%  Similarity=0.215  Sum_probs=138.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEE-EecCCCChhhHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLI-KKLDLASFKSIRDC   91 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~   91 (222)
                      +|+++||||++|||++++++|+++|++|+++ +|+.+.++++.+.+...          +.++.+ +.+|+++.++++++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~   70 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR----------GSPLVAVLGANLLEAEAATAL   70 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT----------TCSCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc----------CCceEEEEeccCCCHHHHHHH
Confidence            4789999999999999999999999999998 89998888887777653          345566 89999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH----------------hhh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI----------------LSN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------------  116 (222)
                      ++++.+.++++|++|||||...                -+|                                       
T Consensus        71 ~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  150 (245)
T 2ph3_A           71 VHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQA  150 (245)
T ss_dssp             HHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBH
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCc
Confidence            9999999999999999998642                000                                       


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                              +..+++.++.++.++||++++|+||++.|++....... .........+..+  ..+|+|+|+.+.+++.+ 
T Consensus       151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--~~~~~dva~~~~~l~~~-  226 (245)
T 2ph3_A          151 NYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQE-VKEAYLKQIPAGR--FGRPEEVAEAVAFLVSE-  226 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH-HHHHHHHTCTTCS--CBCHHHHHHHHHHHTSG-
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHH-HHHHHHhcCCCCC--CcCHHHHHHHHHHHhCc-
Confidence                    67789999999998999999999999999987653211 1011001112222  57999999999999644 


Q ss_pred             Cccccccccccccc
Q psy7936         189 GAAKETGLYYSDYK  202 (222)
Q Consensus       189 ~~~~~~G~~i~~~~  202 (222)
                      ...+++|+.+..++
T Consensus       227 ~~~~~~G~~~~v~g  240 (245)
T 2ph3_A          227 KAGYITGQTLCVDG  240 (245)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             ccccccCCEEEECC
Confidence            45789999985444

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.93  E-value=1.1e-25  Score=181.36  Aligned_cols=159  Identities=11%  Similarity=-0.021  Sum_probs=129.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .++|++|||||++|||++++++|+++|++|++++|+.+...                    ....++.+|+++.++++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------------------~~~~~~~~D~~~~~~v~~~   64 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------------------SASVIVKMTDSFTEQADQV   64 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------------------SEEEECCCCSCHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc--------------------CCcEEEEcCCCCHHHHHHH
Confidence            36899999999999999999999999999999999876421                    1456789999999999999


Q ss_pred             HHHHHhhc--cceeEEEechhhHH-----------------hhh------------------------------------
Q psy7936          92 AQDINQTE--ANVHILINNAVYCI-----------------LSN------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~--~~id~li~~ag~~~-----------------l~~------------------------------------  116 (222)
                      ++++.+.+  +++|++|||||+..                 -+|                                    
T Consensus        65 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  144 (241)
T 1dhr_A           65 TAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM  144 (241)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB
T ss_pred             HHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCc
Confidence            99999988  79999999999631                 000                                    


Q ss_pred             ---------HHHHHHHHHhhcC--CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ---------NILFYSILFYAIP--GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ---------~~~~~~~la~~~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                               +..+++.++.+++  ++||+||+|+||+++|+|..........         .+  ..+|+|+|+.+++++
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---------~~--~~~~~~vA~~v~~l~  213 (241)
T 1dhr_A          145 IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADF---------SS--WTPLEFLVETFHDWI  213 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCG---------GG--SEEHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcchhh---------cc--CCCHHHHHHHHHHHh
Confidence                     7889999999998  8999999999999999987643211110         11  468999999999997


Q ss_pred             cCCCccccccccccccc
Q psy7936         186 LDEGAAKETGLYYSDYK  202 (222)
Q Consensus       186 ~~~~~~~~~G~~i~~~~  202 (222)
                       ++...+++|+++..++
T Consensus       214 -~~~~~~~~G~~~~v~g  229 (241)
T 1dhr_A          214 -TGNKRPNSGSLIQVVT  229 (241)
T ss_dssp             -TTTTCCCTTCEEEEEE
T ss_pred             -cCCCcCccceEEEEeC
Confidence             4557899999995444

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.93  E-value=4.1e-25  Score=185.23  Aligned_cols=163  Identities=20%  Similarity=0.254  Sum_probs=132.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEE---------eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEec
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMA---------CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKL   80 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~---------~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (222)
                      ++|++|++|||||++|||+++|+.|+++|++|+++         +|+.+.++++.++++..          +..+   .+
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~----------~~~~---~~   71 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR----------GGKA---VA   71 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT----------TCEE---EE
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh----------CCeE---EE
Confidence            46889999999999999999999999999999996         45778888888877653          2232   47


Q ss_pred             CCCChhhHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------
Q psy7936          81 DLASFKSIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------  116 (222)
Q Consensus        81 D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------  116 (222)
                      |+++.++++++++.+.+.++++|+||||||+...                +|                            
T Consensus        72 D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS  151 (319)
T 1gz6_A           72 NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS  151 (319)
T ss_dssp             ECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             eCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            9999999999999999999999999999996430                00                            


Q ss_pred             -------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHH
Q psy7936         117 -------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 -------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~  177 (222)
                                         +..|++.++.+++++||+||+|+||++ |+|.....+          .....  ..+|+|+
T Consensus       152 ~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~----------~~~~~--~~~p~dv  218 (319)
T 1gz6_A          152 ASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP----------EDLVE--ALKPEYV  218 (319)
T ss_dssp             HHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC----------HHHHH--HSCGGGT
T ss_pred             hhhccCCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC----------hhhhc--cCCHHHH
Confidence                               788999999999999999999999998 877653211          01112  5799999


Q ss_pred             HHHHHHHhcCCCccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSD  200 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~  200 (222)
                      |..++||++++  .+++|++|..
T Consensus       219 A~~~~~l~s~~--~~~tG~~~~v  239 (319)
T 1gz6_A          219 APLVLWLCHES--CEENGGLFEV  239 (319)
T ss_dssp             HHHHHHHTSTT--CCCCSCEEEE
T ss_pred             HHHHHHHhCch--hhcCCCEEEE
Confidence            99999997553  5789999943

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.93  E-value=4.2e-26  Score=181.65  Aligned_cols=154  Identities=20%  Similarity=0.115  Sum_probs=120.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      |+++++|++|||||++|||+++|+.|+++|++|++++|+.+                              +|+++.+++
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------------------------~D~~~~~~v   50 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------------------------LDISDEKSV   50 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------------------------CCTTCHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------------------------cCCCCHHHH
Confidence            34578999999999999999999999999999999998654                              799999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH-----------------hhh-----------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI-----------------LSN-----------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~-----------------l~~-----------------------------------  116 (222)
                      +++++++    +++|++|||||...                 -+|                                   
T Consensus        51 ~~~~~~~----g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  126 (223)
T 3uce_A           51 YHYFETI----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN  126 (223)
T ss_dssp             HHHHHHH----CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHh----CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC
Confidence            9988765    89999999999762                 000                                   


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc---chhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP---GARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                +..+++.++.|+++  |+||+|+||+++|+|..........   .......|+++  ..+|+|+|+.+++
T Consensus       127 ~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dvA~~~~~  202 (223)
T 3uce_A          127 TYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGK--VGEASDIAMAYLF  202 (223)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCS--CBCHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCC--ccCHHHHHHHHHH
Confidence                      78999999999987  9999999999999998765432111   11112223334  6799999999999


Q ss_pred             HhcCCCcccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ++.   ..+++|+.|..++.
T Consensus       203 l~~---~~~~tG~~i~vdgG  219 (223)
T 3uce_A          203 AIQ---NSYMTGTVIDVDGG  219 (223)
T ss_dssp             HHH---CTTCCSCEEEESTT
T ss_pred             Hcc---CCCCCCcEEEecCC
Confidence            985   36899999954443

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.93  E-value=9.4e-25  Score=179.46  Aligned_cols=163  Identities=20%  Similarity=0.168  Sum_probs=129.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.+             +.++.++++|+++.++++++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~~~~~   69 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-------------PDRAEAISLDVTDGERIDVV   69 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-------------TTTEEEEECCTTCHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------------cCCceEEEeeCCCHHHHHHH
Confidence            46899999999999999999999999999999999998877665432             45788999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHh----------------hh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCIL----------------SN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l----------------~~---------------------------------------  116 (222)
                      ++++.+.++++|++|||||....                +|                                       
T Consensus        70 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  149 (281)
T 3m1a_A           70 AADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFS  149 (281)
T ss_dssp             HHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCH
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCch
Confidence            99999999999999999997530                00                                       


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC---C---CCcchhhhH------HHHHHHhcCChHH
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD---T---YFPGARTLG------RVLMWWWMKTPEQ  176 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~---~---~~~~~~~~~------~~~~~~~~~~p~e  176 (222)
                              +..+++.++.+++++||+||+|+||+++|++......   .   .+.......      .+..+  ..+|+|
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d  227 (281)
T 3m1a_A          150 AYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQ--PGDPAK  227 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-------CBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCC--CCCHHH
Confidence                    7889999999999999999999999999999764321   1   111111011      12223  689999


Q ss_pred             HHHHHHHHhcCCC
Q psy7936         177 GAQTTLHCALDEG  189 (222)
Q Consensus       177 ~a~~i~~l~~~~~  189 (222)
                      +|+.+++++..+.
T Consensus       228 va~a~~~~~~~~~  240 (281)
T 3m1a_A          228 AAAAIRLALDTEK  240 (281)
T ss_dssp             HHHHHHHHHHSSS
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999986653

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.92  E-value=6.1e-26  Score=189.78  Aligned_cols=184  Identities=18%  Similarity=0.130  Sum_probs=128.7

Q ss_pred             CCCCCCEEEEecC--CCchHHHHHHHHHhCCCEEEEEeCChhH------HH-HHHHHHHHhhhhhcccCCCC----CeEE
Q psy7936          10 SRLDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEK------AE-TTASEIRKHFEVATSEDKKP----GEVL   76 (222)
Q Consensus        10 ~~~~~k~~lVtGa--s~giG~~~a~~l~~~g~~v~~~~r~~~~------~~-~~~~~i~~~~~~~~~~~~~~----~~~~   76 (222)
                      ++|++|++|||||  ++|||+++|+.|+++|++|++++|+...      .. +..+.+....       .+.    ....
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~   77 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP-------DGSLIEFAGVY   77 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCT-------TSCBCCCSCEE
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhh-------ccccccccccc
Confidence            4578999999999  8999999999999999999999987521      00 0011111110       001    1222


Q ss_pred             E----------EecCCCC--------hhhHHHHHHHHHhhccceeEEEechhhHH-----h-------------hh----
Q psy7936          77 I----------KKLDLAS--------FKSIRDCAQDINQTEANVHILINNAVYCI-----L-------------SN----  116 (222)
Q Consensus        77 ~----------~~~D~~~--------~~~v~~~~~~i~~~~~~id~li~~ag~~~-----l-------------~~----  116 (222)
                      .          +.+|+++        .++++++++.+.+.++++|+||||||+..     +             +|    
T Consensus        78 ~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~  157 (315)
T 2o2s_A           78 PLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSF  157 (315)
T ss_dssp             ECCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHH
T ss_pred             cccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHH
Confidence            2          2334443        66899999999999999999999998541     0             00    


Q ss_pred             ------------------------------------------HHHHHHHHHhhcCC-CCeEEEEEeCCcccCCcCCCCCC
Q psy7936         117 ------------------------------------------NILFYSILFYAIPG-KNVNVYAVHPGIVKTELGRYMDD  153 (222)
Q Consensus       117 ------------------------------------------~~~~~~~la~~~~~-~gI~v~~v~PG~v~T~~~~~~~~  153 (222)
                                                                +..|+++++.|+++ +||+||+|+||+++|+|......
T Consensus       158 ~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~  237 (315)
T 2o2s_A          158 VSLLQHFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGK  237 (315)
T ss_dssp             HHHHHHHSTTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTC
T ss_pred             HHHHHHHHHHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccc
Confidence                                                      78899999999985 89999999999999998764331


Q ss_pred             CC---Ccchh----hhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         154 TY---FPGAR----TLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       154 ~~---~~~~~----~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ..   +....    ....|+++  ..+|+|+|+.++||+ ++...++||++|..++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~p~~r--~~~pedvA~~v~~L~-s~~~~~itG~~i~vdGG  291 (315)
T 2o2s_A          238 SGEKSFIDYAIDYSYNNAPLRR--DLHSDDVGGAALFLL-SPLARAVSGVTLYVDNG  291 (315)
T ss_dssp             SSSSCHHHHHHHHHHHHSSSCC--CCCHHHHHHHHHHHT-SGGGTTCCSCEEEESTT
T ss_pred             cccchhHHHHHHHHhccCCCCC--CCCHHHHHHHHHHHh-CchhccCcCCEEEECCC
Confidence            11   11110    01123444  679999999999996 45678999999954443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.1e-24  Score=178.38  Aligned_cols=158  Identities=23%  Similarity=0.267  Sum_probs=134.0

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..++++|++|||||++|||+++++.|++.|++|++++|+.+.++++.++++..          +.++.++.+|+++.+++
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dl~~~~~v   95 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL----------GAKVHTFVVDCSNREDI   95 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc----------CCeEEEEEeeCCCHHHH
Confidence            35688999999999999999999999999999999999999888888877653          45789999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      +++++.+.+.++++|++|||||+...                +|                                    
T Consensus        96 ~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~  175 (272)
T 1yb1_A           96 YSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP  175 (272)
T ss_dssp             HHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH
T ss_pred             HHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC
Confidence            99999999999999999999986430                00                                    


Q ss_pred             -----------HHHHHHHHHhhcC---CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIP---GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -----------~~~~~~~la~~~~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                 +..+++.++.++.   +.||+||+|+||+++|+|...           ...+..+  ..+|+|+|+.++
T Consensus       176 ~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~~~--~~~~~dva~~i~  242 (272)
T 1yb1_A          176 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----------PSTSLGP--TLEPEEVVNRLM  242 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----------THHHHCC--CCCHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-----------ccccccC--CCCHHHHHHHHH
Confidence                       6788999999986   679999999999999998542           1122333  689999999999


Q ss_pred             HHhcCCC
Q psy7936         183 HCALDEG  189 (222)
Q Consensus       183 ~l~~~~~  189 (222)
                      +++..+.
T Consensus       243 ~~~~~~~  249 (272)
T 1yb1_A          243 HGILTEQ  249 (272)
T ss_dssp             HHHHTTC
T ss_pred             HHHHcCC
Confidence            9986654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.92  E-value=4.6e-25  Score=177.49  Aligned_cols=172  Identities=22%  Similarity=0.250  Sum_probs=131.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+++            +  .+.++++|+++.++++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~--~~~~~~~D~~~~~~~~   68 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------------P--GIEPVCVDLGDWEATE   68 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------------T--TCEEEECCTTCHHHHH
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------------C--CCCEEEEeCCCHHHHH
Confidence            4578999999999999999999999999999999999988776655432            1  2345699999999998


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++    .++++|++|||||....                +|                                     
T Consensus        69 ~~~~----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  144 (244)
T 3d3w_A           69 RALG----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT  144 (244)
T ss_dssp             HHHT----TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT
T ss_pred             HHHH----HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC
Confidence            8776    45789999999986420                00                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                 +..+++.++.+++++||+||+|+||++.|++....... ..........|.++  ..+|+|+|+.++++
T Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l  222 (244)
T 3d3w_A          145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGK--FAEVEHVVNAILFL  222 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCS--CBCHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCC--CcCHHHHHHHHHHH
Confidence                       78899999999998999999999999999987532111 11111111123333  67999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      +. +...+++|+.+..++
T Consensus       223 ~~-~~~~~~~G~~~~v~g  239 (244)
T 3d3w_A          223 LS-DRSGMTTGSTLPVEG  239 (244)
T ss_dssp             HS-GGGTTCCSCEEEEST
T ss_pred             cC-ccccCCCCCEEEECC
Confidence            74 445689999885443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.92  E-value=4.1e-25  Score=199.38  Aligned_cols=163  Identities=23%  Similarity=0.206  Sum_probs=127.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+|+||++|||||++|||+++|+.|++.|++|++.+|..  ++++.+++...          +.++..+.+|++  .+.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~----------g~~~~~~~~Dv~--~~~~  383 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA----------GGEAWPDQHDVA--KDSE  383 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT----------TCEEEEECCCHH--HHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc----------CCeEEEEEcChH--HHHH
Confidence            468899999999999999999999999999999998742  34555666542          557888899994  4567


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----------------hhh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----------------LSN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----------------l~~-------------------------------------  116 (222)
                      ++++.+.+.++++|+||||||+..                -+|                                     
T Consensus       384 ~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~  463 (604)
T 2et6_A          384 AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFG  463 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC
Confidence            788888888999999999999754                000                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..|+++|+.|++++||+||+|+||+ +|+|.......+.          ..  ..+|+|+|..+.||++
T Consensus       464 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~~----------~~--~~~pe~vA~~v~~L~s  530 (604)
T 2et6_A          464 QANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQD----------KN--LYHADQVAPLLVYLGT  530 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------------CC--SSCGGGTHHHHHHTTS
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchhh----------cc--CCCHHHHHHHHHHHhC
Confidence                      89999999999999999999999996 9999764321110          01  4689999999999964


Q ss_pred             CCCcccccccccccc
Q psy7936         187 DEGAAKETGLYYSDY  201 (222)
Q Consensus       187 ~~~~~~~~G~~i~~~  201 (222)
                       +... +||++|..+
T Consensus       531 -~~~~-itG~~~~vd  543 (604)
T 2et6_A          531 -DDVP-VTGETFEIG  543 (604)
T ss_dssp             -TTCC-CCSCEEEEE
T ss_pred             -CccC-CCCcEEEEC
Confidence             4566 999999543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.92  E-value=1.6e-25  Score=180.61  Aligned_cols=172  Identities=16%  Similarity=0.045  Sum_probs=115.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|++|++|||||++|||+++|++|++ |+.|++++|+.+.++++.+               ..++.++.+|+++..+ .+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~---------------~~~~~~~~~D~~~~~~-~~   64 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE---------------IEGVEPIESDIVKEVL-EE   64 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT---------------STTEEEEECCHHHHHH-TS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh---------------hcCCcceecccchHHH-HH
Confidence            46799999999999999999999998 8999999999987765542               1257889999998876 44


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      .+....+.++++|++|||||+...                +|                                      
T Consensus        65 ~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  144 (245)
T 3e9n_A           65 GGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNT  144 (245)
T ss_dssp             SSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CH
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCch
Confidence            444555677899999999998640                00                                      


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                              +..++++++.+++++||+||+|+||+++|+|.........     ...+..+  ..+|+|+|+.+++++..+
T Consensus       145 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-----~~~~~~~--~~~p~dvA~~i~~l~~~~  217 (245)
T 3e9n_A          145 IYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQG-----TNFRPEI--YIEPKEIANAIRFVIDAG  217 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------CCGG--GSCHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhh-----ccccccc--CCCHHHHHHHHHHHHcCC
Confidence                    7889999999999999999999999999999876543211     0111122  689999999999998776


Q ss_pred             Cccccccccccccccccc
Q psy7936         189 GAAKETGLYYSDYKVAKS  206 (222)
Q Consensus       189 ~~~~~~G~~i~~~~~~~~  206 (222)
                      ....+.+-.+.......+
T Consensus       218 ~~~~~~~i~~~p~~e~~~  235 (245)
T 3e9n_A          218 ETTQITNVDVRPRIELAD  235 (245)
T ss_dssp             TTEEEEEEEEEEC-----
T ss_pred             CccceeeeEEEecccccc
Confidence            655555555544443333

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.92  E-value=1.1e-24  Score=177.43  Aligned_cols=166  Identities=20%  Similarity=0.315  Sum_probs=133.5

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCC---CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCC
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIG---AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLA   83 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~   83 (222)
                      ....++++|++|||||++|||++++++|++.|   ++|++++|+.+..+.+ +.+...          +.++.++.+|++
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~----------~~~~~~~~~Dl~   82 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN----------HSNIHILEIDLR   82 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH----------CTTEEEEECCTT
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc----------CCceEEEEecCC
Confidence            33456789999999999999999999999999   9999999998766544 333322          447889999999


Q ss_pred             ChhhHHHHHHHHHhhcc--ceeEEEechhhHH----------------------------------h---------h---
Q psy7936          84 SFKSIRDCAQDINQTEA--NVHILINNAVYCI----------------------------------L---------S---  115 (222)
Q Consensus        84 ~~~~v~~~~~~i~~~~~--~id~li~~ag~~~----------------------------------l---------~---  115 (222)
                      +.++++++++.+.+.++  ++|+||||||+..                                  +         .   
T Consensus        83 ~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~  162 (267)
T 1sny_A           83 NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMG  162 (267)
T ss_dssp             CGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSS
T ss_pred             ChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhccccccccccc
Confidence            99999999999998888  8999999998532                                  0         0   


Q ss_pred             --h------------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhH
Q psy7936         116 --N------------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLG  163 (222)
Q Consensus       116 --~------------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  163 (222)
                        .                              +..+++.++.+++++||+|++|+||+++|+|.....           
T Consensus       163 ~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------  231 (267)
T 1sny_A          163 VGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA-----------  231 (267)
T ss_dssp             TTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC-----------
T ss_pred             CCCceEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCCC-----------
Confidence              1                              567888888998889999999999999999975422           


Q ss_pred             HHHHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         164 RVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       164 ~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                             ..+|+++|+.+++++... ...++|+++..++
T Consensus       232 -------~~~~~~~a~~~~~~~~~~-~~~~~G~~~~~~g  262 (267)
T 1sny_A          232 -------PLDVPTSTGQIVQTISKL-GEKQNGGFVNYDG  262 (267)
T ss_dssp             -------SBCHHHHHHHHHHHHHHC-CGGGTTCEECTTS
T ss_pred             -------CCCHHHHHHHHHHHHHhc-CcCCCCcEEccCC
Confidence                   579999999999997553 5689999996544

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.92  E-value=2.8e-25  Score=200.94  Aligned_cols=170  Identities=21%  Similarity=0.207  Sum_probs=119.2

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC---------ChhHHHHHHHHHHHhhhhhcccCCCCCeEE
Q psy7936           6 AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR---------DVEKAETTASEIRKHFEVATSEDKKPGEVL   76 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   76 (222)
                      .....+|+||++|||||++|||+++|+.|+++|++|++++|         +.+.++++.++++..          +..+ 
T Consensus        11 ~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~----------~~~~-   79 (613)
T 3oml_A           11 SDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA----------GGEA-   79 (613)
T ss_dssp             ----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT----------TCCE-
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh----------CCeE-
Confidence            33456789999999999999999999999999999999988         677788888887664          3333 


Q ss_pred             EEecCCCChhhHHHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------
Q psy7936          77 IKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------  116 (222)
Q Consensus        77 ~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------  116 (222)
                        .+|+++.+++.++++.+.+.++++|+||||||+...                +|                        
T Consensus        80 --~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV  157 (613)
T 3oml_A           80 --VADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRII  157 (613)
T ss_dssp             --EECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             --EEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence              379999999999999999999999999999997640                00                        


Q ss_pred             -----------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCC
Q psy7936         117 -----------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKT  173 (222)
Q Consensus       117 -----------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (222)
                                             +..|+++|+.|++++||+||+|+||++ |+|.......          ...+  ..+
T Consensus       158 ~isS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~----------~~~~--~~~  224 (613)
T 3oml_A          158 MTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPD----------ILFN--ELK  224 (613)
T ss_dssp             EECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH----------HHHT--TCC
T ss_pred             EECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccch----------hhhh--cCC
Confidence                                   899999999999999999999999975 6666543211          1122  579


Q ss_pred             hHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         174 PEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       174 p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |+|+|..++||+++.  .++||++|..++.
T Consensus       225 pedvA~~v~~L~s~~--~~~tG~~i~vdGG  252 (613)
T 3oml_A          225 PKLIAPVVAYLCHES--CEDNGSYIESAAG  252 (613)
T ss_dssp             GGGTHHHHHHTTSTT--CCCCSCEEEEETT
T ss_pred             HHHHHHHHHHhcCCC--cCCCceEEEECCC
Confidence            999999999997554  7999999954433

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.92  E-value=1.8e-24  Score=173.09  Aligned_cols=160  Identities=23%  Similarity=0.227  Sum_probs=123.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+              .++.++.+|+++.+++++++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------~~~~~~~~D~~~~~~~~~~~   69 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL--------------EGALPLPGDVREEGDWARAV   69 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS--------------TTCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------hhceEEEecCCCHHHHHHHH
Confidence            4689999999999999999999999999999999988776655432              15678899999999999999


Q ss_pred             HHHHhhccceeEEEechhhHH----------------hhh----------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCI----------------LSN----------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~----------------l~~----------------------------------------  116 (222)
                      +.+.+.++++|++|||||...                -+|                                        
T Consensus        70 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  149 (234)
T 2ehd_A           70 AAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAA  149 (234)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCch
Confidence            999999999999999998532                000                                        


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                             +..+++.++.+++++||++++|+||+++|+|......        .   . .  +.+|+|+|+.+++++.+ .
T Consensus       150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~---~-~--~~~~~dvA~~~~~l~~~-~  214 (234)
T 2ehd_A          150 YNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPG--------Q---A-W--KLKPEDVAQAVLFALEM-P  214 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------------CCHHHHHHHHHHHHHS-C
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccccc--------c---c-C--CCCHHHHHHHHHHHhCC-C
Confidence                   6778899999999999999999999999998764321        0   0 1  46999999999999765 4


Q ss_pred             cccccccccccc
Q psy7936         190 AAKETGLYYSDY  201 (222)
Q Consensus       190 ~~~~~G~~i~~~  201 (222)
                      ..+++|+.+...
T Consensus       215 ~~~~~g~~~~~~  226 (234)
T 2ehd_A          215 GHAMVSEIELRP  226 (234)
T ss_dssp             CSSCCCEEECCC
T ss_pred             cccccceEEEee
Confidence            578999876443

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.91  E-value=4.9e-25  Score=178.48  Aligned_cols=167  Identities=22%  Similarity=0.163  Sum_probs=124.4

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ....+++|++|||||++|||+++++.|+++|++|++++|+.+..++    +             + ++.++ +|+  .++
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----~-------------~-~~~~~-~D~--~~~   71 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----S-------------G-HRYVV-CDL--RKD   71 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----T-------------C-SEEEE-CCT--TTC
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh----h-------------C-CeEEE-eeH--HHH
Confidence            3456899999999999999999999999999999999999743221    1             1 45666 999  567


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHh----------------hh-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCIL----------------SN-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------  116 (222)
                      ++++++.+.    ++|++|||||....                +|                                   
T Consensus        72 ~~~~~~~~~----~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  147 (249)
T 1o5i_A           72 LDLLFEKVK----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI  147 (249)
T ss_dssp             HHHHHHHSC----CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHhc----CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC
Confidence            888777663    89999999986430                00                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcc-hhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPG-ARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..+++.++.+++++||+||+|+||+++|+|....... ... ......|+++  +.+|+|+|+.++|
T Consensus       148 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~p~~~--~~~~~dvA~~i~~  224 (249)
T 1o5i_A          148 ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE-EKKKQVESQIPMRR--MAKPEEIASVVAF  224 (249)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH-HHHHHHHTTSTTSS--CBCHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchh-hHHHHHHhcCCCCC--CcCHHHHHHHHHH
Confidence                        78899999999999999999999999999987543211 100 1101123333  6799999999999


Q ss_pred             HhcCCCcccccccccccccc
Q psy7936         184 CALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       184 l~~~~~~~~~~G~~i~~~~~  203 (222)
                      |++ +...+++|+.+..++.
T Consensus       225 l~s-~~~~~~tG~~~~vdgG  243 (249)
T 1o5i_A          225 LCS-EKASYLTGQTIVVDGG  243 (249)
T ss_dssp             HHS-GGGTTCCSCEEEESTT
T ss_pred             HcC-ccccCCCCCEEEECCC
Confidence            974 4567999999954443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.91  E-value=5.3e-24  Score=178.80  Aligned_cols=129  Identities=22%  Similarity=0.310  Sum_probs=105.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC-----hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-----VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      .|++|++|||||++|||+++++.|++.|++|++++|+     .+.++++.+.+...          +.++.++++|+++.
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~----------~~~~~~~~~Dvtd~   71 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN----------DVDLRTLELDVQSQ   71 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH----------TCCEEEEECCTTCH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc----------CCcEEEEEeecCCH
Confidence            3678999999999999999999999999999988775     45666666666543          56899999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH----------------hhh---------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI----------------LSN---------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------  116 (222)
                      +++.++++.+.+.++++|+||||||+..                -+|                                 
T Consensus        72 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~  151 (324)
T 3u9l_A           72 VSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAG  151 (324)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhcc
Confidence            9999999999999999999999999643                000                                 


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCC
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGR  149 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~  149 (222)
                                     +..++++++.|++++||+||+|+||+++|++..
T Consensus       152 ~~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~  199 (324)
T 3u9l_A          152 GTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNH  199 (324)
T ss_dssp             CCCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC------
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchh
Confidence                           789999999999999999999999999988754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=4.4e-24  Score=171.70  Aligned_cols=159  Identities=27%  Similarity=0.309  Sum_probs=122.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |++|+++||||++|||+++++.|+++|  ++|++++|+.+.++++.+.             .+.++.++.+|+++.++++
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~-------------~~~~~~~~~~D~~~~~~~~   67 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-------------KDSRVHVLPLTVTCDKSLD   67 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-------------CCTTEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc-------------cCCceEEEEeecCCHHHHH
Confidence            467999999999999999999999999  9999999998876544211             1457899999999999999


Q ss_pred             HHHHHHHhhcc--ceeEEEechhhHH----------------------------------h---------h-----h---
Q psy7936          90 DCAQDINQTEA--NVHILINNAVYCI----------------------------------L---------S-----N---  116 (222)
Q Consensus        90 ~~~~~i~~~~~--~id~li~~ag~~~----------------------------------l---------~-----~---  116 (222)
                      ++++.+.+.++  ++|++|||||...                                  +         .     .   
T Consensus        68 ~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  147 (250)
T 1yo6_A           68 TFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAV  147 (250)
T ss_dssp             HHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEE
T ss_pred             HHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEE
Confidence            99999998888  9999999998532                                  0         1     1   


Q ss_pred             -------------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHH
Q psy7936         117 -------------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRV  165 (222)
Q Consensus       117 -------------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  165 (222)
                                                     +..+++.++.+++++||+|++|+||+++|+|.....             
T Consensus       148 v~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------  214 (250)
T 1yo6_A          148 ITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA-------------  214 (250)
T ss_dssp             EEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------
T ss_pred             EEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCCC-------------
Confidence                                           456778888888888999999999999999875321             


Q ss_pred             HHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         166 LMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       166 ~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                           ..+|+++|+.+++++..+ ..+++|+++..++
T Consensus       215 -----~~~~~~~a~~~~~~~~~~-~~~~~G~~~~~~g  245 (250)
T 1yo6_A          215 -----ALTVEQSTAELISSFNKL-DNSHNGRFFMRNL  245 (250)
T ss_dssp             ---------HHHHHHHHHHHTTC-CGGGTTCEEETTE
T ss_pred             -----CCCHHHHHHHHHHHHhcc-cccCCCeEEEECC
Confidence                 578999999999997554 5689999996444

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.91  E-value=2e-24  Score=173.64  Aligned_cols=172  Identities=21%  Similarity=0.253  Sum_probs=129.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+|++|++|||||++|||++++++|++.|++|++++|+.+.++++.+.+            +  .+.++.+|+++.++++
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~--~~~~~~~D~~~~~~~~   68 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------------P--GIEPVCVDLGDWDATE   68 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------------T--TCEEEECCTTCHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------------c--CCCcEEecCCCHHHHH
Confidence            4578999999999999999999999999999999999988776554321            1  2345699999999998


Q ss_pred             HHHHHHHhhccceeEEEechhhHH----------------hhh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI----------------LSN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~----------------l~~-------------------------------------  116 (222)
                      ++++    .++++|++|||||...                -+|                                     
T Consensus        69 ~~~~----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  144 (244)
T 1cyd_A           69 KALG----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP  144 (244)
T ss_dssp             HHHT----TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT
T ss_pred             HHHH----HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC
Confidence            8776    4578999999999432                000                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                 +..+++.++.+++++||++++|+||++.|++....... .+........++.+  ..+|+|+|+.++++
T Consensus       145 ~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~dva~~~~~l  222 (244)
T 1cyd_A          145 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRK--FAEVEDVVNSILFL  222 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSS--CBCHHHHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccC--CCCHHHHHHHHHHH
Confidence                       68889999999988999999999999999986532111 11111111122223  67999999999999


Q ss_pred             hcCCCccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~  202 (222)
                      +. +...+++|+.+..++
T Consensus       223 ~~-~~~~~~~G~~~~v~g  239 (244)
T 1cyd_A          223 LS-DRSASTSGGGILVDA  239 (244)
T ss_dssp             HS-GGGTTCCSSEEEEST
T ss_pred             hC-chhhcccCCEEEECC
Confidence            74 456789999985443

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.91  E-value=1.6e-24  Score=182.17  Aligned_cols=179  Identities=19%  Similarity=0.129  Sum_probs=126.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++|++|||||++|||++++++|+++|++|++++|+...+++..+.++...+.    ..++.++.++.+|+++.+++++++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~d~~~v~~~~   76 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL----ACPPGSLETLQLDVRDSKSVAAAR   76 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT----TCCTTSEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhc----cCCCCceEEEEecCCCHHHHHHHH
Confidence            3789999999999999999999999999988887655444333333221000    002457899999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHH----------------hhh----------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCI----------------LSN----------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~----------------l~~----------------------------------------  116 (222)
                      +.+.  ++++|+||||||+..                -+|                                        
T Consensus        77 ~~~~--~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~  154 (327)
T 1jtv_A           77 ERVT--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDV  154 (327)
T ss_dssp             HTCT--TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHH
T ss_pred             HHHh--cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChH
Confidence            9883  489999999998642                000                                        


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC------cch-------hhh--HHHHHHHhcCCh
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF------PGA-------RTL--GRVLMWWWMKTP  174 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~------~~~-------~~~--~~~~~~~~~~~p  174 (222)
                             +..|++.++.|++++||+||+|+||+|+|+|.........      ...       ...  ..++.+ ...+|
T Consensus       155 Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p  233 (327)
T 1jtv_A          155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFRE-AAQNP  233 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHH-HCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhh-cCCCH
Confidence                   7899999999999999999999999999999765432100      000       000  012222 13599


Q ss_pred             HHHHHHHHHHhcCC--Cccccccccc
Q psy7936         175 EQGAQTTLHCALDE--GAAKETGLYY  198 (222)
Q Consensus       175 ~e~a~~i~~l~~~~--~~~~~~G~~i  198 (222)
                      +|+|+.+++++.++  ...+++|+.+
T Consensus       234 edvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          234 EEVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHHHHcCCCCCeEEEeCchH
Confidence            99999999998763  4568898766

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.91  E-value=1.8e-23  Score=172.29  Aligned_cols=159  Identities=20%  Similarity=0.193  Sum_probs=130.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+...         +..++.++.+|+++.++++
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~v~   94 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL---------GAASAHYIAGTMEDMTFAE   94 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------TCSEEEEEECCTTCHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh---------CCCceEEEeCCCCCHHHHH
Confidence            3478999999999999999999999999999999999999998888877664         2457899999999999999


Q ss_pred             HHHHHHHhhccceeEEEec-hhhHH---------------hhh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINN-AVYCI---------------LSN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~-ag~~~---------------l~~-------------------------------------  116 (222)
                      ++++.+.+.++++|++||| +|...               -+|                                     
T Consensus        95 ~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  174 (286)
T 1xu9_A           95 QFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV  174 (286)
T ss_dssp             HHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTC
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCc
Confidence            9999999999999999999 56432               000                                     


Q ss_pred             ---------HHHHHHHHHhhc--CCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh
Q psy7936         117 ---------NILFYSILFYAI--PGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA  185 (222)
Q Consensus       117 ---------~~~~~~~la~~~--~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~  185 (222)
                               +..++++++.++  ...||+|++|+||+++|+|........      .   ..  ...+|+++|+.++..+
T Consensus       175 ~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~------~---~~--~~~~~~~vA~~i~~~~  243 (286)
T 1xu9_A          175 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI------V---HM--QAAPKEECALEIIKGG  243 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG------G---GG--GCBCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc------c---cC--CCCCHHHHHHHHHHHH
Confidence                     688899999998  578999999999999999865321100      0   01  1579999999999987


Q ss_pred             cCC
Q psy7936         186 LDE  188 (222)
Q Consensus       186 ~~~  188 (222)
                      ..+
T Consensus       244 ~~~  246 (286)
T 1xu9_A          244 ALR  246 (286)
T ss_dssp             HTT
T ss_pred             hcC
Confidence            554

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.91  E-value=6.7e-24  Score=175.80  Aligned_cols=189  Identities=14%  Similarity=0.114  Sum_probs=127.4

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHh-hhhhcccCCCC---CeEEEEecC--
Q psy7936          10 SRLDGKTVIITGCN--TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH-FEVATSEDKKP---GEVLIKKLD--   81 (222)
Q Consensus        10 ~~~~~k~~lVtGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~~~---~~~~~~~~D--   81 (222)
                      ++|++|++|||||+  +|||+++|+.|+++|++|++++|+..... ........ .+.. .....+   .....+.+|  
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNI-FETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHH-HHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTT
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchh-hhhhhhhhHhhhh-hhhcccccccccccccccee
Confidence            35789999999999  99999999999999999999998743210 00000000 0000 000001   112333332  


Q ss_pred             ------C----CC--------hhhHHHHHHHHHhhccceeEEEechhhHH------------------hhh---------
Q psy7936          82 ------L----AS--------FKSIRDCAQDINQTEANVHILINNAVYCI------------------LSN---------  116 (222)
Q Consensus        82 ------~----~~--------~~~v~~~~~~i~~~~~~id~li~~ag~~~------------------l~~---------  116 (222)
                            +    ++        .++++++++.+.+.++++|+||||||+..                  -+|         
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                  3    22        67899999999999999999999998531                  000         


Q ss_pred             -------------------------------------HHHHHHHHHhhcCC-CCeEEEEEeCCcccCCcCCCCCCC-CCc
Q psy7936         117 -------------------------------------NILFYSILFYAIPG-KNVNVYAVHPGIVKTELGRYMDDT-YFP  157 (222)
Q Consensus       117 -------------------------------------~~~~~~~la~~~~~-~gI~v~~v~PG~v~T~~~~~~~~~-~~~  157 (222)
                                                           +..|++.++.|+++ +||+||+|+||+++|+|....... ...
T Consensus       162 ~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~  241 (297)
T 1d7o_A          162 HFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI  241 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHH
T ss_pred             HHHHHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHH
Confidence                                                 78899999999985 899999999999999997653210 000


Q ss_pred             chhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         158 GARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       158 ~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      .......|+++  ..+|+|+|+.++||+ ++...+++|+++..++.
T Consensus       242 ~~~~~~~p~~r--~~~pedvA~~v~~l~-s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          242 EYSYNNAPIQK--TLTADEVGNAAAFLV-SPLASAITGATIYVDNG  284 (297)
T ss_dssp             HHHHHHSSSCC--CBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTT
T ss_pred             HHhhccCCCCC--CCCHHHHHHHHHHHh-CccccCCCCCEEEECCC
Confidence            11101123333  679999999999996 45578999999954433

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.89  E-value=2.6e-23  Score=166.71  Aligned_cols=160  Identities=18%  Similarity=0.209  Sum_probs=125.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .                     .++.++++|+++.++++++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---------------------~~~~~~~~D~~~~~~~~~~~~   59 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---------------------EDLIYVEGDVTREEDVRRAVA   59 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---------------------SSSEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---------------------cceEEEeCCCCCHHHHHHHHH
Confidence            689999999999999999999999999999999865 1                     123688999999999999999


Q ss_pred             HHHhhccceeEEEechhhHH-------------------------------------h-------h----h---------
Q psy7936          94 DINQTEANVHILINNAVYCI-------------------------------------L-------S----N---------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~-------------------------------------l-------~----~---------  116 (222)
                      ++ +.++++|++|||||...                                     +       .    .         
T Consensus        60 ~~-~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  138 (242)
T 1uay_A           60 RA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA  138 (242)
T ss_dssp             HH-HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH
T ss_pred             HH-HhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhh
Confidence            99 77899999999998521                                     0       0    1         


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHH-HHHhcCChHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVL-MWWWMKTPEQGAQ  179 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~e~a~  179 (222)
                                      +..+++.++.+++++||+|++|+||++.|++....... .........|+ ++  +.+|+|+|+
T Consensus       139 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~dva~  215 (242)
T 1uay_A          139 FEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK-AKASLAAQVPFPPR--LGRPEEYAA  215 (242)
T ss_dssp             HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH-HHHHHHTTCCSSCS--CCCHHHHHH
T ss_pred             ccCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchh-HHHHHHhhCCCccc--CCCHHHHHH
Confidence                            67888899999998999999999999999987654311 00111011122 23  679999999


Q ss_pred             HHHHHhcCCCccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      .+++++.+   .+++|+.+..++
T Consensus       216 ~~~~l~~~---~~~~G~~~~v~g  235 (242)
T 1uay_A          216 LVLHILEN---PMLNGEVVRLDG  235 (242)
T ss_dssp             HHHHHHHC---TTCCSCEEEEST
T ss_pred             HHHHHhcC---CCCCCcEEEEcC
Confidence            99999755   588999984433

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.88  E-value=1.6e-23  Score=169.70  Aligned_cols=159  Identities=16%  Similarity=0.065  Sum_probs=109.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |++|||||++|||+++++.|+++|++|++++|+.+.++                   .    .+++|+++.++++++++.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------------~----~~~~Dl~~~~~v~~~~~~   58 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-------------------A----DLSTAEGRKQAIADVLAK   58 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------------------C----CTTSHHHHHHHHHHHHTT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-------------------c----ccccCCCCHHHHHHHHHH
Confidence            68999999999999999999999999999999875321                   0    156888888888877663


Q ss_pred             HHhhccceeEEEechhhHH-------------------------------------------h-----------------
Q psy7936          95 INQTEANVHILINNAVYCI-------------------------------------------L-----------------  114 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~-------------------------------------------l-----------------  114 (222)
                      +   .+++|+||||||+..                                           .                 
T Consensus        59 ~---~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  135 (257)
T 1fjh_A           59 C---SKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGE  135 (257)
T ss_dssp             C---TTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTC
T ss_pred             h---CCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccc
Confidence            3   378899999987542                                           1                 


Q ss_pred             -----------hh-------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhh--HHHHHH
Q psy7936         115 -----------SN-------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTL--GRVLMW  168 (222)
Q Consensus       115 -----------~~-------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~~  168 (222)
                                 ..             +..+++.++.+++++||+||+|+||+++|+|...............  ..|+++
T Consensus       136 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  215 (257)
T 1fjh_A          136 EAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGR  215 (257)
T ss_dssp             HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTS
T ss_pred             hhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCC
Confidence                       00             4567788888888899999999999999999875411111111000  123333


Q ss_pred             HhcCChHHHHHHHHHHhcCCCcccccccccc-ccc
Q psy7936         169 WWMKTPEQGAQTTLHCALDEGAAKETGLYYS-DYK  202 (222)
Q Consensus       169 ~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~-~~~  202 (222)
                        ..+|+|+|+.++++++ +...+++|+++. +++
T Consensus       216 --~~~~~dvA~~~~~l~~-~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          216 --RAEPSEMASVIAFLMS-PAASYVHGAQIVIDGG  247 (257)
T ss_dssp             --CCCTHHHHHHHHHHTS-GGGTTCCSCEEEESTT
T ss_pred             --CCCHHHHHHHHHHHhC-chhcCCcCCEEEECCC
Confidence              7899999999999974 456799999994 444

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.87  E-value=4.2e-22  Score=194.27  Aligned_cols=178  Identities=17%  Similarity=0.084  Sum_probs=134.2

Q ss_pred             CCCCCCCEEEEecCCCc-hHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           9 ASRLDGKTVIITGCNTG-IGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~g-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .+.|+||++|||||++| ||+++|+.|++.|++|+++ +|+.+.++++.+.+.....      ..+.++.++.||+++.+
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~------~~g~~v~~v~~DVsd~~  743 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYG------AKGSTLIVVPFNQGSKQ  743 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHC------CTTCEEEEEECCTTCHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhh------cCCCeEEEEEecCCCHH
Confidence            34688999999999998 9999999999999999998 6888888777777744321      02568999999999999


Q ss_pred             hHHHHHHHHHhh-----cc-ceeEEEechhhHHh-------h------------h-------------------------
Q psy7936          87 SIRDCAQDINQT-----EA-NVHILINNAVYCIL-------S------------N-------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~-----~~-~id~li~~ag~~~l-------~------------~-------------------------  116 (222)
                      +++++++.+.+.     ++ ++|+||||||+...       .            |                         
T Consensus       744 sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~I  823 (1887)
T 2uv8_A          744 DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVI  823 (1887)
T ss_dssp             HHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEE
T ss_pred             HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEE
Confidence            999999999888     66 99999999986410       0            0                         


Q ss_pred             ----------------------HHHH-HHHHHhhcCCCCeEEEEEeCCccc-CCcCCCCCCCCCcchhhhHHHHHHHhcC
Q psy7936         117 ----------------------NILF-YSILFYAIPGKNVNVYAVHPGIVK-TELGRYMDDTYFPGARTLGRVLMWWWMK  172 (222)
Q Consensus       117 ----------------------~~~~-~~~la~~~~~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (222)
                                            +..| ++.++.+++++ |+||+|+||+++ |+|.....   .........++ +  ..
T Consensus       824 VnISS~ag~~gg~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~---~~~~~~~~~pl-r--~~  896 (1887)
T 2uv8_A          824 LPMSPNHGTFGGDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN---IIAEGIEKMGV-R--TF  896 (1887)
T ss_dssp             EEECSCTTCSSCBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CC---TTHHHHHTTSC-C--CE
T ss_pred             EEEcChHhccCCCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccch---hHHHHHHhcCC-C--CC
Confidence                                  5666 78888989888 999999999999 88876421   11111011111 2  45


Q ss_pred             ChHHHHHHHHHHhcCCCcccccccccc
Q psy7936         173 TPEQGAQTTLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       173 ~p~e~a~~i~~l~~~~~~~~~~G~~i~  199 (222)
                      +|+|+|..++||+++....+++|+.+.
T Consensus       897 sPEEVA~avlfLaSd~~as~iTGq~I~  923 (1887)
T 2uv8_A          897 SQKEMAFNLLGLLTPEVVELCQKSPVM  923 (1887)
T ss_dssp             EHHHHHHHHHGGGSHHHHHHHHHSCEE
T ss_pred             CHHHHHHHHHHHhCCCccccccCcEEE
Confidence            899999999999754326799999984

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.85  E-value=4.1e-22  Score=189.51  Aligned_cols=177  Identities=17%  Similarity=0.062  Sum_probs=132.7

Q ss_pred             CCCCCCCEEEEecCCCc-hHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           9 ASRLDGKTVIITGCNTG-IGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~g-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      .++|++|++|||||++| ||+++|+.|++.|++|+++ +|+.+.++++.+++.....      ..+.++.++.||+++.+
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~------a~Ga~V~vV~~DVTD~e  544 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYG------AKGSTLIVVPFNQGSKQ  544 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTC------CTTCEEEEEECCSSSTT
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhh------cCCCeEEEEEeCCCCHH
Confidence            35688999999999998 9999999999999999998 6777766666665533210      02558999999999999


Q ss_pred             hHHHHHHHHHhh-----cc-ceeEEEechhhHHh-------h------------h-------------------------
Q psy7936          87 SIRDCAQDINQT-----EA-NVHILINNAVYCIL-------S------------N-------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~-----~~-~id~li~~ag~~~l-------~------------~-------------------------  116 (222)
                      +++++++.+.+.     ++ ++|+||||||+...       .            |                         
T Consensus       545 sVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrI  624 (1688)
T 2pff_A          545 DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVI  624 (1688)
T ss_dssp             HHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEEC
T ss_pred             HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEE
Confidence            999999999888     77 99999999996410       0            0                         


Q ss_pred             ----------------------HHHH-HHHHHhhcCCCCeEEEEEeCCccc-CCcCCCCCC-CCCcchhhhHHHHHHHhc
Q psy7936         117 ----------------------NILF-YSILFYAIPGKNVNVYAVHPGIVK-TELGRYMDD-TYFPGARTLGRVLMWWWM  171 (222)
Q Consensus       117 ----------------------~~~~-~~~la~~~~~~gI~v~~v~PG~v~-T~~~~~~~~-~~~~~~~~~~~~~~~~~~  171 (222)
                                            +..| ++.++.++++. |+||+|+||+++ |+|...... ....    ...++ +  .
T Consensus       625 VnISSiAG~~Gg~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~~~~l----~~ipl-R--~  696 (1688)
T 2pff_A          625 LPMSPNHGTFGGDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIAEGI----EKMGV-R--T  696 (1688)
T ss_dssp             CCCCSCTTTSSCBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTCSTTT----SSSSC-C--C
T ss_pred             EEEEChHhccCCchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHHHHHH----HhCCC-C--C
Confidence                                  4444 55566667766 999999999999 788654211 0111    11111 2  5


Q ss_pred             CChHHHHHHHHHHhcCCCcccccccccc
Q psy7936         172 KTPEQGAQTTLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       172 ~~p~e~a~~i~~l~~~~~~~~~~G~~i~  199 (222)
                      .+|+|+|..++||+++....+++|+.+.
T Consensus       697 ~sPEEVA~aIlFLaSd~sAs~ITGq~I~  724 (1688)
T 2pff_A          697 FSQKEMAFNLLGLLTPEVVELCQKSPVM  724 (1688)
T ss_dssp             CCCCTTHHHHHHHTSTTHHHHHTTSCCC
T ss_pred             CCHHHHHHHHHHHhCCCccccccCcEEE
Confidence            6999999999999755436799999984

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.84  E-value=3.4e-21  Score=195.36  Aligned_cols=171  Identities=16%  Similarity=0.091  Sum_probs=129.6

Q ss_pred             CCCCCEEEEecCCCc-hHHHHHHHHHhCCCEEEEEeCChhH-----HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936          11 RLDGKTVIITGCNTG-IGKVTAQTLYGIGAKVIMACRDVEK-----AETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus        11 ~~~~k~~lVtGas~g-iG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      .++||++|||||++| ||+++|+.|++.|++|++++|+.+.     ++++.+++..          .+.++..++||+++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~----------~G~~~~~v~~Dvtd 2202 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHAR----------FDATLWVVPANMAS 2202 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCC----------TTCEEEEEECCTTC
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhh----------cCCeEEEEEecCCC
Confidence            478999999999999 9999999999999999999998765     4444444432          25689999999999


Q ss_pred             hhhHHHHHHHHHh----hccceeEEEechhh----HH------------------------hhh----------------
Q psy7936          85 FKSIRDCAQDINQ----TEANVHILINNAVY----CI------------------------LSN----------------  116 (222)
Q Consensus        85 ~~~v~~~~~~i~~----~~~~id~li~~ag~----~~------------------------l~~----------------  116 (222)
                      .++++++++++.+    .+|++|+||||||+    ..                        +.+                
T Consensus      2203 ~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~ 2282 (3089)
T 3zen_D         2203 YSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERD 2282 (3089)
T ss_dssp             HHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999988    88999999999997    10                        000                


Q ss_pred             ------------------------------HHHHHHHHHhh--cCCCCeEEEEEeCCccc-CCcCCCCCCCCCcchhhhH
Q psy7936         117 ------------------------------NILFYSILFYA--IPGKNVNVYAVHPGIVK-TELGRYMDDTYFPGARTLG  163 (222)
Q Consensus       117 ------------------------------~~~~~~~la~~--~~~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~  163 (222)
                                                    +.+|+++|+.|  +++ +|+||+|+||+|+ |+|......  ..... ..
T Consensus      2283 ~g~~~~ii~~~ss~~g~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~--~~~~~-~~ 2358 (3089)
T 3zen_D         2283 IASRLHVVLPGSPNRGMFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDA--IVSAV-EE 2358 (3089)
T ss_dssp             CCCCEEEEEEECSSTTSCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTT--THHHH-GG
T ss_pred             CCceeEEEEECCcccccCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchh--HHHHH-Hh
Confidence                                          78899999999  664 6999999999998 776543221  11110 11


Q ss_pred             HHHHHHhcCChHHHHHHHHHHhcCCCccccccccc
Q psy7936         164 RVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYY  198 (222)
Q Consensus       164 ~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i  198 (222)
                      .+. +  ..+|+|+|..++|||+.......+|+.+
T Consensus      2359 ~~~-r--~~~PeEIA~avlfLaS~~a~~~~~~~p~ 2390 (3089)
T 3zen_D         2359 AGV-T--TYTTDEMAAMLLDLCTVETKVAAAGAPV 2390 (3089)
T ss_dssp             GSC-B--CEEHHHHHHHHHHTTSHHHHHHHHHSCE
T ss_pred             cCC-C--CCCHHHHHHHHHHHhChhhhhHhcCCeE
Confidence            111 1  3489999999999975543334445544

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.84  E-value=8.1e-21  Score=185.02  Aligned_cols=176  Identities=15%  Similarity=0.096  Sum_probs=132.3

Q ss_pred             CCCCCCEEEEecCCCc-hHHHHHHHHHhCCCEEEEEe-CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          10 SRLDGKTVIITGCNTG-IGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas~g-iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ++|+||++|||||++| ||+++|+.|++.|++|++++ |+.+.+.+..+.+.....      ..+.++.++.||+++.++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~------~~G~~v~~v~~DVsd~es  721 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCG------ARGSQLVVVPFNQGSKQD  721 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHC------CTTCEEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhh------ccCCeEEEEEcCCCCHHH
Confidence            4578999999999999 99999999999999999995 667777766666643320      025689999999999999


Q ss_pred             HHHHHHHHHhh---cc-ceeEEEechhhHHh-------h------------h----------------------------
Q psy7936          88 IRDCAQDINQT---EA-NVHILINNAVYCIL-------S------------N----------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~---~~-~id~li~~ag~~~l-------~------------~----------------------------  116 (222)
                      +.++++.+.+.   ++ ++|+||||||+...       .            |                            
T Consensus       722 V~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnI  801 (1878)
T 2uv9_A          722 VEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPL  801 (1878)
T ss_dssp             HHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEE
T ss_pred             HHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEE
Confidence            99999999888   88 99999999996421       0            0                            


Q ss_pred             -------------------HHHHHHHHH-hhcCCCCeEEEEEeCCccc-CCcCCCCCCCCCcchhhhHHHHHHHhcCChH
Q psy7936         117 -------------------NILFYSILF-YAIPGKNVNVYAVHPGIVK-TELGRYMDDTYFPGARTLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 -------------------~~~~~~~la-~~~~~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  175 (222)
                                         +..|++.++ .++++. |+||+|+||+++ |+|.....   .........++ +  ..+|+
T Consensus       802 SS~ag~~gg~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~~---~~~~~~~~~pl-r--~~sPe  874 (1878)
T 2uv9_A          802 SPNHGTFGNDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSANN---LVAEGVEKLGV-R--TFSQQ  874 (1878)
T ss_dssp             CSCSSSSSCCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHHH---HTHHHHHTTTC-C--CBCHH
T ss_pred             cchhhccCCchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccch---hhHHHHHhcCC-C--CCCHH
Confidence                               566665544 457766 999999999999 99875410   00000011111 2  46999


Q ss_pred             HHHHHHHHHhcCCCc-ccccccccc
Q psy7936         176 QGAQTTLHCALDEGA-AKETGLYYS  199 (222)
Q Consensus       176 e~a~~i~~l~~~~~~-~~~~G~~i~  199 (222)
                      |+|..++||+++ .. .++||+.+.
T Consensus       875 EVA~avlfLaSd-~a~s~iTGq~I~  898 (1878)
T 2uv9_A          875 EMAFNLLGLMAP-AIVNLCQSDPVF  898 (1878)
T ss_dssp             HHHHHHHHHHSH-HHHHHHTTSCEE
T ss_pred             HHHHHHHHHhCC-cccccccCcEEE
Confidence            999999999744 44 789999984

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.84  E-value=3.9e-20  Score=144.83  Aligned_cols=141  Identities=18%  Similarity=0.176  Sum_probs=113.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |+++||||++|||++++++|+++  +|++++|+.+.++++.+.+            +.   .++++|+++.+++++++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~------------~~---~~~~~D~~~~~~~~~~~~~   63 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV------------GA---RALPADLADELEAKALLEE   63 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH------------TC---EECCCCTTSHHHHHHHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc------------cC---cEEEeeCCCHHHHHHHHHh
Confidence            57999999999999999999998  9999999998777665543            11   6889999999999998876


Q ss_pred             HHhhccceeEEEechhhHHh----------------hh------------------------------------------
Q psy7936          95 INQTEANVHILINNAVYCIL----------------SN------------------------------------------  116 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l----------------~~------------------------------------------  116 (222)
                          ++++|++|||||....                +|                                          
T Consensus        64 ----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  139 (207)
T 2yut_A           64 ----AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKG  139 (207)
T ss_dssp             ----HCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHH
T ss_pred             ----cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHH
Confidence                5799999999986420                00                                          


Q ss_pred             -HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 -NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 -~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                       +..+++.++.+++++||++++|.||++.|++......           +..+  ..+|+|+|+.+++++..+.
T Consensus       140 a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~~-----------~~~~--~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          140 ALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGG-----------PPKG--ALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGGTS-----------CCTT--CBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccccCC-----------CCCC--CCCHHHHHHHHHHHHhCCC
Confidence             6788999999999999999999999999998432211           1112  6899999999999986553

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.84  E-value=2.3e-20  Score=165.86  Aligned_cols=157  Identities=11%  Similarity=0.019  Sum_probs=124.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCE-EEEE-eCC-------------hhHHHHHHHHHHHhhhhhcccCCCCCeEEE
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAK-VIMA-CRD-------------VEKAETTASEIRKHFEVATSEDKKPGEVLI   77 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~-v~~~-~r~-------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   77 (222)
                      +++++|||||++|||+++|+.|+++|+. |+++ +|+             .+.++++.++++..          +.++.+
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------g~~v~~  319 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL----------GATATV  319 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH----------TCEEEE
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc----------CCEEEE
Confidence            6789999999999999999999999995 8888 898             35566777777654          678999


Q ss_pred             EecCCCChhhHHHHHHHHHhhccceeEEEechhhHH---------------------------------h-----hh---
Q psy7936          78 KKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI---------------------------------L-----SN---  116 (222)
Q Consensus        78 ~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~---------------------------------l-----~~---  116 (222)
                      +.||++|.+++.++++.+. .++++|++|||||+..                                 +     ..   
T Consensus       320 ~~~Dvtd~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV  398 (525)
T 3qp9_A          320 VTCDLTDAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLV  398 (525)
T ss_dssp             EECCTTSHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEE
T ss_pred             EECCCCCHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEE
Confidence            9999999999999999998 7899999999999754                                 0     00   


Q ss_pred             -------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHH--HhcCChH
Q psy7936         117 -------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMW--WWMKTPE  175 (222)
Q Consensus       117 -------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~  175 (222)
                                         ...+...++.++.++||++++|+||+++|+|.....         ....+.+  ....+|+
T Consensus       399 ~~SS~a~~~g~~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~~---------~~~~~~~~g~~~l~pe  469 (525)
T 3qp9_A          399 LFSSVAAIWGGAGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTEGA---------TGERLRRLGLRPLAPA  469 (525)
T ss_dssp             EEEEGGGTTCCTTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGSSH---------HHHHHHHTTBCCBCHH
T ss_pred             EECCHHHcCCCCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccchh---------hHHHHHhcCCCCCCHH
Confidence                               456777888889999999999999999999985321         1111111  1147999


Q ss_pred             HHHHHHHHHhcCCC
Q psy7936         176 QGAQTTLHCALDEG  189 (222)
Q Consensus       176 e~a~~i~~l~~~~~  189 (222)
                      ++++.+.+++..+.
T Consensus       470 e~a~~l~~~l~~~~  483 (525)
T 3qp9_A          470 TALTALDTALGHGD  483 (525)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999976653

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.80  E-value=2.6e-19  Score=139.81  Aligned_cols=136  Identities=15%  Similarity=0.187  Sum_probs=107.5

Q ss_pred             CC-EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GK-TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k-~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +| +++||||++|||++++++|+ +|++|++++|+.+                           ++.+|+++.+++++++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------------------------~~~~D~~~~~~~~~~~   53 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------------------------DVTVDITNIDSIKKMY   53 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------------------------SEECCTTCHHHHHHHH
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------------------------ceeeecCCHHHHHHHH
Confidence            44 79999999999999999999 9999999999764                           3678999999999888


Q ss_pred             HHHHhhccceeEEEechhhHH----------------hhh----------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCI----------------LSN----------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~----------------l~~----------------------------------------  116 (222)
                      +.+    +++|++|||||...                -+|                                        
T Consensus        54 ~~~----~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  129 (202)
T 3d7l_A           54 EQV----GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAA  129 (202)
T ss_dssp             HHH----CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHh----CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCccHHHH
Confidence            765    78999999998542                000                                        


Q ss_pred             -----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcc
Q psy7936         117 -----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAA  191 (222)
Q Consensus       117 -----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~  191 (222)
                           +..+++.++.++ ++||++++|.||++.|++......          .+...  ..+|+|+|+.+++++ .   .
T Consensus       130 ~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~~~----------~~~~~--~~~~~dva~~~~~~~-~---~  192 (202)
T 3d7l_A          130 MANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLEPF----------FEGFL--PVPAAKVARAFEKSV-F---G  192 (202)
T ss_dssp             HHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHHGGG----------STTCC--CBCHHHHHHHHHHHH-H---S
T ss_pred             HHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhhhhh----------ccccC--CCCHHHHHHHHHHhh-h---c
Confidence                 677888888888 789999999999999997532110          01111  679999999998886 2   4


Q ss_pred             ccccccc
Q psy7936         192 KETGLYY  198 (222)
Q Consensus       192 ~~~G~~i  198 (222)
                      +++|+.+
T Consensus       193 ~~~G~~~  199 (202)
T 3d7l_A          193 AQTGESY  199 (202)
T ss_dssp             CCCSCEE
T ss_pred             cccCceE
Confidence            6788766

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.78  E-value=2.7e-19  Score=165.94  Aligned_cols=163  Identities=13%  Similarity=0.069  Sum_probs=126.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHH-hCCC-EEEEEeCC---hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLY-GIGA-KVIMACRD---VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~-~~g~-~v~~~~r~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .+|++||||+++|||+++|+.|+ ++|+ +|++++|+   .+..+++.++++.          .+.++.+++||++|.++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~----------~G~~v~~~~~Dvsd~~~  598 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTA----------YGAEVSLQACDVADRET  598 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHH----------TTCEEEEEECCTTCHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHh----------cCCcEEEEEeecCCHHH
Confidence            57999999999999999999999 7999 69999999   4556777777765          37799999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH-------------------------hhh--------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI-------------------------LSN--------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~-------------------------l~~--------------------------  116 (222)
                      ++++++.+.+.+ +||++|||||+..                         ++.                          
T Consensus       599 v~~~~~~~~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l~iV~~SS~ag~~g~~g~~~Y  677 (795)
T 3slk_A          599 LAKVLASIPDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDVALVLFSSVSGVLGSGGQGNY  677 (795)
T ss_dssp             HHHHHHTSCTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTSEEEEEEETHHHHTCSSCHHH
T ss_pred             HHHHHHHHHHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEccHHhcCCCCCCHHH
Confidence            999999998776 9999999999865                         000                          


Q ss_pred             --HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         117 --NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       117 --~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                        ...|+++|+.++.++||++|+|+||++.|.+...........   .....+ ....+++++...+.+++.++..
T Consensus       678 aAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~---~~~~~g-~~~l~~~e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          678 AAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQD---RLARSG-LLPISTEEGLSQFDAACGGAHT  749 (795)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHH---HHHHTT-BCCCCHHHHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHH---HHHhcC-CCCCCHHHHHHHHHHHHhCCCc
Confidence              457899999999999999999999999887643221000000   001111 1156888998888888766543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.77  E-value=2e-18  Score=152.14  Aligned_cols=159  Identities=15%  Similarity=0.090  Sum_probs=120.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh---hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV---EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++++|||||++|||++++++|+++|+ +|++++|+.   +..+++.++++..          +.++.++.||++|.+++.
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~----------g~~v~~~~~Dvtd~~~v~  308 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL----------GVRVTIAACDAADREALA  308 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT----------TCEEEEEECCTTCHHHHH
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc----------CCeEEEEEccCCCHHHHH
Confidence            48999999999999999999999999 899999974   3466677777653          679999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhH-H---h-------------hh------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYC-I---L-------------SN------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~-~---l-------------~~------------------------------------  116 (222)
                      ++++.+.+. +++|++|||||+. .   +             .|                                    
T Consensus       309 ~~~~~i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~  387 (496)
T 3mje_A          309 ALLAELPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPG  387 (496)
T ss_dssp             HHHHTCCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHH
T ss_pred             HHHHHHHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHH
Confidence            999998776 7999999999987 2   0             00                                    


Q ss_pred             ---HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 ---NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 ---~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                         ...+...|++++.+.||++++|+||++.+..+.....  ....   ....+ ....+|++++..+.+++..++
T Consensus       388 YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~--~~~~---l~~~g-~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          388 YAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPE--VHDR---LVRQG-VLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC--------CHH---HHHTT-EEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccChH--HHHH---HHhcC-CCCCCHHHHHHHHHHHHcCCC
Confidence               4556677888888889999999999886554332111  1111   11111 114699999999999975543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.75  E-value=2.9e-19  Score=143.84  Aligned_cols=158  Identities=18%  Similarity=0.056  Sum_probs=108.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |++|||||++|||+++++.|+++|++|++++|+.+.++                   .    .+.+|+++.++++++++.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------------~----~~~~D~~~~~~~~~~~~~   58 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-------------------A----DLSTPGGRETAVAAVLDR   58 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------------------C----CTTSHHHHHHHHHHHHHH
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-------------------c----cccCCcccHHHHHHHHHH
Confidence            58999999999999999999999999999999865321                   0    155677777777776654


Q ss_pred             HHhhccceeEEEechhhHH----------------------------------------------h--------------
Q psy7936          95 INQTEANVHILINNAVYCI----------------------------------------------L--------------  114 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~----------------------------------------------l--------------  114 (222)
                      +   .+++|++|||||...                                              .              
T Consensus        59 ~---~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~  135 (255)
T 2dkn_A           59 C---GGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGD  135 (255)
T ss_dssp             H---TTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTC
T ss_pred             c---CCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccc
Confidence            3   256777777776532                                              0              


Q ss_pred             ------------hh----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHH--HHHHHh
Q psy7936         115 ------------SN----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGR--VLMWWW  170 (222)
Q Consensus       115 ------------~~----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~~~  170 (222)
                                  ..          +..+++.++.+++++||++++|.||++.|++.................  +..+  
T Consensus       136 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--  213 (255)
T 2dkn_A          136 EARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGR--  213 (255)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSS--
T ss_pred             hhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcC--
Confidence                        00          334566666676678999999999999999865431111111100000  2223  


Q ss_pred             cCChHHHHHHHHHHhcCCCcccccccccccc
Q psy7936         171 MKTPEQGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       171 ~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      ..+|+|+|+.+++++.. ...+++|+++..+
T Consensus       214 ~~~~~dva~~~~~l~~~-~~~~~~G~~~~v~  243 (255)
T 2dkn_A          214 GSEPREVAEAIAFLLGP-QASFIHGSVLFVD  243 (255)
T ss_dssp             CBCHHHHHHHHHHHHSG-GGTTCCSCEEEES
T ss_pred             CCCHHHHHHHHHHHhCC-CcccceeeEEEec
Confidence            68999999999999754 4558899988433

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.74  E-value=9.9e-18  Score=147.72  Aligned_cols=158  Identities=16%  Similarity=0.117  Sum_probs=117.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChh---HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVE---KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++++|||||++|||++++++|+++|+ +|++++|+..   ..+++.++++..          +.++.++.||++|.+++
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~----------g~~v~~~~~Dv~d~~~v  294 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL----------GARTTVAACDVTDRESV  294 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT----------TCEEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc----------CCEEEEEEeCCCCHHHH
Confidence            578999999999999999999999999 6999999875   456666666553          66899999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      .++++.+ ..++++|++|||||+...                .|                                    
T Consensus       295 ~~~~~~i-~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~  373 (486)
T 2fr1_A          295 RELLGGI-GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGG  373 (486)
T ss_dssp             HHHHHTS-CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTT
T ss_pred             HHHHHHH-HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHH
Confidence            9999998 556899999999997530                00                                    


Q ss_pred             ---HHHHHHHHHhhcCCCCeEEEEEeCCcccCC-cCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 ---NILFYSILFYAIPGKNVNVYAVHPGIVKTE-LGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 ---~~~~~~~la~~~~~~gI~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                         ...+...++.++...|+++++|+||++.+. |........+..       .+ ....+|+++++.+.+++..+.
T Consensus       374 Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~~~~~~~~-------~g-~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          374 YAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVADRFRR-------HG-VIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             THHHHHHHHHHHHHHHHTTCCCEEEEECCBC------------CTT-------TT-EECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchhHHHHHHh-------cC-CCCCCHHHHHHHHHHHHhCCC
Confidence               355666777777778999999999998776 543221110000       00 115799999999999976553

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.74  E-value=3.9e-17  Score=138.10  Aligned_cols=161  Identities=12%  Similarity=0.042  Sum_probs=127.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHH-hCCCEEEEEeCChh------------HHHHHHHHHHHhhhhhcccCCCCCeEEEE
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLY-GIGAKVIMACRDVE------------KAETTASEIRKHFEVATSEDKKPGEVLIK   78 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~-~~g~~v~~~~r~~~------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   78 (222)
                      ..+|++|||||++|||++++..|+ +.|++++++.+..+            ....+.+.++..          +.+...+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~----------G~~a~~i  117 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE----------GLYSVTI  117 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH----------TCCEEEE
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc----------CCCceeE
Confidence            467999999999999999999999 67999998887542            244556666664          7899999


Q ss_pred             ecCCCChhhHHHHHHHHHhhccceeEEEechhhHHh--------------------------------------------
Q psy7936          79 KLDLASFKSIRDCAQDINQTEANVHILINNAVYCIL--------------------------------------------  114 (222)
Q Consensus        79 ~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l--------------------------------------------  114 (222)
                      .||+++.++++++++.+.+.+|+||+||||++...-                                            
T Consensus       118 ~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~ee  197 (401)
T 4ggo_A          118 DGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEE  197 (401)
T ss_dssp             ESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHH
T ss_pred             eCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHH
Confidence            999999999999999999999999999999986520                                            


Q ss_pred             -hh-------------------------------------------------------HHHHHHHHHhhcCCCCeEEEEE
Q psy7936         115 -SN-------------------------------------------------------NILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus       115 -~~-------------------------------------------------------~~~~~~~la~~~~~~gI~v~~v  138 (222)
                       .+                                                       +...++.|+.++++  +++|++
T Consensus       198 ie~T~~vMg~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~  275 (401)
T 4ggo_A          198 AAATVKVMGGEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVS  275 (401)
T ss_dssp             HHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEE
T ss_pred             HHHHHHHHhhhHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEE
Confidence             00                                                       88889999999974  899999


Q ss_pred             eCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         139 HPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       139 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                      +||.+.|+....++.-+....+ .....+.  .++-|.+.+.+..|..+
T Consensus       276 v~~a~vT~AssaIP~~ply~~~-l~kvmk~--~g~heg~ieq~~rl~~~  321 (401)
T 4ggo_A          276 VNKGLVTRASAVIPVIPLYLAS-LFKVMKE--KGNHEGCIEQITRLYAE  321 (401)
T ss_dssp             ECCCCCCTTGGGSSSHHHHHHH-HHHHHHH--HTCCCCHHHHHHHHHHH
T ss_pred             EcCccccchhhcCCCchHHHHH-HHHHHHh--cCCCCchHHHHHHHHHH
Confidence            9999999999988732211111 1112222  57889999999998644

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.71  E-value=8.9e-17  Score=142.33  Aligned_cols=154  Identities=17%  Similarity=0.098  Sum_probs=117.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChh---HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVE---KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++++|||||++|||.+++++|+++|+ +|++++|+..   ..+++.++++.          .+.++.++.||++|.+++
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~----------~g~~v~~~~~Dvtd~~~v  327 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG----------HGCEVVHAACDVAERDAL  327 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT----------TTCEEEEEECCSSCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh----------cCCEEEEEEeCCCCHHHH
Confidence            578999999999999999999999999 7999999874   45666666654          266899999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh----------------hh------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL----------------SN------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l----------------~~------------------------------------  116 (222)
                      .++++.     +++|++|||||+...                .|                                    
T Consensus       328 ~~~~~~-----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~  402 (511)
T 2z5l_A          328 AALVTA-----YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQG  402 (511)
T ss_dssp             HHHHHH-----SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBH
T ss_pred             HHHHhc-----CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCH
Confidence            998876     689999999997540                00                                    


Q ss_pred             ----HHHHHHHHHhhcCCCCeEEEEEeCCcc-cCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 ----NILFYSILFYAIPGKNVNVYAVHPGIV-KTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 ----~~~~~~~la~~~~~~gI~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                          ...+...++.++...|+++++|+||++ +|+|......     .  .....+ ....+|+++++.+..++..+.
T Consensus       403 ~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~~-----~--~~~~~g-~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          403 AYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGAGE-----E--SLSRRG-LRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHHH-----H--HHHHHT-BCCBCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCcccccccH-----H--HHHhcC-CCCCCHHHHHHHHHHHHhCCC
Confidence                344455566666678999999999988 8888754210     0  111111 125799999999999976554

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.70  E-value=3.5e-17  Score=130.92  Aligned_cols=156  Identities=15%  Similarity=0.027  Sum_probs=108.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..+..|+++||||+++||+++++.|++.| ++|++++|+.+.+.++                ....+.++++|++|.+++
T Consensus        19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~----------------~~~~~~~~~~Dl~d~~~~   82 (236)
T 3qvo_A           19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP----------------YPTNSQIIMGDVLNHAAL   82 (236)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS----------------CCTTEEEEECCTTCHHHH
T ss_pred             ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc----------------ccCCcEEEEecCCCHHHH
Confidence            44567899999999999999999999999 8999999998754321                134688999999999998


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHhhh------------------------------H-------------HHHHHHHH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCILSN------------------------------N-------------ILFYSILF  125 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l~~------------------------------~-------------~~~~~~la  125 (222)
                      .++++       .+|++|||+|......                              .             ........
T Consensus        83 ~~~~~-------~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (236)
T 3qvo_A           83 KQAMQ-------GQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAA  155 (236)
T ss_dssp             HHHHT-------TCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHH
T ss_pred             HHHhc-------CCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHH
Confidence            88765       4699999998644110                              0             11112223


Q ss_pred             hhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHH-HHHHhcCChHHHHHHHHHHhcCCCccccccccc
Q psy7936         126 YAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRV-LMWWWMKTPEQGAQTTLHCALDEGAAKETGLYY  198 (222)
Q Consensus       126 ~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i  198 (222)
                      ..+.+.||++++|.||++.++.........      ...+ .++  +.+++|+|+.+++++.++. .++ |+.+
T Consensus       156 ~~l~~~gi~~~~vrPg~i~~~~~~~~~~~~------~~~~~~~~--~i~~~DvA~~i~~ll~~~~-~~~-g~~~  219 (236)
T 3qvo_A          156 DAIEASGLEYTILRPAWLTDEDIIDYELTS------RNEPFKGT--IVSRKSVAALITDIIDKPE-KHI-GENI  219 (236)
T ss_dssp             HHHHTSCSEEEEEEECEEECCSCCCCEEEC------TTSCCSCS--EEEHHHHHHHHHHHHHSTT-TTT-TEEE
T ss_pred             HHHHHCCCCEEEEeCCcccCCCCcceEEec------cCCCCCCc--EECHHHHHHHHHHHHcCcc-ccc-CeeE
Confidence            345578999999999999887654321100      0001 112  5799999999999987653 355 5455

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.66  E-value=3.8e-16  Score=124.66  Aligned_cols=157  Identities=14%  Similarity=0.099  Sum_probs=106.4

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeE-EEEecCCCCh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEV-LIKKLDLASF   85 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~D~~~~   85 (222)
                      .+...+++++++||||+|+||++++++|+++|++|++++|+.+.++++.+                ..+ .++++|++  
T Consensus        14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----------------~~~~~~~~~Dl~--   75 (236)
T 3e8x_A           14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----------------RGASDIVVANLE--   75 (236)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----------------TTCSEEEECCTT--
T ss_pred             ccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----------------CCCceEEEcccH--
Confidence            34567899999999999999999999999999999999999987655431                145 78899998  


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHHh--------hh--------------------------------------HHH
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCIL--------SN--------------------------------------NIL  119 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~l--------~~--------------------------------------~~~  119 (222)
                             +.+.+.++.+|++|||||....        +|                                      .+.
T Consensus        76 -------~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~  148 (236)
T 3e8x_A           76 -------EDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYL  148 (236)
T ss_dssp             -------SCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHHH
T ss_pred             -------HHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhHH
Confidence                   3444555689999999986530        00                                      233


Q ss_pred             HHHHHHhh-cCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccc
Q psy7936         120 FYSILFYA-IPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLY  197 (222)
Q Consensus       120 ~~~~la~~-~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~  197 (222)
                      .+|..+.+ +.+.||+++.|.||++.+++....... ....      ..  ..+.+++|+|+.+++++..+.   .+|+.
T Consensus       149 ~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~~~~~~~~~~~~------~~--~~~i~~~Dva~~~~~~~~~~~---~~g~~  217 (236)
T 3e8x_A          149 VAKRLADDELKRSSLDYTIVRPGPLSNEESTGKVTVSPHFS------EI--TRSITRHDVAKVIAELVDQQH---TIGKT  217 (236)
T ss_dssp             HHHHHHHHHHHHSSSEEEEEEECSEECSCCCSEEEEESSCS------CC--CCCEEHHHHHHHHHHHTTCGG---GTTEE
T ss_pred             HHHHHHHHHHHHCCCCEEEEeCCcccCCCCCCeEEeccCCC------cc--cCcEeHHHHHHHHHHHhcCcc---ccCCe
Confidence            34444333 335799999999999998865432110 0000      00  115789999999999975542   56766


Q ss_pred             cc
Q psy7936         198 YS  199 (222)
Q Consensus       198 i~  199 (222)
                      +.
T Consensus       218 ~~  219 (236)
T 3e8x_A          218 FE  219 (236)
T ss_dssp             EE
T ss_pred             EE
Confidence            63

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.65  E-value=1.6e-15  Score=119.86  Aligned_cols=156  Identities=9%  Similarity=0.011  Sum_probs=107.5

Q ss_pred             CEEEEecCCCchHHHHHHHHH-hCCCEEEEEeCChh-HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLY-GIGAKVIMACRDVE-KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~-~~g~~v~~~~r~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      |+++||||+|+||+++++.|+ +.|++|++++|+.+ .++++.    .          ...++.++++|+++.+++.+++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~----------~~~~~~~~~~D~~d~~~~~~~~   71 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I----------DHERVTVIEGSFQNPGXLEQAV   71 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H----------TSTTEEEEECCTTCHHHHHHHH
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c----------CCCceEEEECCCCCHHHHHHHH
Confidence            689999999999999999999 89999999999987 665543    1          1457889999999999988876


Q ss_pred             HHHHhhccceeEEEechhhHH-----hhh------------------------HH----------HHH--HH-HHhhcCC
Q psy7936          93 QDINQTEANVHILINNAVYCI-----LSN------------------------NI----------LFY--SI-LFYAIPG  130 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~-----l~~------------------------~~----------~~~--~~-la~~~~~  130 (222)
                      +       .+|++|||||...     +..                        ..          .+.  |. +...+..
T Consensus        72 ~-------~~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~  144 (221)
T 3r6d_A           72 T-------NAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRE  144 (221)
T ss_dssp             T-------TCSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred             c-------CCCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHh
Confidence            5       5699999998621     000                        00          111  22 2223445


Q ss_pred             CCeEEEEEeCCcccCC-cCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHh--cCCCcccccccccc
Q psy7936         131 KNVNVYAVHPGIVKTE-LGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA--LDEGAAKETGLYYS  199 (222)
Q Consensus       131 ~gI~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~--~~~~~~~~~G~~i~  199 (222)
                      .||+++.|.||++.++ +..........      .+.. ..+.+++|+|+.+++++  .++ ..++++.+..
T Consensus       145 ~~i~~~~vrpg~v~~~~~~~~~~~~~~~------~~~~-~~~~~~~dvA~~~~~l~~~~~~-~~~~~~~~~i  208 (221)
T 3r6d_A          145 SNLNYTILRLTWLYNDPEXTDYELIPEG------AQFN-DAQVSREAVVKAIFDILHAADE-TPFHRTSIGV  208 (221)
T ss_dssp             SCSEEEEEEECEEECCTTCCCCEEECTT------SCCC-CCEEEHHHHHHHHHHHHTCSCC-GGGTTEEEEE
T ss_pred             CCCCEEEEechhhcCCCCCcceeeccCC------ccCC-CceeeHHHHHHHHHHHHHhcCh-hhhhcceeee
Confidence            7999999999999887 32222110000      0000 01578999999999997  554 4566665543

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.60  E-value=8.1e-15  Score=123.65  Aligned_cols=156  Identities=20%  Similarity=0.189  Sum_probs=109.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhC-CC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGI-GA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~-g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++|++|||||+|+||.+++++|++. |+ +|++++|++....++.+.+.            ..++.++.+|++|.+++.
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~------------~~~v~~~~~Dl~d~~~l~   86 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN------------DPRMRFFIGDVRDLERLN   86 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC------------CTTEEEEECCTTCHHHHH
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc------------CCCEEEEECCCCCHHHHH
Confidence            57899999999999999999999999 98 99999999887776655442            347889999999998887


Q ss_pred             HHHHHHHhhccceeEEEechhhHH------------hhh----------------------------------------H
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI------------LSN----------------------------------------N  117 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~------------l~~----------------------------------------~  117 (222)
                      ++++       .+|++||+||...            -+|                                        .
T Consensus        87 ~~~~-------~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~~~Y~~sK~~~  159 (344)
T 2gn4_A           87 YALE-------GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCS  159 (344)
T ss_dssp             HHTT-------TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCCSHHHHHHHHH
T ss_pred             HHHh-------cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccHHHHHHHHH
Confidence            7653       5899999998542            000                                        4


Q ss_pred             HHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHH-------HHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         118 ILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGR-------VLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       118 ~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                      ..+++.++.++++.|+++++|.||.+-++.....+  .+........       +-....+.+++|+|+.+++++..+
T Consensus       160 E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~--~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~  235 (344)
T 2gn4_A          160 DKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVP--FFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM  235 (344)
T ss_dssp             HHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHH--HHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHH--HHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc
Confidence            44555555556668999999999999775421100  0000000000       000011578999999999997543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.60  E-value=2.8e-15  Score=121.97  Aligned_cols=133  Identities=13%  Similarity=0.062  Sum_probs=99.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |++|++|||||++|||+++++.|++.|++|++++|+....                   ...++.++.+|+++.+++.++
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~-------------------~~~~~~~~~~Dl~d~~~~~~~   61 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP-------------------AGPNEECVQCDLADANAVNAM   61 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC-------------------CCTTEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc-------------------cCCCCEEEEcCCCCHHHHHHH
Confidence            3568999999999999999999999999999999987532                   134788999999999999987


Q ss_pred             HHHHHhhccceeEEEechhhHH--------hhh-----------------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI--------LSN-----------------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~--------l~~-----------------------------------------------  116 (222)
                      ++       ++|+||||||...        -+|                                               
T Consensus        62 ~~-------~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~  134 (267)
T 3rft_A           62 VA-------GCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDG  134 (267)
T ss_dssp             HT-------TCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCS
T ss_pred             Hc-------CCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCC
Confidence            76       5799999998743        000                                               


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                              ...+++.++.+   .|+++++|.||.+.+++.....             ...  +.+++++++.+..++..+
T Consensus       135 ~Y~~sK~~~e~~~~~~a~~---~g~~~~~vr~~~v~~~~~~~~~-------------~~~--~~~~~d~a~~~~~~~~~~  196 (267)
T 3rft_A          135 LYGVSKCFGENLARMYFDK---FGQETALVRIGSCTPEPNNYRM-------------LST--WFSHDDFVSLIEAVFRAP  196 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HCCCEEEEEECBCSSSCCSTTH-------------HHH--BCCHHHHHHHHHHHHHCS
T ss_pred             hHHHHHHHHHHHHHHHHHH---hCCeEEEEEeecccCCCCCCCc-------------eee--EEcHHHHHHHHHHHHhCC
Confidence                    33344444433   4788999999988776543211             111  678999999998886554

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.59  E-value=1.2e-16  Score=127.71  Aligned_cols=155  Identities=12%  Similarity=0.015  Sum_probs=102.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |++|+++||||+||||++++++|++.|+  +|++++|+.+.+.+..                ...+.++.+|+++.+++.
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----------------~~~~~~~~~D~~d~~~~~   79 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----------------YKNVNQEVVDFEKLDDYA   79 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----------------GGGCEEEECCGGGGGGGG
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----------------cCCceEEecCcCCHHHHH
Confidence            5789999999999999999999999999  9999999876432210                125678899999998877


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh---------hh---------------------------------HHHHHHHHHhh
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL---------SN---------------------------------NILFYSILFYA  127 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l---------~~---------------------------------~~~~~~~la~~  127 (222)
                      ++++       ++|++|||||....         +|                                 .+..+|.....
T Consensus        80 ~~~~-------~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~Y~~sK~~~e~  152 (242)
T 2bka_A           80 SAFQ-------GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEA  152 (242)
T ss_dssp             GGGS-------SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHH
T ss_pred             HHhc-------CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCcchHHHHHHHHHH
Confidence            6543       68999999986420         01                                 23333332222


Q ss_pred             c-CCCCe-EEEEEeCCcccCCcCCCCCCCCCcchhhhHHH--HHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         128 I-PGKNV-NVYAVHPGIVKTELGRYMDDTYFPGARTLGRV--LMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       128 ~-~~~gI-~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                      + ...++ ++++|.||++.|++.................+  .....+.+++|+|+.+++++.++.
T Consensus       153 ~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  218 (242)
T 2bka_A          153 KVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  218 (242)
T ss_dssp             HHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             HHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc
Confidence            2 23467 79999999999986532110000000000001  011226799999999999986653

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.53  E-value=1.6e-13  Score=107.78  Aligned_cols=162  Identities=12%  Similarity=0.013  Sum_probs=100.4

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+|+||+++++.|+++|++|++++|+.+.+.++.                 ..+.++.+|+++.++  +   . 
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------------~~~~~~~~D~~d~~~--~---~-   58 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-----------------KDINILQKDIFDLTL--S---D-   58 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-----------------SSSEEEECCGGGCCH--H---H-
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-----------------CCCeEEeccccChhh--h---h-
Confidence            5899999999999999999999999999999987654431                 256789999999887  1   1 


Q ss_pred             HhhccceeEEEechhhHH------------hhh--------------------------------------HHHHHHHHH
Q psy7936          96 NQTEANVHILINNAVYCI------------LSN--------------------------------------NILFYSILF  125 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~------------l~~--------------------------------------~~~~~~~la  125 (222)
                         +..+|++|||||...            +..                                      .+..++..+
T Consensus        59 ---~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~  135 (221)
T 3ew7_A           59 ---LSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQA  135 (221)
T ss_dssp             ---HTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHH
T ss_pred             ---hcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHH
Confidence               246899999998743            000                                      011122222


Q ss_pred             hh---c-C-CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccccccccccc
Q psy7936         126 YA---I-P-GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSD  200 (222)
Q Consensus       126 ~~---~-~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~  200 (222)
                      ..   + . ..|++++.|.||++.++.....................  .+.+++|+|+.++.++..+.   ..|+.+..
T Consensus       136 e~~~~~~~~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~--~~i~~~Dva~~~~~~l~~~~---~~g~~~~~  210 (221)
T 3ew7_A          136 KQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGN--SFISMEDYAIAVLDEIERPN---HLNEHFTV  210 (221)
T ss_dssp             HHHHHHHTTTTTSCEEEEECSSCCCCC-----------------------CCCHHHHHHHHHHHHHSCS---CTTSEEEC
T ss_pred             HHHHHHHhhccCccEEEEeCcceecCCCccCceEeccccceecCCCC--ceEeHHHHHHHHHHHHhCcc---ccCCEEEE
Confidence            11   2 2 67999999999999776211100000000000000111  26899999999999987653   35777765


Q ss_pred             ccccccCC
Q psy7936         201 YKVAKSRN  208 (222)
Q Consensus       201 ~~~~~~~~  208 (222)
                      .+...+++
T Consensus       211 ~~~~~~~~  218 (221)
T 3ew7_A          211 AGKLEHHH  218 (221)
T ss_dssp             CC------
T ss_pred             CCCCcccc
Confidence            55555443

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.48  E-value=1.1e-13  Score=115.61  Aligned_cols=86  Identities=23%  Similarity=0.238  Sum_probs=67.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |++|+++||||+|+||.+++++|+++|++|++++|+.+....  +.+....        ...++.++.+|+++.+++.++
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~   70 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELG--------IENDVKIIHMDLLEFSNIIRT   70 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTT--------CTTTEEECCCCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhcc--------ccCceeEEECCCCCHHHHHHH
Confidence            457899999999999999999999999999999998754321  1222211        124688899999999999988


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++.+     ++|++|||||..
T Consensus        71 ~~~~-----~~d~vih~A~~~   86 (345)
T 2z1m_A           71 IEKV-----QPDEVYNLAAQS   86 (345)
T ss_dssp             HHHH-----CCSEEEECCCCC
T ss_pred             HHhc-----CCCEEEECCCCc
Confidence            8765     789999999853

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.48  E-value=2.4e-13  Score=107.11  Aligned_cols=155  Identities=13%  Similarity=-0.028  Sum_probs=103.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+|+||++++++|++.|++|++++|+.+.+.++.                ...+.++.+|+++.++  +     
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----------------~~~~~~~~~D~~d~~~--~-----   58 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL----------------GATVATLVKEPLVLTE--A-----   58 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT----------------CTTSEEEECCGGGCCH--H-----
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc----------------CCCceEEecccccccH--h-----
Confidence            5999999999999999999999999999999988765431                2367789999999887  1     


Q ss_pred             HhhccceeEEEechhhHH--------------h---------------------------------------hhHHHHHH
Q psy7936          96 NQTEANVHILINNAVYCI--------------L---------------------------------------SNNILFYS  122 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~--------------l---------------------------------------~~~~~~~~  122 (222)
                        .+..+|++|||||...              +                                       .+.+..+|
T Consensus        59 --~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK  136 (224)
T 3h2s_A           59 --DLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGAL  136 (224)
T ss_dssp             --HHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHH
T ss_pred             --hcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCCCCCccchhhHHHH
Confidence              2246899999998841              0                                       01233344


Q ss_pred             HHHhh----cCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccccccccc
Q psy7936         123 ILFYA----IPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYY  198 (222)
Q Consensus       123 ~la~~----~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i  198 (222)
                      ..+..    ....|++++.|.||++.++........ ..........  ...+.+++|+|+.++.++..+.   ..|+.|
T Consensus       137 ~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~-~~~~~~~~~~--~~~~i~~~DvA~~~~~~l~~~~---~~g~~~  210 (224)
T 3h2s_A          137 YQYYEYQFLQMNANVNWIGISPSEAFPSGPATSYVA-GKDTLLVGED--GQSHITTGNMALAILDQLEHPT---AIRDRI  210 (224)
T ss_dssp             HHHHHHHHHTTCTTSCEEEEEECSBCCCCCCCCEEE-ESSBCCCCTT--SCCBCCHHHHHHHHHHHHHSCC---CTTSEE
T ss_pred             HHHHHHHHHHhcCCCcEEEEcCccccCCCcccCcee-cccccccCCC--CCceEeHHHHHHHHHHHhcCcc---ccCCEE
Confidence            33332    346799999999999987622111000 0000000000  0116899999999999986653   356666


Q ss_pred             ccc
Q psy7936         199 SDY  201 (222)
Q Consensus       199 ~~~  201 (222)
                      ...
T Consensus       211 ~~~  213 (224)
T 3h2s_A          211 VVR  213 (224)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            433

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.48  E-value=6e-14  Score=110.55  Aligned_cols=145  Identities=15%  Similarity=0.133  Sum_probs=104.5

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC-hhhHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS-FKSIRDCAQD   94 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~   94 (222)
                      +++||||+|+||+++++.|++.|++|++++|+.+..++                  ..++.++++|+++ .+++.++++ 
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------------------~~~~~~~~~D~~d~~~~~~~~~~-   62 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ------------------YNNVKAVHFDVDWTPEEMAKQLH-   62 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC------------------CTTEEEEECCTTSCHHHHHTTTT-
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh------------------cCCceEEEecccCCHHHHHHHHc-
Confidence            58999999999999999999999999999999864321                  1367899999999 877776543 


Q ss_pred             HHhhccceeEEEechhhHH-------------h---------------------------------hhHHHHHHHHHhhc
Q psy7936          95 INQTEANVHILINNAVYCI-------------L---------------------------------SNNILFYSILFYAI  128 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~-------------l---------------------------------~~~~~~~~~la~~~  128 (222)
                            .+|++|||||...             +                                 .+.+..+|..+.++
T Consensus        63 ------~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~  136 (219)
T 3dqp_A           63 ------GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLY  136 (219)
T ss_dssp             ------TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHH
T ss_pred             ------CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHH
Confidence                  5899999998764             0                                 11234455554443


Q ss_pred             --CCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccccccccc
Q psy7936         129 --PGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYY  198 (222)
Q Consensus       129 --~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i  198 (222)
                        ...|++++.+.||++.++........   .     ...  ..+.+++|+|+.+++++..+.   ..|+.+
T Consensus       137 ~~~~~~i~~~ilrp~~v~g~~~~~~~~~---~-----~~~--~~~i~~~Dva~~i~~~l~~~~---~~g~~~  195 (219)
T 3dqp_A          137 LTKETNLDYTIIQPGALTEEEATGLIDI---N-----DEV--SASNTIGDVADTIKELVMTDH---SIGKVI  195 (219)
T ss_dssp             HHHSCCCEEEEEEECSEECSCCCSEEEE---S-----SSC--CCCEEHHHHHHHHHHHHTCGG---GTTEEE
T ss_pred             HHhccCCcEEEEeCceEecCCCCCcccc---C-----CCc--CCcccHHHHHHHHHHHHhCcc---ccCcEE
Confidence              46799999999999977654322110   0     000  115789999999999986643   346555

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.47  E-value=1.4e-13  Score=106.80  Aligned_cols=153  Identities=16%  Similarity=0.098  Sum_probs=103.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++++++||||+|+||++++++|+++|++|++++|+.+.....                ...++.++.+|+++.+++.+++
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----------------~~~~~~~~~~D~~~~~~~~~~~   65 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE----------------GPRPAHVVVGDVLQAADVDKTV   65 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS----------------SCCCSEEEESCTTSHHHHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc----------------cCCceEEEEecCCCHHHHHHHH
Confidence            347899999999999999999999999999999998653211                1346788999999998888765


Q ss_pred             HHHHhhccceeEEEechhhHHh-----------hh---------------------------------HHHHHHHHHhh-
Q psy7936          93 QDINQTEANVHILINNAVYCIL-----------SN---------------------------------NILFYSILFYA-  127 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l-----------~~---------------------------------~~~~~~~la~~-  127 (222)
                      +       .+|++|||+|....           .+                                 .+...|....+ 
T Consensus        66 ~-------~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~  138 (206)
T 1hdo_A           66 A-------GQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKV  138 (206)
T ss_dssp             T-------TCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHH
T ss_pred             c-------CCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHH
Confidence            4       36999999985421           00                                 12223332222 


Q ss_pred             cCCCCeEEEEEeCCcc-cCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccccc
Q psy7936         128 IPGKNVNVYAVHPGIV-KTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       128 ~~~~gI~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~  199 (222)
                      +...|++++.+.||++ .+++....... . .    ..+..  .+.+++|+|+.+++++..+   ..+|+.+.
T Consensus       139 ~~~~~i~~~~lrp~~~~~~~~~~~~~~~-~-~----~~~~~--~~i~~~Dva~~~~~~~~~~---~~~g~~~~  200 (206)
T 1hdo_A          139 LRESGLKYVAVMPPHIGDQPLTGAYTVT-L-D----GRGPS--RVISKHDLGHFMLRCLTTD---EYDGHSTY  200 (206)
T ss_dssp             HHHTCSEEEEECCSEEECCCCCSCCEEE-S-S----SCSSC--SEEEHHHHHHHHHHTTSCS---TTTTCEEE
T ss_pred             HHhCCCCEEEEeCCcccCCCCCcceEec-c-c----CCCCC--CccCHHHHHHHHHHHhcCc---ccccccee
Confidence            2346899999999998 44432211100 0 0    00101  2679999999999997554   35677663

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.46  E-value=1.1e-13  Score=109.34  Aligned_cols=156  Identities=13%  Similarity=-0.016  Sum_probs=106.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++++||||+|+||.++++.|++.|++|++++|+.+....+                 ...+.++++|++|.+++.++++ 
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------~~~~~~~~~Dl~d~~~~~~~~~-   66 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-----------------NEHLKVKKADVSSLDEVCEVCK-   66 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-----------------CTTEEEECCCTTCHHHHHHHHT-
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-----------------cCceEEEEecCCCHHHHHHHhc-
Confidence            6899999999999999999999999999999997753211                 2478899999999999888765 


Q ss_pred             HHhhccceeEEEechhhHH---------------hh------------------------------------hHHHHHHH
Q psy7936          95 INQTEANVHILINNAVYCI---------------LS------------------------------------NNILFYSI  123 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~---------------l~------------------------------------~~~~~~~~  123 (222)
                            .+|++||+||...               +.                                    +.+..+|.
T Consensus        67 ------~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~  140 (227)
T 3dhn_A           67 ------GADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKA  140 (227)
T ss_dssp             ------TCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHH
T ss_pred             ------CCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHH
Confidence                  4799999998762               00                                    02344444


Q ss_pred             HHh----hcC-CCCeEEEEEeCCcccCCcCCCCCCC--CCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCccccccc
Q psy7936         124 LFY----AIP-GKNVNVYAVHPGIVKTELGRYMDDT--YFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGL  196 (222)
Q Consensus       124 la~----~~~-~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~  196 (222)
                      .+.    .+. +.|++++.+.||++-++........  ...... ....   ..+.+++|+|+.++.++.++.   ..|+
T Consensus       141 ~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~-~~~~---~~~i~~~Dva~ai~~~l~~~~---~~g~  213 (227)
T 3dhn_A          141 LGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIV-DIVG---NSHISVEDYAAAMIDELEHPK---HHQE  213 (227)
T ss_dssp             HHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCEEESSBCCC-CTTS---CCEEEHHHHHHHHHHHHHSCC---CCSE
T ss_pred             HHHHHHHHHhhccCccEEEEeCCcccCCCccccceeecCCCccc-CCCC---CcEEeHHHHHHHHHHHHhCcc---ccCc
Confidence            433    444 6799999999999865543211100  000000 0000   115789999999999987663   3566


Q ss_pred             ccccc
Q psy7936         197 YYSDY  201 (222)
Q Consensus       197 ~i~~~  201 (222)
                      .+...
T Consensus       214 ~~~~~  218 (227)
T 3dhn_A          214 RFTIG  218 (227)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            66433

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.46  E-value=1.8e-13  Score=109.42  Aligned_cols=157  Identities=15%  Similarity=0.052  Sum_probs=105.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGI--GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++++++||||+|+||.++++.|++.  |++|++++|+.+..+++                 ..++.++.+|+++.+++.
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-----------------~~~~~~~~~D~~d~~~~~   64 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----------------GGEADVFIGDITDADSIN   64 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----------------TCCTTEEECCTTSHHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-----------------CCCeeEEEecCCCHHHHH
Confidence            35789999999999999999999999  89999999998655332                 124567899999998888


Q ss_pred             HHHHHHHhhccceeEEEechhhHH-------------------------hhh----------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI-------------------------LSN----------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~-------------------------l~~----------------------------  116 (222)
                      ++++       .+|++|||||...                         -+|                            
T Consensus        65 ~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~  137 (253)
T 1xq6_A           65 PAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGT  137 (253)
T ss_dssp             HHHT-------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTT
T ss_pred             HHHc-------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCC
Confidence            8764       4799999998531                         011                            


Q ss_pred             ------------HHHHHHHHHhhc-CCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAI-PGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~-~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  .+...|.....+ ...|+++++|.||++.++.............. ....  ...+.+++|+|+.+++
T Consensus       138 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~Dva~~~~~  214 (253)
T 1xq6_A          138 NPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDE-LLQT--DTKTVPRADVAEVCIQ  214 (253)
T ss_dssp             CTTCGGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSSCEEEESTTG-GGGS--SCCEEEHHHHHHHHHH
T ss_pred             CCCCccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchhhhhccCCcC-CcCC--CCcEEcHHHHHHHHHH
Confidence                        011234433332 34789999999999988764321100000000 0000  1125789999999999


Q ss_pred             HhcCCCccccccccc
Q psy7936         184 CALDEGAAKETGLYY  198 (222)
Q Consensus       184 l~~~~~~~~~~G~~i  198 (222)
                      ++..+.   .+|+.+
T Consensus       215 ~~~~~~---~~g~~~  226 (253)
T 1xq6_A          215 ALLFEE---AKNKAF  226 (253)
T ss_dssp             HTTCGG---GTTEEE
T ss_pred             HHcCcc---ccCCEE
Confidence            975542   356655

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.45  E-value=4.7e-13  Score=111.92  Aligned_cols=86  Identities=20%  Similarity=0.185  Sum_probs=72.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .++++|||||+|+||.++++.|++.|++|++++|+.+...+..+.+....         +.++.++.+|+++.+++.+++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~   74 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT---------GKTPAFHETDVSDERALARIF   74 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH---------SCCCEEECCCTTCHHHHHHHH
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc---------CCCceEEEeecCCHHHHHHHH
Confidence            35799999999999999999999999999999998876666666665442         457889999999999999887


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +.     .++|++|||||..
T Consensus        75 ~~-----~~~d~vih~A~~~   89 (341)
T 3enk_A           75 DA-----HPITAAIHFAALK   89 (341)
T ss_dssp             HH-----SCCCEEEECCCCC
T ss_pred             hc-----cCCcEEEECcccc
Confidence            75     3789999999864

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.40  E-value=5.1e-12  Score=105.70  Aligned_cols=81  Identities=14%  Similarity=0.035  Sum_probs=64.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +++|||||+|+||.++++.|++.|++|++++|+. ....+..+.+..           ..++.++.+|+++.+++.++++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-----------~~~~~~~~~Dl~d~~~~~~~~~   70 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-----------LGNFEFVHGDIRNKNDVTRLIT   70 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-----------TCCCEEEECCTTCHHHHHHHHH
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-----------CCceEEEEcCCCCHHHHHHHHh
Confidence            5799999999999999999999999999999853 222222333332           2367889999999999998877


Q ss_pred             HHHhhccceeEEEechhh
Q psy7936          94 DINQTEANVHILINNAVY  111 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~  111 (222)
                      ..     ++|++|||||.
T Consensus        71 ~~-----~~d~vih~A~~   83 (347)
T 1orr_A           71 KY-----MPDSCFHLAGQ   83 (347)
T ss_dssp             HH-----CCSEEEECCCC
T ss_pred             cc-----CCCEEEECCcc
Confidence            52     68999999985

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.37  E-value=1e-12  Score=110.79  Aligned_cols=84  Identities=17%  Similarity=0.131  Sum_probs=69.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |++++++||||+|+||.+++++|++.|++|++++|+.+...++.+.+.           ...++.++.+|+++.+++.++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~~~~Dl~d~~~~~~~   75 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-----------VADGMQSEIGDIRDQNKLLES   75 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-----------TTTTSEEEECCTTCHHHHHHH
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-----------cCCceEEEEccccCHHHHHHH
Confidence            567899999999999999999999999999999998765444333321           134678899999999999988


Q ss_pred             HHHHHhhccceeEEEechhh
Q psy7936          92 AQDINQTEANVHILINNAVY  111 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~  111 (222)
                      ++.+     ++|++|||||.
T Consensus        76 ~~~~-----~~d~vih~A~~   90 (357)
T 1rkx_A           76 IREF-----QPEIVFHMAAQ   90 (357)
T ss_dssp             HHHH-----CCSEEEECCSC
T ss_pred             HHhc-----CCCEEEECCCC
Confidence            7765     68999999984

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.37  E-value=5.7e-12  Score=105.98  Aligned_cols=84  Identities=17%  Similarity=0.178  Sum_probs=65.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh----HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE----KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ++++++|||||+|+||.++++.|++.|++|++++|+..    .+.++.+.+...         ...++.++.+|+++.++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~   95 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK---------QWSNFKFIQGDIRNLDD   95 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH---------HHTTEEEEECCTTSHHH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccc---------cCCceEEEECCCCCHHH
Confidence            56789999999999999999999999999999999753    333333222111         02367889999999988


Q ss_pred             HHHHHHHHHhhccceeEEEechhh
Q psy7936          88 IRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      +.++++       .+|++||+||.
T Consensus        96 ~~~~~~-------~~d~vih~A~~  112 (352)
T 1sb8_A           96 CNNACA-------GVDYVLHQAAL  112 (352)
T ss_dssp             HHHHHT-------TCSEEEECCSC
T ss_pred             HHHHhc-------CCCEEEECCcc
Confidence            887655       68999999985

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.35  E-value=4.3e-12  Score=109.69  Aligned_cols=94  Identities=13%  Similarity=0.142  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh---HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE---KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ...+++++|||||+|+||.+++++|++.|++|++++|+.+   ..+.+.+.+......... .....++.++.+|+++.+
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETV-EMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHH-HHHHTTEEEEEECC---C
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhcccccc-ccccCceEEEeCCCCCcc
Confidence            3456789999999999999999999999999999999886   445555544432100000 001357889999999988


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhH
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++.        ...++|+||||||..
T Consensus       144 ~l~--------~~~~~d~Vih~A~~~  161 (427)
T 4f6c_A          144 DVV--------LPENMDTIIHAGART  161 (427)
T ss_dssp             CCC--------CSSCCSEEEECCCCC
T ss_pred             cCC--------CcCCCCEEEECCccc
Confidence            777        446899999999864

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.30  E-value=8.7e-12  Score=103.98  Aligned_cols=81  Identities=14%  Similarity=0.104  Sum_probs=61.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChh--HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVE--KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      +++++|||||+|+||.+++++|++.|  ++|++++|+..  ..+.+ +.+.           ...++.++.+|+++.+++
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-----------~~~~~~~~~~Dl~d~~~~   69 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-----------DDPRYTFVKGDVADYELV   69 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-----------TCTTEEEEECCTTCHHHH
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-----------cCCceEEEEcCCCCHHHH
Confidence            35579999999999999999999987  89999998642  11111 1110           134688899999999988


Q ss_pred             HHHHHHHHhhccceeEEEechhhH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+++       ..+|++|||||..
T Consensus        70 ~~~~-------~~~d~vih~A~~~   86 (336)
T 2hun_A           70 KELV-------RKVDGVVHLAAES   86 (336)
T ss_dssp             HHHH-------HTCSEEEECCCCC
T ss_pred             HHHh-------hCCCEEEECCCCc
Confidence            8776       3689999999864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.28  E-value=9e-12  Score=103.87  Aligned_cols=85  Identities=18%  Similarity=0.172  Sum_probs=70.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEE-ecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIK-KLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~   90 (222)
                      ++++++|||||+|+||.+++++|++.|++|++++|+.+..+.+.+.+...         .+.++.++ .+|+++.+++.+
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~   79 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK---------YPGRFETAVVEDMLKQGAYDE   79 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---------STTTEEEEECSCTTSTTTTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc---------CCCceEEEEecCCcChHHHHH
Confidence            57899999999999999999999999999999999988777666655443         13467777 899999888776


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +++       .+|++|||||..
T Consensus        80 ~~~-------~~d~vih~A~~~   94 (342)
T 1y1p_A           80 VIK-------GAAGVAHIASVV   94 (342)
T ss_dssp             TTT-------TCSEEEECCCCC
T ss_pred             HHc-------CCCEEEEeCCCC
Confidence            543       689999999854

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.28  E-value=7.4e-12  Score=102.96  Aligned_cols=85  Identities=22%  Similarity=0.379  Sum_probs=71.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|+++||||++|+|+++++.|++.|++|++++|+.++.+++.+.+....           .+.++.+|+++.+++.
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~-----------~~~~~~~D~~~~~~~~  183 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-----------KVNVTAAETADDASRA  183 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-----------TCCCEEEECCSHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC-----------CcEEEEecCCCHHHHH
Confidence            45789999999999999999999999999999999999998888887775421           2456789999998877


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++++.       +|++|||+|..
T Consensus       184 ~~~~~-------~DvlVn~ag~g  199 (287)
T 1lu9_A          184 EAVKG-------AHFVFTAGAIG  199 (287)
T ss_dssp             HHTTT-------CSEEEECCCTT
T ss_pred             HHHHh-------CCEEEECCCcc
Confidence            66543       69999999853

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.28  E-value=1.7e-12  Score=101.56  Aligned_cols=146  Identities=12%  Similarity=-0.027  Sum_probs=96.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+++++||||+|+||.+++++|+++|+  +|++++|+.+.         .           ..++.++.+|+++.+++.+
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~-----------~~~~~~~~~D~~~~~~~~~   63 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------E-----------HPRLDNPVGPLAELLPQLD   63 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------C-----------CTTEECCBSCHHHHGGGCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------c-----------CCCceEEeccccCHHHHHH
Confidence            357899999999999999999999998  99999998763         0           2256778889988776654


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------hh---------------------------------HHHHHHHHHhh
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------SN---------------------------------NILFYSILFYA  127 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------~~---------------------------------~~~~~~~la~~  127 (222)
                      ++         +|++|||||....          +|                                 .+...|.....
T Consensus        64 ~~---------~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~y~~sK~~~e~  134 (215)
T 2a35_A           64 GS---------IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQ  134 (215)
T ss_dssp             SC---------CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHH
T ss_pred             hh---------hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCccHHHHHHHHHHH
Confidence            32         7999999986431          00                                 34444444433


Q ss_pred             c-CCCCeE-EEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         128 I-PGKNVN-VYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       128 ~-~~~gI~-v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                      + ...|++ ++.+.||++.++..................+ ++....+++|+|+.++.++..+
T Consensus       135 ~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~Dva~~~~~~~~~~  196 (215)
T 2a35_A          135 ALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILP-GKYHGIEACDLARALWRLALEE  196 (215)
T ss_dssp             HHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC-----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHcCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccC-CCcCcEeHHHHHHHHHHHHhcC
Confidence            2 345898 9999999998775431100000000000001 1122578999999999997654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.26  E-value=6.5e-12  Score=102.76  Aligned_cols=149  Identities=13%  Similarity=0.115  Sum_probs=99.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      +++||||+|+||.++++.|.+. |++|++++|+.+...++                ....+.++++|++|.+++.++++ 
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----------------~~~~v~~~~~D~~d~~~l~~~~~-   64 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----------------WRGKVSVRQLDYFNQESMVEAFK-   64 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----------------GBTTBEEEECCTTCHHHHHHHTT-
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----------------hhCCCEEEEcCCCCHHHHHHHHh-
Confidence            4899999999999999999998 89999999998754322                12367889999999988887654 


Q ss_pred             HHhhccceeEEEechhhHHh--------hh----------------------------HHHHHHHHHhhcCCCCeEEEEE
Q psy7936          95 INQTEANVHILINNAVYCIL--------SN----------------------------NILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l--------~~----------------------------~~~~~~~la~~~~~~gI~v~~v  138 (222)
                            .+|++||+||....        .+                            ...+...+...+.+.|++++.+
T Consensus        65 ------~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~~~~~~~~~~~~e~~~~~~g~~~~il  138 (289)
T 3e48_A           65 ------GMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYFGYASRLLSTSGIDYTYV  138 (289)
T ss_dssp             ------TCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTCCSTTHHHHHHHHHHHHHHCCEEEEE
T ss_pred             ------CCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCCCCccchhHHHHHHHHHHcCCCEEEE
Confidence                  57999999986320        00                            1222233344445568999999


Q ss_pred             eCCcccCCcCCCCCCCCCcchhhhHHHHH--HHhcCChHHHHHHHHHHhcCCC
Q psy7936         139 HPGIVKTELGRYMDDTYFPGARTLGRVLM--WWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       139 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                      .||++.+++.......  ........+.+  +..+.+++|+|+.+++++..+.
T Consensus       139 rp~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~  189 (289)
T 3e48_A          139 RMAMYMDPLKPYLPEL--MNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPD  189 (289)
T ss_dssp             EECEESTTHHHHHHHH--HHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGG
T ss_pred             eccccccccHHHHHHH--HHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCC
Confidence            9999877643211000  00000000000  0115689999999999987653

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.26  E-value=3.7e-11  Score=122.49  Aligned_cols=90  Identities=24%  Similarity=0.248  Sum_probs=75.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCE-EEEEeCChhHH---HHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAK-VIMACRDVEKA---ETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+....   .+..+.++.          .+.++.++.||+++.+++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~----------~g~~v~~~~~Dvsd~~~v 1952 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRR----------QGVQVLVSTSNASSLDGA 1952 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHH----------TTCEEEEECCCSSSHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHh----------CCCEEEEEecCCCCHHHH
Confidence            6899999999999999999999999995 88899986443   344444443          366899999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +++++.+.+ ++++|++|||||+..
T Consensus      1953 ~~~~~~~~~-~g~id~lVnnAgv~~ 1976 (2512)
T 2vz8_A         1953 RSLITEATQ-LGPVGGVFNLAMVLR 1976 (2512)
T ss_dssp             HHHHHHHHH-HSCEEEEEECCCC--
T ss_pred             HHHHHHHHh-cCCCcEEEECCCcCC
Confidence            999999864 789999999999764

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.25  E-value=1.5e-11  Score=99.63  Aligned_cols=72  Identities=18%  Similarity=0.193  Sum_probs=59.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |+++||||+|+||.+++++|++.|++|++++|+....                   ....+.++.+|+++.+++.++++ 
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------------~~~~~~~~~~Dl~d~~~~~~~~~-   62 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA-------------------AEAHEEIVACDLADAQAVHDLVK-   62 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC-------------------CCTTEEECCCCTTCHHHHHHHHT-
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc-------------------cCCCccEEEccCCCHHHHHHHHc-
Confidence            6899999999999999999999999999999987521                   01246788999999988887764 


Q ss_pred             HHhhccceeEEEechhhH
Q psy7936          95 INQTEANVHILINNAVYC  112 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~  112 (222)
                            .+|++|||||..
T Consensus        63 ------~~d~vi~~a~~~   74 (267)
T 3ay3_A           63 ------DCDGIIHLGGVS   74 (267)
T ss_dssp             ------TCSEEEECCSCC
T ss_pred             ------CCCEEEECCcCC
Confidence                  479999999853

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.25  E-value=3.2e-12  Score=106.78  Aligned_cols=75  Identities=12%  Similarity=0.163  Sum_probs=58.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      .+++||||+|+||.+++++|++.|++|++++|+....+++    .            ..++.++.+|+++.+++.++++ 
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~------------~~~~~~~~~Dl~d~~~~~~~~~-   76 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A------------YLEPECRVAEMLDHAGLERALR-   76 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G------------GGCCEEEECCTTCHHHHHHHTT-
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c------------cCCeEEEEecCCCHHHHHHHHc-
Confidence            3799999999999999999999999999999987643221    1            1256788999999988877654 


Q ss_pred             HHhhccceeEEEechhhH
Q psy7936          95 INQTEANVHILINNAVYC  112 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~  112 (222)
                            .+|++||+||..
T Consensus        77 ------~~d~vih~a~~~   88 (342)
T 2x4g_A           77 ------GLDGVIFSAGYY   88 (342)
T ss_dssp             ------TCSEEEEC----
T ss_pred             ------CCCEEEECCccC
Confidence                  579999999864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.24  E-value=6.3e-12  Score=106.19  Aligned_cols=95  Identities=15%  Similarity=0.076  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHh--CCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYG--IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~--~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ++++++++|||||+|+||.++++.|++  .|++|++++|+...........+.. .  ......+.++.++.+|+++.++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~Dl~d~~~   82 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSL-G--HFKNLIGFKGEVIAADINNPLD   82 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCC-C--CGGGGTTCCSEEEECCTTCHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhh-h--hhhhccccCceEEECCCCCHHH
Confidence            457899999999999999999999999  9999999999765211100000000 0  0000124467899999999998


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.++      ...++|+||||||...
T Consensus        83 ~~~~------~~~~~D~vih~A~~~~  102 (362)
T 3sxp_A           83 LRRL------EKLHFDYLFHQAAVSD  102 (362)
T ss_dssp             HHHH------TTSCCSEEEECCCCCG
T ss_pred             HHHh------hccCCCEEEECCccCC
Confidence            8876      2357999999999655

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.21  E-value=9.3e-12  Score=103.92  Aligned_cols=85  Identities=8%  Similarity=0.073  Sum_probs=68.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      -..++++++|||||+|+||.+++++|++.|++|++++|+.....++.+              .-.++.++.+|+++.+++
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------------~l~~v~~~~~Dl~d~~~~   80 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP--------------PVAGLSVIEGSVTDAGLL   80 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC--------------SCTTEEEEECCTTCHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh--------------ccCCceEEEeeCCCHHHH
Confidence            356789999999999999999999999999999999997543211100              013678899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .++++.+     ++|++|||||..
T Consensus        81 ~~~~~~~-----~~D~vih~A~~~   99 (330)
T 2pzm_A           81 ERAFDSF-----KPTHVVHSAAAY   99 (330)
T ss_dssp             HHHHHHH-----CCSEEEECCCCC
T ss_pred             HHHHhhc-----CCCEEEECCccC
Confidence            9888765     789999999853

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.21  E-value=6.7e-11  Score=99.06  Aligned_cols=88  Identities=11%  Similarity=0.088  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +.++++++|||||+|+||.+++++|++.|  +.|++.+|+.....  .+.+....        ...++.++.+|+++.++
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~--------~~~~~~~~~~Dl~d~~~   89 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQ--------DHPNYYFVKGEIQNGEL   89 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTT--------TCTTEEEEECCTTCHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhc--------cCCCeEEEEcCCCCHHH
Confidence            45678899999999999999999999999  68888887642100  01111110        23578899999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhH
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++++..     ++|++||+||..
T Consensus        90 ~~~~~~~~-----~~d~Vih~A~~~  109 (346)
T 4egb_A           90 LEHVIKER-----DVQVIVNFAAES  109 (346)
T ss_dssp             HHHHHHHH-----TCCEEEECCCCC
T ss_pred             HHHHHhhc-----CCCEEEECCccc
Confidence            99988763     689999999854

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.20  E-value=4.6e-11  Score=100.25  Aligned_cols=89  Identities=16%  Similarity=0.142  Sum_probs=68.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .++++++|||||+|+||.++++.|++.|++|++++|+.....+..+.+.......     ...++.++.+|+++.+++.+
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~   96 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTE-----QWSRFCFIEGDIRDLTTCEQ   96 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHH-----HHTTEEEEECCTTCHHHHHH
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccc-----cCCceEEEEccCCCHHHHHH
Confidence            3567899999999999999999999999999999997654333334443321000     01478899999999988887


Q ss_pred             HHHHHHhhccceeEEEechhh
Q psy7936          91 CAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~  111 (222)
                      +++       .+|++||+||.
T Consensus        97 ~~~-------~~d~Vih~A~~  110 (351)
T 3ruf_A           97 VMK-------GVDHVLHQAAL  110 (351)
T ss_dssp             HTT-------TCSEEEECCCC
T ss_pred             Hhc-------CCCEEEECCcc
Confidence            654       68999999986

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.20  E-value=1.6e-10  Score=98.52  Aligned_cols=91  Identities=13%  Similarity=0.156  Sum_probs=67.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHH-hCCCEEEEEeCChhH---------HHHHHHHHHHhhhhhcccCCCCCe---EEEEec
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLY-GIGAKVIMACRDVEK---------AETTASEIRKHFEVATSEDKKPGE---VLIKKL   80 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~-~~g~~v~~~~r~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~   80 (222)
                      ++++|||||+|+||.+++++|+ +.|++|++++|+...         .+.+.+.++...     ...+..+   +.++.+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~   76 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD-----GPKPPWADRYAALEVG   76 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSC-----SSCCTTTTCCCEEEES
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhh-----ccccccCCceEEEEEC
Confidence            3589999999999999999999 999999999997643         344433333321     0000123   788999


Q ss_pred             CCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          81 DLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        81 D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      |+++.+++.++++.    ++++|+||||||...
T Consensus        77 Dl~d~~~~~~~~~~----~~~~d~vih~A~~~~  105 (397)
T 1gy8_A           77 DVRNEDFLNGVFTR----HGPIDAVVHMCAFLA  105 (397)
T ss_dssp             CTTCHHHHHHHHHH----SCCCCEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHh----cCCCCEEEECCCccC
Confidence            99999998887664    356999999998653

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.19  E-value=1.5e-11  Score=101.52  Aligned_cols=72  Identities=14%  Similarity=0.152  Sum_probs=54.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      +++|||||+|+||.++++.|+++|++|++++|+.+...+.                ....+.++.+|+++.+ +.++++ 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------------~~~~~~~~~~Dl~d~~-~~~~~~-   62 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF----------------VNPSAELHVRDLKDYS-WGAGIK-   62 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG----------------SCTTSEEECCCTTSTT-TTTTCC-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh----------------cCCCceEEECccccHH-HHhhcC-
Confidence            4699999999999999999999999999999976532211                1235678889999876 443221 


Q ss_pred             HHhhccceeEEEechhh
Q psy7936          95 INQTEANVHILINNAVY  111 (222)
Q Consensus        95 i~~~~~~id~li~~ag~  111 (222)
                            . |++||+||.
T Consensus        63 ------~-d~vih~A~~   72 (312)
T 3ko8_A           63 ------G-DVVFHFAAN   72 (312)
T ss_dssp             ------C-SEEEECCSS
T ss_pred             ------C-CEEEECCCC
Confidence                  2 899999874

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.17  E-value=4.1e-11  Score=98.52  Aligned_cols=154  Identities=14%  Similarity=-0.043  Sum_probs=98.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +|+++||||+|+||.++++.|++.| ++|++++|+.+....  +.+..            ..+.++++|++|.+++.+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~------------~~~~~~~~D~~d~~~l~~~~   70 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL------------QGAEVVQGDQDDQVIMELAL   70 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH------------TTCEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH------------CCCEEEEecCCCHHHHHHHH
Confidence            4789999999999999999999999 899999998765421  22221            14567899999999888765


Q ss_pred             HHHHhhccceeEEEechhhHHh----h------h-------------------------------HHHHHHHHHhh-cCC
Q psy7936          93 QDINQTEANVHILINNAVYCIL----S------N-------------------------------NILFYSILFYA-IPG  130 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l----~------~-------------------------------~~~~~~~la~~-~~~  130 (222)
                      +       .+|++|||++....    .      +                               .+...|....+ +..
T Consensus        71 ~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~  143 (299)
T 2wm3_A           71 N-------GAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRD  143 (299)
T ss_dssp             T-------TCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHH
T ss_pred             h-------cCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHH
Confidence            4       47999999986421    0      0                               11112222222 123


Q ss_pred             CCeEEEEEeCCcccCCcCCCCCCCCCcch--hhhHHHH--HHHhcCChHHHHHHHHHHhcCC
Q psy7936         131 KNVNVYAVHPGIVKTELGRYMDDTYFPGA--RTLGRVL--MWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       131 ~gI~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                      .|++++.+.||++.+++...+........  .....+.  .+..+.+++|+|+.+..++..+
T Consensus       144 ~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (299)
T 2wm3_A          144 IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMP  205 (299)
T ss_dssp             HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSH
T ss_pred             CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcCh
Confidence            48999999999987765432211000000  0000000  0112578999999999997653

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.16  E-value=7.5e-11  Score=98.74  Aligned_cols=85  Identities=14%  Similarity=0.128  Sum_probs=65.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH------HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK------AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +|+++||||+|+||.+++++|++.|++|++++|+...      ..+..+.+...         .+.++.++.+|+++.++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~D~~~~~~   72 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL---------TGRSVEFEEMDILDQGA   72 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH---------HTCCCEEEECCTTCHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc---------cCCceEEEECCCCCHHH
Confidence            4789999999999999999999999999999885432      12222333321         13467889999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhH
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++++..     ++|++||+||..
T Consensus        73 ~~~~~~~~-----~~d~vih~A~~~   92 (348)
T 1ek6_A           73 LQRLFKKY-----SFMAVIHFAGLK   92 (348)
T ss_dssp             HHHHHHHC-----CEEEEEECCSCC
T ss_pred             HHHHHHhc-----CCCEEEECCCCc
Confidence            98887652     789999999853

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.14  E-value=1e-10  Score=98.74  Aligned_cols=88  Identities=16%  Similarity=0.125  Sum_probs=61.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH-HHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE-TTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +|+++||||+|+||.+++++|++.|++|++++|+..... +..+.+....      ...+.++.++.+|+++.+++.+++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~   74 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDP------HTCNPKFHLHYGDLSDTSNLTRIL   74 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------------CCEEECCCCSSCHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhcc------ccCCCceEEEECCCCCHHHHHHHH
Confidence            368999999999999999999999999999999865421 1111111100      001346889999999999999888


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +.+     ++|++|||||..
T Consensus        75 ~~~-----~~d~vih~A~~~   89 (372)
T 1db3_A           75 REV-----QPDEVYNLGAMS   89 (372)
T ss_dssp             HHH-----CCSEEEECCCCC
T ss_pred             Hhc-----CCCEEEECCccc
Confidence            765     689999999864

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.14  E-value=5.4e-11  Score=99.68  Aligned_cols=78  Identities=12%  Similarity=0.062  Sum_probs=60.2

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ..+.++++|++|||||+|+||.++++.|++.|++|++++|+...                      .++.++.+|+++.+
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----------------------~~~~~~~~Dl~d~~   69 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG----------------------TGGEEVVGSLEDGQ   69 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS----------------------SCCSEEESCTTCHH
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC----------------------CCccEEecCcCCHH
Confidence            34566788999999999999999999999999999999998753                      24568899999998


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++.++++       .+|++||+|+...
T Consensus        70 ~~~~~~~-------~~d~vih~A~~~~   89 (347)
T 4id9_A           70 ALSDAIM-------GVSAVLHLGAFMS   89 (347)
T ss_dssp             HHHHHHT-------TCSEEEECCCCCC
T ss_pred             HHHHHHh-------CCCEEEECCcccC
Confidence            8887655       6799999998654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.14  E-value=8.8e-11  Score=99.52  Aligned_cols=85  Identities=18%  Similarity=0.153  Sum_probs=64.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-----HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-----AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |++|||||+|+||.++++.|++.|++|++++|+...     ++.+.+.+...         ...++.++.+|+++.+++.
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~Dl~d~~~~~   95 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH---------IEGNMKLHYGDLTDSTCLV   95 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC------------------CEEEEECCTTCHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc---------cCCCceEEEccCCCHHHHH
Confidence            689999999999999999999999999999997642     22211111100         1246788999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++++.+     ++|++|||||...
T Consensus        96 ~~~~~~-----~~d~vih~A~~~~  114 (375)
T 1t2a_A           96 KIINEV-----KPTEIYNLGAQSH  114 (375)
T ss_dssp             HHHHHH-----CCSEEEECCSCCC
T ss_pred             HHHHhc-----CCCEEEECCCccc
Confidence            888765     6899999998643

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.13  E-value=7.1e-11  Score=98.65  Aligned_cols=85  Identities=18%  Similarity=0.154  Sum_probs=64.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ...+++++++||||+|+||.+++++|++.|++|++++|+.....+   .+.           .-.++.++.+|+++.+++
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~-----------~~~~~~~~~~Dl~d~~~~   81 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLK-----------DHPNLTFVEGSIADHALV   81 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSC-----------CCTTEEEEECCTTCHHHH
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHh-----------hcCCceEEEEeCCCHHHH
Confidence            345678899999999999999999999999999999997542111   000           013678899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .++++.     .++|++|||||..
T Consensus        82 ~~~~~~-----~~~D~vih~A~~~  100 (333)
T 2q1w_A           82 NQLIGD-----LQPDAVVHTAASY  100 (333)
T ss_dssp             HHHHHH-----HCCSEEEECCCCC
T ss_pred             HHHHhc-----cCCcEEEECceec
Confidence            888765     2689999999864

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.12  E-value=8.4e-11  Score=98.29  Aligned_cols=86  Identities=17%  Similarity=0.153  Sum_probs=69.6

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHhCC-------CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEE
Q psy7936           6 AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIG-------AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIK   78 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g-------~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   78 (222)
                      .+.+..|++++++||||+|+||.++++.|++.|       ++|++++|+.....+       .         ...++.++
T Consensus         6 ~~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~---------~~~~~~~~   69 (342)
T 2hrz_A            6 GRENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------G---------FSGAVDAR   69 (342)
T ss_dssp             SCCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------T---------CCSEEEEE
T ss_pred             CCCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------c---------cCCceeEE
Confidence            344566789999999999999999999999999       899999997643211       0         24578899


Q ss_pred             ecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          79 KLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        79 ~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .+|+++.+++.++++      ..+|++|||||...
T Consensus        70 ~~Dl~d~~~~~~~~~------~~~d~vih~A~~~~   98 (342)
T 2hrz_A           70 AADLSAPGEAEKLVE------ARPDVIFHLAAIVS   98 (342)
T ss_dssp             ECCTTSTTHHHHHHH------TCCSEEEECCCCCH
T ss_pred             EcCCCCHHHHHHHHh------cCCCEEEECCccCc
Confidence            999999999888765      37899999998643

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.12  E-value=2.4e-10  Score=95.96  Aligned_cols=159  Identities=9%  Similarity=-0.012  Sum_probs=100.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh----hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV----EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      |++++++||||||+||.++++.|++.|++|++++|+.    +..+.+ +.+.            ...+.++.+|++|.++
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~------------~~~v~~~~~Dl~d~~~   74 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIF-KALE------------DKGAIIVYGLINEQEA   74 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHH------------HTTCEEEECCTTCHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHH------------hCCcEEEEeecCCHHH
Confidence            4567899999999999999999999999999999976    333222 2222            2367789999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHhhh------------------------------------HHHHHHHHHhh-cCC
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCILSN------------------------------------NILFYSILFYA-IPG  130 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l~~------------------------------------~~~~~~~la~~-~~~  130 (222)
                      +.++++..     .+|++||++|...+..                                    .+...|..+.+ +..
T Consensus        75 l~~~~~~~-----~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~  149 (346)
T 3i6i_A           75 MEKILKEH-----EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEE  149 (346)
T ss_dssp             HHHHHHHT-----TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhC-----CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeecccCCCCCccCcCCCcchHHHHHHHHHHHHHH
Confidence            98887753     6899999999754221                                    12222322222 223


Q ss_pred             CCeEEEEEeCCcccCCcCCCCCCCC----Ccchhh-hHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         131 KNVNVYAVHPGIVKTELGRYMDDTY----FPGART-LGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       131 ~gI~v~~v~PG~v~T~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                      .|+.++.+.||++-...........    ...... ....-.+..+..++|+|+.++.++..+
T Consensus       150 ~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~  212 (346)
T 3i6i_A          150 SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDV  212 (346)
T ss_dssp             TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCG
T ss_pred             cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCc
Confidence            6899999999987554432211100    000000 000000111578999999999997665

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.10  E-value=1.3e-10  Score=96.80  Aligned_cols=87  Identities=16%  Similarity=0.107  Sum_probs=65.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .-+++++|||||+|+||.++++.|++.|++|++++|+......  ..+....        ...++.++.+|+++.+++.+
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~   80 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELG--------IEGDIQYEDGDMADACSVQR   80 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTT--------CGGGEEEEECCTTCHHHHHH
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhcc--------ccCceEEEECCCCCHHHHHH
Confidence            3467899999999999999999999999999999998653210  0111110        13367889999999999998


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +++.+     ++|++||+||..
T Consensus        81 ~~~~~-----~~d~Vih~A~~~   97 (335)
T 1rpn_A           81 AVIKA-----QPQEVYNLAAQS   97 (335)
T ss_dssp             HHHHH-----CCSEEEECCSCC
T ss_pred             HHHHc-----CCCEEEECcccc
Confidence            87765     689999999864

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.09  E-value=6.2e-10  Score=95.00  Aligned_cols=88  Identities=14%  Similarity=0.109  Sum_probs=65.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHH----------------HHHHHHHhhhhhcccCCCCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAET----------------TASEIRKHFEVATSEDKKPG   73 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~----------------~~~~i~~~~~~~~~~~~~~~   73 (222)
                      ...++.++|||||+|.||.+++++|+++|++|++++|+......                ....+...         ...
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---------~~~   77 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL---------TGK   77 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH---------HCC
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhc---------cCC
Confidence            34578899999999999999999999999999999987543211                11111111         134


Q ss_pred             eEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhh
Q psy7936          74 EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        74 ~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      ++.++.+|+++.+++.++++..     ++|+||||||.
T Consensus        78 ~v~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~  110 (404)
T 1i24_A           78 SIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQ  110 (404)
T ss_dssp             CCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSC
T ss_pred             ceEEEECCCCCHHHHHHHHhcc-----CCCEEEECCCC
Confidence            6788999999999998887764     68999999975

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.08  E-value=1.5e-10  Score=105.98  Aligned_cols=89  Identities=18%  Similarity=0.184  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++|++|||||+|+||.+++++|++.|++|++++|+.....+..+.+...         ...++.++.+|+++.+++.
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~~~~v~~v~~Dl~d~~~l~   77 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL---------TKHHIPFYEVDLCDRKGLE   77 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH---------HTSCCCEEECCTTCHHHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhc---------cCCceEEEEcCCCCHHHHH
Confidence            4467899999999999999999999999999999998764322222333221         1346778899999999998


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++++..     ++|+|||+||..
T Consensus        78 ~~~~~~-----~~D~Vih~A~~~   95 (699)
T 1z45_A           78 KVFKEY-----KIDSVIHFAGLK   95 (699)
T ss_dssp             HHHHHS-----CCCEEEECCSCC
T ss_pred             HHHHhC-----CCCEEEECCccc
Confidence            877653     689999999853

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.08  E-value=2.1e-10  Score=95.66  Aligned_cols=82  Identities=18%  Similarity=0.159  Sum_probs=61.9

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      ++|||||+|+||.+++++|++.|++|++++|......+..+.+...         .+.++.++.+|+++.+++.++++..
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~~~~~~~~~~~~~   72 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL---------GGKHPTFVEGDIRNEALMTEILHDH   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH---------HTSCCEEEECCTTCHHHHHHHHHHT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhh---------cCCcceEEEccCCCHHHHHHHhhcc
Confidence            6899999999999999999999999999986432111112222221         1346778899999999988877652


Q ss_pred             HhhccceeEEEechhh
Q psy7936          96 NQTEANVHILINNAVY  111 (222)
Q Consensus        96 ~~~~~~id~li~~ag~  111 (222)
                           ++|++|||||.
T Consensus        73 -----~~D~vih~A~~   83 (338)
T 1udb_A           73 -----AIDTVIHFAGL   83 (338)
T ss_dssp             -----TCSEEEECCSC
T ss_pred             -----CCCEEEECCcc
Confidence                 68999999985

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.07  E-value=1.6e-10  Score=98.07  Aligned_cols=83  Identities=20%  Similarity=0.150  Sum_probs=64.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-----HHHHHHHHHHhhhhhcccCCCCC-eEEEEecCCCChhhH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-----AETTASEIRKHFEVATSEDKKPG-EVLIKKLDLASFKSI   88 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v   88 (222)
                      |++|||||+|+||.++++.|++.|++|++++|+...     ++.+...+..          .+. ++.++.+|+++.+++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~Dl~d~~~~   98 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN----------VNKALMKLHYADLTDASSL   98 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC------------------CCEEEEECCTTCHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc----------ccccceEEEECCCCCHHHH
Confidence            689999999999999999999999999999998653     2222111111          122 678899999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .++++.+     ++|+|||+||..
T Consensus        99 ~~~~~~~-----~~d~Vih~A~~~  117 (381)
T 1n7h_A           99 RRWIDVI-----KPDEVYNLAAQS  117 (381)
T ss_dssp             HHHHHHH-----CCSEEEECCSCC
T ss_pred             HHHHHhc-----CCCEEEECCccc
Confidence            9888765     689999999864

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.07  E-value=1.8e-10  Score=97.92  Aligned_cols=84  Identities=14%  Similarity=0.184  Sum_probs=65.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      ...+++++++||||+|+||.++++.|++.| ++|++++|+.....+   .+.           ...++.++.+|+++.++
T Consensus        27 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-----------~~~~v~~~~~Dl~d~~~   92 (377)
T 2q1s_A           27 ASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-----------DHPAVRFSETSITDDAL   92 (377)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-----------CCTTEEEECSCTTCHHH
T ss_pred             hHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-----------CCCceEEEECCCCCHHH
Confidence            345678899999999999999999999999 999999998653211   000           13468889999999887


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.++++       .+|++||+||...
T Consensus        93 l~~~~~-------~~d~Vih~A~~~~  111 (377)
T 2q1s_A           93 LASLQD-------EYDYVFHLATYHG  111 (377)
T ss_dssp             HHHCCS-------CCSEEEECCCCSC
T ss_pred             HHHHhh-------CCCEEEECCCccC
Confidence            765433       6899999998653

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.06  E-value=1.3e-09  Score=95.71  Aligned_cols=122  Identities=15%  Similarity=0.164  Sum_probs=78.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhC---CCEEEEEeCChhHHHHHHHHHHHhhhhh------cccCCCCCeEEEEec
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGI---GAKVIMACRDVEKAETTASEIRKHFEVA------TSEDKKPGEVLIKKL   80 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~---g~~v~~~~r~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~   80 (222)
                      ...++++++||||+|+||.+++++|++.   |++|++++|+...... .+.+.......      ........++.++.+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            3457899999999999999999999999   8999999998764422 22222221000      000001357899999


Q ss_pred             CCCCh------hhHHHHHHHHHhhccceeEEEechhhHHh-------hhHHHHHHHHHhhcCCCCe-EEEEEe
Q psy7936          81 DLASF------KSIRDCAQDINQTEANVHILINNAVYCIL-------SNNILFYSILFYAIPGKNV-NVYAVH  139 (222)
Q Consensus        81 D~~~~------~~v~~~~~~i~~~~~~id~li~~ag~~~l-------~~~~~~~~~la~~~~~~gI-~v~~v~  139 (222)
                      |+++.      +.+.++++       .+|++|||||....       ..+...+..+.....+.++ ++..++
T Consensus       148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iS  213 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVS  213 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEE
T ss_pred             ECCCcccCCCHHHHHHHHc-------CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence            99954      45555443       57999999997542       1244445555555555554 444444

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.06  E-value=6e-10  Score=92.54  Aligned_cols=77  Identities=18%  Similarity=0.176  Sum_probs=62.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++++||||+|+||.+++++|++.|++|++++|+.....       ..         -..++.++.+|+++.+++.++++.
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~---------~~~~~~~~~~D~~~~~~~~~~~~~   65 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-------DA---------ITEGAKFYNGDLRDKAFLRDVFTQ   65 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-------GG---------SCTTSEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch-------hh---------cCCCcEEEECCCCCHHHHHHHHhh
Confidence            57999999999999999999999999999998754321       01         012567889999999998887764


Q ss_pred             HHhhccceeEEEechhhH
Q psy7936          95 INQTEANVHILINNAVYC  112 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~  112 (222)
                           ..+|++||+||..
T Consensus        66 -----~~~d~vih~a~~~   78 (330)
T 2c20_A           66 -----ENIEAVMHFAADS   78 (330)
T ss_dssp             -----SCEEEEEECCCCC
T ss_pred             -----cCCCEEEECCccc
Confidence                 3789999999853

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.06  E-value=3.4e-10  Score=89.52  Aligned_cols=79  Identities=22%  Similarity=0.250  Sum_probs=60.1

Q ss_pred             CCCCCEEEEecC----------------CCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCe
Q psy7936          11 RLDGKTVIITGC----------------NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE   74 (222)
Q Consensus        11 ~~~~k~~lVtGa----------------s~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~   74 (222)
                      +|.||++|||||                +||||+++|+.|++.|++|++++++.. ++        .         +. .
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~---------~~-g   65 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------T---------PP-F   65 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------C---------CT-T
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------c---------CC-C
Confidence            578999999999                689999999999999999999987652 10        0         11 1


Q ss_pred             EEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          75 VLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        75 ~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +  -.+|+++.   .++.+.+.+.++++|++|||||+..
T Consensus        66 ~--~~~dv~~~---~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           66 V--KRVDVMTA---LEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             E--EEEECCSH---HHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             C--eEEccCcH---HHHHHHHHHhcCCCCEEEECCcccC
Confidence            1  24577664   4455666777889999999999754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.04  E-value=2.3e-10  Score=96.73  Aligned_cols=81  Identities=12%  Similarity=0.144  Sum_probs=64.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCC-Chhh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLA-SFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~   87 (222)
                      ..|.+++++||||+|+||.++++.|++. |++|++++|+.+....+.               ...++.++.+|++ +.++
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~---------------~~~~v~~~~~Dl~~d~~~   84 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV---------------KHERMHFFEGDITINKEW   84 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG---------------GSTTEEEEECCTTTCHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc---------------cCCCeEEEeCccCCCHHH
Confidence            3466789999999999999999999998 899999999876543321               1247889999999 8888


Q ss_pred             HHHHHHHHHhhccceeEEEechhhH
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++++       .+|++||+|+..
T Consensus        85 ~~~~~~-------~~d~Vih~A~~~  102 (372)
T 3slg_A           85 VEYHVK-------KCDVILPLVAIA  102 (372)
T ss_dssp             HHHHHH-------HCSEEEECBCCC
T ss_pred             HHHHhc-------cCCEEEEcCccc
Confidence            888766       479999999853

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.03  E-value=1.8e-10  Score=96.15  Aligned_cols=84  Identities=20%  Similarity=0.171  Sum_probs=62.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++|++|||||+|+||.+++++|+++|++|+++.|+.+...+... +.....       ...++.++++|+++.+++.+++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~   75 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPK-------AETHLTLWKADLADEGSFDEAI   75 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTT-------HHHHEEEEECCTTSTTTTHHHH
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhccc-------CCCeEEEEEcCCCCHHHHHHHH
Confidence            57899999999999999999999999999999998764433221 111100       0125778999999999888776


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      +       .+|++||+|+.
T Consensus        76 ~-------~~d~Vih~A~~   87 (337)
T 2c29_D           76 K-------GCTGVFHVATP   87 (337)
T ss_dssp             T-------TCSEEEECCCC
T ss_pred             c-------CCCEEEEeccc
Confidence            4       46999999974

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.02  E-value=7e-10  Score=91.19  Aligned_cols=155  Identities=15%  Similarity=0.083  Sum_probs=98.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-------hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-------EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      +++++||||||+||.++++.|++.|++|++++|+.       ++.+.+ +.+..            ..+.++++|++|.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~------------~~v~~v~~D~~d~~   68 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS------------LGVILLEGDINDHE   68 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH------------TTCEEEECCTTCHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh------------CCCEEEEeCCCCHH
Confidence            46799999999999999999999999999999986       444332 22322            24678899999998


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHhhhHHH------------------------------------HHHHHHhh-cC
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCILSNNIL------------------------------------FYSILFYA-IP  129 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l~~~~~------------------------------------~~~~la~~-~~  129 (222)
                      ++.++++       .+|++||++|...+.....                                    ..|....+ +.
T Consensus        69 ~l~~~~~-------~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~  141 (307)
T 2gas_A           69 TLVKAIK-------QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVFEEKASIRRVIE  141 (307)
T ss_dssp             HHHHHHT-------TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHh-------CCCEEEECCcccccccHHHHHHHHHhcCCceEEeecccccCcccccCCCcchhHHHHHHHHHHHHH
Confidence            8877665       4799999998543111000                                    11211111 12


Q ss_pred             CCCeEEEEEeCCcccCCcCCCCCCC----CCcchhh-hHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         130 GKNVNVYAVHPGIVKTELGRYMDDT----YFPGART-LGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       130 ~~gI~v~~v~PG~v~T~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                      +.|++++.+.||++.+++.......    ....... ....-.+..+.+++|+|+.++.++..+
T Consensus       142 ~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (307)
T 2gas_A          142 AEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDP  205 (307)
T ss_dssp             HHTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCG
T ss_pred             HcCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCc
Confidence            3479999999998877654322110    0000000 000000111568999999999997654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.02  E-value=9.2e-10  Score=91.04  Aligned_cols=76  Identities=20%  Similarity=0.222  Sum_probs=62.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+.+++|||||+|+||.++++.|++.|++|++++|+... +.    +               ++.++.+|+++.+++.++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l---------------~~~~~~~Dl~d~~~~~~~   69 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P---------------NVEMISLDIMDSQRVKKV   69 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T---------------TEEEEECCTTCHHHHHHH
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c---------------eeeEEECCCCCHHHHHHH
Confidence            356799999999999999999999999999999998753 11    0               456889999999999988


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++.     +++|++|||||..
T Consensus        70 ~~~-----~~~d~vih~A~~~   85 (321)
T 2pk3_A           70 ISD-----IKPDYIFHLAAKS   85 (321)
T ss_dssp             HHH-----HCCSEEEECCSCC
T ss_pred             HHh-----cCCCEEEEcCccc
Confidence            765     3689999999863

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.00  E-value=4.8e-10  Score=92.61  Aligned_cols=71  Identities=11%  Similarity=0.223  Sum_probs=45.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|+++||||+|+||.+++++|++.|++|++++|+...                    +  +  ++.+|+++.+++.++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------------------~--~--~~~~Dl~d~~~~~~~~~   57 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------------------P--K--FEQVNLLDSNAVHHIIH   57 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------------------CHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------------------C--C--eEEecCCCHHHHHHHHH
Confidence            4789999999999999999999999999999987542                    0  1  56789999998888877


Q ss_pred             HHHhhccceeEEEechhhHH
Q psy7936          94 DINQTEANVHILINNAVYCI  113 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~  113 (222)
                      ..     ++|++|||||...
T Consensus        58 ~~-----~~d~vih~A~~~~   72 (315)
T 2ydy_A           58 DF-----QPHVIVHCAAERR   72 (315)
T ss_dssp             HH-----CCSEEEECC----
T ss_pred             hh-----CCCEEEECCcccC
Confidence            64     6899999999754

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=98.99  E-value=7.8e-10  Score=91.58  Aligned_cols=80  Identities=16%  Similarity=0.214  Sum_probs=62.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++++||||+|+||.++++.|++.|++|++++|+.....+..+.+..            ..+.++++|++|.+++.++++ 
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~------------~~v~~v~~Dl~d~~~l~~a~~-   78 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS------------LGAIIVKGELDEHEKLVELMK-   78 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH------------TTCEEEECCTTCHHHHHHHHT-
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc------------CCCEEEEecCCCHHHHHHHHc-
Confidence            5799999999999999999999999999999987522222222222            246788999999988887765 


Q ss_pred             HHhhccceeEEEechhhHH
Q psy7936          95 INQTEANVHILINNAVYCI  113 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~  113 (222)
                            .+|++||+++...
T Consensus        79 ------~~d~vi~~a~~~~   91 (318)
T 2r6j_A           79 ------KVDVVISALAFPQ   91 (318)
T ss_dssp             ------TCSEEEECCCGGG
T ss_pred             ------CCCEEEECCchhh
Confidence                  3799999998643

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=98.99  E-value=4.5e-10  Score=93.68  Aligned_cols=80  Identities=19%  Similarity=0.213  Sum_probs=62.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH--HHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA--SEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +|++|||||+|+||.++++.|++.|++|+++.|+.+......  ..+..           ..++.++++|+++.+++.++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~   77 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE-----------LGDLKIFRADLTDELSFEAP   77 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG-----------GSCEEEEECCTTTSSSSHHH
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC-----------CCcEEEEecCCCChHHHHHH
Confidence            678999999999999999999999999999999865422111  11211           23677889999999888876


Q ss_pred             HHHHHhhccceeEEEechhh
Q psy7936          92 AQDINQTEANVHILINNAVY  111 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~  111 (222)
                      ++       .+|++||+|+.
T Consensus        78 ~~-------~~D~Vih~A~~   90 (338)
T 2rh8_A           78 IA-------GCDFVFHVATP   90 (338)
T ss_dssp             HT-------TCSEEEEESSC
T ss_pred             Hc-------CCCEEEEeCCc
Confidence            54       46999999974

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=98.98  E-value=2e-09  Score=89.74  Aligned_cols=80  Identities=13%  Similarity=0.050  Sum_probs=59.5

Q ss_pred             EEEEecCCCchHHHHHHHHHhC---C---CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGI---G---AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~---g---~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +++||||+|+||.+++++|+++   |   ++|++++|+.....  .+.+....        ...++.++.+|+++.+++.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~--~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~   71 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVD--------ADPRLRFVHGDIRDAGLLA   71 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGT--------TCTTEEEEECCTTCHHHHH
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc--hhhhhhcc--------cCCCeEEEEcCCCCHHHHH
Confidence            5899999999999999999997   8   89999998642100  00011100        1346888999999998887


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +++       ..+|++||+||..
T Consensus        72 ~~~-------~~~d~Vih~A~~~   87 (337)
T 1r6d_A           72 REL-------RGVDAIVHFAAES   87 (337)
T ss_dssp             HHT-------TTCCEEEECCSCC
T ss_pred             HHh-------cCCCEEEECCCcc
Confidence            765       4789999999853

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=98.98  E-value=1.1e-09  Score=90.08  Aligned_cols=84  Identities=14%  Similarity=0.226  Sum_probs=62.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHH--HHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA--ETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .++++||||+|+||.++++.|++.|++|++++|+....  .+..+.+....         ...+.++++|++|.+++.++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~---------~~~v~~v~~D~~d~~~l~~~   74 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK---------ASGANIVHGSIDDHASLVEA   74 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH---------TTTCEEECCCTTCHHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH---------hCCCEEEEeccCCHHHHHHH
Confidence            46799999999999999999999999999999974321  11111121111         23577899999999888877


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++       .+|++||+++...
T Consensus        75 ~~-------~~d~vi~~a~~~~   89 (308)
T 1qyc_A           75 VK-------NVDVVISTVGSLQ   89 (308)
T ss_dssp             HH-------TCSEEEECCCGGG
T ss_pred             Hc-------CCCEEEECCcchh
Confidence            65       3799999998654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.98  E-value=2.2e-09  Score=87.38  Aligned_cols=143  Identities=10%  Similarity=-0.094  Sum_probs=90.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++++|||| |.||.+++++|.++|++|++++|+......+..                ..+.++.+|+++.+        
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------------~~~~~~~~D~~d~~--------   60 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----------------SGAEPLLWPGEEPS--------   60 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----------------TTEEEEESSSSCCC--------
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----------------CCCeEEEecccccc--------
Confidence            68999998 999999999999999999999999877654431                24667778887732        


Q ss_pred             HHhhccceeEEEechhhHHh-----h------------------------------------------hHHHHHHHHHhh
Q psy7936          95 INQTEANVHILINNAVYCIL-----S------------------------------------------NNILFYSILFYA  127 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l-----~------------------------------------------~~~~~~~~la~~  127 (222)
                          ...+|++||+|+....     .                                          +.+..+|..+.+
T Consensus        61 ----~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  136 (286)
T 3ius_A           61 ----LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQ  136 (286)
T ss_dssp             ----CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHH
T ss_pred             ----cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHH
Confidence                2456777777765420     0                                          024444443333


Q ss_pred             cC-C-CCeEEEEEeCCcccCCcCCCCCC---CCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         128 IP-G-KNVNVYAVHPGIVKTELGRYMDD---TYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       128 ~~-~-~gI~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                      +. . .|++++.+.||.+-.+.......   ....... ....  ...+...+|+|+.++.++..+.
T Consensus       137 ~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~--~~~~i~v~Dva~a~~~~~~~~~  200 (286)
T 3ius_A          137 QWQAVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRII-KPGQ--VFSRIHVEDIAQVLAASMARPD  200 (286)
T ss_dssp             HHHHSTTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEE-CTTC--CBCEEEHHHHHHHHHHHHHSCC
T ss_pred             HHHhhcCCCEEEEeccceECCCchHHHHHhcCCccccC-CCCc--ccceEEHHHHHHHHHHHHhCCC
Confidence            21 1 58999999999885543222111   0000000 0000  0115678999999999986653

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=98.97  E-value=2e-10  Score=95.05  Aligned_cols=83  Identities=17%  Similarity=0.129  Sum_probs=59.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ||++|||||+|+||.++++.|+++|++|+++.| +.+...... .+.....       ...++.++.+|+++.+++.+++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~   72 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVS-FLTNLPG-------ASEKLHFFNADLSNPDSFAAAI   72 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCH-HHHTSTT-------HHHHEEECCCCTTCGGGGHHHH
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHH-HHHhhhc-------cCCceEEEecCCCCHHHHHHHH
Confidence            578999999999999999999999999999998 653211110 1111000       0125778899999999988776


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      +       .+|++||+|+.
T Consensus        73 ~-------~~d~vih~A~~   84 (322)
T 2p4h_X           73 E-------GCVGIFHTASP   84 (322)
T ss_dssp             T-------TCSEEEECCCC
T ss_pred             c-------CCCEEEEcCCc
Confidence            5       36999999963

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.97  E-value=5.3e-10  Score=95.04  Aligned_cols=77  Identities=19%  Similarity=0.088  Sum_probs=62.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ..+++++||||+|+||.+++++|++.|++|++++|+.......                ...++.++.+|+++.+++.++
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------------~~~~v~~~~~Dl~d~~~~~~~   90 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE----------------DMFCDEFHLVDLRVMENCLKV   90 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG----------------GGTCSEEEECCTTSHHHHHHH
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh----------------ccCCceEEECCCCCHHHHHHH
Confidence            3568999999999999999999999999999999986532110                022567889999999888877


Q ss_pred             HHHHHhhccceeEEEechhh
Q psy7936          92 AQDINQTEANVHILINNAVY  111 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~  111 (222)
                      ++       .+|++||+||.
T Consensus        91 ~~-------~~d~Vih~A~~  103 (379)
T 2c5a_A           91 TE-------GVDHVFNLAAD  103 (379)
T ss_dssp             HT-------TCSEEEECCCC
T ss_pred             hC-------CCCEEEECcee
Confidence            64       57999999984

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=98.97  E-value=7.7e-10  Score=91.07  Aligned_cols=77  Identities=14%  Similarity=0.138  Sum_probs=62.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGI--GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +++++||||+|+||.+++++|++.  |++|++++|+.....     +..             ++.++.+|+++.+++.++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~-------------~~~~~~~D~~d~~~~~~~   63 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN-------------SGPFEVVNALDFNQIEHL   63 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH-------------SSCEEECCTTCHHHHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC-------------CCceEEecCCCHHHHHHH
Confidence            367999999999999999999998  899999999865421     111             234789999999999888


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++..     .+|++||+||...
T Consensus        64 ~~~~-----~~d~vih~a~~~~   80 (312)
T 2yy7_A           64 VEVH-----KITDIYLMAALLS   80 (312)
T ss_dssp             HHHT-----TCCEEEECCCCCH
T ss_pred             Hhhc-----CCCEEEECCccCC
Confidence            7654     6899999998643

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=98.96  E-value=2e-09  Score=89.21  Aligned_cols=79  Identities=18%  Similarity=0.267  Sum_probs=61.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh------hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV------EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ++++||||+|+||.++++.|++.|++|++++|+.      +..+. .+.+..            ..+.++++|++|.+++
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-l~~~~~------------~~v~~v~~D~~d~~~l   71 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQL-REEFRS------------MGVTIIEGEMEEHEKM   71 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHH-HHHHHH------------TTCEEEECCTTCHHHH
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHH-HHHhhc------------CCcEEEEecCCCHHHH
Confidence            5799999999999999999999999999999986      22222 222221            2467889999999888


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .++++       .+|++||+++...
T Consensus        72 ~~a~~-------~~d~vi~~a~~~~   89 (321)
T 3c1o_A           72 VSVLK-------QVDIVISALPFPM   89 (321)
T ss_dssp             HHHHT-------TCSEEEECCCGGG
T ss_pred             HHHHc-------CCCEEEECCCccc
Confidence            87765       3799999998653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.94  E-value=1.6e-09  Score=88.41  Aligned_cols=100  Identities=18%  Similarity=0.189  Sum_probs=73.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++++++||| +|+||.++++.|.+.|++|++++|+.+.+                    ...+.++.+|+++.+++.+++
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------------------~~~~~~~~~Dl~d~~~~~~~~   60 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------------------PAGVQTLIADVTRPDTLASIV   60 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC--------------------CTTCCEEECCTTCGGGCTTGG
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------------ccCCceEEccCCChHHHHHhh
Confidence            457899999 59999999999999999999999987641                    235678899999998877654


Q ss_pred             HHHHhhccceeEEEechhhHHhhh------HHHHHHHHHhhcCCCCe-EEEEEe
Q psy7936          93 QDINQTEANVHILINNAVYCILSN------NILFYSILFYAIPGKNV-NVYAVH  139 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~------~~~~~~~la~~~~~~gI-~v~~v~  139 (222)
                      +      +++|++||+||......      +...++.+.....+.++ ++..++
T Consensus        61 ~------~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~S  108 (286)
T 3gpi_A           61 H------LRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVS  108 (286)
T ss_dssp             G------GCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEE
T ss_pred             c------CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEc
Confidence            3      36899999999754111      34445556666555554 454443

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.93  E-value=2.9e-09  Score=87.75  Aligned_cols=79  Identities=16%  Similarity=0.193  Sum_probs=62.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-----hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-----EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++++||||||+||.++++.|++.|++|++++|+.     ++.+.+ +.+.            ...+.++++|++|.+++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~------------~~~~~~~~~D~~d~~~l   70 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK------------QLGAKLIEASLDDHQRL   70 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH------------TTTCEEECCCSSCHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH------------hCCeEEEeCCCCCHHHH
Confidence            35799999999999999999999999999999984     333222 2221            23567889999999888


Q ss_pred             HHHHHHHHhhccceeEEEechhhH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .++++       .+|++||+++..
T Consensus        71 ~~~~~-------~~d~vi~~a~~~   87 (313)
T 1qyd_A           71 VDALK-------QVDVVISALAGG   87 (313)
T ss_dssp             HHHHT-------TCSEEEECCCCS
T ss_pred             HHHHh-------CCCEEEECCccc
Confidence            87654       479999999865

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.91  E-value=2e-09  Score=90.05  Aligned_cols=80  Identities=16%  Similarity=0.155  Sum_probs=61.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGI--GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +++|||||+|+||.+++++|++.  |++|++++|+.....  .+.+...         ...++.++.+|+++.+++.+++
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~   73 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAI---------LGDRVELVVGDIADAELVDKLA   73 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGGG---------CSSSEEEEECCTTCHHHHHHHH
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCC--hhHHhhh---------ccCCeEEEECCCCCHHHHHHHh
Confidence            68999999999999999999998  889999999652100  0011111         1347889999999998888776


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +.       +|++||+||..
T Consensus        74 ~~-------~d~vih~A~~~   86 (348)
T 1oc2_A           74 AK-------ADAIVHYAAES   86 (348)
T ss_dssp             TT-------CSEEEECCSCC
T ss_pred             hc-------CCEEEECCccc
Confidence            53       49999999865

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.88  E-value=3.5e-09  Score=87.36  Aligned_cols=72  Identities=14%  Similarity=0.211  Sum_probs=58.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++++||||+|.||.++++.|.+.|++|++++|+.....     +            .  .+.++.+|++ .+++.++++ 
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~------------~--~~~~~~~Dl~-~~~~~~~~~-   61 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----I------------N--DYEYRVSDYT-LEDLINQLN-   61 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------------------------CCEEEECCCC-HHHHHHHTT-
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----C------------C--ceEEEEcccc-HHHHHHhhc-
Confidence            68999999999999999999999999999999843321     1            1  4568899999 888777654 


Q ss_pred             HHhhccceeEEEechhhHH
Q psy7936          95 INQTEANVHILINNAVYCI  113 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~  113 (222)
                            .+|++||+|+...
T Consensus        62 ------~~d~Vih~a~~~~   74 (311)
T 3m2p_A           62 ------DVDAVVHLAATRG   74 (311)
T ss_dssp             ------TCSEEEECCCCCC
T ss_pred             ------CCCEEEEccccCC
Confidence                  6899999998754

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.87  E-value=1.6e-09  Score=90.66  Aligned_cols=80  Identities=15%  Similarity=0.071  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+++++++||||+|+||.+++++|++.|++|++++|+.....+..+.+   .        ...++.++.+|+.+..   
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~--------~~~~~~~~~~D~~~~~---   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---I--------GHENFELINHDVVEPL---   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---T--------TCTTEEEEECCTTSCC---
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---c--------cCCceEEEeCccCChh---
Confidence            4567899999999999999999999999999999998753211111111   0        1346788899998752   


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                               ...+|++||+||..
T Consensus        89 ---------~~~~d~vih~A~~~  102 (343)
T 2b69_A           89 ---------YIEVDQIYHLASPA  102 (343)
T ss_dssp             ---------CCCCSEEEECCSCC
T ss_pred             ---------hcCCCEEEECcccc
Confidence                     34689999999864

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=98.87  E-value=3e-09  Score=86.81  Aligned_cols=65  Identities=22%  Similarity=0.330  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +.++++||||+|+||.++++.|+++|++|++++|+                               .+|+++.+++.+++
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------------------~~Dl~d~~~~~~~~   59 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-------------------------------DLDITNVLAVNKFF   59 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-------------------------------TCCTTCHHHHHHHH
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-------------------------------cCCCCCHHHHHHHH
Confidence            45789999999999999999999999999999985                               26999999988887


Q ss_pred             HHHHhhccceeEEEechhhHH
Q psy7936          93 QDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~  113 (222)
                      +..     ++|++||+||...
T Consensus        60 ~~~-----~~d~vih~A~~~~   75 (292)
T 1vl0_A           60 NEK-----KPNVVINCAAHTA   75 (292)
T ss_dssp             HHH-----CCSEEEECCCCCC
T ss_pred             Hhc-----CCCEEEECCccCC
Confidence            754     6899999998643

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=98.87  E-value=1.9e-09  Score=90.61  Aligned_cols=80  Identities=15%  Similarity=0.153  Sum_probs=62.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChh--HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVE--KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++|||||+|+||.++++.|++. |++|++++|+..  ..+.+ +.+.           ...++.++.+|+++.+++.+++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~   69 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-----------ESNRYNFEHADICDSAEITRIF   69 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-----------TCTTEEEEECCTTCHHHHHHHH
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-----------cCCCeEEEECCCCCHHHHHHHH
Confidence            4899999999999999999998 799999998652  12111 1110           1346889999999999999887


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +..     ++|+||||||..
T Consensus        70 ~~~-----~~d~vih~A~~~   84 (361)
T 1kew_A           70 EQY-----QPDAVMHLAAES   84 (361)
T ss_dssp             HHH-----CCSEEEECCSCC
T ss_pred             hhc-----CCCEEEECCCCc
Confidence            652     789999999864

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.86  E-value=4.9e-09  Score=88.46  Aligned_cols=80  Identities=15%  Similarity=0.161  Sum_probs=62.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecC-CCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLD-LASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~v~~~   91 (222)
                      .+++++||||||+||.++++.|++.|++|++++|+.+...  .+.+..           ...+.++.+| ++|.+++.++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-----------~~~v~~v~~D~l~d~~~l~~~   70 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-----------IPNVTLFQGPLLNNVPLMDTL   70 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-----------STTEEEEESCCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-----------cCCcEEEECCccCCHHHHHHH
Confidence            4678999999999999999999999999999999876542  122221           2257788999 9999888876


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++       .+|++|||++..
T Consensus        71 ~~-------~~d~Vi~~a~~~   84 (352)
T 1xgk_A           71 FE-------GAHLAFINTTSQ   84 (352)
T ss_dssp             HT-------TCSEEEECCCST
T ss_pred             Hh-------cCCEEEEcCCCC
Confidence            54       369999888654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=98.86  E-value=6.3e-09  Score=83.93  Aligned_cols=68  Identities=25%  Similarity=0.301  Sum_probs=57.5

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+|+||.+++++|++ |++|++++|+.+.        .           ++     +.+|+++.+++.++++.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~--------~-----------~~-----~~~Dl~~~~~~~~~~~~~   56 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI--------Q-----------GG-----YKLDLTDFPRLEDFIIKK   56 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC--------T-----------TC-----EECCTTSHHHHHHHHHHH
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC--------C-----------CC-----ceeccCCHHHHHHHHHhc
Confidence            589999999999999999995 8999999998741        0           12     789999999999888765


Q ss_pred             HhhccceeEEEechhhHH
Q psy7936          96 NQTEANVHILINNAVYCI  113 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~  113 (222)
                           ++|++|||||...
T Consensus        57 -----~~d~vi~~a~~~~   69 (273)
T 2ggs_A           57 -----RPDVIINAAAMTD   69 (273)
T ss_dssp             -----CCSEEEECCCCCC
T ss_pred             -----CCCEEEECCcccC
Confidence                 6899999998653

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=98.86  E-value=1.1e-09  Score=89.12  Aligned_cols=146  Identities=16%  Similarity=0.052  Sum_probs=95.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGI--GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      |+++||||+|+||.++++.|++.  |++|++++|+.+..+++.    .            ..+.++.+|++|.+++.+++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~------------~~~~~~~~D~~d~~~l~~~~   64 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D------------QGVEVRHGDYNQPESLQKAF   64 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H------------TTCEEEECCTTCHHHHHHHT
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h------------cCCeEEEeccCCHHHHHHHH
Confidence            46999999999999999999998  999999999887654332    1            14568899999998887765


Q ss_pred             HHHHhhccceeEEEechhhHHhh--h--------------------------------HHHHHHHHHhhc-CCCCeEEEE
Q psy7936          93 QDINQTEANVHILINNAVYCILS--N--------------------------------NILFYSILFYAI-PGKNVNVYA  137 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~--~--------------------------------~~~~~~~la~~~-~~~gI~v~~  137 (222)
                      +       .+|++||+|+...-.  |                                .+...|..+.++ ...|++++.
T Consensus        65 ~-------~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~~K~~~E~~~~~~~~~~~i  137 (287)
T 2jl1_A           65 A-------GVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIRTTNIPYTF  137 (287)
T ss_dssp             T-------TCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCCSTHHHHHHHHHHHHHHTTCCEEE
T ss_pred             h-------cCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCCchHHHHHHHHHHHHHcCCCeEE
Confidence            4       479999999852100  1                                123333332221 236899999


Q ss_pred             EeCCcccCCcCCCCCCCCCcchhhhH----HH--HHHHhcCChHHHHHHHHHHhcCC
Q psy7936         138 VHPGIVKTELGRYMDDTYFPGARTLG----RV--LMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       138 v~PG~v~T~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                      +.||++-++.....     .......    .+  -....+..++|+|+.++.++..+
T Consensus       138 lrp~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  189 (287)
T 2jl1_A          138 LRNALYTDFFVNEG-----LRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE  189 (287)
T ss_dssp             EEECCBHHHHSSGG-----GHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred             EECCEeccccchhh-----HHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC
Confidence            99998765431110     0000000    00  00012568999999999997554

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.86  E-value=2.5e-09  Score=88.23  Aligned_cols=72  Identities=19%  Similarity=0.194  Sum_probs=53.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |++|||||+|+||.+++++|++.|..|++..|+....+.                 ....+.++.+|+++ +++.++++ 
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~-~~~~~~~~-   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-----------------VNEAARLVKADLAA-DDIKDYLK-   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-----------------SCTTEEEECCCTTT-SCCHHHHT-
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-----------------cCCCcEEEECcCCh-HHHHHHhc-
Confidence            479999999999999999999999655555444432111                 13357889999998 77777654 


Q ss_pred             HHhhccceeEEEechhh
Q psy7936          95 INQTEANVHILINNAVY  111 (222)
Q Consensus        95 i~~~~~~id~li~~ag~  111 (222)
                            .+|++||+|+.
T Consensus        63 ------~~d~vih~a~~   73 (313)
T 3ehe_A           63 ------GAEEVWHIAAN   73 (313)
T ss_dssp             ------TCSEEEECCCC
T ss_pred             ------CCCEEEECCCC
Confidence                  57999999984

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.86  E-value=2e-09  Score=85.35  Aligned_cols=79  Identities=13%  Similarity=0.254  Sum_probs=58.8

Q ss_pred             CCCEEEEecC----------------CCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEE
Q psy7936          13 DGKTVIITGC----------------NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVL   76 (222)
Q Consensus        13 ~~k~~lVtGa----------------s~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   76 (222)
                      .||++|||||                +|++|.++|+.|+++|++|++++|......        .         ....+ 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~---------~~~~~-   63 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------E---------PHPNL-   63 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------C---------CCTTE-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------c---------CCCCe-
Confidence            4899999999                778999999999999999999998753100        0         01122 


Q ss_pred             EEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          77 IKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        77 ~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                          |+.+..++.+..+.+.+.++.+|++|+|||+..
T Consensus        64 ----~~~~v~s~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           64 ----SIREITNTKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             ----EEEECCSHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             ----EEEEHhHHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence                333444666677777777889999999999765

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.86  E-value=4.6e-09  Score=87.55  Aligned_cols=75  Identities=13%  Similarity=0.060  Sum_probs=59.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh-hhHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF-KSIRDCA   92 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~   92 (222)
                      ++++||||+|+||.+++++|+++ |++|++++|+.+..+++.               ...++.++.+|+++. +.+.+++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~---------------~~~~~~~~~~D~~~~~~~~~~~~   65 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL---------------NHPHFHFVEGDISIHSEWIEYHV   65 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT---------------TCTTEEEEECCTTTCSHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh---------------cCCCeEEEeccccCcHHHHHhhc
Confidence            36999999999999999999998 899999999876543211               134678899999984 4566555


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      +       .+|++||+||.
T Consensus        66 ~-------~~d~vih~A~~   77 (345)
T 2bll_A           66 K-------KCDVVLPLVAI   77 (345)
T ss_dssp             H-------HCSEEEECBCC
T ss_pred             c-------CCCEEEEcccc
Confidence            4       46999999974

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=98.83  E-value=2.6e-09  Score=88.03  Aligned_cols=76  Identities=17%  Similarity=0.196  Sum_probs=59.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      ++|||||+|+||.+++++|+++|++|++++|......+       .         ....+.++.+|+++.+++.++++..
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~---------~~~~~~~~~~Dl~~~~~~~~~~~~~   65 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE-------N---------VPKGVPFFRVDLRDKEGVERAFREF   65 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG-------G---------SCTTCCEECCCTTCHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh-------h---------cccCeEEEECCCCCHHHHHHHHHhc
Confidence            68999999999999999999999999999985431100       0         0124567899999999998887642


Q ss_pred             HhhccceeEEEechhhH
Q psy7936          96 NQTEANVHILINNAVYC  112 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~  112 (222)
                           .+|++||+|+..
T Consensus        66 -----~~d~vi~~a~~~   77 (311)
T 2p5y_A           66 -----RPTHVSHQAAQA   77 (311)
T ss_dssp             -----CCSEEEECCSCC
T ss_pred             -----CCCEEEECcccc
Confidence                 689999999753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=98.83  E-value=6.3e-09  Score=85.84  Aligned_cols=71  Identities=15%  Similarity=0.170  Sum_probs=58.6

Q ss_pred             EEEEecCCCchHHHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGI--GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      ++|||||+|+||.+++++|++.  |++|++++|+.....                     .+.++.+|+++.+++.++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---------------------~~~~~~~D~~d~~~~~~~~~   59 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---------------------GIKFITLDVSNRDEIDRAVE   59 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---------------------TCCEEECCTTCHHHHHHHHH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---------------------CceEEEecCCCHHHHHHHHh
Confidence            3899999999999999999998  789999998754211                     23478899999999988876


Q ss_pred             HHHhhccceeEEEechhhH
Q psy7936          94 DINQTEANVHILINNAVYC  112 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~  112 (222)
                      ..     .+|++||+|+..
T Consensus        60 ~~-----~~d~vih~a~~~   73 (317)
T 3ajr_A           60 KY-----SIDAIFHLAGIL   73 (317)
T ss_dssp             HT-----TCCEEEECCCCC
T ss_pred             hc-----CCcEEEECCccc
Confidence            42     689999999864

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=98.82  E-value=3.4e-09  Score=86.32  Aligned_cols=62  Identities=29%  Similarity=0.414  Sum_probs=55.1

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+|+||.++++.|.++|++|++++|.                               ++|+++.+++.++++..
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------------------~~D~~d~~~~~~~~~~~   55 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-------------------------------LLDITNISQVQQVVQEI   55 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-------------------------------TSCTTCHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-------------------------------ccCCCCHHHHHHHHHhc
Confidence            79999999999999999999999999999981                               26999999999888765


Q ss_pred             HhhccceeEEEechhhHH
Q psy7936          96 NQTEANVHILINNAVYCI  113 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~  113 (222)
                           ++|++||+||...
T Consensus        56 -----~~d~vi~~a~~~~   68 (287)
T 3sc6_A           56 -----RPHIIIHCAAYTK   68 (287)
T ss_dssp             -----CCSEEEECCCCCC
T ss_pred             -----CCCEEEECCcccC
Confidence                 6899999998754

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.82  E-value=4.8e-09  Score=92.62  Aligned_cols=91  Identities=12%  Similarity=0.133  Sum_probs=66.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh---HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE---KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .++++||||||+||.+++++|.+.|++|++++|+..   ..+++.+.++........ .....++.++.+|+++.+++. 
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETV-EMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHH-HHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccc-hhccCceEEEecCCcccccCC-
Confidence            478999999999999999999999999999999876   344444444332100000 001457899999999988777 


Q ss_pred             HHHHHHhhccceeEEEechhhHH
Q psy7936          91 CAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~  113 (222)
                             ....+|+|||||+...
T Consensus       228 -------~~~~~D~Vih~Aa~~~  243 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTD  243 (508)
T ss_dssp             -------CSSCCSEEEECCCC--
T ss_pred             -------CccCCCEEEECCceec
Confidence                   3468999999999764

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.82  E-value=1.9e-08  Score=70.74  Aligned_cols=75  Identities=17%  Similarity=0.195  Sum_probs=60.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +++++|+|+ |++|..+++.|.+.| ++|++++|+.++.+.+.    .            ..+.++.+|+.+.+++.+++
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~------------~~~~~~~~d~~~~~~~~~~~   67 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R------------MGVATKQVDAKDEAGLAKAL   67 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T------------TTCEEEECCTTCHHHHHHHT
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h------------CCCcEEEecCCCHHHHHHHH
Confidence            468999999 999999999999999 79999999998776554    1            13456788999987776654


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +       .+|++|++++..
T Consensus        68 ~-------~~d~vi~~~~~~   80 (118)
T 3ic5_A           68 G-------GFDAVISAAPFF   80 (118)
T ss_dssp             T-------TCSEEEECSCGG
T ss_pred             c-------CCCEEEECCCch
Confidence            2       679999999754

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.81  E-value=3.1e-08  Score=85.21  Aligned_cols=84  Identities=23%  Similarity=0.349  Sum_probs=71.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCC---CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIG---AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ++++|+|| ||||+++++.|++.|   ..|++++|+.++++++.+.+...         .+.++..+.+|+++.+++.++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~---------~~~~~~~~~~D~~d~~~l~~~   71 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAK---------GYGEIDITTVDADSIEELVAL   71 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHT---------TCCCCEEEECCTTCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhh---------cCCceEEEEecCCCHHHHHHH
Confidence            47899999 899999999999998   49999999999999988887653         234678899999999999998


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++..     ++|++|||++...
T Consensus        72 l~~~-----~~DvVin~ag~~~   88 (405)
T 4ina_A           72 INEV-----KPQIVLNIALPYQ   88 (405)
T ss_dssp             HHHH-----CCSEEEECSCGGG
T ss_pred             HHhh-----CCCEEEECCCccc
Confidence            8775     6899999998653

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=98.81  E-value=2.4e-09  Score=86.99  Aligned_cols=150  Identities=12%  Similarity=0.050  Sum_probs=92.4

Q ss_pred             EEEEecCCCchHHHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGI--GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +++||||+|+||.++++.|++.  |++|++++|+.+..+++.    .            ..+.++.+|++|.+++.++++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~------------~~~~~~~~D~~d~~~~~~~~~   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A------------QGITVRQADYGDEAALTSALQ   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H------------TTCEEEECCTTCHHHHHHHTT
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c------------CCCeEEEcCCCCHHHHHHHHh
Confidence            3799999999999999999998  999999999877554332    1            145678999999988877654


Q ss_pred             HHHhhccceeEEEechhhHHhhh--------------------------------HHHHHHHHHhhc-CCCCeEEEEEeC
Q psy7936          94 DINQTEANVHILINNAVYCILSN--------------------------------NILFYSILFYAI-PGKNVNVYAVHP  140 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~~--------------------------------~~~~~~~la~~~-~~~gI~v~~v~P  140 (222)
                             .+|++||+||...-.+                                .+...|..+.++ ...|++++.+.|
T Consensus        65 -------~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp  137 (286)
T 2zcu_A           65 -------GVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADSGIVYTLLRN  137 (286)
T ss_dssp             -------TCSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTTTTCCSTTHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred             -------CCCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCcchhHHHHHHHHHHHHHcCCCeEEEeC
Confidence                   4699999998632000                                122223222221 125899999999


Q ss_pred             CcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         141 GIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       141 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                      |++.+++..................-....+.+++|+|+.+++++..+
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  185 (286)
T 2zcu_A          138 GWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEA  185 (286)
T ss_dssp             CCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSS
T ss_pred             hHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCC
Confidence            987655421110000000000000000111568999999999997654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=98.80  E-value=2.2e-09  Score=90.30  Aligned_cols=85  Identities=12%  Similarity=0.141  Sum_probs=59.2

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +..+++++++||||+|+||.+++++|++.| ++|++++|+.....     +...         ....   +.+|+++.+.
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~~~~---------~~~~---~~~d~~~~~~  103 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNL---------VDLN---IADYMDKEDF  103 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-----GGGT---------TTSC---CSEEEEHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-----hhcc---------cCce---EeeecCcHHH
Confidence            445678899999999999999999999999 89999999765321     0010         1112   6789999888


Q ss_pred             HHHHHHHHHhhccceeEEEechhhH
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +..+++.  ..++++|++||+||..
T Consensus       104 ~~~~~~~--~~~~~~d~Vih~A~~~  126 (357)
T 2x6t_A          104 LIQIMAG--EEFGDVEAIFHEGACS  126 (357)
T ss_dssp             HHHHHTT--CCCSSCCEEEECCSCC
T ss_pred             HHHHHhh--cccCCCCEEEECCccc
Confidence            8877653  1246799999999854

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.79  E-value=1.3e-08  Score=83.24  Aligned_cols=92  Identities=12%  Similarity=0.071  Sum_probs=69.8

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +++||||+|+||.+++++|. .|++|++++|+..                           ++.+|+++.+++.++++..
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~---------------------------~~~~D~~d~~~~~~~~~~~   53 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK---------------------------EFCGDFSNPKGVAETVRKL   53 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS---------------------------SSCCCTTCHHHHHHHHHHH
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc---------------------------cccccCCCHHHHHHHHHhc
Confidence            69999999999999999999 8999999998761                           2568999999988887654


Q ss_pred             HhhccceeEEEechhhHHhh-----------hHHHHHHHHHhhcCCCCeEEEEEeC
Q psy7936          96 NQTEANVHILINNAVYCILS-----------NNILFYSILFYAIPGKNVNVYAVHP  140 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l~-----------~~~~~~~~la~~~~~~gI~v~~v~P  140 (222)
                           ++|++||+||.....           .+...+..+.....+.|+++..++-
T Consensus        54 -----~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  104 (299)
T 1n2s_A           54 -----RPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYST  104 (299)
T ss_dssp             -----CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEE
T ss_pred             -----CCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEec
Confidence                 689999999864311           1233445555555566777766654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=98.79  E-value=1.2e-08  Score=84.33  Aligned_cols=65  Identities=15%  Similarity=0.171  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+++++||||+|+||.+++++|++.|++|++++|+.                              .+|+++.+++.+++
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~------------------------------~~D~~d~~~~~~~~   51 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------------------ELNLLDSRAVHDFF   51 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------------------TCCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc------------------------------cCCccCHHHHHHHH
Confidence            457899999999999999999999999999888752                              15999998888887


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +..     .+|++||+||..
T Consensus        52 ~~~-----~~d~vih~a~~~   66 (321)
T 1e6u_A           52 ASE-----RIDQVYLAAAKV   66 (321)
T ss_dssp             HHH-----CCSEEEECCCCC
T ss_pred             Hhc-----CCCEEEEcCeec
Confidence            654     689999999865

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.79  E-value=3e-09  Score=89.38  Aligned_cols=78  Identities=17%  Similarity=0.105  Sum_probs=63.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCC-----CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIG-----AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      +++++||||+|+||.+++++|+++|     ++|++++|+.....        .         ...++.++.+|+++.+++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------~---------~~~~~~~~~~Dl~d~~~~   63 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------H---------EDNPINYVQCDISDPDDS   63 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------C---------CSSCCEEEECCTTSHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------c---------ccCceEEEEeecCCHHHH
Confidence            4689999999999999999999999     99999999865321        0         134678889999999888


Q ss_pred             HHHHHHHHhhccceeEEEechhhH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .++++.+    .++|++||+||..
T Consensus        64 ~~~~~~~----~~~d~vih~a~~~   83 (364)
T 2v6g_A           64 QAKLSPL----TDVTHVFYVTWAN   83 (364)
T ss_dssp             HHHHTTC----TTCCEEEECCCCC
T ss_pred             HHHHhcC----CCCCEEEECCCCC
Confidence            8776543    2489999999853

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.74  E-value=8.5e-09  Score=77.20  Aligned_cols=84  Identities=8%  Similarity=0.080  Sum_probs=66.2

Q ss_pred             hHHHHHHHHHhCCCEEEEEeCChhHHH---HHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh--hhHHHHHHHHHhhcc
Q psy7936          26 IGKVTAQTLYGIGAKVIMACRDVEKAE---TTASEIRKHFEVATSEDKKPGEVLIKKLDLASF--KSIRDCAQDINQTEA  100 (222)
Q Consensus        26 iG~~~a~~l~~~g~~v~~~~r~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~i~~~~~  100 (222)
                      ++.++++.|++.|++|++..|+.....   +..+.++.          .+.++..+.+|++++  ++++++++.+.+.++
T Consensus        28 p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~----------~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G   97 (157)
T 3gxh_A           28 PNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ----------AGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKG   97 (157)
T ss_dssp             CCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH----------TTCEEEECCCCTTSCCHHHHHHHHHHHHHTTT
T ss_pred             CCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH----------cCCeEEEecCCCCCCCHHHHHHHHHHHHhcCC
Confidence            679999999999999999988764432   23444444          367899999999999  999999999988889


Q ss_pred             ceeEEEechhhHHhhhHHHH
Q psy7936         101 NVHILINNAVYCILSNNILF  120 (222)
Q Consensus       101 ~id~li~~ag~~~l~~~~~~  120 (222)
                      + |+||||||+.....+..+
T Consensus        98 ~-dVLVnnAgg~r~~~l~~~  116 (157)
T 3gxh_A           98 K-DVLVHCLANYRASAFAYL  116 (157)
T ss_dssp             S-CEEEECSBSHHHHHHHHH
T ss_pred             C-CEEEECCCCCCHHHHHHH
Confidence            9 999999998654333333

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=98.73  E-value=1.1e-08  Score=93.14  Aligned_cols=79  Identities=13%  Similarity=0.061  Sum_probs=61.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh-HH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS-IR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~   89 (222)
                      +++++++||||+|+||.+++++|++. |++|++++|+.....++.               ...++.++.+|+++.++ +.
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~---------------~~~~v~~v~~Dl~d~~~~~~  377 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL---------------NHPHFHFVEGDISIHSEWIE  377 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT---------------TCTTEEEEECCTTTCHHHHH
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc---------------cCCceEEEECCCCCcHHHHH
Confidence            46789999999999999999999998 899999999876432211               13467889999999765 55


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++++       .+|++||+||..
T Consensus       378 ~~~~-------~~D~Vih~Aa~~  393 (660)
T 1z7e_A          378 YHVK-------KCDVVLPLVAIA  393 (660)
T ss_dssp             HHHH-------HCSEEEECCCCC
T ss_pred             Hhhc-------CCCEEEECceec
Confidence            4443       579999999853

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.64  E-value=1.7e-08  Score=82.87  Aligned_cols=82  Identities=27%  Similarity=0.404  Sum_probs=61.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|+++|||++ |+|+++++.|++.| +|++++|+.++++++.+.+....         ... ..+.+|+.+.    
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~---------~~~-~~~~~d~~~~----  187 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL---------NKK-FGEEVKFSGL----  187 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH---------TCC-HHHHEEEECT----
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc---------ccc-cceeEEEeeH----
Confidence            35789999999997 99999999999999 99999999998888887775421         000 0123344442    


Q ss_pred             HHHHHHHhhccceeEEEechhhHH
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                            .+..+.+|++|||+|...
T Consensus       188 ------~~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          188 ------DVDLDGVDIIINATPIGM  205 (287)
T ss_dssp             ------TCCCTTCCEEEECSCTTC
T ss_pred             ------HHhhCCCCEEEECCCCCC
Confidence                  344578999999998654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.62  E-value=8e-08  Score=80.18  Aligned_cols=80  Identities=19%  Similarity=0.241  Sum_probs=61.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|||+++|||.++++.+...|++|+++++++++++.+ +.+             +..   ..+|.++.+++.+.+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-------------g~~---~~~d~~~~~~~~~~~  207 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-------------GFD---AAFNYKTVNSLEEAL  207 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-------------TCS---EEEETTSCSCHHHHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-------------CCc---EEEecCCHHHHHHHH
Confidence            578999999999999999999999999999999998876554 222             212   224777645666655


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .++..  +.+|++|+|+|.
T Consensus       208 ~~~~~--~~~d~vi~~~g~  224 (333)
T 1v3u_A          208 KKASP--DGYDCYFDNVGG  224 (333)
T ss_dssp             HHHCT--TCEEEEEESSCH
T ss_pred             HHHhC--CCCeEEEECCCh
Confidence            55543  589999999995

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.56  E-value=2e-07  Score=71.87  Aligned_cols=80  Identities=19%  Similarity=0.195  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++||||++|||.++++.+...|++|++++|+++..+.+.    +.          +...   .+|.++.+....+.
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~----------g~~~---~~d~~~~~~~~~~~  100 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RL----------GVEY---VGDSRSVDFADEIL  100 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TT----------CCSE---EEETTCSTHHHHHH
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc----------CCCE---EeeCCcHHHHHHHH
Confidence            5789999999999999999999999999999999987654432    11          2221   23666654444433


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      +.. . ...+|++|+|+|.
T Consensus       101 ~~~-~-~~~~D~vi~~~g~  117 (198)
T 1pqw_A          101 ELT-D-GYGVDVVLNSLAG  117 (198)
T ss_dssp             HHT-T-TCCEEEEEECCCT
T ss_pred             HHh-C-CCCCeEEEECCch
Confidence            322 1 1369999999984

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.55  E-value=1.5e-07  Score=82.00  Aligned_cols=79  Identities=22%  Similarity=0.312  Sum_probs=61.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |++|+++|+| +|++|+++++.|++.|++|++++|+.++++++.+.+              ..+..+.+|+++.+++.++
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~--------------~~~~~~~~Dv~d~~~l~~~   65 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV--------------QHSTPISLDVNDDAALDAE   65 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC--------------TTEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc--------------CCceEEEeecCCHHHHHHH
Confidence            3568899998 799999999999999999999999987765443211              1356788999998887766


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++       .+|++|||++..
T Consensus        66 l~-------~~DvVIn~a~~~   79 (450)
T 1ff9_A           66 VA-------KHDLVISLIPYT   79 (450)
T ss_dssp             HT-------TSSEEEECCC--
T ss_pred             Hc-------CCcEEEECCccc
Confidence            53       579999999864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.54  E-value=4.8e-08  Score=79.98  Aligned_cols=70  Identities=16%  Similarity=0.103  Sum_probs=54.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+++++|||||+|+||.+++++|.+.|+      +..            .         ....+.++.+|+++.+++.+
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~------------~---------~~~~~~~~~~D~~d~~~~~~   55 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG------------E---------DWVFVSSKDADLTDTAQTRA   55 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT------------C---------EEEECCTTTCCTTSHHHHHH
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc------------c---------cccccCceecccCCHHHHHH
Confidence            36778999999999999999999999997      000            0         01133445789999999988


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +++..     ++|++||+|+..
T Consensus        56 ~~~~~-----~~d~Vih~A~~~   72 (319)
T 4b8w_A           56 LFEKV-----QPTHVIHLAAMV   72 (319)
T ss_dssp             HHHHS-----CCSEEEECCCCC
T ss_pred             HHhhc-----CCCEEEECceec
Confidence            87753     689999999863

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.53  E-value=3.8e-09  Score=87.10  Aligned_cols=38  Identities=24%  Similarity=0.145  Sum_probs=34.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      +.+++++||||+|+||.++++.|++.|++|++++|+..
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            45789999999999999999999999999999999765

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.52  E-value=6.1e-08  Score=79.46  Aligned_cols=78  Identities=10%  Similarity=0.078  Sum_probs=56.8

Q ss_pred             EEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      +++||||+|+||.+++++|++.| ++|++++|+.....  ...+.            ...   +.+|+++.+.+..+++.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~------------~~~---~~~d~~~~~~~~~~~~~   63 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV------------DLN---IADYMDKEDFLIQIMAG   63 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH------------TSC---CSEEEEHHHHHHHHHTT
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC------------cce---eccccccHHHHHHHHhc
Confidence            48999999999999999999999 89999999765321  01111            112   67899888877766542


Q ss_pred             HHhhccceeEEEechhhH
Q psy7936          95 INQTEANVHILINNAVYC  112 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~  112 (222)
                      ..  .+++|++||+||..
T Consensus        64 ~~--~~~~d~vi~~a~~~   79 (310)
T 1eq2_A           64 EE--FGDVEAIFHEGACS   79 (310)
T ss_dssp             CC--CSSCCEEEECCSCC
T ss_pred             cc--cCCCcEEEECcccc
Confidence            11  23689999999854

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.48  E-value=7.8e-07  Score=73.80  Aligned_cols=83  Identities=19%  Similarity=0.215  Sum_probs=62.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC---hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD---VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+.+....         +..+.  ..++.+.
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~---------~~~~~--~~~~~~~  217 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT---------DCKAQ--LFDIEDH  217 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS---------SCEEE--EEETTCH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc---------CCceE--EeccchH
Confidence            4678999999998 7999999999999999 99999999   888888888887642         22333  3355554


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhh
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      +++.+.+       ...|++||+...
T Consensus       218 ~~l~~~l-------~~aDiIINaTp~  236 (315)
T 3tnl_A          218 EQLRKEI-------AESVIFTNATGV  236 (315)
T ss_dssp             HHHHHHH-------HTCSEEEECSST
T ss_pred             HHHHhhh-------cCCCEEEECccC
Confidence            4444332       246999998753

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.39  E-value=3.6e-07  Score=74.32  Aligned_cols=78  Identities=18%  Similarity=0.277  Sum_probs=58.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+.+...          + .+.  ..|+   ++  
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~----------~-~~~--~~~~---~~--  175 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT----------G-SIQ--ALSM---DE--  175 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG----------S-SEE--ECCS---GG--
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc----------C-Cee--EecH---HH--
Confidence            3568999999998 79999999999999999999999999888877665321          1 221  1333   21  


Q ss_pred             HHHHHHHhhccceeEEEechhhHH
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                           +.+  +..|++|||++...
T Consensus       176 -----~~~--~~~DivVn~t~~~~  192 (271)
T 1nyt_A          176 -----LEG--HEFDLIINATSSGI  192 (271)
T ss_dssp             -----GTT--CCCSEEEECCSCGG
T ss_pred             -----hcc--CCCCEEEECCCCCC
Confidence                 111  57999999998654

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.39  E-value=1.4e-06  Score=73.03  Aligned_cols=80  Identities=26%  Similarity=0.302  Sum_probs=60.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+|+++|||..+++.+...|++|++++|++++.+.+. .+             +..   ..+|.++.+++.+.+
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~-------------g~~---~~~d~~~~~~~~~~~  231 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SI-------------GGE---VFIDFTKEKDIVGAV  231 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HT-------------TCC---EEEETTTCSCHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-Hc-------------CCc---eEEecCccHhHHHHH
Confidence            5789999999999999999999999999999999988764332 21             222   123777666676666


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .++...  .+|++|+|+|.
T Consensus       232 ~~~~~~--~~D~vi~~~g~  248 (347)
T 2hcy_A          232 LKATDG--GAHGVINVSVS  248 (347)
T ss_dssp             HHHHTS--CEEEEEECSSC
T ss_pred             HHHhCC--CCCEEEECCCc
Confidence            665443  79999999985

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.36  E-value=8.9e-07  Score=77.39  Aligned_cols=80  Identities=21%  Similarity=0.293  Sum_probs=61.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++++++++|+|+ ||+|++++..|++. |++|++++|+.++++++.+.   .            .+..+.+|+.+.+++
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~------------~~~~~~~D~~d~~~l   82 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---S------------GSKAISLDVTDDSAL   82 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---G------------TCEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---c------------CCcEEEEecCCHHHH
Confidence            4567889999998 99999999999998 67999999999887765432   1            234567899988877


Q ss_pred             HHHHHHHHhhccceeEEEechhhH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .++++       .+|++||+++..
T Consensus        83 ~~~l~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           83 DKVLA-------DNDVVISLIPYT   99 (467)
T ss_dssp             HHHHH-------TSSEEEECSCGG
T ss_pred             HHHHc-------CCCEEEECCchh
Confidence            76554       579999999865

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.35  E-value=1.1e-06  Score=73.53  Aligned_cols=81  Identities=14%  Similarity=0.198  Sum_probs=59.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+|+++|||..+++.+...|++|+++++++++++.+.+.+             +...   .+|.++..++.+.+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-------------g~~~---~~d~~~~~~~~~~~  218 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-------------GFDD---AFNYKEESDLTAAL  218 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-------------CCSE---EEETTSCSCSHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------------CCce---EEecCCHHHHHHHH
Confidence            5789999999999999999999999999999999988765543222             2221   23666544555555


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      ..+..  +.+|++|+|+|.
T Consensus       219 ~~~~~--~~~d~vi~~~g~  235 (345)
T 2j3h_A          219 KRCFP--NGIDIYFENVGG  235 (345)
T ss_dssp             HHHCT--TCEEEEEESSCH
T ss_pred             HHHhC--CCCcEEEECCCH
Confidence            54432  579999999985

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.34  E-value=6.5e-07  Score=64.88  Aligned_cols=79  Identities=15%  Similarity=0.111  Sum_probs=56.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+++++++|+|+ |++|..+++.|.+.|++|++++++++..+.+.    .          .+  ..++..|.++.+.+.+
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~----------~~--~~~~~~d~~~~~~l~~   65 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----S----------YA--THAVIANATEENELLS   65 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----T----------TC--SEEEECCTTCHHHHHT
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----------hC--CEEEEeCCCCHHHHHh
Confidence            356778999998 99999999999999999999999887554321    1          11  2456788887654433


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +      .....|++|++++..
T Consensus        66 ~------~~~~~d~vi~~~~~~   81 (144)
T 2hmt_A           66 L------GIRNFEYVIVAIGAN   81 (144)
T ss_dssp             T------TGGGCSEEEECCCSC
T ss_pred             c------CCCCCCEEEECCCCc
Confidence            2      124689999999863

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.31  E-value=3.2e-06  Score=70.47  Aligned_cols=80  Identities=19%  Similarity=0.216  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+||++|||.++++.+...|++|++++|++++++.+.+ +             +...   .+|.++.+..+.+.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~-------------g~~~---~~d~~~~~~~~~i~  207 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L-------------GCHH---TINYSTQDFAEVVR  207 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-------------TCSE---EEETTTSCHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-------------CCCE---EEECCCHHHHHHHH
Confidence            57899999999999999999999999999999999887665532 2             1121   23665544444333


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      +.. . ...+|++|+|+|.
T Consensus       208 ~~~-~-~~~~d~vi~~~g~  224 (333)
T 1wly_A          208 EIT-G-GKGVDVVYDSIGK  224 (333)
T ss_dssp             HHH-T-TCCEEEEEECSCT
T ss_pred             HHh-C-CCCCeEEEECCcH
Confidence            322 1 1369999999996

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.31  E-value=5.2e-07  Score=80.02  Aligned_cols=47  Identities=40%  Similarity=0.485  Sum_probs=37.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      ++++|+++|||| ||+|++++..|++.|++|++++|+.++++++.+.+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~  407 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI  407 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc
Confidence            467899999999 59999999999999999999999998887776554

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.31  E-value=1.4e-06  Score=72.37  Aligned_cols=79  Identities=13%  Similarity=0.173  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++||||++|||..+++.+...|++|+++++++++++.+.+ +             +...   .+|.++.+..+.+.
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-------------g~~~---~~~~~~~~~~~~~~  202 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-------------GAWQ---VINYREEDLVERLK  202 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-------------TCSE---EEETTTSCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-------------CCCE---EEECCCccHHHHHH
Confidence            57899999999999999999999999999999999887665533 2             1121   23665554444443


Q ss_pred             HHHHhhccceeEEEechh
Q psy7936          93 QDINQTEANVHILINNAV  110 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag  110 (222)
                      +.. . ...+|++|+|+|
T Consensus       203 ~~~-~-~~~~D~vi~~~g  218 (327)
T 1qor_A          203 EIT-G-GKKVRVVYDSVG  218 (327)
T ss_dssp             HHT-T-TCCEEEEEECSC
T ss_pred             HHh-C-CCCceEEEECCc
Confidence            322 1 136999999999

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.29  E-value=6e-06  Score=67.51  Aligned_cols=51  Identities=25%  Similarity=0.335  Sum_probs=46.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+...
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~  174 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhh
Confidence            3578999999998 7999999999999999 8999999999999998888764

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.28  E-value=2.4e-06  Score=62.16  Aligned_cols=75  Identities=17%  Similarity=0.112  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +++.++|+|+ |.+|..+++.|.+.|++|++++++++..+++.+    .            .+.++..|.++.+.++++ 
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~------------~~~~~~gd~~~~~~l~~~-   66 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E------------GFDAVIADPTDESFYRSL-   66 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T------------TCEEEECCTTCHHHHHHS-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C------------CCcEEECCCCCHHHHHhC-
Confidence            4567999998 779999999999999999999999987665542    1            245678999998776653 


Q ss_pred             HHHHhhccceeEEEechh
Q psy7936          93 QDINQTEANVHILINNAV  110 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag  110 (222)
                           .....|++|.+.+
T Consensus        67 -----~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 -----DLEGVSAVLITGS   79 (141)
T ss_dssp             -----CCTTCSEEEECCS
T ss_pred             -----CcccCCEEEEecC
Confidence                 1246799999887

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.26  E-value=3.2e-06  Score=71.14  Aligned_cols=81  Identities=14%  Similarity=0.153  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+||++|||..+++.+...|++|+++++++++++.+ +.+             +..   ..+|..+.+..+.+.
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-------------g~~---~~~~~~~~~~~~~~~  224 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-------------GAA---AGFNYKKEDFSEATL  224 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-------------TCS---EEEETTTSCHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-------------CCc---EEEecCChHHHHHHH
Confidence            578999999999999999999999999999999998877655 222             112   123555544333332


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +.. . ...+|++|+|+|..
T Consensus       225 ~~~-~-~~~~d~vi~~~G~~  242 (354)
T 2j8z_A          225 KFT-K-GAGVNLILDCIGGS  242 (354)
T ss_dssp             HHT-T-TSCEEEEEESSCGG
T ss_pred             HHh-c-CCCceEEEECCCch
Confidence            221 1 13699999999964

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.25  E-value=1.6e-06  Score=72.93  Aligned_cols=80  Identities=21%  Similarity=0.294  Sum_probs=57.2

Q ss_pred             CC--CEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          13 DG--KTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        13 ~~--k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .|  ++++|+|+++|||..+++.+...|+ +|+++++++++.+.+.+.+             +..   ..+|.++. ++.
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-------------g~~---~~~d~~~~-~~~  220 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-------------GFD---AAINYKKD-NVA  220 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-------------CCS---EEEETTTS-CHH
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-------------CCc---eEEecCch-HHH
Confidence            46  8999999999999999999999999 9999999988766554322             212   12466553 333


Q ss_pred             HHHHHHHhhccceeEEEechhh
Q psy7936          90 DCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~  111 (222)
                      +.+.+...  +.+|++|+|+|.
T Consensus       221 ~~~~~~~~--~~~d~vi~~~G~  240 (357)
T 2zb4_A          221 EQLRESCP--AGVDVYFDNVGG  240 (357)
T ss_dssp             HHHHHHCT--TCEEEEEESCCH
T ss_pred             HHHHHhcC--CCCCEEEECCCH
Confidence            33333322  279999999994

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.23  E-value=2.5e-06  Score=71.18  Aligned_cols=80  Identities=19%  Similarity=0.250  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+|+++|||..+++.+...|++|+++++++++.+.+.+.+             +....   .|..+.+ +.+.+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-------------g~~~~---~~~~~~~-~~~~~  211 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-------------GFDGA---IDYKNED-LAAGL  211 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-------------CCSEE---EETTTSC-HHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------------CCCEE---EECCCHH-HHHHH
Confidence            5889999999999999999999999999999999998776553332             22222   3555533 33333


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .+..  .+.+|++|+|+|.
T Consensus       212 ~~~~--~~~~d~vi~~~g~  228 (336)
T 4b7c_A          212 KREC--PKGIDVFFDNVGG  228 (336)
T ss_dssp             HHHC--TTCEEEEEESSCH
T ss_pred             HHhc--CCCceEEEECCCc
Confidence            3322  2479999999995

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.21  E-value=1.1e-06  Score=77.62  Aligned_cols=66  Identities=23%  Similarity=0.149  Sum_probs=51.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      ++++|||||+|.||.++++.|++.|++|++++|+....                    .    .+.+|+.+..       
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------------~----~v~~d~~~~~-------  195 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------------G----KRFWDPLNPA-------  195 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------------T----CEECCTTSCC-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------------c----ceeecccchh-------
Confidence            56899999999999999999999999999999987631                    0    1456765421       


Q ss_pred             HHHhhccceeEEEechhhH
Q psy7936          94 DINQTEANVHILINNAVYC  112 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~  112 (222)
                        .+....+|+|||+||..
T Consensus       196 --~~~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          196 --SDLLDGADVLVHLAGEP  212 (516)
T ss_dssp             --TTTTTTCSEEEECCCC-
T ss_pred             --HHhcCCCCEEEECCCCc
Confidence              23335789999999864

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.21  E-value=9.7e-06  Score=67.12  Aligned_cols=83  Identities=23%  Similarity=0.282  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC---hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD---VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+   .++.+++.+.+....         +..+..  .++.+.
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~---------~~~v~~--~~~~~l  211 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT---------DCVVTV--TDLADQ  211 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS---------SCEEEE--EETTCH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc---------CcceEE--echHhh
Confidence            4678999999998 8999999999999998 89999999   888888888876642         333333  344443


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhh
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      ....+.+       ...|++||+...
T Consensus       212 ~~~~~~l-------~~~DiIINaTp~  230 (312)
T 3t4e_A          212 HAFTEAL-------ASADILTNGTKV  230 (312)
T ss_dssp             HHHHHHH-------HHCSEEEECSST
T ss_pred             hhhHhhc-------cCceEEEECCcC
Confidence            2222221       246999998653

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.19  E-value=5.6e-06  Score=69.63  Aligned_cols=81  Identities=16%  Similarity=0.258  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+|+++|||..+++.+...|++|+++++++++.+.+ +.+             +...   .+|..+.+..+.+.
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-------------ga~~---~~d~~~~~~~~~~~  232 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN-------------GAHE---VFNHREVNYIDKIK  232 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-------------TCSE---EEETTSTTHHHHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc-------------CCCE---EEeCCCchHHHHHH
Confidence            578999999999999999999999999999999998876633 221             2221   23555543333332


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +.. . ...+|++|+|+|..
T Consensus       233 ~~~-~-~~~~D~vi~~~G~~  250 (351)
T 1yb5_A          233 KYV-G-EKGIDIIIEMLANV  250 (351)
T ss_dssp             HHH-C-TTCEEEEEESCHHH
T ss_pred             HHc-C-CCCcEEEEECCChH
Confidence            221 1 23799999999953

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.19  E-value=5.6e-06  Score=70.18  Aligned_cols=79  Identities=19%  Similarity=0.223  Sum_probs=59.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+.+++++|+|+ |+||+.+++.+...|++|++++|+.++++.+.+.+             +..   +.+|.++..++.+
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-------------g~~---~~~~~~~~~~l~~  225 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-------------GGR---VITLTATEANIKK  225 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-------------TTS---EEEEECCHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-------------Cce---EEEecCCHHHHHH
Confidence            478899999999 99999999999999999999999998776554322             222   3456677666665


Q ss_pred             HHHHHHhhccceeEEEechhhHH
Q psy7936          91 CAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++.       ..|++|++++...
T Consensus       226 ~~~-------~~DvVi~~~g~~~  241 (369)
T 2eez_A          226 SVQ-------HADLLIGAVLVPG  241 (369)
T ss_dssp             HHH-------HCSEEEECCC---
T ss_pred             HHh-------CCCEEEECCCCCc
Confidence            543       5799999998654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.07  E-value=3.4e-05  Score=64.87  Aligned_cols=157  Identities=9%  Similarity=0.007  Sum_probs=83.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC-EEEEEeC--ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCC----------
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA-KVIMACR--DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDL----------   82 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~----------   82 (222)
                      +++||||+|+||.+++++|++.|+ +|+.++|  +.+.+.++.+.               .++++..+-.          
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~~---------------~d~Vih~a~~~~~~~~~~~~   66 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLK---------------ADFIVHLAGVNRPEHDKEFS   66 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHHH---------------CSEEEECCCSBCTTCSTTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhcc---------------CCEEEECCcCCCCCCHHHHH
Confidence            699999999999999999999999 9999999  33444444331               1233332211          


Q ss_pred             -CChhhHHHHHHHHHhhccceeEEEec-hhhHHhhhHHHHHHHHHhhc----C-CCCeEEEEEeCCcccCCcCCCCCCCC
Q psy7936          83 -ASFKSIRDCAQDINQTEANVHILINN-AVYCILSNNILFYSILFYAI----P-GKNVNVYAVHPGIVKTELGRYMDDTY  155 (222)
Q Consensus        83 -~~~~~v~~~~~~i~~~~~~id~li~~-ag~~~l~~~~~~~~~la~~~----~-~~gI~v~~v~PG~v~T~~~~~~~~~~  155 (222)
                       .+.....++++.+.+...+..++..+ .+... .+.+..+|..+.++    . +.|+++..+-|+.+-.+....... .
T Consensus        67 ~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~-~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~-~  144 (369)
T 3st7_A           67 LGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ-DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYN-S  144 (369)
T ss_dssp             SSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSS-C
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcc-h
Confidence             12334556666665432221233222 22222 23333333332221    1 247899999999875543321100 0


Q ss_pred             Ccchh----hhHH------HHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         156 FPGAR----TLGR------VLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       156 ~~~~~----~~~~------~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                      +....    ....      +-....+..++|+|+.++.++..+.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  188 (369)
T 3st7_A          145 VIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP  188 (369)
T ss_dssp             HHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCc
Confidence            00000    0000      0000114568999999999986653

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.05  E-value=1.5e-05  Score=66.80  Aligned_cols=81  Identities=17%  Similarity=0.286  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|++++|+|+++|||..+++.+... |++|+++++++++.+.+. .+             +....   +|..+.+.... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~-------------g~~~~---~~~~~~~~~~~-  231 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-------------GADYV---INASMQDPLAE-  231 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-------------TCSEE---EETTTSCHHHH-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-------------CCCEE---ecCCCccHHHH-
Confidence            5789999999999999999999988 999999999988765542 22             21222   24444333222 


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++... +.+|++|+|+|..
T Consensus       232 ~~~~~~~-~~~d~vi~~~g~~  251 (347)
T 1jvb_A          232 IRRITES-KGVDAVIDLNNSE  251 (347)
T ss_dssp             HHHHTTT-SCEEEEEESCCCH
T ss_pred             HHHHhcC-CCceEEEECCCCH
Confidence            2222221 4899999999954

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.01  E-value=3.4e-05  Score=64.75  Aligned_cols=80  Identities=20%  Similarity=0.292  Sum_probs=57.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+||+++||..+++.+...|++|+++++++++.+.+.+ +             +....   .|..+.+ ..+.+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-------------Ga~~~---~~~~~~~-~~~~~  228 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L-------------GAKRG---INYRSED-FAAVI  228 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-------------TCSEE---EETTTSC-HHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-------------CCCEE---EeCCchH-HHHHH
Confidence            57899999999999999999999999999999999988765542 2             22211   2444433 33333


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      .+..  ...+|++|+|+|..
T Consensus       229 ~~~~--~~g~Dvvid~~g~~  246 (353)
T 4dup_A          229 KAET--GQGVDIILDMIGAA  246 (353)
T ss_dssp             HHHH--SSCEEEEEESCCGG
T ss_pred             HHHh--CCCceEEEECCCHH
Confidence            3332  45799999999964

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.96  E-value=4.4e-05  Score=63.74  Aligned_cols=79  Identities=11%  Similarity=0.209  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+|+++|+|..+++.+...|++|+++++++++++.+. .+             +...   .+|.++. ++.+.+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-------------ga~~---~~d~~~~-~~~~~~  227 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-------------GADE---TVNYTHP-DWPKEV  227 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-------------TCSE---EEETTST-THHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-------------CCCE---EEcCCcc-cHHHHH
Confidence            5789999999999999999999999999999999988776553 22             1121   1366554 333323


Q ss_pred             HHHHhhccceeEEEechh
Q psy7936          93 QDINQTEANVHILINNAV  110 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag  110 (222)
                      .++.. ...+|++|+++|
T Consensus       228 ~~~~~-~~~~d~vi~~~g  244 (343)
T 2eih_A          228 RRLTG-GKGADKVVDHTG  244 (343)
T ss_dssp             HHHTT-TTCEEEEEESSC
T ss_pred             HHHhC-CCCceEEEECCC
Confidence            32221 237999999999

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.88  E-value=3.3e-05  Score=66.91  Aligned_cols=85  Identities=16%  Similarity=0.276  Sum_probs=59.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEE--ecCCC-------
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIK--KLDLA-------   83 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~D~~-------   83 (222)
                      .|++++|+||+|+||..+++.+...|++|+++++++++++.+. .+             +....+-  ..|+.       
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~l-------------Ga~~~i~~~~~~~~~~~~~~~  285 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-AL-------------GCDLVINRAELGITDDIADDP  285 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-------------TCCCEEEHHHHTCCTTGGGCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-------------CCCEEEecccccccccccccc
Confidence            6789999999999999999988889999999999888776542 22             2222221  12321       


Q ss_pred             --ChhhHHHHHHHHHhhcc-ceeEEEechhh
Q psy7936          84 --SFKSIRDCAQDINQTEA-NVHILINNAVY  111 (222)
Q Consensus        84 --~~~~v~~~~~~i~~~~~-~id~li~~ag~  111 (222)
                        +..++..+.+.+.+..+ .+|++|+++|.
T Consensus       286 ~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          286 RRVVETGRKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             cccchhhhHHHHHHHHHhCCCceEEEECCCc
Confidence              12344455555555443 69999999996

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.87  E-value=4.2e-05  Score=63.62  Aligned_cols=80  Identities=20%  Similarity=0.247  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+||+++||..+++.+...|++|+++++++++++.+. .+             +....   .|..+.+.... +
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-------------ga~~~---~~~~~~~~~~~-~  209 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EY-------------GAEYL---INASKEDILRQ-V  209 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-------------TCSEE---EETTTSCHHHH-H
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-------------CCcEE---EeCCCchHHHH-H
Confidence            5789999999999999999999999999999999988776332 22             22222   24444332222 2


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .+... ...+|++|+|+|.
T Consensus       210 ~~~~~-~~g~D~vid~~g~  227 (334)
T 3qwb_A          210 LKFTN-GKGVDASFDSVGK  227 (334)
T ss_dssp             HHHTT-TSCEEEEEECCGG
T ss_pred             HHHhC-CCCceEEEECCCh
Confidence            22211 2369999999996

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.86  E-value=7.1e-05  Score=55.06  Aligned_cols=93  Identities=9%  Similarity=0.009  Sum_probs=63.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC-hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .++.++|.|+ |.+|..+++.|.+.|++|++++++ .+..+.+.+..             ...+.++..|.++.+.+++.
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-------------~~~~~~i~gd~~~~~~l~~a   67 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-------------GDNADVIPGDSNDSSVLKKA   67 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-------------CTTCEEEESCTTSHHHHHHH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-------------cCCCeEEEcCCCCHHHHHHc
Confidence            4567889986 999999999999999999999998 45554444322             12356788999988766543


Q ss_pred             HHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhc
Q psy7936          92 AQDINQTEANVHILINNAVYCILSNNILFYSILFYAI  128 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~  128 (222)
                        .    ....|.+|.+.+....   ...+-.+++++
T Consensus        68 --~----i~~ad~vi~~~~~d~~---n~~~~~~a~~~   95 (153)
T 1id1_A           68 --G----IDRCRAILALSDNDAD---NAFVVLSAKDM   95 (153)
T ss_dssp             --T----TTTCSEEEECSSCHHH---HHHHHHHHHHH
T ss_pred             --C----hhhCCEEEEecCChHH---HHHHHHHHHHH
Confidence              1    1356888888764432   33334445555

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.84  E-value=4.7e-05  Score=63.10  Aligned_cols=80  Identities=15%  Similarity=0.249  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+||++++|..+++.+...|++|+++++++++++.+. .+             +....   .|.++.+....+ 
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-------------Ga~~~---~~~~~~~~~~~~-  201 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-------------GAWET---IDYSHEDVAKRV-  201 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-------------TCSEE---EETTTSCHHHHH-
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-------------CCCEE---EeCCCccHHHHH-
Confidence            5789999999999999999998889999999999998776543 22             22211   244443323322 


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .+... ...+|++|+|+|.
T Consensus       202 ~~~~~-~~g~Dvvid~~g~  219 (325)
T 3jyn_A          202 LELTD-GKKCPVVYDGVGQ  219 (325)
T ss_dssp             HHHTT-TCCEEEEEESSCG
T ss_pred             HHHhC-CCCceEEEECCCh
Confidence            22211 1379999999996

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.83  E-value=0.00035  Score=49.91  Aligned_cols=93  Identities=19%  Similarity=0.234  Sum_probs=61.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++|+++..+.+.+.             .  .+.++..|..+.+.+.+.  
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-------------~--~~~~~~~d~~~~~~l~~~--   65 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-------------I--DALVINGDCTKIKTLEDA--   65 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------------C--SSEEEESCTTSHHHHHHT--
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh-------------c--CcEEEEcCCCCHHHHHHc--
Confidence            357889987 9999999999999999999999998876554321             1  233567788776554321  


Q ss_pred             HHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCC
Q psy7936          94 DINQTEANVHILINNAVYCILSNNILFYSILFYAIPGK  131 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~  131 (222)
                          .....|++|.+.+....   ...+..++..+...
T Consensus        66 ----~~~~~d~vi~~~~~~~~---~~~~~~~~~~~~~~   96 (140)
T 1lss_A           66 ----GIEDADMYIAVTGKEEV---NLMSSLLAKSYGIN   96 (140)
T ss_dssp             ----TTTTCSEEEECCSCHHH---HHHHHHHHHHTTCC
T ss_pred             ----CcccCCEEEEeeCCchH---HHHHHHHHHHcCCC
Confidence                12467999999775432   22333345555543

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.82  E-value=0.00011  Score=61.26  Aligned_cols=80  Identities=24%  Similarity=0.370  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+||+|+||..+++.+...|++|++++++.++.+.+.+ +             +.... +  |..  .++.+.+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~-------------ga~~v-~--~~~--~~~~~~v  219 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V-------------GADIV-L--PLE--EGWAKAV  219 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-------------TCSEE-E--ESS--TTHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-------------CCcEE-e--cCc--hhHHHHH
Confidence            57899999999999999999999999999999999987754432 2             11211 1  333  2333333


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      .++.. ...+|++|+|+|..
T Consensus       220 ~~~~~-~~g~Dvvid~~g~~  238 (342)
T 4eye_A          220 REATG-GAGVDMVVDPIGGP  238 (342)
T ss_dssp             HHHTT-TSCEEEEEESCC--
T ss_pred             HHHhC-CCCceEEEECCchh
Confidence            33221 12699999999964

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=97.82  E-value=0.00014  Score=59.13  Aligned_cols=34  Identities=26%  Similarity=0.339  Sum_probs=31.9

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      ++|||||||.||..+++.|.++|++|+++.|++.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~   35 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG   35 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            4899999999999999999999999999999764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.80  E-value=5.9e-05  Score=61.98  Aligned_cols=47  Identities=36%  Similarity=0.445  Sum_probs=42.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEI   58 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i   58 (222)
                      ++.+++++|+|+ ||+|++++..|.+.|+ +|++++|+.++.+++.+.+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~  185 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG  185 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            578999999998 7999999999999998 9999999999888777654

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.78  E-value=6.1e-05  Score=62.83  Aligned_cols=82  Identities=12%  Similarity=0.215  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+|+++++|..+++.+...|++|+++++++++.+.+.+ +             +....   .|..+.+ +.+.+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-------------ga~~~---~~~~~~~-~~~~~  205 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-------------GAAYV---IDTSTAP-LYETV  205 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-------------TCSEE---EETTTSC-HHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-------------CCcEE---EeCCccc-HHHHH
Confidence            57899999999999999998888889999999999987765543 2             22222   2444432 22222


Q ss_pred             HHHHhhccceeEEEechhhHH
Q psy7936          93 QDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~  113 (222)
                      .+... ...+|++|+|+|...
T Consensus       206 ~~~~~-~~g~Dvvid~~g~~~  225 (340)
T 3gms_A          206 MELTN-GIGADAAIDSIGGPD  225 (340)
T ss_dssp             HHHTT-TSCEEEEEESSCHHH
T ss_pred             HHHhC-CCCCcEEEECCCChh
Confidence            22221 237999999999654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.78  E-value=0.00014  Score=63.17  Aligned_cols=85  Identities=21%  Similarity=0.301  Sum_probs=60.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEE--ecC--------C
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIK--KLD--------L   82 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~D--------~   82 (222)
                      .|.+++|+||+|++|...++.+...|++|+++++++++++.+. .+             +....+-  ..|        .
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-~l-------------Ga~~vi~~~~~d~~~~~~~~~  293 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AM-------------GAEAIIDRNAEGYRFWKDENT  293 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-------------TCCEEEETTTTTCCSEEETTE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-hh-------------CCcEEEecCcCcccccccccc
Confidence            5789999999999999999888889999999999888766543 33             1121111  112        2


Q ss_pred             CChhhHHHHHHHHHhhc--cceeEEEechhh
Q psy7936          83 ASFKSIRDCAQDINQTE--ANVHILINNAVY  111 (222)
Q Consensus        83 ~~~~~v~~~~~~i~~~~--~~id~li~~ag~  111 (222)
                      .+..+++++.+.+.+..  ..+|++|.++|.
T Consensus       294 ~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          294 QDPKEWKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             ECHHHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             cchHHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            44556666667766654  379999999996

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.73  E-value=0.00011  Score=61.93  Aligned_cols=47  Identities=23%  Similarity=0.292  Sum_probs=41.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      .+.+++++|+|+ ||+|+++++.+...|++|++++|+.++++.+.+..
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~  210 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF  210 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhh
Confidence            366789999999 99999999999999999999999999887765443

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.72  E-value=8.1e-05  Score=62.81  Aligned_cols=78  Identities=19%  Similarity=0.290  Sum_probs=56.6

Q ss_pred             CCCCCC--EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          10 SRLDGK--TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        10 ~~~~~k--~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .+++|+  +++|.|| |++|+.+++.|.+ .++|.+.+++.++++++.+                 .+..+++|+.|.++
T Consensus        10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-----------------~~~~~~~d~~d~~~   70 (365)
T 3abi_A           10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-----------------FATPLKVDASNFDK   70 (365)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-----------------TSEEEECCTTCHHH
T ss_pred             ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-----------------cCCcEEEecCCHHH
Confidence            334454  5889998 9999999999976 4799999999887765421                 23457889999888


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.++++       ..|++|++++...
T Consensus        71 l~~~~~-------~~DvVi~~~p~~~   89 (365)
T 3abi_A           71 LVEVMK-------EFELVIGALPGFL   89 (365)
T ss_dssp             HHHHHT-------TCSEEEECCCGGG
T ss_pred             HHHHHh-------CCCEEEEecCCcc
Confidence            877654       3599999987653

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.69  E-value=7.5e-05  Score=62.95  Aligned_cols=76  Identities=20%  Similarity=0.220  Sum_probs=52.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh---hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV---EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ++|++++|+|+ |++|..+++.+...|++|++++++.   ++.+.+ +.+             +..  .+  | .+  ++
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~-------------ga~--~v--~-~~--~~  236 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET-------------KTN--YY--N-SS--NG  236 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH-------------TCE--EE--E-CT--TC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh-------------CCc--ee--c-hH--HH
Confidence            45899999999 9999999998888999999999988   665332 222             222  22  4 33  22


Q ss_pred             HHHHHHHHhhccceeEEEechhhH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+.+.+ ..  +.+|++|+++|..
T Consensus       237 ~~~~~~-~~--~~~d~vid~~g~~  257 (366)
T 2cdc_A          237 YDKLKD-SV--GKFDVIIDATGAD  257 (366)
T ss_dssp             SHHHHH-HH--CCEEEEEECCCCC
T ss_pred             HHHHHH-hC--CCCCEEEECCCCh
Confidence            222222 22  5799999999864

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.69  E-value=9.3e-05  Score=59.24  Aligned_cols=85  Identities=16%  Similarity=0.192  Sum_probs=63.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      +.+++++|.|+ ||+|..+++.|+..|. ++++++++.                   .+.+.+.+.+....        |
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n--------p   99 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN--------P   99 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC--------T
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC--------C
Confidence            45688999996 6899999999999997 999999987                   67788888887754        4


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ..++..+..++.. +.+.+++       ...|++|.+.....
T Consensus       100 ~~~v~~~~~~~~~-~~~~~~~-------~~~DvVi~~~d~~~  133 (249)
T 1jw9_B          100 HIAITPVNALLDD-AELAALI-------AEHDLVLDCTDNVA  133 (249)
T ss_dssp             TSEEEEECSCCCH-HHHHHHH-------HTSSEEEECCSSHH
T ss_pred             CcEEEEEeccCCH-hHHHHHH-------hCCCEEEEeCCCHH
Confidence            5577777777763 3333332       35699999876443

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.68  E-value=7.1e-05  Score=60.66  Aligned_cols=49  Identities=20%  Similarity=0.243  Sum_probs=44.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR   59 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~   59 (222)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+.
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~  163 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ  163 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcc
Confidence            3568899999998 799999999999999999999999999888877764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.66  E-value=0.00018  Score=60.52  Aligned_cols=79  Identities=18%  Similarity=0.233  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+||++++|..+++.+...|++|+++++++++.+.+.+ +             +....   .|..+. ++.+.+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~-------------Ga~~~---~~~~~~-~~~~~~  224 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L-------------GCDRP---INYKTE-PVGTVL  224 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T-------------TCSEE---EETTTS-CHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c-------------CCcEE---EecCCh-hHHHHH
Confidence            57899999999999999999998999999999999887655432 1             22221   233332 333333


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .+..  ...+|++|+|+|.
T Consensus       225 ~~~~--~~g~D~vid~~g~  241 (362)
T 2c0c_A          225 KQEY--PEGVDVVYESVGG  241 (362)
T ss_dssp             HHHC--TTCEEEEEECSCT
T ss_pred             HHhc--CCCCCEEEECCCH
Confidence            3322  2479999999995

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.64  E-value=0.00011  Score=62.48  Aligned_cols=80  Identities=16%  Similarity=0.260  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+.+++++|+|+ |+||+.+++.+...|++|++++|+.++++.+.+.+             +..+   .++..+..++.
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-------------g~~~---~~~~~~~~~l~  226 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-------------CGRI---HTRYSSAYELE  226 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-------------TTSS---EEEECCHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-------------CCee---EeccCCHHHHH
Confidence            3578999999998 99999999999999999999999998776654332             1121   12333444444


Q ss_pred             HHHHHHHhhccceeEEEechhhHH
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +++.       ..|++|++++...
T Consensus       227 ~~l~-------~aDvVi~~~~~p~  243 (377)
T 2vhw_A          227 GAVK-------RADLVIGAVLVPG  243 (377)
T ss_dssp             HHHH-------HCSEEEECCCCTT
T ss_pred             HHHc-------CCCEEEECCCcCC
Confidence            4332       5699999887543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.63  E-value=0.00024  Score=59.37  Aligned_cols=81  Identities=12%  Similarity=0.159  Sum_probs=55.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +++++|+||++++|..+++.+...|++|+++++++++.+.+. .+             +....   .|..+. ++.+.+.
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-------------Ga~~~---~~~~~~-~~~~~v~  226 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-------------GAAHV---LNEKAP-DFEATLR  226 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-------------TCSEE---EETTST-THHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-------------CCCEE---EECCcH-HHHHHHH
Confidence            379999999999999999888888999999999998876553 22             22222   233332 3333333


Q ss_pred             HHHhhccceeEEEechhhHH
Q psy7936          94 DINQTEANVHILINNAVYCI  113 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~  113 (222)
                      ++... ..+|++|+++|...
T Consensus       227 ~~~~~-~g~D~vid~~g~~~  245 (349)
T 3pi7_A          227 EVMKA-EQPRIFLDAVTGPL  245 (349)
T ss_dssp             HHHHH-HCCCEEEESSCHHH
T ss_pred             HHhcC-CCCcEEEECCCChh
Confidence            32221 36999999999653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=97.63  E-value=2.7e-05  Score=64.78  Aligned_cols=79  Identities=10%  Similarity=-0.034  Sum_probs=52.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC-------EEEEEeCCh--hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA-------KVIMACRDV--EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      .+++||||+|.||..++..|++.|.       .|++++++.  +..+.....+...          ...  ++ .|+.+.
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~----------~~~--~~-~di~~~   71 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC----------AFP--LL-AGLEAT   71 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT----------TCT--TE-EEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc----------ccc--cc-CCeEec
Confidence            3699999999999999999999886       899999875  3333322333221          111  12 466655


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .++.+.+       ...|++||.||...
T Consensus        72 ~~~~~a~-------~~~D~Vih~Ag~~~   92 (327)
T 1y7t_A           72 DDPKVAF-------KDADYALLVGAAPR   92 (327)
T ss_dssp             SCHHHHT-------TTCSEEEECCCCCC
T ss_pred             cChHHHh-------CCCCEEEECCCcCC
Confidence            5544433       25799999999764

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.62  E-value=0.00014  Score=58.98  Aligned_cols=48  Identities=23%  Similarity=0.387  Sum_probs=43.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEI   58 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i   58 (222)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~  164 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNEL  164 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHH
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh
Confidence            4578999999998 7999999999999996 9999999999988888765

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.61  E-value=0.00015  Score=59.05  Aligned_cols=50  Identities=22%  Similarity=0.330  Sum_probs=44.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+..
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~  172 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA  172 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc
Confidence            4578999999998 7999999999999997 999999999999888887754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.58  E-value=0.00042  Score=57.66  Aligned_cols=78  Identities=23%  Similarity=0.255  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+|+ +|+|..+++.+...|++|+++++++++.+.+. .+             +...   .+|.++. ++.+.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-------------Ga~~---~~d~~~~-~~~~~~  224 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL-------------GADL---VVNPLKE-DAAKFM  224 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT-------------TCSE---EECTTTS-CHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC-------------CCCE---EecCCCc-cHHHHH
Confidence            5789999999 88999999998889999999999988776443 11             2221   1365543 333333


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      .++.   +.+|++|+++|..
T Consensus       225 ~~~~---~~~d~vid~~g~~  241 (339)
T 1rjw_A          225 KEKV---GGVHAAVVTAVSK  241 (339)
T ss_dssp             HHHH---SSEEEEEESSCCH
T ss_pred             HHHh---CCCCEEEECCCCH
Confidence            3332   5799999999853

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.56  E-value=0.00046  Score=57.61  Aligned_cols=79  Identities=20%  Similarity=0.251  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+||++++|...++.+...|++|+++++++++.+.+.+ +             +....   .|..+  ++.+.+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-------------Ga~~v---i~~~~--~~~~~~  210 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-------------GADIV---LNHKE--SLLNQF  210 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-------------TCSEE---ECTTS--CHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-------------CCcEE---EECCc--cHHHHH
Confidence            58899999999999999999888899999999999887665443 2             11211   13222  233333


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      .+.  ....+|++|+++|..
T Consensus       211 ~~~--~~~g~Dvv~d~~g~~  228 (346)
T 3fbg_A          211 KTQ--GIELVDYVFCTFNTD  228 (346)
T ss_dssp             HHH--TCCCEEEEEESSCHH
T ss_pred             HHh--CCCCccEEEECCCch
Confidence            332  224799999999854

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.55  E-value=0.00061  Score=55.71  Aligned_cols=94  Identities=17%  Similarity=0.254  Sum_probs=70.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh------------------hHHHHHHHHHHHhhhhhcccCCC
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV------------------EKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      .+.+++++|.|+ ||+|..+++.|+..|. ++.++|.+.                  .+.+.+.+.++..+        |
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iN--------P  103 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNIN--------P  103 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHC--------T
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhC--------C
Confidence            456788999987 6799999999999997 999998754                  45666677777664        6


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhh----ccceeEEEechhhHH
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQT----EANVHILINNAVYCI  113 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~----~~~id~li~~ag~~~  113 (222)
                      ..++..+..++++.+.+..+++.+...    ....|++|.+.....
T Consensus       104 ~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~  149 (292)
T 3h8v_A          104 DVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFE  149 (292)
T ss_dssp             TSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHH
T ss_pred             CcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchh
Confidence            778888888898777777766544221    136899998865443

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.51  E-value=0.0012  Score=53.55  Aligned_cols=43  Identities=14%  Similarity=0.078  Sum_probs=37.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      +++.|.|+ |.+|..+|..|++.|++|++++|+++.+++..+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            46777776 77999999999999999999999999888777664

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.51  E-value=0.00051  Score=57.27  Aligned_cols=77  Identities=25%  Similarity=0.356  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|+++||+||+|++|..+++.+...|++|+++ +++++++.+ +.+             +...    +| .+ .++.+.+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-------------Ga~~----i~-~~-~~~~~~~  208 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-------------GATP----ID-AS-REPEDYA  208 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-------------TSEE----EE-TT-SCHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-------------CCCE----ec-cC-CCHHHHH
Confidence            57899999999999999999998999999998 777765433 222             2232    34 22 3333333


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .+... ...+|++|+++|.
T Consensus       209 ~~~~~-~~g~D~vid~~g~  226 (343)
T 3gaz_A          209 AEHTA-GQGFDLVYDTLGG  226 (343)
T ss_dssp             HHHHT-TSCEEEEEESSCT
T ss_pred             HHHhc-CCCceEEEECCCc
Confidence            33322 2379999999995

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.48  E-value=0.00022  Score=62.23  Aligned_cols=45  Identities=29%  Similarity=0.366  Sum_probs=39.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      ..+.||+++|||++ +||+++|+.|...|++|+++++++....+..
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            35789999999987 9999999999999999999999987665544

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.44  E-value=0.00024  Score=52.34  Aligned_cols=80  Identities=16%  Similarity=0.237  Sum_probs=56.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ..++.++|.|+ |.+|..+++.|.+.|++|++++|+++..+.+.+   .          .  ....+..|..+.+.+.+.
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----------~--g~~~~~~d~~~~~~l~~~   80 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----------F--SGFTVVGDAAEFETLKEC   80 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----------C--CSEEEESCTTSHHHHHTT
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----------C--CCcEEEecCCCHHHHHHc
Confidence            46778999996 999999999999999999999999876543210   0          1  233556787765433321


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                            .....|++|.+.+...
T Consensus        81 ------~~~~ad~Vi~~~~~~~   96 (155)
T 2g1u_A           81 ------GMEKADMVFAFTNDDS   96 (155)
T ss_dssp             ------TGGGCSEEEECSSCHH
T ss_pred             ------CcccCCEEEEEeCCcH
Confidence                  1236799999987544

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.44  E-value=0.00015  Score=52.80  Aligned_cols=44  Identities=18%  Similarity=0.238  Sum_probs=39.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      +++++|.|+ |++|..+++.|...|++|++++|+.++.+++.+.+
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            789999996 99999999999999999999999999887766554

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.43  E-value=0.00087  Score=48.41  Aligned_cols=100  Identities=9%  Similarity=0.005  Sum_probs=66.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      +.++|.|+ |.+|..+++.|.+.|+.|++++++++..+++.+    .            .+.++..|.++.+.++++   
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~------------g~~~i~gd~~~~~~l~~a---   67 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R------------GVRAVLGNAANEEIMQLA---   67 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T------------TCEEEESCTTSHHHHHHT---
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c------------CCCEEECCCCCHHHHHhc---
Confidence            35778887 779999999999999999999999988766542    1            334678999998766543   


Q ss_pred             HHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeCC
Q psy7936          95 INQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPG  141 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~PG  141 (222)
                         .....|.+|.+.+.....  ...+. .++++.+ ++++.+....
T Consensus        68 ---~i~~ad~vi~~~~~~~~n--~~~~~-~a~~~~~-~~~iiar~~~  107 (140)
T 3fwz_A           68 ---HLECAKWLILTIPNGYEA--GEIVA-SARAKNP-DIEIIARAHY  107 (140)
T ss_dssp             ---TGGGCSEEEECCSCHHHH--HHHHH-HHHHHCS-SSEEEEEESS
T ss_pred             ---CcccCCEEEEECCChHHH--HHHHH-HHHHHCC-CCeEEEEECC
Confidence               113578888886654322  11222 3344432 3566665443

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.41  E-value=0.00038  Score=56.95  Aligned_cols=42  Identities=21%  Similarity=0.384  Sum_probs=37.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .|++++|+|++|++|..+++.+...|++|+++++++++.+.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999999999999998888999999999998876544

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.39  E-value=0.00041  Score=57.20  Aligned_cols=98  Identities=15%  Similarity=0.177  Sum_probs=60.6

Q ss_pred             CCCCE-EEEecCCC-----------------c-hHHHHHHHHHhCCCEEEEEeCChhHHHHHH------HHHHHhhhhhc
Q psy7936          12 LDGKT-VIITGCNT-----------------G-IGKVTAQTLYGIGAKVIMACRDVEKAETTA------SEIRKHFEVAT   66 (222)
Q Consensus        12 ~~~k~-~lVtGas~-----------------g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~------~~i~~~~~~~~   66 (222)
                      +.||. +|||+|..                 | +|.++|+.+++.|+.|+++.+... +....      ..+. ..+  .
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~~~~~~-~~~--~  109 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPPQTWLS-ALR--P  109 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCHHHHHH-HCE--E
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCccchhh-hhc--c
Confidence            56777 99998765                 6 999999999999999999887432 11000      0011 000  0


Q ss_pred             ccCCCCCeEEEEecCCCChhhHHHHHHHH------------------------------HhhccceeEEEechhhHHh
Q psy7936          67 SEDKKPGEVLIKKLDLASFKSIRDCAQDI------------------------------NQTEANVHILINNAVYCIL  114 (222)
Q Consensus        67 ~~~~~~~~~~~~~~D~~~~~~v~~~~~~i------------------------------~~~~~~id~li~~ag~~~l  114 (222)
                      .+. .+..+..+..|+.+..++.+.+...                              .+.++..|++|.+|++...
T Consensus       110 ~~~-~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          110 SGP-ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             CCC--CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             ccc-cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence            000 1123445566676666666665433                              2345778999999998764

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.36  E-value=0.001  Score=53.25  Aligned_cols=84  Identities=18%  Similarity=0.288  Sum_probs=60.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      +.+++++|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.++...        |
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n--------p   96 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN--------P   96 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC--------T
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC--------C
Confidence            45788999998 6799999999999998 888886532                   56677777777654        5


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhH
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      ..++..+..++.. +.+..+++       ..|++|++....
T Consensus        97 ~~~v~~~~~~~~~-~~~~~~~~-------~~DvVi~~~d~~  129 (251)
T 1zud_1           97 DIQLTALQQRLTG-EALKDAVA-------RADVVLDCTDNM  129 (251)
T ss_dssp             TSEEEEECSCCCH-HHHHHHHH-------HCSEEEECCSSH
T ss_pred             CCEEEEEeccCCH-HHHHHHHh-------cCCEEEECCCCH
Confidence            5677777666654 33433332       469999886543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.27  E-value=0.00049  Score=57.95  Aligned_cols=76  Identities=18%  Similarity=0.284  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|+|+ +++|..+++.+...|++|+++++++++.+.+.+.+             +....   .|..+.+.+.   
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-------------Ga~~v---~~~~~~~~~~---  246 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-------------GADSF---LVSRDQEQMQ---  246 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-------------CCSEE---EETTCHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------------CCceE---EeccCHHHHH---
Confidence            6889999996 99999999988889999999999998776544222             22221   2444433222   


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                          +..+.+|++|+++|..
T Consensus       247 ----~~~~~~D~vid~~g~~  262 (366)
T 1yqd_A          247 ----AAAGTLDGIIDTVSAV  262 (366)
T ss_dssp             ----HTTTCEEEEEECCSSC
T ss_pred             ----HhhCCCCEEEECCCcH
Confidence                2224799999999864

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.26  E-value=0.002  Score=54.05  Aligned_cols=79  Identities=15%  Similarity=0.197  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|+| +|++|...++.+...|++|+++++++++.+.+. .+             +....   .| .+..++.+.+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-------------Ga~~v---i~-~~~~~~~~~v  249 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-AL-------------GADHG---IN-RLEEDWVERV  249 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HH-------------TCSEE---EE-TTTSCHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-Hc-------------CCCEE---Ec-CCcccHHHHH
Confidence            578999999 899999999888889999999999988776542 22             22222   23 3333444433


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .++.. ...+|++|.++|.
T Consensus       250 ~~~~~-g~g~D~vid~~g~  267 (363)
T 3uog_A          250 YALTG-DRGADHILEIAGG  267 (363)
T ss_dssp             HHHHT-TCCEEEEEEETTS
T ss_pred             HHHhC-CCCceEEEECCCh
Confidence            33322 1379999999993

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.23  E-value=0.00023  Score=53.80  Aligned_cols=79  Identities=14%  Similarity=0.027  Sum_probs=56.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++.++.++|.|+ |.+|..+++.|.+. |++|++++++++..+.+.    ..          +  +.++..|.++.+.+.
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~----------g--~~~~~gd~~~~~~l~   98 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SE----------G--RNVISGDATDPDFWE   98 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HT----------T--CCEEECCTTCHHHHH
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HC----------C--CCEEEcCCCCHHHHH
Confidence            355667888884 89999999999999 999999999998766543    11          2  235667888765443


Q ss_pred             HHHHHHHhhccceeEEEechhh
Q psy7936          90 DCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~  111 (222)
                      ++     ......|.+|.+.+.
T Consensus        99 ~~-----~~~~~ad~vi~~~~~  115 (183)
T 3c85_A           99 RI-----LDTGHVKLVLLAMPH  115 (183)
T ss_dssp             TB-----CSCCCCCEEEECCSS
T ss_pred             hc-----cCCCCCCEEEEeCCC
Confidence            21     012467999988764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.20  E-value=0.00085  Score=57.39  Aligned_cols=47  Identities=34%  Similarity=0.527  Sum_probs=41.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEI   58 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i   58 (222)
                      ++.|++++|.|+ |++|..+++.|...|+ +|++++|+.++.+++.+.+
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~  211 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL  211 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            468999999998 9999999999999998 9999999998876665544

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.15  E-value=0.0007  Score=52.65  Aligned_cols=75  Identities=19%  Similarity=0.159  Sum_probs=57.6

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      .++|.|+ |.+|..+++.|.+.|++|++++++++..+++.+..               .+.++..|.++.+.++++    
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~---------------~~~~i~gd~~~~~~l~~a----   61 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL---------------KATIIHGDGSHKEILRDA----   61 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS---------------SSEEEESCTTSHHHHHHH----
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc---------------CCeEEEcCCCCHHHHHhc----
Confidence            4889996 88999999999999999999999999876654321               345788999998776643    


Q ss_pred             HhhccceeEEEechhhH
Q psy7936          96 NQTEANVHILINNAVYC  112 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~  112 (222)
                        .....|++|.+.+..
T Consensus        62 --~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C           62 --EVSKNDVVVILTPRD   76 (218)
T ss_dssp             --TCCTTCEEEECCSCH
T ss_pred             --CcccCCEEEEecCCc
Confidence              123568888877644

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.14  E-value=0.00098  Score=56.21  Aligned_cols=77  Identities=19%  Similarity=0.370  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|++++|+||+|++|..+++.+...|++|++++ +.++.+.+ +.+             +....   .|..+.+ +   .
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l-------------Ga~~v---~~~~~~~-~---~  240 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL-------------GADDV---IDYKSGS-V---E  240 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT-------------TCSEE---EETTSSC-H---H
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc-------------CCCEE---EECCchH-H---H
Confidence            578999999999999999988888899999888 45554332 222             22222   2433322 2   2


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +.+.+ ...+|++|+++|..
T Consensus       241 ~~~~~-~~g~D~vid~~g~~  259 (375)
T 2vn8_A          241 EQLKS-LKPFDFILDNVGGS  259 (375)
T ss_dssp             HHHHT-SCCBSEEEESSCTT
T ss_pred             HHHhh-cCCCCEEEECCCCh
Confidence            22222 25799999999864

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.07  E-value=0.0024  Score=53.50  Aligned_cols=84  Identities=18%  Similarity=0.139  Sum_probs=56.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCE-EEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAK-VIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|+|+ |++|...++.....|++ |+++++++++.+.+.+ + ..            .+..+..|-.+.+++.+.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-~~------------~~~~~~~~~~~~~~~~~~  243 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-CP------------EVVTHKVERLSAEESAKK  243 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-CT------------TCEEEECCSCCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-ch------------hcccccccccchHHHHHH
Confidence            5789999998 99999988877788996 9999999987765443 3 21            223334454444454443


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++.. ...+|++|.++|..
T Consensus       244 v~~~t~-g~g~Dvvid~~g~~  263 (363)
T 3m6i_A          244 IVESFG-GIEPAVALECTGVE  263 (363)
T ss_dssp             HHHHTS-SCCCSEEEECSCCH
T ss_pred             HHHHhC-CCCCCEEEECCCCh
Confidence            333321 23799999999854

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.03  E-value=0.003  Score=52.63  Aligned_cols=79  Identities=19%  Similarity=0.256  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+. .+             +....   .|..+. ++.+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-------------Ga~~~---~~~~~~-~~~~~  227 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-------------GADYV---INPFEE-DVVKE  227 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-------------TCSEE---ECTTTS-CHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-------------CCCEE---ECCCCc-CHHHH
Confidence            6889999999 9999999998888999 9999999988765443 22             21211   244432 33332


Q ss_pred             HHHHHhhccceeEEEechhh
Q psy7936          92 AQDINQTEANVHILINNAVY  111 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~  111 (222)
                      +.++.. ...+|++|+++|.
T Consensus       228 v~~~~~-g~g~D~vid~~g~  246 (348)
T 2d8a_A          228 VMDITD-GNGVDVFLEFSGA  246 (348)
T ss_dssp             HHHHTT-TSCEEEEEECSCC
T ss_pred             HHHHcC-CCCCCEEEECCCC
Confidence            222211 1269999999985

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.03  E-value=0.0015  Score=53.18  Aligned_cols=45  Identities=18%  Similarity=0.245  Sum_probs=40.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTA   55 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~   55 (222)
                      .++++|+++|+|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4578999999997 6999999999999998 9999999998876664

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.99  E-value=0.0042  Score=51.79  Aligned_cols=93  Identities=15%  Similarity=0.169  Sum_probs=61.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      +.+++++|.|+ ||+|.++++.|+..|. ++.++++..                   .+.+.+.+.++..+        |
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~in--------P  102 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF--------P  102 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHC--------T
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhC--------C
Confidence            46788999987 5799999999999998 899987632                   45667777777765        5


Q ss_pred             CCeEEEEecCCC-------ChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          72 PGEVLIKKLDLA-------SFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        72 ~~~~~~~~~D~~-------~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ..++..+..++.       +....+.-.+.+.+.....|++|++.-...
T Consensus       103 ~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~  151 (340)
T 3rui_A          103 LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE  151 (340)
T ss_dssp             TCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG
T ss_pred             CCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH
Confidence            667777776652       111111011122223346799998865443

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.99  E-value=0.0028  Score=52.58  Aligned_cols=78  Identities=22%  Similarity=0.243  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|+|+ +++|...++.+...|++|+++++++++.+.+. .+             +....   .|..+.+-.+.+ 
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-------------Ga~~~---i~~~~~~~~~~~-  226 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RL-------------GAEVA---VNARDTDPAAWL-  226 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-------------TCSEE---EETTTSCHHHHH-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-Hc-------------CCCEE---EeCCCcCHHHHH-
Confidence            5789999997 89999998888888999999999998776432 22             22222   233333222222 


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                         .+..+.+|++|.++|..
T Consensus       227 ---~~~~g~~d~vid~~g~~  243 (340)
T 3s2e_A          227 ---QKEIGGAHGVLVTAVSP  243 (340)
T ss_dssp             ---HHHHSSEEEEEESSCCH
T ss_pred             ---HHhCCCCCEEEEeCCCH
Confidence               22335899999998744

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.98  E-value=0.00099  Score=55.02  Aligned_cols=39  Identities=21%  Similarity=0.342  Sum_probs=34.6

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      +++|+|++|++|...++.+...|++|+++++++++.+.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  190 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL  190 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            799999999999999988888999999999998776544

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.97  E-value=0.0037  Score=52.33  Aligned_cols=39  Identities=23%  Similarity=0.226  Sum_probs=32.8

Q ss_pred             CC-CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHH
Q psy7936          13 DG-KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA   51 (222)
Q Consensus        13 ~~-k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~   51 (222)
                      .| .+++|+||+|++|...++.....|+++++++++.+++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~  205 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL  205 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCcccc
Confidence            46 8999999999999988877777799999888776653

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.94  E-value=0.0017  Score=54.39  Aligned_cols=51  Identities=25%  Similarity=0.166  Sum_probs=43.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHh
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      -|+++++.|+|++|.+|..+|..++..|.  +|+++|+++++++....++...
T Consensus         5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~   57 (343)
T 3fi9_A            5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC   57 (343)
T ss_dssp             CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC
Confidence            35677899999999999999999999984  8999999998887776666653

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.94  E-value=0.0012  Score=54.86  Aligned_cols=77  Identities=17%  Similarity=0.311  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ + .             .   ...|..+ +++.+.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a-------------~---~v~~~~~-~~~~~~  223 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A-------------D---RLVNPLE-EDLLEV  223 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C-------------S---EEECTTT-SCHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H-------------H---hccCcCc-cCHHHH
Confidence            6889999999 9999999988888999 99999999876543321 1 1             1   1124433 234443


Q ss_pred             HHHHHhhccceeEEEechhh
Q psy7936          92 AQDINQTEANVHILINNAVY  111 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~  111 (222)
                      +.++.  ...+|++|.++|.
T Consensus       224 ~~~~~--~~g~D~vid~~g~  241 (343)
T 2dq4_A          224 VRRVT--GSGVEVLLEFSGN  241 (343)
T ss_dssp             HHHHH--SSCEEEEEECSCC
T ss_pred             HHHhc--CCCCCEEEECCCC
Confidence            44333  3479999999985

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.93  E-value=0.0021  Score=49.47  Aligned_cols=43  Identities=33%  Similarity=0.452  Sum_probs=37.8

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      +++|+||+|.+|..+++.|.+.|++|++++|+.++.+++.+.+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            5789999999999999999999999999999998877765543

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.92  E-value=0.0074  Score=50.26  Aligned_cols=41  Identities=29%  Similarity=0.401  Sum_probs=35.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .|.+++|+|+ +++|...++.+...|++|+++++++++.+.+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  208 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA  208 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            5789999997 8999999888878899999999998876544

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=96.92  E-value=0.00047  Score=57.39  Aligned_cols=79  Identities=8%  Similarity=-0.076  Sum_probs=53.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC-------EEEEEeCC----hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCC
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA-------KVIMACRD----VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLA   83 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~-------~v~~~~r~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~   83 (222)
                      .+++||||+|.+|..++..|+..|.       .|++++++    +++++.....+....          ..+   ..|+.
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~----------~~~---~~~i~   72 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA----------FPL---LAGMT   72 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT----------CTT---EEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc----------ccc---cCcEE
Confidence            4799999999999999999999885       79999998    655655455554320          011   12444


Q ss_pred             ChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          84 SFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        84 ~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ...+..+.+       ...|++|+.||...
T Consensus        73 ~~~~~~~al-------~~aD~Vi~~ag~~~   95 (329)
T 1b8p_A           73 AHADPMTAF-------KDADVALLVGARPR   95 (329)
T ss_dssp             EESSHHHHT-------TTCSEEEECCCCCC
T ss_pred             EecCcHHHh-------CCCCEEEEeCCCCC
Confidence            333444332       34699999998654

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.90  E-value=0.0046  Score=52.02  Aligned_cols=80  Identities=14%  Similarity=0.179  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC-hhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS-FKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~   90 (222)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+. .+             +....   .|..+ .+++.+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-------------Ga~~v---i~~~~~~~~~~~  253 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-------------GATDF---VNPNDHSEPISQ  253 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-------------TCCEE---ECGGGCSSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-------------CCceE---EeccccchhHHH
Confidence            5789999996 8999999888888899 8999999998776443 22             22211   24433 133444


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+.++..  +.+|++|+++|..
T Consensus       254 ~~~~~~~--~g~D~vid~~g~~  273 (374)
T 1cdo_A          254 VLSKMTN--GGVDFSLECVGNV  273 (374)
T ss_dssp             HHHHHHT--SCBSEEEECSCCH
T ss_pred             HHHHHhC--CCCCEEEECCCCH
Confidence            4444433  4799999999853

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.89  E-value=0.0016  Score=52.68  Aligned_cols=41  Identities=22%  Similarity=0.191  Sum_probs=38.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      +|+++|.|+ ||+|++++..|.+.|.+|+++.|+.++.+++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            789999997 89999999999999999999999999888776

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.89  E-value=0.0038  Score=52.42  Aligned_cols=79  Identities=15%  Similarity=0.191  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHh-CCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYG-IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|+||+|++|...++.+.. .|++|+++++++++.+.+.+ +             +....+   |-.+  ++.+.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-l-------------Gad~vi---~~~~--~~~~~  231 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-L-------------GAHHVI---DHSK--PLAAE  231 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-T-------------TCSEEE---CTTS--CHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-c-------------CCCEEE---eCCC--CHHHH
Confidence            578999999999999877665544 48899999999887655432 2             222222   3322  23332


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++  ..+.+|++|.++|..
T Consensus       232 v~~~--~~~g~Dvvid~~g~~  250 (363)
T 4dvj_A          232 VAAL--GLGAPAFVFSTTHTD  250 (363)
T ss_dssp             HHTT--CSCCEEEEEECSCHH
T ss_pred             HHHh--cCCCceEEEECCCch
Confidence            2222  224799999999854

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.83  E-value=0.005  Score=51.78  Aligned_cols=80  Identities=16%  Similarity=0.206  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC-hhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS-FKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~   90 (222)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. .+             +....   .|..+ .+++.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-------------Ga~~v---i~~~~~~~~~~~  252 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV-------------GATEC---VNPQDYKKPIQE  252 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-------------TCSEE---ECGGGCSSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-------------CCceE---ecccccchhHHH
Confidence            5789999995 8999999888888899 8999999988775442 22             22211   24433 133444


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+.++..  +.+|++|.++|..
T Consensus       253 ~~~~~~~--~g~D~vid~~g~~  272 (374)
T 2jhf_A          253 VLTEMSN--GGVDFSFEVIGRL  272 (374)
T ss_dssp             HHHHHTT--SCBSEEEECSCCH
T ss_pred             HHHHHhC--CCCcEEEECCCCH
Confidence            4444332  4799999999853

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.83  E-value=0.0099  Score=49.62  Aligned_cols=80  Identities=20%  Similarity=0.250  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCC--ChhhHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLA--SFKSIR   89 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~v~   89 (222)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. .+             +....   .|..  +..+..
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-------------Ga~~v---i~~~~~~~~~~~  232 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-------------GADLV---LQISKESPQEIA  232 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-------------TCSEE---EECSSCCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-------------CCCEE---EcCcccccchHH
Confidence            5789999996 8999998887777899 9999999988765432 22             22211   1333  222322


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.+.+...  ..+|++|.++|..
T Consensus       233 ~~i~~~~~--~g~D~vid~~g~~  253 (356)
T 1pl8_A          233 RKVEGQLG--CKPEVTIECTGAE  253 (356)
T ss_dssp             HHHHHHHT--SCCSEEEECSCCH
T ss_pred             HHHHHHhC--CCCCEEEECCCCh
Confidence            22222222  4799999999854

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.81  E-value=0.0061  Score=50.99  Aligned_cols=79  Identities=19%  Similarity=0.208  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|+|+ +++|...++..... |++|+++++++++.+.+. .+             +....   .|..+.  +.+.
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-------------Ga~~v---i~~~~~--~~~~  245 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-------------GADHV---VDARRD--PVKQ  245 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-------------TCSEE---EETTSC--HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-------------CCCEE---Eeccch--HHHH
Confidence            5789999999 89999888777777 999999999988765443 22             22222   243333  3333


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++.. ...+|++|.++|..
T Consensus       246 v~~~~~-g~g~Dvvid~~G~~  265 (359)
T 1h2b_A          246 VMELTR-GRGVNVAMDFVGSQ  265 (359)
T ss_dssp             HHHHTT-TCCEEEEEESSCCH
T ss_pred             HHHHhC-CCCCcEEEECCCCc
Confidence            333322 12699999999865

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.77  E-value=0.0059  Score=51.52  Aligned_cols=41  Identities=24%  Similarity=0.386  Sum_probs=35.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~   54 (222)
                      .|.+++|+| +|++|...++.+...| ++|+++++++++.+.+
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  236 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA  236 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH
Confidence            478999999 8999999988888889 5999999999876544

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.76  E-value=0.0057  Score=51.36  Aligned_cols=80  Identities=15%  Similarity=0.167  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC-hhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS-FKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~   90 (222)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+. .+             +....   .|..+ .+++.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-------------Ga~~v---i~~~~~~~~~~~  251 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-------------GATEC---INPQDFSKPIQE  251 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-------------TCSEE---ECGGGCSSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-------------CCceE---eccccccccHHH
Confidence            5789999996 8999998887777898 8999999988776543 22             22211   24333 133444


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+.++..  +.+|++|.++|..
T Consensus       252 ~v~~~~~--~g~D~vid~~g~~  271 (373)
T 2fzw_A          252 VLIEMTD--GGVDYSFECIGNV  271 (373)
T ss_dssp             HHHHHTT--SCBSEEEECSCCH
T ss_pred             HHHHHhC--CCCCEEEECCCcH
Confidence            4444332  4799999999853

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.76  E-value=0.0063  Score=51.04  Aligned_cols=82  Identities=24%  Similarity=0.362  Sum_probs=62.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      +.+++++|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+...+        |
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n--------p  186 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRN--------S  186 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC--------T
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHC--------C
Confidence            45678999988 7899999999999998 899998742                   35666777777764        6


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechh
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAV  110 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag  110 (222)
                      ..++..+..++....++.       + +...|++|.+..
T Consensus       187 ~v~v~~~~~~i~~~~~~~-------~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          187 EISVSEIALNINDYTDLH-------K-VPEADIWVVSAD  217 (353)
T ss_dssp             TSEEEEEECCCCSGGGGG-------G-SCCCSEEEECCC
T ss_pred             CCeEEEeecccCchhhhh-------H-hccCCEEEEecC
Confidence            678888888887654322       2 457899998764

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=96.75  E-value=0.017  Score=47.75  Aligned_cols=45  Identities=22%  Similarity=0.228  Sum_probs=37.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      +++.|.|| |-+|..||..++..|++|++.+.+++.+++..+.+++
T Consensus         7 ~~VaViGa-G~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~   51 (319)
T 3ado_A            7 GDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRK   51 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHH
Confidence            45677777 6799999999999999999999999887776666544

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.74  E-value=0.0072  Score=54.03  Aligned_cols=93  Identities=15%  Similarity=0.168  Sum_probs=62.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      +.+++++|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+++..        |
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN--------P  394 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF--------P  394 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC--------T
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC--------C
Confidence            56788999988 5799999999999998 999998743                   45677777777765        6


Q ss_pred             CCeEEEEecCC-------CChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          72 PGEVLIKKLDL-------ASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        72 ~~~~~~~~~D~-------~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ..++..+..++       .+.+..+.-.+.+.+.....|++|++.....
T Consensus       395 ~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~  443 (615)
T 4gsl_A          395 LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE  443 (615)
T ss_dssp             TCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGG
T ss_pred             CcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHH
Confidence            67777777665       2211111111222233346799999866444

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.74  E-value=0.00049  Score=55.92  Aligned_cols=44  Identities=23%  Similarity=0.340  Sum_probs=38.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETT   54 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   54 (222)
                      .++++|+++|+|+ ||+|++++..|.+.|+ +|++++|+.++.+++
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            3567899999997 7999999999999999 999999998865543

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=96.73  E-value=0.0042  Score=51.50  Aligned_cols=35  Identities=20%  Similarity=0.056  Sum_probs=31.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVE   49 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~   49 (222)
                      .+++||||+|.+|..++..|+..|  ..|++++++++
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            469999999999999999999998  68999998876

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.73  E-value=0.0068  Score=50.98  Aligned_cols=81  Identities=25%  Similarity=0.255  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|+|+ |++|...++.....|+ +|+++++++++.+.+ +.+             +....   .|.++. ++.+.
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-------------Ga~~v---i~~~~~-~~~~~  242 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV-------------GATAT---VDPSAG-DVVEA  242 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-------------TCSEE---ECTTSS-CHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-------------CCCEE---ECCCCc-CHHHH
Confidence            5789999998 8999998887778899 899999998876533 333             22211   244443 23332


Q ss_pred             HHHHHhh-ccceeEEEechhhH
Q psy7936          92 AQDINQT-EANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~-~~~id~li~~ag~~  112 (222)
                      +.+.... .+.+|++|.++|..
T Consensus       243 i~~~~~~~~gg~Dvvid~~G~~  264 (370)
T 4ej6_A          243 IAGPVGLVPGGVDVVIECAGVA  264 (370)
T ss_dssp             HHSTTSSSTTCEEEEEECSCCH
T ss_pred             HHhhhhccCCCCCEEEECCCCH
Confidence            2221111 24799999999853

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.70  E-value=0.0065  Score=51.12  Aligned_cols=75  Identities=16%  Similarity=0.237  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|+|+ |++|...++.+...|++|+++++++++.+.+.+ +             +....   .|..+.+    ..
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l-------------Ga~~v---i~~~~~~----~~  251 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L-------------GADEV---VNSRNAD----EM  251 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-------------TCSEE---EETTCHH----HH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-------------CCcEE---eccccHH----HH
Confidence            5789999998 899999988777889999999999988765432 2             21211   2333332    22


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      +++.   ..+|++|.++|..
T Consensus       252 ~~~~---~g~Dvvid~~g~~  268 (369)
T 1uuf_A          252 AAHL---KSFDFILNTVAAP  268 (369)
T ss_dssp             HTTT---TCEEEEEECCSSC
T ss_pred             HHhh---cCCCEEEECCCCH
Confidence            2222   5799999999854

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.67  E-value=0.008  Score=50.54  Aligned_cols=80  Identities=18%  Similarity=0.156  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC-hhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS-FKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~   90 (222)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+. .+             +....   .|..+ .+++.+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-------------Ga~~v---i~~~~~~~~~~~  256 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-------------GATDC---LNPRELDKPVQD  256 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-------------TCSEE---ECGGGCSSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-------------CCcEE---EccccccchHHH
Confidence            5789999996 8999998887778899 8999999998765442 22             22211   24332 123444


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+.++..  +.+|++|.++|..
T Consensus       257 ~v~~~~~--~g~Dvvid~~G~~  276 (376)
T 1e3i_A          257 VITELTA--GGVDYSLDCAGTA  276 (376)
T ss_dssp             HHHHHHT--SCBSEEEESSCCH
T ss_pred             HHHHHhC--CCccEEEECCCCH
Confidence            4444332  4799999999853

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.66  E-value=0.0032  Score=52.46  Aligned_cols=41  Identities=24%  Similarity=0.451  Sum_probs=35.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .|.+++|+|+ |++|...++.+...|++|+++++++++.+.+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  216 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA  216 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            5789999997 8999998888888899999999998877644

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=96.65  E-value=0.024  Score=49.51  Aligned_cols=44  Identities=20%  Similarity=0.246  Sum_probs=36.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIR   59 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~   59 (222)
                      +++.|.|+ |.+|..||..|++.|++|++++++++.+++..+.+.
T Consensus         6 ~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~   49 (483)
T 3mog_A            6 QTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIH   49 (483)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHH
Confidence            34556666 789999999999999999999999999888776553

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.59  E-value=0.0045  Score=51.84  Aligned_cols=42  Identities=31%  Similarity=0.415  Sum_probs=36.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      .|.+++|+|+ |++|...++.+...|++|+++++++++.+.+.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~  220 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM  220 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            5789999999 99999988877778999999999988765543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.57  E-value=0.0045  Score=52.17  Aligned_cols=80  Identities=21%  Similarity=0.214  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC-hhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS-FKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~   90 (222)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++++.+. ++             +....   .|..+ ..++.+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-~l-------------Ga~~v---i~~~~~~~~~~~  254 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-KF-------------GVNEF---VNPKDHDKPIQE  254 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-TT-------------TCCEE---ECGGGCSSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-------------CCcEE---EccccCchhHHH
Confidence            5789999998 9999998887777898 8999999998776332 22             22222   23332 234444


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+.++..  +.+|++|.++|..
T Consensus       255 ~i~~~~~--gg~D~vid~~g~~  274 (378)
T 3uko_A          255 VIVDLTD--GGVDYSFECIGNV  274 (378)
T ss_dssp             HHHHHTT--SCBSEEEECSCCH
T ss_pred             HHHHhcC--CCCCEEEECCCCH
Confidence            4444432  3799999999953

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.55  E-value=0.0059  Score=51.43  Aligned_cols=47  Identities=21%  Similarity=0.321  Sum_probs=41.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      +++||+++|.|. |.+|..+|+.|.+.|++|++.+++.++++++.+..
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999997 77999999999999999999999998887776654

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.54  E-value=0.0057  Score=51.65  Aligned_cols=83  Identities=14%  Similarity=0.159  Sum_probs=53.8

Q ss_pred             CCCEEEEec-CCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITG-CNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtG-as~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|.| |++++|...++.+...|++|+.+++++++.+.+.+ +             +....+   |..+. ++.+.
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-l-------------Ga~~~~---~~~~~-~~~~~  231 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-Q-------------GAVHVC---NAASP-TFMQD  231 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-T-------------TCSCEE---ETTST-THHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-C-------------CCcEEE---eCCCh-HHHHH
Confidence            467889987 89999998888777789999999999887655432 2             222111   33332 23222


Q ss_pred             HHHHHhhccceeEEEechhhHHh
Q psy7936          92 AQDINQTEANVHILINNAVYCIL  114 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l  114 (222)
                      +.++... ..+|++|.++|....
T Consensus       232 v~~~t~~-~g~d~v~d~~g~~~~  253 (379)
T 3iup_A          232 LTEALVS-TGATIAFDATGGGKL  253 (379)
T ss_dssp             HHHHHHH-HCCCEEEESCEEESH
T ss_pred             HHHHhcC-CCceEEEECCCchhh
Confidence            2222221 269999999986543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.53  E-value=0.0076  Score=50.05  Aligned_cols=78  Identities=14%  Similarity=0.199  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC--CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI--GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|.+++|+|+ +++|...++.+...  |++|+++++++++.+.+. .+             +....   .|..+.   ..
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l-------------Ga~~v---i~~~~~---~~  228 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL-------------GADYV---SEMKDA---ES  228 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH-------------TCSEE---ECHHHH---HH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh-------------CCCEE---eccccc---hH
Confidence            6889999999 89999988877777  999999999988765443 22             21111   132220   12


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.+++.. ...+|++|.++|..
T Consensus       229 ~~~~~~~-g~g~D~vid~~g~~  249 (344)
T 2h6e_A          229 LINKLTD-GLGASIAIDLVGTE  249 (344)
T ss_dssp             HHHHHHT-TCCEEEEEESSCCH
T ss_pred             HHHHhhc-CCCccEEEECCCCh
Confidence            2333332 23799999999864

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.52  E-value=0.0051  Score=52.52  Aligned_cols=42  Identities=19%  Similarity=0.150  Sum_probs=37.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      +.+++++|+|+ |.+|+.+++.+...|++|++++++.+.++.+
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            57899999996 8899999999999999999999999877654

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.50  E-value=0.009  Score=50.17  Aligned_cols=80  Identities=19%  Similarity=0.179  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC-hhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS-FKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~   90 (222)
                      .|.+++|+|+ |++|...++.....|+ +|+++++++++.+.+. .+             +....   .|..+ .+++.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-------------Ga~~v---i~~~~~~~~~~~  252 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-------------GATEC---LNPKDYDKPIYE  252 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-------------TCSEE---ECGGGCSSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-------------CCcEE---EecccccchHHH
Confidence            5789999996 8999988877777798 8999999988765443 22             22211   23332 123444


Q ss_pred             HHHHHHhhccceeEEEechhhH
Q psy7936          91 CAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+.++..  +.+|++|.++|..
T Consensus       253 ~i~~~t~--gg~Dvvid~~g~~  272 (373)
T 1p0f_A          253 VICEKTN--GGVDYAVECAGRI  272 (373)
T ss_dssp             HHHHHTT--SCBSEEEECSCCH
T ss_pred             HHHHHhC--CCCCEEEECCCCH
Confidence            3333322  4799999999853

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.48  E-value=0.01  Score=49.82  Aligned_cols=80  Identities=18%  Similarity=0.185  Sum_probs=52.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      -.|.+++|+||++++|...++.....|++|+.+. ++++.+ +.+.+             +....   .|..+. ++.+.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l-------------Ga~~v---i~~~~~-~~~~~  223 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR-------------GAEEV---FDYRAP-NLAQT  223 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT-------------TCSEE---EETTST-THHHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc-------------CCcEE---EECCCc-hHHHH
Confidence            3678999999999999998888888999988886 666554 22222             22222   233332 33333


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++..  +++|++|.++|..
T Consensus       224 v~~~t~--g~~d~v~d~~g~~  242 (371)
T 3gqv_A          224 IRTYTK--NNLRYALDCITNV  242 (371)
T ss_dssp             HHHHTT--TCCCEEEESSCSH
T ss_pred             HHHHcc--CCccEEEECCCch
Confidence            333222  4599999999864

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.48  E-value=0.0046  Score=50.85  Aligned_cols=35  Identities=26%  Similarity=0.420  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      .|.+++|+||+|++|...++.+...|++|+.++++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~  186 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK  186 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence            57899999999999999999888899999988743

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.39  E-value=0.0066  Score=50.77  Aligned_cols=76  Identities=13%  Similarity=0.185  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|+|+ +++|...++.+...|++|+++++++++.+.+.+.+             +....   .|..+.+.+    
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l-------------Ga~~v---i~~~~~~~~----  238 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL-------------GADDY---VIGSDQAKM----  238 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS-------------CCSCE---EETTCHHHH----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc-------------CCcee---eccccHHHH----
Confidence            5789999995 99999988877778999999999988765443222             22211   133332222    


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      .   +..+.+|++|.++|..
T Consensus       239 ~---~~~~g~D~vid~~g~~  255 (357)
T 2cf5_A          239 S---ELADSLDYVIDTVPVH  255 (357)
T ss_dssp             H---HSTTTEEEEEECCCSC
T ss_pred             H---HhcCCCCEEEECCCCh
Confidence            2   2224799999999854

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.38  E-value=0.01  Score=50.45  Aligned_cols=80  Identities=19%  Similarity=0.258  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|+|+ |++|...++-+...|+ +|+++++++++.+.+. .+             +....   .|-.+. ++.+.
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-------------Ga~~v---i~~~~~-~~~~~  273 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-EL-------------GADHV---IDPTKE-NFVEA  273 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HH-------------TCSEE---ECTTTS-CHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hc-------------CCCEE---EcCCCC-CHHHH
Confidence            5789999998 8999998887778899 9999999988765442 32             22221   233332 23322


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++.. ...+|++|.++|..
T Consensus       274 i~~~t~-g~g~D~vid~~g~~  293 (404)
T 3ip1_A          274 VLDYTN-GLGAKLFLEATGVP  293 (404)
T ss_dssp             HHHHTT-TCCCSEEEECSSCH
T ss_pred             HHHHhC-CCCCCEEEECCCCc
Confidence            222221 12699999999865

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.38  E-value=0.0082  Score=50.15  Aligned_cols=77  Identities=14%  Similarity=0.191  Sum_probs=50.0

Q ss_pred             CCCCEEEEecCCCchHHHH-HHHH-HhCCCE-EEEEeCChh---HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936          12 LDGKTVIITGCNTGIGKVT-AQTL-YGIGAK-VIMACRDVE---KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~-a~~l-~~~g~~-v~~~~r~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      +++.+++|+|+ |++|... ++.+ ...|++ |+.++++++   +.+.+. ++             +...  +  |..+.
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l-------------Ga~~--v--~~~~~  231 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL-------------DATY--V--DSRQT  231 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT-------------TCEE--E--ETTTS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc-------------CCcc--c--CCCcc
Confidence            34589999999 9999988 6655 467886 999999887   655432 22             2221  1  33322


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhH
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                       ++.+ +.++   .+.+|++|.++|..
T Consensus       232 -~~~~-i~~~---~gg~Dvvid~~g~~  253 (357)
T 2b5w_A          232 -PVED-VPDV---YEQMDFIYEATGFP  253 (357)
T ss_dssp             -CGGG-HHHH---SCCEEEEEECSCCH
T ss_pred             -CHHH-HHHh---CCCCCEEEECCCCh
Confidence             2222 3333   24799999999854

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.33  E-value=0.033  Score=46.15  Aligned_cols=51  Identities=18%  Similarity=0.197  Sum_probs=42.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      .+.+++++.|+|+ |.+|..++..|+..|.  .|++++++++.++....++...
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~   57 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDA   57 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTT
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhh
Confidence            4456778999996 9999999999999887  8999999999888777777654

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.33  E-value=0.023  Score=45.92  Aligned_cols=96  Identities=11%  Similarity=0.175  Sum_probs=59.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC---EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA---KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+++.|.|+ |.+|.++++.|.+.|+   +|++++|+.++++++.+...-..-....+.....+++++.+   .+..++.
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            346778887 7899999999999998   89999999998877765321000000000002345666555   3466777


Q ss_pred             HHHHHHhh-ccceeEEEechhhHH
Q psy7936          91 CAQDINQT-EANVHILINNAVYCI  113 (222)
Q Consensus        91 ~~~~i~~~-~~~id~li~~ag~~~  113 (222)
                      +++++... ..+=.++|.+++...
T Consensus        79 vl~~l~~~~l~~~~iiiS~~agi~  102 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAVGVT  102 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCTTCC
T ss_pred             HHHHHHhhccCCCeEEEEecCCCC
Confidence            77777654 322226777655443

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.32  E-value=0.02  Score=46.61  Aligned_cols=115  Identities=12%  Similarity=0.019  Sum_probs=64.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH--
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA--   92 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~--   92 (222)
                      +++.|.| .|.+|..+++.|++.|++|++++|++++.+++.+.-.........+.....+++++  -+.+...++.++  
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~--~vp~~~~~~~v~~~   84 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVI--LVVNAAQVRQVLFG   84 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEE--CCSSHHHHHHHHC-
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEE--ECCCHHHHHHHHhC
Confidence            4566776 57899999999999999999999999887776543100000000011112233333  334445566665  


Q ss_pred             -HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEE
Q psy7936          93 -QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        93 -~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~  137 (222)
                       +.+.....+=.++|++....+     ..++.++..+.+.|+.+..
T Consensus        85 ~~~l~~~l~~g~ivv~~st~~~-----~~~~~~~~~~~~~g~~~~~  125 (303)
T 3g0o_A           85 EDGVAHLMKPGSAVMVSSTISS-----ADAQEIAAALTALNLNMLD  125 (303)
T ss_dssp             -CCCGGGSCTTCEEEECSCCCH-----HHHHHHHHHHHTTTCEEEE
T ss_pred             hhhHHhhCCCCCEEEecCCCCH-----HHHHHHHHHHHHcCCeEEe
Confidence             444444434456666654333     2233344444445666554

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.31  E-value=0.033  Score=46.73  Aligned_cols=111  Identities=11%  Similarity=0.032  Sum_probs=67.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHH-------HHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE-------IRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      +++++.|.| .|.+|..+|+.|++.|++|++++|+.++.+++.+.       +....+     .....+++++.+--  .
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~-----~a~~~DvVi~~vp~--~   92 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCA-----KLVKPRVVWLMVPA--A   92 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHH-----HSCSSCEEEECSCG--G
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHh-----cCCCCCEEEEeCCH--H
Confidence            456788887 57899999999999999999999999887765432       111000     00112444444322  2


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEE
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~  137 (222)
                       .++.+++.+.....+=+++|.+....+.     .++.++.++.++|+.+..
T Consensus        93 -~v~~vl~~l~~~l~~g~iiId~st~~~~-----~~~~~~~~l~~~g~~~vd  138 (358)
T 4e21_A           93 -VVDSMLQRMTPLLAANDIVIDGGNSHYQ-----DDIRRADQMRAQGITYVD  138 (358)
T ss_dssp             -GHHHHHHHHGGGCCTTCEEEECSSCCHH-----HHHHHHHHHHTTTCEEEE
T ss_pred             -HHHHHHHHHHhhCCCCCEEEeCCCCChH-----HHHHHHHHHHHCCCEEEe
Confidence             6667777766554444667776554432     233444555566776543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.29  E-value=0.003  Score=49.53  Aligned_cols=96  Identities=11%  Similarity=0.088  Sum_probs=63.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      .+.++|.|+ |.+|..+++.|.+.|+ |++++++++..+.+.     .            .+.++..|.++.+.++++  
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~------------~~~~i~gd~~~~~~l~~a--   67 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S------------GANFVHGDPTRVSDLEKA--   67 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T------------TCEEEESCTTCHHHHHHT--
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c------------CCeEEEcCCCCHHHHHhc--
Confidence            347889997 7899999999999999 999999988765443     1            245788999988766543  


Q ss_pred             HHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEE
Q psy7936          94 DINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v  138 (222)
                          .....|.+|.+.+.-.   ...++-..++++.+ ++++.+.
T Consensus        68 ----~i~~ad~vi~~~~~d~---~n~~~~~~a~~~~~-~~~iia~  104 (234)
T 2aef_A           68 ----NVRGARAVIVDLESDS---ETIHCILGIRKIDE-SVRIIAE  104 (234)
T ss_dssp             ----TCTTCSEEEECCSCHH---HHHHHHHHHHHHCS-SSEEEEE
T ss_pred             ----CcchhcEEEEcCCCcH---HHHHHHHHHHHHCC-CCeEEEE
Confidence                1235688887765332   12333334445443 3455444

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.25  E-value=0.012  Score=47.98  Aligned_cols=42  Identities=19%  Similarity=0.203  Sum_probs=36.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE   57 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   57 (222)
                      +++.|.|+ |.+|..+|..|++.|++|++++|+++.+++..+.
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~   57 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   57 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            56888888 7899999999999999999999999887765443

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.22  E-value=0.0059  Score=49.53  Aligned_cols=42  Identities=26%  Similarity=0.402  Sum_probs=37.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA   51 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~   51 (222)
                      .+++||.++|.|+++-+|+.+|..|...|++|+++.|+...+
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L  197 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDL  197 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            568999999999999999999999999999999998765433

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.22  E-value=0.026  Score=47.30  Aligned_cols=79  Identities=11%  Similarity=0.105  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+. .+             +....+   |..+. ++.+.
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l-------------Ga~~vi---~~~~~-~~~~~  250 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-------------GATHVI---NSKTQ-DPVAA  250 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-------------TCSEEE---ETTTS-CHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-------------CCCEEe---cCCcc-CHHHH
Confidence            5789999995 8999988877777898 7999999988765442 22             222111   32222 22222


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++..  +.+|++|.++|..
T Consensus       251 ~~~~~~--gg~D~vid~~g~~  269 (371)
T 1f8f_A          251 IKEITD--GGVNFALESTGSP  269 (371)
T ss_dssp             HHHHTT--SCEEEEEECSCCH
T ss_pred             HHHhcC--CCCcEEEECCCCH
Confidence            222221  3799999999853

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.21  E-value=0.0063  Score=50.84  Aligned_cols=37  Identities=30%  Similarity=0.504  Sum_probs=30.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      .|.+++|+||+|++|...++-....|++++++.++.+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            5789999999999999888776677998887776544

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.20  E-value=0.012  Score=47.63  Aligned_cols=42  Identities=17%  Similarity=0.154  Sum_probs=37.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      +++.|.|++|.+|..+++.|.+.|++|++++|+.+..+++.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            478999999999999999999999999999999887766543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.16  E-value=0.014  Score=47.67  Aligned_cols=44  Identities=23%  Similarity=0.344  Sum_probs=38.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .++.+++++|.|+ |+||+++++.+...|++|++++|+.++.+.+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~  196 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARI  196 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            4678999999996 8899999999999999999999998765443

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.15  E-value=0.01  Score=47.45  Aligned_cols=47  Identities=28%  Similarity=0.379  Sum_probs=39.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      .++++ +++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.+.+
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            35778 8999996 77999999999999999999999998877666543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.14  E-value=0.0058  Score=49.32  Aligned_cols=44  Identities=30%  Similarity=0.389  Sum_probs=38.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      ++.+++++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            467899999996 79999999999999999999999988766554

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.12  E-value=0.026  Score=46.74  Aligned_cols=41  Identities=29%  Similarity=0.473  Sum_probs=33.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~   54 (222)
                      .|.+++|+|+ +++|...++-+... |.+|+.+++++++.+.+
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~  212 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA  212 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            5789999998 99998877666555 67999999999877644

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.10  E-value=0.031  Score=47.30  Aligned_cols=80  Identities=20%  Similarity=0.221  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|.|+ |++|...++.....|+ +|+++++++++++.+. .+             +..  .  .|.++.+.+.+.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l-------------Ga~--~--i~~~~~~~~~~~  245 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ-------------GFE--I--ADLSLDTPLHEQ  245 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-------------TCE--E--EETTSSSCHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc-------------CCc--E--EccCCcchHHHH
Confidence            5789999995 9999988877777898 7999999988765442 21             333  2  243333323332


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++.. ...+|++|.++|..
T Consensus       246 v~~~t~-g~g~Dvvid~~G~~  265 (398)
T 1kol_A          246 IAALLG-EPEVDCAVDAVGFE  265 (398)
T ss_dssp             HHHHHS-SSCEEEEEECCCTT
T ss_pred             HHHHhC-CCCCCEEEECCCCc
Confidence            322221 13699999999864

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.06  E-value=0.017  Score=51.49  Aligned_cols=93  Identities=15%  Similarity=0.162  Sum_probs=60.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      +.+++++|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++..        |
T Consensus       325 L~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iN--------P  395 (598)
T 3vh1_A          325 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF--------P  395 (598)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHC--------T
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHC--------C
Confidence            56788999986 5799999999999998 89999643                   246777788887764        5


Q ss_pred             CCeEEEEecCCCC------hhhHHHH-HHHHHhhccceeEEEechhhHH
Q psy7936          72 PGEVLIKKLDLAS------FKSIRDC-AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        72 ~~~~~~~~~D~~~------~~~v~~~-~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ..++..+..++..      ..+..++ .+.+.+.....|++|++.....
T Consensus       396 ~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~  444 (598)
T 3vh1_A          396 LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE  444 (598)
T ss_dssp             TCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGG
T ss_pred             CcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHH
Confidence            6677777766521      0100111 1112222235699998865444

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.06  E-value=0.015  Score=48.31  Aligned_cols=80  Identities=13%  Similarity=0.134  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|+|+ |++|...++.....|+ +|+++++++++.+.+ +++             +....   .|..+. ++.+.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-------------Ga~~v---i~~~~~-~~~~~  226 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY-------------GATDI---INYKNG-DIVEQ  226 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH-------------TCCEE---ECGGGS-CHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh-------------CCceE---EcCCCc-CHHHH
Confidence            5788999995 8999988887777898 899999988876433 223             22211   233332 22222


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++.. ...+|++|.++|..
T Consensus       227 v~~~t~-g~g~D~v~d~~g~~  246 (352)
T 3fpc_A          227 ILKATD-GKGVDKVVIAGGDV  246 (352)
T ss_dssp             HHHHTT-TCCEEEEEECSSCT
T ss_pred             HHHHcC-CCCCCEEEECCCCh
Confidence            222211 12699999999864

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.01  E-value=0.0066  Score=48.51  Aligned_cols=43  Identities=19%  Similarity=0.431  Sum_probs=37.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTA   55 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~   55 (222)
                      ++++ +++|.|+ ||+|++++..|.+.|+ +|++++|+.++.+++.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD  149 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4577 8999997 8999999999999998 9999999998765543

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.00  E-value=0.015  Score=47.57  Aligned_cols=40  Identities=18%  Similarity=0.232  Sum_probs=33.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .|.+++|+|+ |++|...++-.-..|++|+.++ ++++.+.+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~  181 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA  181 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH
Confidence            5789999999 9999988887777899999999 77766544

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.99  E-value=0.01  Score=48.65  Aligned_cols=41  Identities=22%  Similarity=0.374  Sum_probs=35.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      |+ ++|+|+++++|...++.+...|++|+++++++++.+.+.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            45 999999999999988888889999999999998776553

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.99  E-value=0.018  Score=46.77  Aligned_cols=43  Identities=23%  Similarity=0.392  Sum_probs=37.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAET   53 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   53 (222)
                      .++.|++++|.|+ |+||+.+++.+...|++|++++|+.++.+.
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            3678999999995 889999999999999999999999876543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.98  E-value=0.013  Score=47.30  Aligned_cols=40  Identities=15%  Similarity=0.155  Sum_probs=35.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA   51 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~   51 (222)
                      ++||+++|.|+++-+|+.+|+.|...|++|+++.++...+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L  187 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDI  187 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccH
Confidence            7899999999999999999999999999999998754433

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.96  E-value=0.028  Score=47.57  Aligned_cols=80  Identities=23%  Similarity=0.278  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++.+.    +.          +..  .  .|..+.+.+.+.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~l----------Ga~--~--i~~~~~~~~~~~  245 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DA----------GFE--T--IDLRNSAPLRDQ  245 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TT----------TCE--E--EETTSSSCHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----Hc----------CCc--E--EcCCCcchHHHH
Confidence            5789999997 9999988877767799 9999999988765432    21          332  2  243332221222


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++.. ...+|++|.++|..
T Consensus       246 ~~~~~~-g~g~Dvvid~~g~~  265 (398)
T 2dph_A          246 IDQILG-KPEVDCGVDAVGFE  265 (398)
T ss_dssp             HHHHHS-SSCEEEEEECSCTT
T ss_pred             HHHHhC-CCCCCEEEECCCCc
Confidence            222221 12699999999854

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.94  E-value=0.0029  Score=54.18  Aligned_cols=47  Identities=23%  Similarity=0.365  Sum_probs=38.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEE-EEeC----------ChhHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVI-MACR----------DVEKAETTASE   57 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~-~~~r----------~~~~~~~~~~~   57 (222)
                      .+++||+++|+| .|.+|..+++.|.+.|++|+ +.++          +.+.+.++.+.
T Consensus       214 ~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          214 LDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            367899999998 78899999999999999888 7777          55666666554

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=95.93  E-value=0.17  Score=41.87  Aligned_cols=115  Identities=10%  Similarity=0.111  Sum_probs=71.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ...+++.|+|+ |.+|..++..|+..|.  .|++++++++.++....++......      +...-.....   +.+   
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~------~~~~~i~~~~---d~~---   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLF------LKTPKIVSSK---DYS---   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGG------CSCCEEEECS---SGG---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhc------cCCCeEEEcC---CHH---
Confidence            45678999998 8999999999999987  8999999998888887777654200      1111111111   211   


Q ss_pred             HHHHHHHhhccceeEEEechhhHH--------hhh-HHHHHHHHHhh---cCCCCeEEEEEeCCcccCCc
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI--------LSN-NILFYSILFYA---IPGKNVNVYAVHPGIVKTEL  147 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~--------l~~-~~~~~~~la~~---~~~~gI~v~~v~PG~v~T~~  147 (222)
                              ....-|++|..||...        +.+ +....+.++..   +.+.++-++.-+|--+.|..
T Consensus        84 --------~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvdi~t~~  145 (331)
T 4aj2_A           84 --------VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVDILTYV  145 (331)
T ss_dssp             --------GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHH
T ss_pred             --------HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHH
Confidence                    1235699999998765        111 33444433332   35556666665665544433

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.91  E-value=0.024  Score=45.77  Aligned_cols=87  Identities=17%  Similarity=0.106  Sum_probs=54.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHH-------HHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE-------IRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +++.|.|+ |.+|..+++.|++.|++|++++|++++.+++.+.       +....        ...+++++  =+.+...
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~--------~~aDvvi~--~vp~~~~   70 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVV--------ESCPVTFA--MLADPAA   70 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHH--------HHCSEEEE--CCSSHHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHH--------hcCCEEEE--EcCCHHH
Confidence            35777775 7899999999999999999999999887766532       11100        01233333  3344556


Q ss_pred             HHHHH---HHHHhhccceeEEEechhhH
Q psy7936          88 IRDCA---QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        88 v~~~~---~~i~~~~~~id~li~~ag~~  112 (222)
                      ++.++   +.+.....+=.++|++.+..
T Consensus        71 ~~~v~~~~~~l~~~l~~~~~vi~~st~~   98 (287)
T 3pef_A           71 AEEVCFGKHGVLEGIGEGRGYVDMSTVD   98 (287)
T ss_dssp             HHHHHHSTTCHHHHCCTTCEEEECSCCC
T ss_pred             HHHHHcCcchHhhcCCCCCEEEeCCCCC
Confidence            77666   55554443335667665443

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=95.91  E-value=0.085  Score=43.65  Aligned_cols=47  Identities=19%  Similarity=0.215  Sum_probs=40.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      .+++.|+|+ |.+|..++..|+..|.  .|+++++++++++....++...
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~   53 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG   53 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc
Confidence            457889996 9999999999999886  8999999999888877777654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.89  E-value=0.0062  Score=50.22  Aligned_cols=39  Identities=26%  Similarity=0.455  Sum_probs=34.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      +++|+||+|++|...++.+...|++|+++++++++.+.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999988888899999999998776544

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.82  E-value=0.017  Score=46.62  Aligned_cols=45  Identities=22%  Similarity=0.349  Sum_probs=39.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEI   58 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i   58 (222)
                      .+++++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+.+
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4678999995 7899999999999997 8999999999888877654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.81  E-value=0.017  Score=47.09  Aligned_cols=40  Identities=20%  Similarity=0.272  Sum_probs=36.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      .+++||.++|.|+++-+|+.+|+.|...|++|+++.|...
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~  200 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS  200 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence            5689999999999998999999999999999999987443

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.80  E-value=0.018  Score=48.15  Aligned_cols=81  Identities=16%  Similarity=0.183  Sum_probs=58.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeC----------C---------hhHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACR----------D---------VEKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r----------~---------~~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      |.+..++|.|+ ||+|.++++.|+..|. ++.++|.          +         ..+.+.+.+.+....        |
T Consensus        34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln--------p  104 (346)
T 1y8q_A           34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN--------P  104 (346)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC--------T
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC--------C
Confidence            45678999986 6899999999999998 8999853          2         245777777777764        5


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechh
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAV  110 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag  110 (222)
                      ..++..+..++.+.  ...+       +...|++|.+..
T Consensus       105 ~v~v~~~~~~~~~~--~~~~-------~~~~dvVv~~~d  134 (346)
T 1y8q_A          105 MVDVKVDTEDIEKK--PESF-------FTQFDAVCLTCC  134 (346)
T ss_dssp             TSEEEEECSCGGGC--CHHH-------HTTCSEEEEESC
T ss_pred             CeEEEEEecccCcc--hHHH-------hcCCCEEEEcCC
Confidence            66777777766541  1222       235788888754

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.78  E-value=0.023  Score=46.14  Aligned_cols=93  Identities=8%  Similarity=0.043  Sum_probs=56.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      +++.|.| .|.+|..+++.|++.|++|++++|++++.+++.+.--... ....+... .++++  .=+.+...++.+++.
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-~~~~~~~~-aDvvi--~~vp~~~~~~~v~~~   90 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLA-DSVADVAA-ADLIH--ITVLDDAQVREVVGE   90 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEEC-SSHHHHTT-SSEEE--ECCSSHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEc-CCHHHHHh-CCEEE--EECCChHHHHHHHHH
Confidence            3566777 5779999999999999999999999987776653200000 00000001 23333  334445667777777


Q ss_pred             HHhhccceeEEEechhhH
Q psy7936          95 INQTEANVHILINNAVYC  112 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~  112 (222)
                      +.....+=.++|++....
T Consensus        91 l~~~l~~g~ivv~~st~~  108 (296)
T 3qha_A           91 LAGHAKPGTVIAIHSTIS  108 (296)
T ss_dssp             HHTTCCTTCEEEECSCCC
T ss_pred             HHHhcCCCCEEEEeCCCC
Confidence            766544445677665543

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=95.76  E-value=0.021  Score=49.24  Aligned_cols=81  Identities=20%  Similarity=0.208  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCCCC
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDKKP   72 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~~~   72 (222)
                      .+..++|.|+ ||+|.++++.|+..|. ++.++|..                   ..+.+.+.+.+++..        |.
T Consensus        39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~ln--------p~  109 (434)
T 1tt5_B           39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRV--------PN  109 (434)
T ss_dssp             HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHS--------TT
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhC--------CC
Confidence            5678999997 7799999999999998 89998642                   135666677777654        56


Q ss_pred             CeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhh
Q psy7936          73 GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        73 ~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      .++..+..++.+..  ..+       +...|++|++...
T Consensus       110 v~v~~~~~~i~~~~--~~~-------~~~~DlVi~~~Dn  139 (434)
T 1tt5_B          110 CNVVPHFNKIQDFN--DTF-------YRQFHIIVCGLDS  139 (434)
T ss_dssp             CCCEEEESCGGGBC--HHH-------HTTCSEEEECCSC
T ss_pred             CEEEEEecccchhh--HHH-------hcCCCEEEECCCC
Confidence            67777777776532  122       2357999988553

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.76  E-value=0.015  Score=47.12  Aligned_cols=39  Identities=23%  Similarity=0.296  Sum_probs=35.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      .+++||.++|.|.++-+|+.+|..|...|++|+++.+..
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            568999999999999899999999999999999987643

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.72  E-value=0.033  Score=43.54  Aligned_cols=94  Identities=16%  Similarity=0.191  Sum_probs=60.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh-HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .+++||.+||.|+. .+|..-++.|.+.|++|++++.+.. .++++.    .           .+++.++.-++...   
T Consensus        27 l~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~----~-----------~~~i~~i~~~~~~~---   87 (223)
T 3dfz_A           27 LDLKGRSVLVVGGG-TIATRRIKGFLQEGAAITVVAPTVSAEINEWE----A-----------KGQLRVKRKKVGEE---   87 (223)
T ss_dssp             ECCTTCCEEEECCS-HHHHHHHHHHGGGCCCEEEECSSCCHHHHHHH----H-----------TTSCEEECSCCCGG---
T ss_pred             EEcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH----H-----------cCCcEEEECCCCHh---
Confidence            57899999999985 6999999999999999999987643 222222    1           22445555444321   


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEE
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v  138 (222)
                               .....|.+|.+.+...+   +..+   +.... .||.||.+
T Consensus        88 ---------dL~~adLVIaAT~d~~~---N~~I---~~~ak-~gi~VNvv  121 (223)
T 3dfz_A           88 ---------DLLNVFFIVVATNDQAV---NKFV---KQHIK-NDQLVNMA  121 (223)
T ss_dssp             ---------GSSSCSEEEECCCCTHH---HHHH---HHHSC-TTCEEEC-
T ss_pred             ---------HhCCCCEEEECCCCHHH---HHHH---HHHHh-CCCEEEEe
Confidence                     12357888887765443   2222   22223 68888875

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.69  E-value=0.038  Score=44.93  Aligned_cols=81  Identities=14%  Similarity=0.155  Sum_probs=53.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      +++.|.||.|.||.++++.|.+.|++|++++|+.+.  +..+.+            ...+++++.+-..   .+..++++
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--~~~~~~------------~~aDvVilavp~~---~~~~vl~~   84 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--VAESIL------------ANADVVIVSVPIN---LTLETIER   84 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--GHHHHH------------TTCSEEEECSCGG---GHHHHHHH
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--CHHHHh------------cCCCEEEEeCCHH---HHHHHHHH
Confidence            468899999999999999999999999999998753  111111            2446666665443   36666666


Q ss_pred             HHhhccceeEEEechhhH
Q psy7936          95 INQTEANVHILINNAVYC  112 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~  112 (222)
                      +.....+=-+++..+++.
T Consensus        85 l~~~l~~~~iv~~~~svk  102 (298)
T 2pv7_A           85 LKPYLTENMLLADLTSVK  102 (298)
T ss_dssp             HGGGCCTTSEEEECCSCC
T ss_pred             HHhhcCCCcEEEECCCCC
Confidence            654332223555555543

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.69  E-value=0.12  Score=38.31  Aligned_cols=108  Identities=11%  Similarity=0.021  Sum_probs=69.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+.++|=.|+..|.   ++..|++.+.+|+.++.+++.++...+.++..         .-.++.+++.|..+....    
T Consensus        22 ~~~~vLDiGcG~G~---~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~---------~~~~v~~~~~~~~~l~~~----   85 (185)
T 3mti_A           22 DESIVVDATMGNGN---DTAFLAGLSKKVYAFDVQEQALGKTSQRLSDL---------GIENTELILDGHENLDHY----   85 (185)
T ss_dssp             TTCEEEESCCTTSH---HHHHHHTTSSEEEEEESCHHHHHHHHHHHHHH---------TCCCEEEEESCGGGGGGT----
T ss_pred             CCCEEEEEcCCCCH---HHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc---------CCCcEEEEeCcHHHHHhh----
Confidence            46788888887653   34445556889999999999988888777654         124677777665543211    


Q ss_pred             HHHHhhccceeEEEechhhHHh---------hhHHHHHHHHHhhcCCCCeEEEEEeCC
Q psy7936          93 QDINQTEANVHILINNAVYCIL---------SNNILFYSILFYAIPGKNVNVYAVHPG  141 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l---------~~~~~~~~~la~~~~~~gI~v~~v~PG  141 (222)
                           ....+|+++.|.++...         .....+.+.+.+-+++.|.-+..+.+|
T Consensus        86 -----~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~  138 (185)
T 3mti_A           86 -----VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG  138 (185)
T ss_dssp             -----CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred             -----ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence                 12478999988665442         123445566667777778777776665

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.68  E-value=0.025  Score=45.00  Aligned_cols=96  Identities=17%  Similarity=0.239  Sum_probs=55.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCE-EEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAK-VIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +.++.|.|+ |.+|..+++.|.+.|++ |.+++|+.++.+++.+.+.-.......+.....+++++..  . ...+..++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av--~-~~~~~~v~   85 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL--K-DSAFAELL   85 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC--C-HHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec--C-HHHHHHHH
Confidence            346888887 88999999999999997 8999999988877665421100000001111223333322  2 22456666


Q ss_pred             HHHHhhccceeEEEechhhHH
Q psy7936          93 QDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.+.....+=.++|++.+...
T Consensus        86 ~~l~~~~~~~~ivv~~s~~~~  106 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGSIP  106 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTTSC
T ss_pred             HHHHhhcCCCcEEEECCCCCc
Confidence            666543322245666665443

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.66  E-value=0.066  Score=43.99  Aligned_cols=43  Identities=19%  Similarity=0.235  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      ..+++.|.|+ |.+|..+++.|++.|++|++++|++++.+++.+
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~   72 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAA   72 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH
Confidence            3457777766 779999999999999999999999988776653

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.64  E-value=0.015  Score=47.09  Aligned_cols=40  Identities=23%  Similarity=0.320  Sum_probs=35.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      .+++||.++|.|+++-+|+.+|+.|...|++|+++.|+..
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~  196 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT  196 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch
Confidence            4689999999999998999999999999999999876543

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.62  E-value=0.022  Score=46.25  Aligned_cols=43  Identities=14%  Similarity=0.192  Sum_probs=37.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE   52 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~   52 (222)
                      .++.||.++|.|++.-+|+.+|+.|...|++|+++.+....+.
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~  197 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR  197 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            4689999999999998999999999999999999986665443

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.55  E-value=0.043  Score=46.41  Aligned_cols=44  Identities=23%  Similarity=0.148  Sum_probs=38.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      +.+++++|.|+ |.+|..+++.+...|++|++++|+.++++.+.+
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  225 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS  225 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            46789999999 789999999999999999999999988776643

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.52  E-value=0.02  Score=49.71  Aligned_cols=73  Identities=12%  Similarity=0.255  Sum_probs=55.9

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      .++|.|+. .+|+.+|+.|.+.|++|++++++++.++++.+.+               .+..+..|-++++.++++  .+
T Consensus         5 ~iiI~G~G-~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---------------~~~~i~Gd~~~~~~L~~A--gi   66 (461)
T 4g65_A            5 KIIILGAG-QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---------------DLRVVNGHASHPDVLHEA--GA   66 (461)
T ss_dssp             EEEEECCS-HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---------------SCEEEESCTTCHHHHHHH--TT
T ss_pred             EEEEECCC-HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---------------CcEEEEEcCCCHHHHHhc--CC
Confidence            57888884 6999999999999999999999999887765432               456788899988877765  11


Q ss_pred             HhhccceeEEEechh
Q psy7936          96 NQTEANVHILINNAV  110 (222)
Q Consensus        96 ~~~~~~id~li~~ag  110 (222)
                          ..-|.+|...+
T Consensus        67 ----~~ad~~ia~t~   77 (461)
T 4g65_A           67 ----QDADMLVAVTN   77 (461)
T ss_dssp             ----TTCSEEEECCS
T ss_pred             ----CcCCEEEEEcC
Confidence                24577776544

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.51  E-value=0.021  Score=44.23  Aligned_cols=40  Identities=25%  Similarity=0.370  Sum_probs=34.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .+++.|.| +|.+|.++++.|.+.|++|++++|+.++.+++
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~   67 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL   67 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            35688888 79999999999999999999999998876554

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.48  E-value=0.024  Score=51.12  Aligned_cols=84  Identities=14%  Similarity=0.186  Sum_probs=58.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh-------------------hHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV-------------------EKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      |.+..++|.|+ ||+|..+++.|+..|. ++.+++...                   .+.+.+.+.++...        |
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iN--------P   85 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFY--------P   85 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTC--------T
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHC--------C
Confidence            34568999988 7899999999999998 999988531                   23555566666654        5


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhh
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      ..++..+..++........+       +..+|++|++...
T Consensus        86 ~v~V~a~~~~i~~~~~~~~~-------~~~~DlVvda~Dn  118 (640)
T 1y8q_B           86 KANIVAYHDSIMNPDYNVEF-------FRQFILVMNALDN  118 (640)
T ss_dssp             TCEEEEEESCTTSTTSCHHH-------HTTCSEEEECCSC
T ss_pred             CCeEEEEecccchhhhhHhh-------hcCCCEEEECCCC
Confidence            67888888887653211122       2467999988543

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.48  E-value=0.039  Score=47.68  Aligned_cols=39  Identities=23%  Similarity=0.316  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      .++.+|.++|.|. ++.|.++|+.|.++|++|.+.+++..
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~   43 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPF   43 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence            4578999999999 78999999999999999999998653

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=95.48  E-value=0.049  Score=44.78  Aligned_cols=33  Identities=18%  Similarity=0.222  Sum_probs=30.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCC--CEEEEEeCCh
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDV   48 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~   48 (222)
                      ++.|+||+|.+|..++..|+..|  ..|+++++++
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~   36 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence            57899999999999999999988  5899999987

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.42  E-value=0.085  Score=45.10  Aligned_cols=40  Identities=30%  Similarity=0.452  Sum_probs=35.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      ..++|.|. |.+|+.+++.|.+.|+.|++++++++..+.+.
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~   44 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR   44 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            35889997 77999999999999999999999999877654

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.39  E-value=0.064  Score=44.31  Aligned_cols=40  Identities=30%  Similarity=0.419  Sum_probs=31.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAET   53 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~   53 (222)
                      .|.+++|.|+ +++|...+..+... |++|+.+++++++++.
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~  203 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL  203 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh
Confidence            5789999987 77887777777765 6799999999987643

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.39  E-value=0.021  Score=46.63  Aligned_cols=42  Identities=14%  Similarity=0.190  Sum_probs=37.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA   51 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~   51 (222)
                      .++.||.++|.|++.-+|+.+|+.|...|++|+++.++...+
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L  202 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL  202 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccH
Confidence            468999999999999999999999999999999997665443

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.35  E-value=0.11  Score=42.89  Aligned_cols=81  Identities=19%  Similarity=0.168  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|.|+ +++|...++.+...|+ .++++++++++++.+ +++             +....+   |.++. +..+.
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~l-------------Ga~~~i---~~~~~-~~~~~  220 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KSF-------------GAMQTF---NSSEM-SAPQM  220 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-------------TCSEEE---ETTTS-CHHHH
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HHc-------------CCeEEE---eCCCC-CHHHH
Confidence            6789999987 8999998888888898 567788888875433 222             222222   33322 23333


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ...+. .....|+++.++|...
T Consensus       221 ~~~~~-~~~g~d~v~d~~G~~~  241 (346)
T 4a2c_A          221 QSVLR-ELRFNQLILETAGVPQ  241 (346)
T ss_dssp             HHHHG-GGCSSEEEEECSCSHH
T ss_pred             HHhhc-ccCCcccccccccccc
Confidence            33432 2356899999988543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.29  E-value=0.059  Score=45.90  Aligned_cols=44  Identities=20%  Similarity=0.173  Sum_probs=38.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      +.+.+++|.|+ |.+|..+++.+...|++|++++++.+.++.+.+
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            46789999999 789999999999999999999999987766543

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.26  E-value=0.13  Score=41.04  Aligned_cols=104  Identities=15%  Similarity=0.154  Sum_probs=74.3

Q ss_pred             CCCEEEEecCCCc-hHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTG-IGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.++|=.|++.| +...+++.+...|++|+.++.+++-++...+.+....        ...++.+++.|+.+..     
T Consensus        70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~--------~~~~v~~~~~D~~~~~-----  136 (261)
T 4gek_A           70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK--------APTPVDVIEGDIRDIA-----  136 (261)
T ss_dssp             TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC--------CSSCEEEEESCTTTCC-----
T ss_pred             CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc--------cCceEEEeeccccccc-----
Confidence            4668998888755 4556666666678899999999998888887776542        3457899999987642     


Q ss_pred             HHHHHhhccceeEEEechhhHHhhh--HHHHHHHHHhhcCCCCeEEE
Q psy7936          92 AQDINQTEANVHILINNAVYCILSN--NILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~--~~~~~~~la~~~~~~gI~v~  136 (222)
                             +...|+++.+.....+..  ...+.+.+.+-+.+-|+-+.
T Consensus       137 -------~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii  176 (261)
T 4gek_A          137 -------IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVL  176 (261)
T ss_dssp             -------CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             -------ccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEE
Confidence                   245788888765444322  44667778888887776554

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.20  E-value=0.034  Score=45.85  Aligned_cols=100  Identities=15%  Similarity=0.051  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHH---------HHHHHHHHHhhhhhcccCCCCCeEEEEec
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKA---------ETTASEIRKHFEVATSEDKKPGEVLIKKL   80 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~---------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (222)
                      ..+.||++.|.|. |.||.++|+.|...|.+|+.++|+.+..         .++.+.+.            ..+++++.+
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~------------~aDiV~l~~  201 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLN------------QTRVLINLL  201 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHH------------TCSEEEECC
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHh------------hCCEEEEec
Confidence            5678999999987 6799999999999999999999876421         22222222            347777777


Q ss_pred             CCCChhhHHHHH-HHHHhhccceeEEEechhhHHhhhHHHHHHHHH
Q psy7936          81 DLASFKSIRDCA-QDINQTEANVHILINNAVYCILSNNILFYSILF  125 (222)
Q Consensus        81 D~~~~~~v~~~~-~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la  125 (222)
                      -++..  .+.++ ++.... -+...++-|.+-..++.-..+.+.|.
T Consensus       202 Plt~~--t~~li~~~~l~~-mk~gailIN~aRG~~vd~~aL~~aL~  244 (315)
T 3pp8_A          202 PNTAQ--TVGIINSELLDQ-LPDGAYVLNLARGVHVQEADLLAALD  244 (315)
T ss_dssp             CCCGG--GTTCBSHHHHTT-SCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred             CCchh--hhhhccHHHHhh-CCCCCEEEECCCChhhhHHHHHHHHH
Confidence            76642  22222 111222 24567777777777777677777664

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.19  E-value=0.051  Score=44.68  Aligned_cols=95  Identities=12%  Similarity=0.076  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHh--hhhhccc-CCCCCeEEEEecCCCChhh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKH--FEVATSE-DKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~--~~~~~~~-~~~~~~~~~~~~D~~~~~~   87 (222)
                      ..+++.|.| .|.||..+++.|.+.|+  +|++++|+++.++...+. ...  .-....+ .....+++++.+-..   .
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~~~~~~~~~~~~~~~~aDvVilavp~~---~  106 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GIIDEGTTSIAKVEDFSPDFVMLSSPVR---T  106 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSCSEEESCTTGGGGGCCSEEEECSCGG---G
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CCcchhcCCHHHHhhccCCEEEEeCCHH---H
Confidence            346788998 68899999999999999  999999999877665421 000  0000000 012335555554433   3


Q ss_pred             HHHHHHHHHhhccceeEEEechhhH
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +..+++++.....+=-+++.++++.
T Consensus       107 ~~~vl~~l~~~l~~~~iv~d~~Svk  131 (314)
T 3ggo_A          107 FREIAKKLSYILSEDATVTDQGSVK  131 (314)
T ss_dssp             HHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred             HHHHHHHHhhccCCCcEEEECCCCc
Confidence            4556666655433223555555443

>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}

Probab=95.14  E-value=0.32  Score=38.75  Aligned_cols=102  Identities=13%  Similarity=0.094  Sum_probs=74.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+.++|=.|+..|.   ++..|++.|++|+.++.++..++.+.+.+...          +.++.++.+|+.+...     
T Consensus       120 ~~~~vLD~GcG~G~---~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~----------~~~~~~~~~d~~~~~~-----  181 (286)
T 3m70_A          120 SPCKVLDLGCGQGR---NSLYLSLLGYDVTSWDHNENSIAFLNETKEKE----------NLNISTALYDINAANI-----  181 (286)
T ss_dssp             CSCEEEEESCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCGGGCCC-----
T ss_pred             CCCcEEEECCCCCH---HHHHHHHCCCeEEEEECCHHHHHHHHHHHHHc----------CCceEEEEeccccccc-----
Confidence            56789988888764   45556777899999999999888877777653          3488999999876432     


Q ss_pred             HHHHhhccceeEEEechhhHHhh--hHHHHHHHHHhhcCCCCeEEEEE
Q psy7936          93 QDINQTEANVHILINNAVYCILS--NNILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~--~~~~~~~~la~~~~~~gI~v~~v  138 (222)
                            .+.+|+++.+.....+.  ....+.+.+...+++.|+-+...
T Consensus       182 ------~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  223 (286)
T 3m70_A          182 ------QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA  223 (286)
T ss_dssp             ------CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ------cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence                  35799999988665442  25677888888887777644433

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=95.12  E-value=0.23  Score=41.47  Aligned_cols=41  Identities=20%  Similarity=0.257  Sum_probs=35.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      .++.|.|+ |.+|.++|..|++.|++|.+++|+++..+.+.+
T Consensus        30 mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~   70 (356)
T 3k96_A           30 HPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQA   70 (356)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHH
T ss_pred             CeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            46778886 779999999999999999999999887766654

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=95.11  E-value=0.013  Score=46.24  Aligned_cols=91  Identities=12%  Similarity=0.142  Sum_probs=52.6

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC----EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA----KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~----~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ++.|.| .|.+|.++++.|.+.|+    +|++++|++++.+++.+...-..-....+.....+++++.+   ....++.+
T Consensus         4 ~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav---~~~~~~~v   79 (247)
T 3gt0_A            4 QIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSI---KPDLYASI   79 (247)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECS---CTTTHHHH
T ss_pred             eEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEe---CHHHHHHH
Confidence            466777 67899999999999998    99999999998887765431100000000001235556555   34556666


Q ss_pred             HHHHHhhccceeEEEechh
Q psy7936          92 AQDINQTEANVHILINNAV  110 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag  110 (222)
                      ++.+.....+=.++|.+++
T Consensus        80 ~~~l~~~l~~~~~vvs~~~   98 (247)
T 3gt0_A           80 INEIKEIIKNDAIIVTIAA   98 (247)
T ss_dssp             C---CCSSCTTCEEEECSC
T ss_pred             HHHHHhhcCCCCEEEEecC
Confidence            6666443322235665544

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.10  E-value=0.087  Score=45.04  Aligned_cols=72  Identities=11%  Similarity=0.112  Sum_probs=50.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +-+.+|+++|.|+. -+|+.+++.+.+.|++|++++.+.......   +             ..  ..+..|..|.+.+.
T Consensus        31 ~~~~~~~IlIlG~G-~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~---~-------------ad--~~~~~~~~d~~~l~   91 (419)
T 4e4t_A           31 PILPGAWLGMVGGG-QLGRMFCFAAQSMGYRVAVLDPDPASPAGA---V-------------AD--RHLRAAYDDEAALA   91 (419)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCTTCHHHH---H-------------SS--EEECCCTTCHHHHH
T ss_pred             cCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCcCchhh---h-------------CC--EEEECCcCCHHHHH
Confidence            45689999999875 599999999999999999998765432111   1             01  24457777777777


Q ss_pred             HHHHHHHhhccceeEEEe
Q psy7936          90 DCAQDINQTEANVHILIN  107 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~  107 (222)
                      ++++       ++|+++.
T Consensus        92 ~~a~-------~~D~V~~  102 (419)
T 4e4t_A           92 ELAG-------LCEAVST  102 (419)
T ss_dssp             HHHH-------HCSEEEE
T ss_pred             HHHh-------cCCEEEE
Confidence            7663       3566653

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=95.10  E-value=0.064  Score=44.19  Aligned_cols=47  Identities=19%  Similarity=0.143  Sum_probs=37.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC--hhHHHHHHHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD--VEKAETTASEIR   59 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~i~   59 (222)
                      ++.+++.|+|+ |.+|..+|..|+..|. .|++++++  ++..+....++.
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~   55 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDML   55 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHH
Confidence            45678999997 9999999999999999 99999999  555555444444

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.08  E-value=0.055  Score=45.51  Aligned_cols=71  Identities=18%  Similarity=0.109  Sum_probs=49.1

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936           5 KAVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus         5 ~~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      +++....+.+|+++|.|+. .+|+.+++.+.+.|++|++++.+......      ..          ..  .++..|..|
T Consensus         3 ~~~~~~~~~~~~IlIlG~G-~lg~~la~aa~~lG~~viv~d~~~~~p~~------~~----------ad--~~~~~~~~d   63 (377)
T 3orq_A            3 AMNFNKLKFGATIGIIGGG-QLGKMMAQSAQKMGYKVVVLDPSEDCPCR------YV----------AH--EFIQAKYDD   63 (377)
T ss_dssp             CSSCCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCTTCTTG------GG----------SS--EEEECCTTC
T ss_pred             ccccccCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECCCCChhh------hh----------CC--EEEECCCCC
Confidence            4444455688999999964 59999999999999999999876542100      00          01  245577777


Q ss_pred             hhhHHHHHHH
Q psy7936          85 FKSIRDCAQD   94 (222)
Q Consensus        85 ~~~v~~~~~~   94 (222)
                      .+.+.++++.
T Consensus        64 ~~~l~~~~~~   73 (377)
T 3orq_A           64 EKALNQLGQK   73 (377)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            7777776553

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.07  E-value=0.036  Score=43.69  Aligned_cols=40  Identities=23%  Similarity=0.439  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK   50 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~   50 (222)
                      ..+.++++.|.| .|.+|.++|+.|++.|++|++++|+++.
T Consensus        15 ~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           15 LYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             cccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            446778888886 7789999999999999999999999886

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.06  E-value=0.092  Score=40.33  Aligned_cols=66  Identities=15%  Similarity=0.260  Sum_probs=45.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..+.++++.|.| .|.+|.+++..|++.|++|++++|+++          ..         ...++.++.+-   ...++
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~----------~~---------~~aD~vi~av~---~~~~~   71 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ----------AT---------TLGEIVIMAVP---YPALA   71 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC----------CS---------SCCSEEEECSC---HHHHH
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH----------Hh---------ccCCEEEEcCC---cHHHH
Confidence            345677899999 688999999999999999999999876          11         23456665554   45566


Q ss_pred             HHHHHHHhh
Q psy7936          90 DCAQDINQT   98 (222)
Q Consensus        90 ~~~~~i~~~   98 (222)
                      .+++.+...
T Consensus        72 ~v~~~l~~~   80 (209)
T 2raf_A           72 ALAKQYATQ   80 (209)
T ss_dssp             HHHHHTHHH
T ss_pred             HHHHHHHHh
Confidence            777666543

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=95.05  E-value=0.59  Score=37.79  Aligned_cols=100  Identities=13%  Similarity=0.147  Sum_probs=69.7

Q ss_pred             CCCEEEEecCCCc-hHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTG-IGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+.++|-.|+..| +...+++.+   |++|+.++.+++.++...+.+....        ...++.++..|+.+..     
T Consensus        90 ~~~~vLDiGcG~G~~~~~la~~~---~~~v~gvD~s~~~~~~a~~~~~~~~--------~~~~v~~~~~d~~~~~-----  153 (318)
T 2fk8_A           90 PGMTLLDIGCGWGTTMRRAVERF---DVNVIGLTLSKNQHARCEQVLASID--------TNRSRQVLLQGWEDFA-----  153 (318)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHTSC--------CSSCEEEEESCGGGCC-----
T ss_pred             CcCEEEEEcccchHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcC--------CCCceEEEECChHHCC-----
Confidence            5678999998754 333344333   7899999999998887777665431        1246888888886531     


Q ss_pred             HHHHHhhccceeEEEechhhHHh--hhHHHHHHHHHhhcCCCCeEEE
Q psy7936          92 AQDINQTEANVHILINNAVYCIL--SNNILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l--~~~~~~~~~la~~~~~~gI~v~  136 (222)
                              +.+|+++.+.....+  .+...+.+.+..-+++.|.-+.
T Consensus       154 --------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~  192 (318)
T 2fk8_A          154 --------EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV  192 (318)
T ss_dssp             --------CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred             --------CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence                    468999988665555  4567778888888888775443

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.02  E-value=0.11  Score=41.21  Aligned_cols=78  Identities=8%  Similarity=0.108  Sum_probs=53.0

Q ss_pred             EEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++.|.|++|.+|+.+++.+.+. +..|+......+.++++.   ..           ..+   +..|++.++.+...+..
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~---~~-----------~~D---vvIDfT~p~a~~~~~~~   64 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT---DG-----------NTE---VVIDFTHPDVVMGNLEF   64 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH---HT-----------TCC---EEEECSCTTTHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh---cc-----------CCc---EEEEccChHHHHHHHHH
Confidence            4889999999999999999876 788775543333333222   11           123   44588888888887776


Q ss_pred             HHhhccceeEEEechhhH
Q psy7936          95 INQTEANVHILINNAVYC  112 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~  112 (222)
                      +.+.  .++++|...|..
T Consensus        65 a~~~--g~~~VigTTG~~   80 (245)
T 1p9l_A           65 LIDN--GIHAVVGTTGFT   80 (245)
T ss_dssp             HHHT--TCEEEECCCCCC
T ss_pred             HHHc--CCCEEEcCCCCC
Confidence            6554  577888777643

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=94.95  E-value=0.86  Score=34.48  Aligned_cols=98  Identities=10%  Similarity=0.002  Sum_probs=66.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+.++|-.|+..|.   ++..+++.+.+|+.++.+++.++.+.+.++...        ...++.++..|+.+.-      
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g--------~~~~v~~~~~d~~~~~------  117 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYG--------LSPRMRAVQGTAPAAL------  117 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--------CTTTEEEEESCTTGGG------
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC--------CCCCEEEEeCchhhhc------
Confidence            46789999887653   334445558899999999998888877776541        1226889999987521      


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEE
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~  136 (222)
                          .....+|+++.+.+.    +.. +.+.+...+++.|.-+.
T Consensus       118 ----~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~  152 (204)
T 3njr_A          118 ----ADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVA  152 (204)
T ss_dssp             ----TTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEE
T ss_pred             ----ccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEE
Confidence                122468999987743    233 66667777777665443

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=94.95  E-value=0.27  Score=38.49  Aligned_cols=102  Identities=14%  Similarity=0.083  Sum_probs=74.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+.++|-.|+..|.   ++..|++.+.+|+.++.+++.++...+.+...         ...++.++..|+.+..      
T Consensus        37 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~---------~~~~v~~~~~d~~~l~------   98 (260)
T 1vl5_A           37 GNEEVLDVATGGGH---VANAFAPFVKKVVAFDLTEDILKVARAFIEGN---------GHQQVEYVQGDAEQMP------   98 (260)
T ss_dssp             SCCEEEEETCTTCH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT---------TCCSEEEEECCC-CCC------
T ss_pred             CCCEEEEEeCCCCH---HHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc---------CCCceEEEEecHHhCC------
Confidence            56789999988664   55667777789999999999888777766553         2236888899987642      


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEE
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~  136 (222)
                        .  ..+.+|+++++.....+.+...+.+.+.+-+++.|.-+.
T Consensus        99 --~--~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~  138 (260)
T 1vl5_A           99 --F--TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLL  138 (260)
T ss_dssp             --S--CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred             --C--CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEE
Confidence              0  114789999998877776677788888888877665444

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=94.94  E-value=0.75  Score=34.48  Aligned_cols=99  Identities=7%  Similarity=-0.046  Sum_probs=65.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+.++|-.|+..|.   ++..+++.+  .+|+.++.+++.++.+.+.+...         +-.++.++..|+.+..    
T Consensus        40 ~~~~vLDiG~G~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~---------~~~~v~~~~~d~~~~~----  103 (204)
T 3e05_A           40 DDLVMWDIGAGSAS---VSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF---------VARNVTLVEAFAPEGL----  103 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH---------TCTTEEEEECCTTTTC----
T ss_pred             CCCEEEEECCCCCH---HHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh---------CCCcEEEEeCChhhhh----
Confidence            46789989988654   333444444  69999999999988888777654         2246888888875431    


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEE
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~  136 (222)
                            ...+.+|+++.+....   ....+.+.+..-+++.|.-+.
T Consensus       104 ------~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~  140 (204)
T 3e05_A          104 ------DDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVL  140 (204)
T ss_dssp             ------TTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEE
T ss_pred             ------hcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEE
Confidence                  1124688888876543   345566666666766665443

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=94.94  E-value=0.28  Score=40.82  Aligned_cols=109  Identities=17%  Similarity=0.113  Sum_probs=65.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-------EEEEEeCCh--hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-------KVIMACRDV--EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDL   82 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~   82 (222)
                      ++.-++.|+||+|+||+.++..|+....       .+.|++.++  +.++-...++....       .+...-.....| 
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~-------~~~~~~~~~~~~-   93 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA-------FPLLDKVVVTAD-   93 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT-------CTTEEEEEEESC-
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC-------ccCCCcEEEcCC-
Confidence            4556899999999999999999987542       799999865  34555555565431       011111222222 


Q ss_pred             CChhhHHHHHHHHHhhccceeEEEechhhHH---------hhhHHHHHHHHHhhc---CCCCeEEEEE-eC
Q psy7936          83 ASFKSIRDCAQDINQTEANVHILINNAVYCI---------LSNNILFYSILFYAI---PGKNVNVYAV-HP  140 (222)
Q Consensus        83 ~~~~~v~~~~~~i~~~~~~id~li~~ag~~~---------l~~~~~~~~~la~~~---~~~gI~v~~v-~P  140 (222)
                           ...       .+..-|++|..||...         +..+...++.++..+   +.+++.|..| +|
T Consensus        94 -----~~~-------a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           94 -----PRV-------AFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             -----HHH-------HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             -----hHH-------HhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence                 111       1235699999998765         222555555555443   3356666655 44

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=94.82  E-value=0.046  Score=45.90  Aligned_cols=101  Identities=10%  Similarity=0.050  Sum_probs=60.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      |+..++.|.||+|.+|+.+++.|.+++. +++.+.+......++.......         .+ .+   ..|+.-.+    
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~---------~~-~v---~~dl~~~~----   76 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHL---------RA-QK---LPTLVSVK----   76 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGG---------TT-SC---CCCCBCGG----
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchh---------cC-cc---cccceecc----
Confidence            3445799999999999999999999875 7776654432222221111110         01 11   12332211    


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeCCc
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGI  142 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~PG~  142 (222)
                           .+.+..+|++|.+.|       ...++..+..+ +.|++|..++.-+
T Consensus        77 -----~~~~~~vDvVf~atp-------~~~s~~~a~~~-~aG~~VId~sa~~  115 (359)
T 1xyg_A           77 -----DADFSTVDAVFCCLP-------HGTTQEIIKEL-PTALKIVDLSADF  115 (359)
T ss_dssp             -----GCCGGGCSEEEECCC-------TTTHHHHHHTS-CTTCEEEECSSTT
T ss_pred             -----hhHhcCCCEEEEcCC-------chhHHHHHHHH-hCCCEEEECCccc
Confidence                 112246899999997       33456677777 8899887776544

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=94.82  E-value=0.063  Score=44.49  Aligned_cols=44  Identities=18%  Similarity=0.062  Sum_probs=36.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIR   59 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~   59 (222)
                      .++.|.|| |.+|..+|..|+..|. +|++++++++.++.....+.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~   54 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLS   54 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHH
Confidence            46889998 9999999999999998 99999999987776544443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	222
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	5e-19
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-18
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-18
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	4e-18
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	5e-18
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	6e-18
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	7e-18
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	9e-18
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-17
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	4e-17
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	8e-17
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	9e-17
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-17
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-16
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	7e-16
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	8e-16
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-15
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-15
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-15
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-15
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-15
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-14
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-14
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-14
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-14
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	4e-14
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-14
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	4e-14
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-14
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	6e-14
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-13
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-13
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-13
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-13
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	4e-13
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	4e-08
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	6e-13
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-13
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-12
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-12
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	4e-12
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	6e-12
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	6e-12
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-12
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-11
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	1e-10
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-10
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	1e-10
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	6e-10
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-09
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-09
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-09
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-09
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-08
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-08
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	5e-08
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	1e-07
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-07
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-07
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-07
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-07
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	4e-07
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	9e-07
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-06
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-06
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-06
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	7e-06
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	2e-05
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	6e-04

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.4 bits (198), Expect = 5e-19
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
            R   +  ++TG + GIG   A+ L   G KV+   R V   E  A+E +          
Sbjct: 6   ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECK--------SA 57

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             PG ++  + DL++ + I      I    + V I INNA
Sbjct: 58  GYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNA 97

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 79.2 bits (195), Expect = 2e-18
 Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 7/103 (6%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           R   K  IITG + GIG+ TA      GAKV +  R  E+ E T  +I        +   
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQIL-------AAGV 54

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI 113
               V     D+ +     +           + IL+NNA   I
Sbjct: 55  SEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAI 97

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 79.3 bits (195), Expect = 2e-18
 Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 7/99 (7%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           R   KTVIITG + GIG+ TA      GA V +  R  E+ E T   I K          
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILK-------SGV 54

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +V     D+ +            +    + +L+NNA
Sbjct: 55  SEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNA 93

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 78.1 bits (192), Expect = 4e-18
 Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 19/189 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RLDGK  IITG   GIG   A      GAKV++  R  +  E  A  +            
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV-----------G 51

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPG 130
            P ++   + D +             +    V  L+NNA   +  +     +  +  +  
Sbjct: 52  TPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLA 111

Query: 131 KNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD--- 187
            N++              + M +    GA  +    +  ++  P  GA      A+    
Sbjct: 112 VNLD----GVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGDPSLGAYNASKGAVRIMS 166

Query: 188 EGAAKETGL 196
           + AA +  L
Sbjct: 167 KSAALDCAL 175

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.6 bits (193), Expect = 5e-18
 Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 5/98 (5%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L G+  I+TG  TGIGK   + L  +G+ V++A R +E+ ++ A E++ +         
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANL-----PPT 63

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINN 108
           K   V+  + ++ + + + +  +    T   ++ L+NN
Sbjct: 64  KQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNN 101

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 77.5 bits (190), Expect = 6e-18
 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 8/99 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           R   + V+ITG  +G+G+ TA  L   GAK+ +     E  E + + +         E  
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVL--------ETA 52

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              EVL    D++    +        +    +    NNA
Sbjct: 53  PDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNA 91

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 77.4 bits (190), Expect = 7e-18
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RLDGK  IITG   GIGK  A T    GA V+++  + + A     EI+          +
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ----------Q 57

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             G+    + D+ S + +   A         V IL+NNA
Sbjct: 58  LGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNA 96

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 77.4 bits (190), Expect = 9e-18
 Identities = 35/185 (18%), Positives = 57/185 (30%), Gaps = 8/185 (4%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           R  GK+VIITG + GIG+  A      GA+V +  R+ ++ E T  +I K          
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILK-------AGV 53

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPG 130
              ++     D+       D           + IL+NNA   +          +      
Sbjct: 54  PAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKT 113

Query: 131 KNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA 190
             +N  AV     KT+              ++               A+  L        
Sbjct: 114 FKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALD-QYTRCT 172

Query: 191 AKETG 195
           A +  
Sbjct: 173 AIDLI 177

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 76.6 bits (188), Expect = 1e-17
 Identities = 21/98 (21%), Positives = 49/98 (50%), Gaps = 9/98 (9%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L G+  ++TG + G+G   AQ L   G  V++A R++E+A   A ++ +         K 
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE---------KY 53

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
             E +  + D+++++ ++   + + +    +  ++N A
Sbjct: 54  GVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAA 91

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.2 bits (184), Expect = 4e-17
 Identities = 25/195 (12%), Positives = 55/195 (28%), Gaps = 19/195 (9%)

Query: 9   ASRLDGKTVIITGCNTGIGKVTAQTLYGI---GAKVIMACRDVEKAETTASEIRKHFEVA 65
           A  L     ++TG + G G+  A  L  +   G+ ++++ R          E+       
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELG------ 54

Query: 66  TSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEAN----VHILINNAVYCILSNNILFY 121
               +   +V++   DL +   ++     + +          +LINNA      +     
Sbjct: 55  --AQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLN 112

Query: 122 SILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTT 181
                 +      +       + +       D+       +    +         G    
Sbjct: 113 VNDLAEV-NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCA 171

Query: 182 LHCALD---EGAAKE 193
              A D   +  A E
Sbjct: 172 GKAARDMLYQVLAAE 186

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 74.7 bits (183), Expect = 8e-17
 Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 11/129 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL  K  IITG   GIG+ TA+     GAKV++A    +  +   + I            
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI-----------G 51

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPG 130
            P  +     D+   + +R+           + I+  N      +   +  +        
Sbjct: 52  SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRV 111

Query: 131 KNVNVYAVH 139
            ++NVY   
Sbjct: 112 MDINVYGAF 120

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 74.3 bits (182), Expect = 9e-17
 Identities = 28/185 (15%), Positives = 54/185 (29%), Gaps = 16/185 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL GK  +++G   G+G    + +   GAKV+      E+ +  A+E+            
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL------------ 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPG 130
                    LD+      +            +H+L+NNA    +     +    +  I  
Sbjct: 51  -ADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILD 109

Query: 131 KNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA 190
            N          ++  +    +              +   +      A       L +  
Sbjct: 110 VN---LTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKST 166

Query: 191 AKETG 195
           A E G
Sbjct: 167 ALELG 171

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 9e-17
 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 8/100 (8%)

Query: 13  DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKP 72
           +GK  ++TG   GIG+  A+ L   GAKV +   ++E      + + + FE        P
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE--------P 53

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC 112
            + L  + D+A  + +RD  + +      + IL+NNA   
Sbjct: 54  QKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN 93

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (180), Expect = 2e-16
 Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 15/130 (11%)

Query: 10  SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           +R  GK V++TG   GIG    +     GA+V++  +D         E+           
Sbjct: 2   TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----------- 50

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIP 129
                 +    D+     ++    +  +    +  ++NNA +          S   +   
Sbjct: 51  ---PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQ- 106

Query: 130 GKNVNVYAVH 139
              +N+   +
Sbjct: 107 LLELNLLGTY 116

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 71.9 bits (176), Expect = 7e-16
 Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 13/99 (13%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL GK  ++TG  +G+G    + L G GAKV  +  +    +  A+E+            
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL------------ 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                +  + D++S          + +    +++L+NNA
Sbjct: 51  -GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNA 88

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 8e-16
 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 9/102 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
              GK   ITG  TG+GK     L  +GA+ ++A R ++  + TA +I           +
Sbjct: 22  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISS---------Q 72

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC 112
              +V   + D+     +++   ++ +   + +I+INNA   
Sbjct: 73  TGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGN 114

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 71.1 bits (174), Expect = 1e-15
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 12/99 (12%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL  K  +ITG   GIG+  A+     GA + +A      A    + IR           
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAIRNL--------- 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
               VL  K D++    +    + +  T     IL+NNA
Sbjct: 51  -GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNA 88

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 71.6 bits (175), Expect = 1e-15
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 11/99 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L  KTV++TG   GIG    +   G GA +    R+  +     S+ +          KK
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQ----------KK 55

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQT-EANVHILINNA 109
             +V     D +         Q ++      + ILINN 
Sbjct: 56  GFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNL 94

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.4 bits (172), Expect = 2e-15
 Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 12/128 (9%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            + G+ V+ITG   GIG++TA     + +K+++   +    E TA++ +           
Sbjct: 4   SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--------- 54

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPG 130
              +V    +D ++ + I   A+ +     +V IL+NNA     S+              
Sbjct: 55  -GAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKT-- 111

Query: 131 KNVNVYAV 138
             VNV A 
Sbjct: 112 FEVNVLAH 119

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 70.0 bits (171), Expect = 3e-15
 Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 15/99 (15%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL  K V+ITG   GIG+ T +     GA+++    +       A  +  H  V      
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVM----- 56

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                     D+A   S+     +       +  +++ A
Sbjct: 57  ----------DVADPASVERGFAEALAHLGRLDGVVHYA 85

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 69.7 bits (170), Expect = 4e-15
 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
               KT+I+TG N GIG    + +   GA V +  R    A     ++ K F        
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-------- 57

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +    + D+++   +    Q I+     +  LI NA
Sbjct: 58  -GVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANA 95

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 68.7 bits (167), Expect = 1e-14
 Identities = 42/182 (23%), Positives = 68/182 (37%), Gaps = 19/182 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RLDGKT +ITG   GIG+  A+     GA+V +A  ++E A  TA+EI            
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI------------ 49

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPG 130
                    LD+    SI  C  ++     ++ IL+NNA    L+  +      +  +  
Sbjct: 50  -GPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFA 108

Query: 131 KNV-----NVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMW-WWMKTPEQGAQTTLHC 184
            NV      + AV   ++    G  + +      R    ++      K        +   
Sbjct: 109 INVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGL 168

Query: 185 AL 186
            L
Sbjct: 169 NL 170

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 68.7 bits (167), Expect = 1e-14
 Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 10/102 (9%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           + +GK  ++TG    IG  TA  L   G  + +   + E  E   + +R          +
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVR----------E 51

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC 112
           K  E      D+ S +++      + +    +  L NNA Y 
Sbjct: 52  KGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQ 93

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 67.8 bits (165), Expect = 2e-14
 Identities = 30/186 (16%), Positives = 54/186 (29%), Gaps = 17/186 (9%)

Query: 13  DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKP 72
           D +  ++TG  +GIG   A+ L   G +V +  R  E   TT  E+R+            
Sbjct: 1   DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG---------- 50

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKN 132
            E   +  D+ S   I      + +    V +L+NNA            + L   +    
Sbjct: 51  VEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDV 106

Query: 133 VNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD---EG 189
           V         V  ++ +          R +                 +     +    + 
Sbjct: 107 VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKA 166

Query: 190 AAKETG 195
              E  
Sbjct: 167 LGLELA 172

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 67.3 bits (164), Expect = 3e-14
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 11/99 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L+G T ++TG + GIG    + L  +GA V    R+ ++     ++ R           K
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR----------SK 55

Query: 72  PGEVLIKKLDLASFKSIRDCAQDI-NQTEANVHILINNA 109
             +V     DL+S    ++    + N     ++IL+NNA
Sbjct: 56  GFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNA 94

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 67.0 bits (163), Expect = 4e-14
 Identities = 24/176 (13%), Positives = 51/176 (28%), Gaps = 15/176 (8%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           RL GKT+++TG  +GIG+         GA ++   R+        + +            
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----------- 50

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPG 130
              E +    D++  K++     +  +    +H + + A     + +       +  +  
Sbjct: 51  --AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVL- 107

Query: 131 KNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL 186
             VN+        K         +        G            +     L   L
Sbjct: 108 -RVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTL 162

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 66.8 bits (163), Expect = 4e-14
 Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 16/99 (16%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
              GK V++TG   GIG+  AQ     GA V +     E  E   +     F+V      
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQV------ 55

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                     DL   +      ++       V +L+NNA
Sbjct: 56  ----------DLEDERERVRFVEEAAYALGRVDVLVNNA 84

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 66.9 bits (163), Expect = 4e-14
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 13/101 (12%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L GKTVIITG   G+G   A+     GA+V++A    E+   TA E+             
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------------- 49

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC 112
                 + LD+   +  +       +   +V  L+NNA   
Sbjct: 50  GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIS 90

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 66.7 bits (162), Expect = 5e-14
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 11/103 (10%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           L G T ++TG + GIG    + L G+GA+V    R+ ++ +      R          +K
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR----------EK 53

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQT-EANVHILINNAVYCI 113
              V     DL S        Q +    +  ++IL+NNA   I
Sbjct: 54  GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI 96

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 66.7 bits (162), Expect = 6e-14
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 11/98 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-KAETTASEIRKHFEVATSEDK 70
           L+GK V+ITG +TG+GK  A       AKV++  R  E +A +   EI+K          
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--------- 55

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINN 108
             GE +  K D+     + +  Q   +    + ++INN
Sbjct: 56  -GGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINN 92

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.8 bits (160), Expect = 1e-13
 Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 18/99 (18%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
              G   ++TG   GIG+ T + L+  GAKV+   R      + A E      V      
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVC----- 56

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                    +DL  + +       I      V +L+NNA
Sbjct: 57  ---------VDLGDWDATEKALGGIGP----VDLLVNNA 82

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 65.4 bits (159), Expect = 2e-13
 Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 16/132 (12%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           +L G+ V+ITG  +G+G+         GAKV +  +  E+     ++             
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH------------ 49

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPG 130
               VL    D+ S +  +  A         +  LI NA     S  ++           
Sbjct: 50  -GDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAF 108

Query: 131 K---NVNVYAVH 139
               ++NV    
Sbjct: 109 DEVFHINVKGYI 120

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 64.6 bits (157), Expect = 3e-13
 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 10/102 (9%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
             + K  ++TG   GIG+  A+ L    + VI   R  +  ++   EI+           
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--------- 57

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC 112
              E      D++  + I +    I     NV IL+NNA   
Sbjct: 58  -GYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT 98

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 64.4 bits (156), Expect = 4e-13
 Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 15/181 (8%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVATSEDK 70
           L GK  ++TG  +GIG   A  L   GA +++    D  + E   + +           +
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAA---------Q 52

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPG 130
              +VL    DL+  +++R    +  +    + IL+NNA     +    F +  + AI  
Sbjct: 53  HGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILA 112

Query: 131 KNV-----NVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA 185
            N+        A  P + K   GR ++     G         +   K    G        
Sbjct: 113 LNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALE 172

Query: 186 L 186
            
Sbjct: 173 T 173

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 4e-13
 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 12/98 (12%)

Query: 14  GKTV-IITGCNTGIGKVTAQTLYG-IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
           G  V ++TG N GIG    + L       V++  RDV + +    +++            
Sbjct: 2   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--------- 52

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                  +LD+   +SIR     + +    + +L+NNA
Sbjct: 53  -LSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNA 89

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 4e-08
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 19/74 (25%)

Query: 131 KNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCA-LDEG 189
             + + A  PG V+T++                        K+PE+GA+T ++ A L   
Sbjct: 217 DKILLNACCPGWVRTDMAG------------------PKATKSPEEGAETPVYLALLPPD 258

Query: 190 AAKETGLYYSDYKV 203
           A    G + S+ +V
Sbjct: 259 AEGPHGQFVSEKRV 272

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 63.7 bits (154), Expect = 6e-13
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 10/98 (10%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
           K  ++TG   GIGK  A  L   G  V +A  +   A+  ASEI           +  G 
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN----------QAGGH 51

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC 112
            +  K+D++    +    +   +T     +++NNA   
Sbjct: 52  AVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVA 89

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 64.0 bits (155), Expect = 6e-13
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 11/102 (10%)

Query: 8   SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVAT 66
            ++ L+GK  ++TG   GIG+  A  L   G KVI+   +  E AE   + I+K+     
Sbjct: 12  QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN----- 66

Query: 67  SEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINN 108
                  +    K ++   + I    ++  +    + I+ +N
Sbjct: 67  -----GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSN 103

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 63.0 bits (152), Expect = 1e-12
 Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 26/211 (12%)

Query: 14  GKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
             +V++TG N GIG    Q L        +I   RDVEKA    S              K
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-------------K 49

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQT--EANVHILINNAVYCILSNNILFYSILFYAIP 129
              V +  L +   KS+      + +      + +LINNA   +        +    A  
Sbjct: 50  DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIA-- 107

Query: 130 GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG 189
            + ++V      ++  +L   + +     ++  G  L           +          G
Sbjct: 108 -EQLDVNTTSVVLLTQKLLPLLKNA---ASKESGDQLSVSRAAVITISSGLGSITDNTSG 163

Query: 190 AAKETGLYYSDYKVAK---SRNFPFELKGKG 217
           +A+   L Y   K A     R    +LK   
Sbjct: 164 SAQFPVLAYRMSKAAINMFGRTLAVDLKDDN 194

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 62.8 bits (152), Expect = 2e-12
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 11/98 (11%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDK 70
           L GK  + TG   GIG+  A  L   GA V++      + AE   +E++K          
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--------- 54

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINN 108
              + +  + D++    +             +  +++N
Sbjct: 55  -GAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSN 91

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 61.2 bits (148), Expect = 4e-12
 Identities = 20/99 (20%), Positives = 29/99 (29%), Gaps = 10/99 (10%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L  K VI      GIG  T++ L     K  +    VE     A     + +       
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPK------- 54

Query: 71  KPGEVLIKKLDLA-SFKSIRDCAQDINQTEANVHILINN 108
               +     D+       +   + I      V ILIN 
Sbjct: 55  --VNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILING 91

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 6e-12
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 18/98 (18%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
            L G+ V++TG   GIG+ T Q L+  GA+V+   R     ++   E      V      
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVC----- 58

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINN 108
                    +DL  +++       +      V +L+NN
Sbjct: 59  ---------VDLGDWEATERALGSVGP----VDLLVNN 83

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 60.8 bits (147), Expect = 6e-12
 Identities = 13/94 (13%), Positives = 28/94 (29%), Gaps = 16/94 (17%)

Query: 16  TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEV 75
           T I+T      G  +A  L   G  V       ++ +   +    +              
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYP------------- 48

Query: 76  LIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
              +L   S +   +  + +      V +L++N 
Sbjct: 49  ---QLKPMSEQEPAELIEAVTSAYGQVDVLVSND 79

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 60.5 bits (146), Expect = 7e-12
 Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 18/145 (12%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
            +GK  ++TG + GIG+  A+TL   GAKVI        A+  +  +  + +        
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGL------ 55

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGK 131
                   L++    SI    + I      V IL+NNA     +  +      +  I   
Sbjct: 56  -------MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIET 108

Query: 132 NVNVY-----AVHPGIVKTELGRYM 151
           N++       AV   ++K   GR +
Sbjct: 109 NLSSVFRLSKAVMRAMMKKRHGRII 133

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 2e-11
 Identities = 18/50 (36%), Positives = 26/50 (52%)

Query: 11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK 60
           L GK VI+TG + GIG+  A  L  +GA V++  R  E  +   S   +
Sbjct: 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE 60

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.7 bits (139), Expect = 1e-10
 Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 4/99 (4%)

Query: 11  RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           R DG+ V++TG   G+G+  A      GA V++     +                   ++
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSS----AADKVVEE 59

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNA 109
                     +  S ++     +    T   + +++NNA
Sbjct: 60  IRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNA 98

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 1e-10
 Identities = 19/61 (31%), Positives = 24/61 (39%)

Query: 10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           RLDGK +I+T    GIG+  A      GAKVI    +  K +           V     
Sbjct: 2  GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTK 61

Query: 70 K 70
          K
Sbjct: 62 K 62

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 56.7 bits (136), Expect = 1e-10
 Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 21/101 (20%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKK 71
              ++V++TG N GIG   AQ L   G KV +  R     +                   
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------------- 45

Query: 72  PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC 112
              +   ++D+    ++      + + +  V +L++NA   
Sbjct: 46  --GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS 84

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 6e-10
 Identities = 14/52 (26%), Positives = 24/52 (46%)

Query: 11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHF 62
           + G   +ITG  +G+G  TA+ L G GA  ++        E  A ++  + 
Sbjct: 2  SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNC 53

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 53.6 bits (128), Expect = 2e-09
 Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 19/131 (14%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAK-------VIMACRDVEKAETTASEIRKHFEVATS 67
             ++ITG   GIG+  A                ++++ R     E  + E R        
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR-------- 53

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYA 127
              +         D++    +R     I +   ++  L+NNA         L        
Sbjct: 54  --AEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA--LSDLTEEDF 109

Query: 128 IPGKNVNVYAV 138
               N N+   
Sbjct: 110 DYTMNTNLKGT 120

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 54.1 bits (129), Expect = 2e-09
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 14/99 (14%)

Query: 16  TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-AETTASEIRKHFEVATSEDKKPGE 74
             +ITG    IG   A  L+  G +V++  R  E  A+   +E+            + G 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNA---------ARAGS 53

Query: 75  VLIKKLDLASFKSIRDCAQDINQTEAN----VHILINNA 109
            ++ K DL+   S+ DC +DI            +L+NNA
Sbjct: 54  AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNA 92

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 53.2 bits (126), Expect = 3e-09
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 15 KTVIITGCNTGIGKVTAQTLYGI---GAKVIMACRDVEKAETTASEIRKHFEV 64
           +++ITGCN G+G    + L  +      +   CR+ E+A+      + H  +
Sbjct: 3  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNI 55

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 52.7 bits (126), Expect = 4e-09
 Identities = 35/221 (15%), Positives = 69/221 (31%), Gaps = 48/221 (21%)

Query: 12  LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE-----IRKHFEVAT 66
           +  K V++   + GIG+  A  L   GA+V +  R+ E  + +        +RK  ++  
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLF 61

Query: 67  SEDKKPG----------------------EVLIKKLDLASFKSIRDCAQDINQTEANVHI 104
            + K+                        +  I  L L   K +R+    + +      +
Sbjct: 62  EKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIV 121

Query: 105 LINNAVYCILSNNILFYSILFYAIPG-----------KNVNVYAVHPGIVKTELGRYMDD 153
            I +        N+   +    A+ G             + V  V PG  +TE  + +  
Sbjct: 122 AITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS 181

Query: 154 TYFPGART----LGRVLMWWWMKTPEQGAQTTLHCALDEGA 190
                       + R      M  PE+ A        ++ +
Sbjct: 182 EEKKKQVESQIPMRR------MAKPEEIASVVAFLCSEKAS 216

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.4 bits (122), Expect = 1e-08
 Identities = 10/102 (9%), Positives = 28/102 (27%), Gaps = 22/102 (21%)

Query: 13  DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKP 72
           + + V++ G    +G    Q        V                          E+++ 
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV--------------------ENEEA 40

Query: 73  GEVLIKKLDLASFKSIRDCAQDINQTEAN--VHILINNAVYC 112
              +I K+  +  +       ++ +   +  V  ++  A   
Sbjct: 41  SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGW 82

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 51.3 bits (122), Expect = 1e-08
 Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 16/141 (11%)

Query: 15  KTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPG 73
             V++TG + GIGK  A +L   G KV++   R  + AE  + +I  +           G
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY----------GG 51

Query: 74  EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIP---- 129
           + +    D++    +    +        + +++NNA     +  I      +  +     
Sbjct: 52  QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNL 111

Query: 130 -GKNVNVYAVHPGIVKTELGR 149
            G  +   A    ++K   GR
Sbjct: 112 TGVFLCTQAATKIMMKKRKGR 132

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 49.9 bits (118), Expect = 5e-08
 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 13/104 (12%)

Query: 11  RLDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSE 68
            L GK +++TG      I    AQ ++  GA++    ++ +K +    E           
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQ------- 53

Query: 69  DKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC 112
               G  ++ + D+A   SI     ++ +        +++  + 
Sbjct: 54  ---LGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFA 94

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 49.0 bits (115), Expect = 1e-07
 Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 11 RLDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE 57
           LDGK ++++G   ++ I    A+     GA++++   D  +     ++
Sbjct: 3  LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD 51

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 48.7 bits (115), Expect = 1e-07
 Identities = 18/144 (12%), Positives = 39/144 (27%), Gaps = 13/144 (9%)

Query: 12  LDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
           L GK  ++ G      +G   A  L   GA+V ++ +                       
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL-------- 57

Query: 70  KKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIP 129
              G  L+ + D+   + +      + +    +  L++   +         Y        
Sbjct: 58  ---GGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDW 114

Query: 130 GKNVNVYAVHPGIVKTELGRYMDD 153
              + V A     V       + +
Sbjct: 115 LLALEVSAYSLVAVARRAEPLLRE 138

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 48.5 bits (114), Expect = 1e-07
 Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 3/57 (5%)

Query: 11 RLDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVA 65
           L GK  +I G   N  I    AQ+ +  GA +     + E  E     I +     
Sbjct: 2  FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNSP 57

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 47.7 bits (112), Expect = 2e-07
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 9/101 (8%)

Query: 17  VIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVA--------TS 67
            ++TG    +G+  A+ L+  G  V +   R   +A   ++ +      +        ++
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 68  EDKKPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINN 108
               P         +  F    +             +L+NN
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNN 105

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 47.4 bits (111), Expect = 3e-07
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 11 RLDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVA 65
           L GK   I G   + G G   A++L   GA++++            S  R  F+ +
Sbjct: 5  DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS 61

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 47.2 bits (111), Expect = 4e-07
 Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE---TTASEIRKHFEVATSEDKK 71
            ++I+GC TGIG  T + L   G +++       +     +TA   ++      ++  K
Sbjct: 2  SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSK 61

Query: 72 PGEVLIKKLDLASFKSIRDCAQDIN 96
            + L+    L     +      +N
Sbjct: 62 GMDGLVLCAGLGPQTKVLGNVVSVN 86

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 45.9 bits (108), Expect = 9e-07
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE 57
          ++ ++TG  +G+G+  A  L   G +V++     E  +    E
Sbjct: 2  RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVE 44

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 45.8 bits (107), Expect = 1e-06
 Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC----RDVEKAETTASEIRKHF 62
             TV++TG   G+G   A+ L   GA  ++       D + A    +E+    
Sbjct: 8  PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG 61

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 2e-06
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGE 74
            V+ITGC++GIG   A  L    ++       +   +T      + +E A +    PG 
Sbjct: 3  TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQG----RLWEAARALACPPGS 58

Query: 75 VLIKKLDLASFKSIRDC 91
          +   +LD+   KS+   
Sbjct: 59 LETLQLDVRDSKSVAAA 75

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 44.1 bits (103), Expect = 3e-06
 Identities = 7/56 (12%), Positives = 14/56 (25%)

Query: 14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED 69
             VI+ G    +G    +     G  V+           +   +  +      E 
Sbjct: 2  SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQ 57

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 43.1 bits (100), Expect = 7e-06
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH 61
          +  ++ G    +GK  A  L  +G ++++  R  EKAE  A+E R+ 
Sbjct: 2  RVALLGG-TGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI 47

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 42.6 bits (98), Expect = 2e-05
 Identities = 14/100 (14%), Positives = 28/100 (28%), Gaps = 2/100 (2%)

Query: 13  DGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK 70
           +     I G     G G   A+ L     K+I             +     F+     DK
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 71  KPGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAV 110
                ++  L   +     +   +  +     ++L N  +
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTI 100

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 37.2 bits (85), Expect = 6e-04
 Identities = 16/55 (29%), Positives = 29/55 (52%)

Query: 11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVA 65
           + GK  ++      +G  +A  L G GA+V++  R ++KA+  A  + K F+V 
Sbjct: 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVN 74

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	222
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.98
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.97
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.97
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.97
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.97
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.97
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.97
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.97
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.97
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.96
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.96
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.96
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.96
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.95
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.95
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.95
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.94
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.94
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.93
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.91
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.83
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.62
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.34
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.15
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.05
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.01
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.99
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.97
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.97
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.96
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.86
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.86
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.86
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.83
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.77
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.71
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.7
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.65
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.6
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.53
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.53
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.53
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.52
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.48
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.47
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.4
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.39
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.31
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.31
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.27
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.22
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.21
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.05
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.94
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.86
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.84
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.79
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.77
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.61
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.6
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	97.57
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.54
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.54
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.54
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.52
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.43
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.38
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.22
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.22
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.17
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.16
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.14
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.13
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.11
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.06
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.99
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.97
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.94
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.89
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.83
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.83
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.83
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.81
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.79
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.78
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.75
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.75
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.72
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.72
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.72
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.67
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.63
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.61
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.5
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.5
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.41
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.4
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.38
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	96.34
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.27
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.23
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.14
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.13
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.05
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.04
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.95
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.83
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.81
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.71
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.67
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.66
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.6
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.56
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	95.53
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.45
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.41
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.36
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.35
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	95.33
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.28
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.26
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	95.22
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.14
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.12
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.06
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.03
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	95.02
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.02
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	95.01
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.0
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	94.92
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.92
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.86
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.72
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.58
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	94.57
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.54
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.49
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.46
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	94.33
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.04
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.01
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.83
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.71
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.68
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	93.49
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	93.44
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	93.35
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.33
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.33
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	93.32
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	93.3
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.29
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	93.18
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.17
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.1
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.05
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.01
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	92.96
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.9
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	92.84
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	92.83
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.79
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	92.78
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	92.73
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	92.7
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.47
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.43
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	92.42
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	92.33
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	92.28
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.19
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.78
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.74
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.58
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.51
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.36
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	91.3
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.28
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	91.23
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	91.22
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.91
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.87
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	90.84
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	90.84
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	90.81
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.56
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	90.49
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	90.42
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.39
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	90.35
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	90.33
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	90.29
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.23
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.03
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	90.03
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	89.6
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	89.42
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	89.41
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	88.91
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	88.78
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	88.63
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	88.63
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	88.39
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	88.36
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	88.33
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	88.29
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	88.13
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	88.06
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	87.91
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.84
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	87.83
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	87.82
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	87.79
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	87.7
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	87.64
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	87.58
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.51
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.44
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	87.29
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	87.22
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	86.85
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	86.85
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	86.79
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.61
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	86.5
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	86.33
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	86.29
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.08
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	85.98
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	85.72
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.54
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	85.24
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.92
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	84.84
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	84.82
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	84.82
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	84.75
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	84.69
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.49
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	84.42
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	84.2
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	83.99
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	83.97
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	83.61
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	83.17
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	83.13
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	83.0
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	82.6
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	82.13
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	81.46
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	81.44
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	81.39
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	81.18
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	81.13
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	81.08
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	81.0
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	80.89
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	80.75
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.71
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	80.65
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	80.42
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	80.41
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	80.04

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.5e-39  Score=260.28  Aligned_cols=189  Identities=20%  Similarity=0.151  Sum_probs=145.0

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++..          +.++.++.||+++.+++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v   72 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK----------GFQVTGSVCDASLRPER   72 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTSHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCceEEEeccCCCHHHH
Confidence            46789999999999999999999999999999999999999999999998774          56899999999999999


Q ss_pred             HHHHHHHHhhc-cceeEEEechhhHHhhh---------------------------------------------------
Q psy7936          89 RDCAQDINQTE-ANVHILINNAVYCILSN---------------------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~-~~id~li~~ag~~~l~~---------------------------------------------------  116 (222)
                      +++++.+.+.+ +++|++|||||+.....                                                   
T Consensus        73 ~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~  152 (259)
T d1xq1a_          73 EKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA  152 (259)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------
T ss_pred             HHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc
Confidence            99999999887 79999999999877110                                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +..|+++||.|++++|||||+|+||+++|+|......++.........|++|  +.+|||+|..+.||
T Consensus       153 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R--~~~pedvA~~v~fL  230 (259)
T d1xq1a_         153 SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGR--FGEPEEVSSLVAFL  230 (259)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGGGHHHHHHH
T ss_pred             cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCC--CcCHHHHHHHHHHH
Confidence                        8999999999999999999999999999999987665554444446678888  89999999999999


Q ss_pred             hcCCCcccccccccccccccccCCCc
Q psy7936         185 ALDEGAAKETGLYYSDYKVAKSRNFP  210 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~~~~~~~~~  210 (222)
                      + ++.+.|+||+.|..++....+.+.
T Consensus       231 ~-S~~s~~iTG~~i~vDGG~s~~g~~  255 (259)
T d1xq1a_         231 C-MPAASYITGQTICVDGGLTVNGFS  255 (259)
T ss_dssp             T-SGGGTTCCSCEEECCCCEEETTEE
T ss_pred             h-CchhcCCcCcEEEeCCCEECCCCC
Confidence            6 567899999999655544444443

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.2e-40  Score=264.94  Aligned_cols=184  Identities=23%  Similarity=0.246  Sum_probs=159.5

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           7 VSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         7 ~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ++.++|+||++|||||++|||+++|++|++.|++|++++|+++.++++.++++..          +.++.+++||+++++
T Consensus         4 ~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~----------g~~~~~~~~Dvs~~~   73 (255)
T d1fmca_           4 SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL----------GGQAFACRCDITSEQ   73 (255)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHH
T ss_pred             CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc----------CCcEEEEEccCCCHH
Confidence            3456789999999999999999999999999999999999999999999999874          668999999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh---------------hh-----------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL---------------SN-----------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l---------------~~-----------------------------------  116 (222)
                      +++++++.+.+.++++|++|||||+...               +|                                   
T Consensus        74 ~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~  153 (255)
T d1fmca_          74 ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN  153 (255)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC
T ss_pred             HHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc
Confidence            9999999999999999999999997650               00                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +.+|+++||.|++++|||||+|+||+++|+|......++.........|++|  +.+|+|+|+.+.||
T Consensus       154 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R--~g~pedvA~~v~fL  231 (255)
T d1fmca_         154 INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRR--LGQPQDIANAALFL  231 (255)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCS--CBCHHHHHHHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                        8999999999999999999999999999999876654333333334456666  88999999999999


Q ss_pred             hcCCCcccccccccc-cccc
Q psy7936         185 ALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~-~~~~  203 (222)
                      + ++.+.|+||+.|. ++|.
T Consensus       232 ~-S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         232 C-SPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             H-SGGGTTCCSCEEEESTTS
T ss_pred             h-CchhcCCcCCEEEECcCc
Confidence            6 5678999999994 4443

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.5e-39  Score=260.29  Aligned_cols=183  Identities=19%  Similarity=0.183  Sum_probs=157.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.+..         +.++.+++||++++++++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~---------g~~~~~~~~Dv~~~~~v~   71 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY---------GVETMAFRCDVSNYEEVK   71 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---------CCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh---------CCcEEEEEccCCCHHHHH
Confidence            47899999999999999999999999999999999999999999988887653         678999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhh----------------h-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILS----------------N-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~----------------~-------------------------------------  116 (222)
                      ++++++.+++++||+||||||+....                |                                     
T Consensus        72 ~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~  151 (251)
T d1vl8a_          72 KLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP  151 (251)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCc
Confidence            99999999999999999999976500                0                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                 +..|+++|+.|++++|||||+|+||+++|+|....... +.........|++|  +.+|+|+|+.++||
T Consensus       152 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R--~~~pedvA~~v~fL  229 (251)
T d1vl8a_         152 NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGR--TGVPEDLKGVAVFL  229 (251)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSS--CBCGGGGHHHHHHH
T ss_pred             cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCC--CCCHHHHHHHHHHH
Confidence                       89999999999999999999999999999998765432 22223334456777  88999999999999


Q ss_pred             hcCCCccccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~~~  204 (222)
                      + ++++.++||+.|..+|..
T Consensus       230 ~-S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         230 A-SEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             H-SGGGTTCCSCEEEESTTG
T ss_pred             h-CchhCCCcCcEEEeCcCe
Confidence            6 556899999999544443

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.3e-39  Score=259.80  Aligned_cols=183  Identities=21%  Similarity=0.212  Sum_probs=154.4

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936           8 SASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus         8 ~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .++.|++|++|||||++|||+++|+.|+++|++|++++|+++.++++.++++..          +.++.++++|+++.++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~----------g~~~~~~~~Dvt~~~~   73 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF----------GYESSGYAGDVSKKEE   73 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT----------TCCEEEEECCTTCHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHH
Confidence            457889999999999999999999999999999999999999999999999764          6689999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHhh----------------h-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCILS----------------N-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l~----------------~-----------------------------------  116 (222)
                      ++++++++.+.++++|+||||||.....                |                                   
T Consensus        74 v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~  153 (251)
T d2c07a1          74 ISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN  153 (251)
T ss_dssp             HHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC
T ss_pred             HHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC
Confidence            9999999999999999999999886600                0                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +.+|+++||.|++++|||||+|+||+++|+|.....+. .........|++|  +.+|+|+|..+.||
T Consensus       154 ~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~-~~~~~~~~~pl~R--~~~pedvA~~v~fL  230 (251)
T d2c07a1         154 VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ-IKKNIISNIPAGR--MGTPEEVANLACFL  230 (251)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH-HHHHHHTTCTTSS--CBCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHH-HHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                        89999999999999999999999999999998876432 2222224456777  88999999999999


Q ss_pred             hcCCCccccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~~~  204 (222)
                      + ++++.|+||+.|..+|..
T Consensus       231 ~-S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         231 S-SDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             H-SGGGTTCCSCEEEESTTS
T ss_pred             h-CchhCCCcCcEEEECCCc
Confidence            6 556889999999554443

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.3e-38  Score=258.02  Aligned_cols=184  Identities=22%  Similarity=0.205  Sum_probs=156.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++..          +.++.+++||+++++++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~----------g~~~~~~~~Dv~~~~~v   72 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK----------GFKVEASVCDLSSRSER   72 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCEEEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCCceEEEeeCCCHHHH
Confidence            36799999999999999999999999999999999999999999999998774          67899999999999999


Q ss_pred             HHHHHHHHhhcc-ceeEEEechhhHHhh----------------h-----------------------------------
Q psy7936          89 RDCAQDINQTEA-NVHILINNAVYCILS----------------N-----------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~-~id~li~~ag~~~l~----------------~-----------------------------------  116 (222)
                      +++++.+.+.++ ++|++|||||+....                |                                   
T Consensus        73 ~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~  152 (259)
T d2ae2a_          73 QELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV  152 (259)
T ss_dssp             HHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc
Confidence            999999988876 899999999976600                0                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC----CcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY----FPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                  +..|+++||.|++++|||||+|+||+|+|+|.+......    .........|++|  +.+|+|+|+.
T Consensus       153 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R--~g~pedvA~~  230 (259)
T d2ae2a_         153 PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRR--MGEPKELAAM  230 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCS--CBCHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCC--CcCHHHHHHH
Confidence                        899999999999999999999999999999986544321    1112223356666  8899999999


Q ss_pred             HHHHhcCCCccccccccc-ccccccc
Q psy7936         181 TLHCALDEGAAKETGLYY-SDYKVAK  205 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i-~~~~~~~  205 (222)
                      ++||+ ++.+.|+||+.| .++|...
T Consensus       231 v~fL~-S~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         231 VAFLC-FPAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             HHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHh-CchhCCCcCcEEEECCCeEe
Confidence            99996 556889999999 5555544

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.4e-38  Score=257.98  Aligned_cols=181  Identities=23%  Similarity=0.238  Sum_probs=156.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++++||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++.+..         +.++.+++||++++++++
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~---------g~~~~~~~~Dv~~~~~v~   75 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF---------GVKTKAYQCDVSNTDIVT   75 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH---------TCCEEEEECCTTCHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh---------CCceEEEEccCCCHHHHH
Confidence            46899999999999999999999999999999999999999999888886653         678999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh----------------hh-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL----------------SN-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l----------------~~-------------------------------------  116 (222)
                      ++++++.+.++++|+||||||+...                +|                                     
T Consensus        76 ~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~  155 (260)
T d1h5qa_          76 KTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ  155 (260)
T ss_dssp             HHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCE
T ss_pred             HHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccc
Confidence            9999999999999999999987650                00                                     


Q ss_pred             ------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHH
Q psy7936         117 ------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGA  178 (222)
Q Consensus       117 ------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a  178 (222)
                                        +..+++.||.|++++|||||+|+||+++|+|.....+. .........|++|  +.+|+|+|
T Consensus       156 ~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~-~~~~~~~~~pl~R--~g~pedvA  232 (260)
T d1h5qa_         156 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK-IRDHQASNIPLNR--FAQPEEMT  232 (260)
T ss_dssp             EETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH-HHHHHHHTCTTSS--CBCGGGGH
T ss_pred             cccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHH-HHHHHHhcCCCCC--CcCHHHHH
Confidence                              89999999999999999999999999999998876432 2222224456776  88999999


Q ss_pred             HHHHHHhcCCCcccccccccc-cccc
Q psy7936         179 QTTLHCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       179 ~~i~~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      +.+.||+ ++++.|+||+.|. |+|.
T Consensus       233 ~~v~fL~-S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         233 GQAILLL-SDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             HHHHHHH-SGGGTTCCSCEEEECTTG
T ss_pred             HHHHHHh-cchhCCCcCceEEECCCe
Confidence            9999996 5678899999994 5554

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.9e-38  Score=255.80  Aligned_cols=178  Identities=24%  Similarity=0.203  Sum_probs=152.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++..          +.++.++++|+++++++++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~----------g~~~~~~~~Dvs~~~~v~~~~   70 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA----------GVEADGRTCDVRSVPEIEALV   70 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEeecCCHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999764          678999999999999999999


Q ss_pred             HHHHhhccceeEEEechhhHHhh----------------h----------------------------------------
Q psy7936          93 QDINQTEANVHILINNAVYCILS----------------N----------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~----------------~----------------------------------------  116 (222)
                      +.+.+++++||+||||||+....                |                                        
T Consensus        71 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~  150 (257)
T d2rhca1          71 AAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA  150 (257)
T ss_dssp             HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccc
Confidence            99999999999999999986600                0                                        


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC----------CCCcchhhhHHHHHHHhcCChHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD----------TYFPGARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~p~e~  177 (222)
                               +.+|+++||.|++++|||||+|+||+++|+|......          ++.........|++|  +.+|+|+
T Consensus       151 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR--~~~pedi  228 (257)
T d2rhca1         151 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGR--YVQPSEV  228 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSS--CBCHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCC--CcCHHHH
Confidence                     8999999999999999999999999999999765321          111122223456666  8899999


Q ss_pred             HHHHHHHhcCCCccccccccc-ccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYY-SDYKV  203 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i-~~~~~  203 (222)
                      |+.+.||| ++.+.++||+.| .++|.
T Consensus       229 a~~v~fL~-S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         229 AEMVAYLI-GPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             HHHHHHHT-SGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHh-CchhcCCcCceEEECcCc
Confidence            99999996 567889999999 45554

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.5e-38  Score=257.92  Aligned_cols=187  Identities=25%  Similarity=0.262  Sum_probs=157.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+. +.++++.++++..          +.++.+++||+++++++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~----------g~~~~~~~~Dvt~~~~v   72 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV----------GGEAIAVKGDVTVESDV   72 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCEEEEEECCTTSHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHH
Confidence            468999999999999999999999999999999999985 5688888888764          67899999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHhh----------------h------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCILS----------------N------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l~----------------~------------------------------------  116 (222)
                      +++++++.+++++||+||||||+....                |                                    
T Consensus        73 ~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~  152 (261)
T d1geea_          73 INLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW  152 (261)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC
Confidence            999999999999999999999987600                0                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..|+++||.|++++|||||+|+||+++|+|....... +.........|++|  +.+|+|+|+.+.|
T Consensus       153 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R--~~~pediA~~v~f  230 (261)
T d1geea_         153 PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGY--IGEPEEIAAVAAW  230 (261)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSS--CBCHHHHHHHHHH
T ss_pred             ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCC--CCCHHHHHHHHHH
Confidence                        89999999999999999999999999999998654322 22222224456777  8899999999999


Q ss_pred             HhcCCCccccccccc-ccccccccCCC
Q psy7936         184 CALDEGAAKETGLYY-SDYKVAKSRNF  209 (222)
Q Consensus       184 l~~~~~~~~~~G~~i-~~~~~~~~~~~  209 (222)
                      |+ ++.+.++||+.| .++|...+..+
T Consensus       231 L~-S~~s~~itG~~i~vDGG~sl~p~~  256 (261)
T d1geea_         231 LA-SSEASYVTGITLFADGGMTLYPSF  256 (261)
T ss_dssp             HH-SGGGTTCCSCEEEESTTGGGCGGG
T ss_pred             Hh-CchhcCCcCCeEEECCCeeCCCCC
Confidence            97 567899999999 56666655443

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.5e-38  Score=253.98  Aligned_cols=175  Identities=18%  Similarity=0.161  Sum_probs=148.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++|+||++|||||++|||+++|+.|++.|++|++++|+++.++++.+.+               +..+++||++++++++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~---------------~~~~~~~Dv~~~~~v~   65 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---------------GAHPVVMDVADPASVE   65 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---------------TCEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---------------CCeEEEEecCCHHHHH
Confidence            3588999999999999999999999999999999999999888776543               3457899999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhh----------------h-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILS----------------N-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~----------------~-------------------------------------  116 (222)
                      ++++++.+.++++|+||||||+....                |                                     
T Consensus        66 ~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~  145 (242)
T d1ulsa_          66 RGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQ  145 (242)
T ss_dssp             HHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTC
T ss_pred             HHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCC
Confidence            99999999999999999999987600                0                                     


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..|+++||.|++++|||||+|+||+++|+|.....+. .........|++|  +.+|+|+|+.+.||+ +
T Consensus       146 ~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~-~~~~~~~~~pl~R--~~~pedia~~v~fL~-S  221 (242)
T d1ulsa_         146 ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEK-VREKAIAATPLGR--AGKPLEVAYAALFLL-S  221 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHH-HHHHHHHTCTTCS--CBCHHHHHHHHHHHH-S
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHH-HHHHHHhcCCCCC--CCCHHHHHHHHHHHh-c
Confidence                     89999999999999999999999999999998876432 2222224456666  889999999999996 5


Q ss_pred             CCcccccccccc-cccc
Q psy7936         188 EGAAKETGLYYS-DYKV  203 (222)
Q Consensus       188 ~~~~~~~G~~i~-~~~~  203 (222)
                      +++.|+||+.|. ++|.
T Consensus       222 ~~s~~itG~~i~vDGG~  238 (242)
T d1ulsa_         222 DESSFITGQVLFVDGGR  238 (242)
T ss_dssp             GGGTTCCSCEEEESTTT
T ss_pred             hhhCCCCCcEEEECCCc
Confidence            568899999995 4443

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.4e-38  Score=254.71  Aligned_cols=183  Identities=22%  Similarity=0.158  Sum_probs=148.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++....       +..++.++++|+++.+++++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~-------~~~~~~~~~~Dvt~~~~v~~   74 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV-------SEQNVNSVVADVTTDAGQDE   74 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-------CGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-------CcCceEEEEccCCCHHHHHH
Confidence            47899999999999999999999999999999999999999999999987520       23479999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh--------------------hh----------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL--------------------SN----------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l--------------------~~----------------------------------  116 (222)
                      +++.+.+.++++|+||||||....                    +|                                  
T Consensus        75 ~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~  154 (264)
T d1spxa_          75 ILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA  154 (264)
T ss_dssp             HHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC
T ss_pred             HHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccccc
Confidence            999999999999999999997530                    00                                  


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC-cc-------hhhhHHHHHHHhcCChH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF-PG-------ARTLGRVLMWWWMKTPE  175 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~p~  175 (222)
                                   +.+|+++||.|++++|||||+|+||+++|+|.......+. ..       ......|++|  +.+|+
T Consensus       155 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R--~g~pe  232 (264)
T d1spxa_         155 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGV--MGQPQ  232 (264)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSS--CBCHH
T ss_pred             CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCC--CcCHH
Confidence                         8999999999999999999999999999999876543211 11       1112345666  88999


Q ss_pred             HHHHHHHHHhcCCCccccccccccccc
Q psy7936         176 QGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       176 e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      |+|+.+.||++++.+.|+||+.|..+|
T Consensus       233 dvA~~v~fL~S~~~s~~itG~~i~vDG  259 (264)
T d1spxa_         233 DIAEVIAFLADRKTSSYIIGHQLVVDG  259 (264)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             HHHHHHHHHhCCcccCCccCceEEeCC
Confidence            999999999865667899999995443

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.3e-38  Score=256.42  Aligned_cols=183  Identities=16%  Similarity=0.086  Sum_probs=154.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++....        ++.++.+++||+++++++++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~--------~~~~~~~~~~Dvt~~~~v~~   72 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA--------PDAEVLTTVADVSDEAQVEA   72 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC--------TTCCEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC--------CCCeEEEEeccCCCHHHHHH
Confidence            3789999999999999999999999999999999999999999988887653        46789999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----hh-------------h-------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----LS-------------N-------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----l~-------------~-------------------------------------  116 (222)
                      +++.+.++++++|+||||||+..    +.             |                                     
T Consensus        73 ~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~  152 (258)
T d1iy8a_          73 YVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN  152 (258)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS
T ss_pred             HHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCC
Confidence            99999999999999999999754    00             0                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---CC----cchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---YF----PGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                +.+|+++||.|++++|||||+|+||+++|+|.......   +.    ........|++|  +.+|+|+|+
T Consensus       153 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R--~~~p~dvA~  230 (258)
T d1iy8a_         153 QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKR--YGEAPEIAA  230 (258)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCS--CBCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCC--CcCHHHHHH
Confidence                      89999999999999999999999999999997643211   11    111112345666  789999999


Q ss_pred             HHHHHhcCCCccccccccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYYSDYKVA  204 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~~~~~~  204 (222)
                      .+.||+ ++++.++||+.|..+|..
T Consensus       231 ~v~fL~-S~~s~~itG~~i~VDGG~  254 (258)
T d1iy8a_         231 VVAFLL-SDDASYVNATVVPIDGGQ  254 (258)
T ss_dssp             HHHHHT-SGGGTTCCSCEEEESTTT
T ss_pred             HHHHHh-CchhcCCcCceEEcCcch
Confidence            999996 567899999999544443

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-38  Score=254.08  Aligned_cols=176  Identities=24%  Similarity=0.268  Sum_probs=151.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|+||++|||||++|||+++|+.|++.|++|++++|+++.++++.+++.             .++.++++|+++.+++++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~-------------~~~~~~~~Dv~~~~~v~~   67 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-------------ANGKGLMLNVTDPASIES   67 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-------------GGEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-------------CCCcEEEEEecCHHHhhh
Confidence            5899999999999999999999999999999999999999998887763             366789999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh----------------h--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS----------------N--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~----------------~--------------------------------------  116 (222)
                      +++.+.+.++++|+||||||.....                |                                      
T Consensus        68 ~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~  147 (243)
T d1q7ba_          68 VLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ  147 (243)
T ss_dssp             HHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC
T ss_pred             hhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCC
Confidence            9999999999999999999887600                0                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..|+++||.|++++|||||+|+||+++|+|.....++. ........|++|  +.+|||+|+.+.||+ +
T Consensus       148 ~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~pl~R--~~~pedvA~~v~fL~-S  223 (243)
T d1q7ba_         148 ANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQ-RAGILAQVPAGR--LGGAQEIANAVAFLA-S  223 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHH-HHHHHTTCTTSS--CBCHHHHHHHHHHHH-S
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhH-HHHHHhcCCCCC--CCCHHHHHHHHHHHh-C
Confidence                     899999999999999999999999999999988765432 122223456666  889999999999996 5


Q ss_pred             CCcccccccccc-cccc
Q psy7936         188 EGAAKETGLYYS-DYKV  203 (222)
Q Consensus       188 ~~~~~~~G~~i~-~~~~  203 (222)
                      +.+.++||+.|. ++|.
T Consensus       224 ~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         224 DEAAYITGETLHVNGGM  240 (243)
T ss_dssp             GGGTTCCSCEEEESTTS
T ss_pred             chhcCCcCCeEEECCCe
Confidence            668899999994 4443

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.5e-37  Score=251.88  Aligned_cols=180  Identities=24%  Similarity=0.262  Sum_probs=146.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC-hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      |+||++|||||++|||+++|+.|+++|++|++++|+ .+.++++.+++...         .+.++.+++||+++.+++++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~---------~g~~~~~~~~Dv~~~~~v~~   72 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ---------HGVKVLYDGADLSKGEAVRG   72 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH---------HTSCEEEECCCTTSHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHh---------cCCcEEEEECCCCCHHHHHH
Confidence            689999999999999999999999999999999997 46788888888665         36789999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh----------------h--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS----------------N--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~----------------~--------------------------------------  116 (222)
                      +++++.+.++++|+||||||+....                |                                      
T Consensus        73 ~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~  152 (260)
T d1x1ta1          73 LVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK  152 (260)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCc
Confidence            9999999999999999999987600                0                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-----------CCcchhhhHHHHHHHhcCChHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-----------YFPGARTLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~p~e  176 (222)
                               +.+|+++||.|++++||+||+|+||+++|+|.......           ..........|++|  +.+|+|
T Consensus       153 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R--~g~ped  230 (260)
T d1x1ta1         153 SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ--FVTPEQ  230 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCC--CBCHHH
T ss_pred             chhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCC--CcCHHH
Confidence                     89999999999999999999999999999998754321           01111224456666  889999


Q ss_pred             HHHHHHHHhcCCCcccccccccccccc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +|+.++||| ++.+.|+||+.|..+|.
T Consensus       231 iA~~v~fL~-S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         231 LGGTAVFLA-SDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             HHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHh-ChhhCCCcCCEEEECcc
Confidence            999999997 55689999999954443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-37  Score=253.86  Aligned_cols=188  Identities=20%  Similarity=0.253  Sum_probs=158.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      -.|+||++|||||++|||+++|+.|++.|++|++++|+.++++++.++++....     ...+.++.+++||++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~-----~~~~~~~~~~~~Dvs~~~~v~   82 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP-----PTKQARVIPIQCNIRNEEEVN   82 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSC-----TTCCCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhc-----cccCceEEEEeccCCCHHHHH
Confidence            458999999999999999999999999999999999999999999999876421     113568999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhh----------------h-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILS----------------N-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~----------------~-------------------------------------  116 (222)
                      ++++.+.+.++++|+||||||.....                |                                     
T Consensus        83 ~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~~~  162 (297)
T d1yxma1          83 NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLA  162 (297)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTC
T ss_pred             HHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccccccc
Confidence            99999999999999999999876500                0                                     


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                               +.+|+++||.|++++|||||+|+||+|+|+|.......   ++........|++|  +.+|+|+|..++||
T Consensus       163 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR--~g~pedvA~~v~fL  240 (297)
T d1yxma1         163 VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKR--IGVPEEVSSVVCFL  240 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSS--CBCTHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                     89999999999999999999999999999997654322   23333335567777  89999999999999


Q ss_pred             hcCCCccccccccc-ccccccc
Q psy7936         185 ALDEGAAKETGLYY-SDYKVAK  205 (222)
Q Consensus       185 ~~~~~~~~~~G~~i-~~~~~~~  205 (222)
                      | ++.+.|+||+.| .++|...
T Consensus       241 ~-Sd~s~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         241 L-SPAASFITGQSVDVDGGRSL  261 (297)
T ss_dssp             H-SGGGTTCCSCEEEESTTGGG
T ss_pred             h-CchhcCcCCcEEEeCcChhh
Confidence            7 557899999999 4555444

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.1e-38  Score=256.90  Aligned_cols=187  Identities=24%  Similarity=0.174  Sum_probs=155.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +.|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++++...       .+.++.+++||++++++++
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~-------~~~~~~~~~~Dvs~~~~v~   73 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV-------SEKQVNSVVADVTTEDGQD   73 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-------CGGGEEEEECCTTSHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-------CCCceEEEEccCCCHHHHH
Confidence            358999999999999999999999999999999999999999999999976420       2457999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh--------------------hh---------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL--------------------SN---------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l--------------------~~---------------------------------  116 (222)
                      ++++.+.++++++|++|||||....                    +|                                 
T Consensus        74 ~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~  153 (272)
T d1xkqa_          74 QIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ  153 (272)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS
T ss_pred             HHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc
Confidence            9999999999999999999987540                    00                                 


Q ss_pred             --------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcc--------hhhhHHHHHHHhcCCh
Q psy7936         117 --------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPG--------ARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 --------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~p  174 (222)
                                    +..|+++||.|++++|||||+|+||+|+|+|.......+...        ......|++|  +.+|
T Consensus       154 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR--~g~p  231 (272)
T d1xkqa_         154 AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGA--AGKP  231 (272)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSS--CBCH
T ss_pred             CCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCC--CcCH
Confidence                          899999999999999999999999999999987654321110        1112345666  8899


Q ss_pred             HHHHHHHHHHhcCCCccccccccc-ccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYY-SDYKVAK  205 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i-~~~~~~~  205 (222)
                      +|+|+.+.|||+++.+.|+||+.| .++|...
T Consensus       232 ediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         232 EHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             HHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            999999999986555679999999 5555443

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=5e-38  Score=253.76  Aligned_cols=178  Identities=22%  Similarity=0.202  Sum_probs=150.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++             +.++.+++||+++++++++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~   68 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-------------GDAARYQHLDVTIEEDWQR   68 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------------GGGEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------------CCceEEEEcccCCHHHHHH
Confidence            589999999999999999999999999999999999999887776554             4578899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh----------------h--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS----------------N--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~----------------~--------------------------------------  116 (222)
                      +++.+.++++++|+||||||+....                |                                      
T Consensus        69 ~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~  148 (254)
T d1hdca_          69 VVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT  148 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccch
Confidence            9999999999999999999887600                0                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcC-ChHHHHHHHHHHhc
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMK-TPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~e~a~~i~~l~~  186 (222)
                               +..|+++||.|++++|||||+|+||+++|+|........... .....|++|  +. +|+|+|..++||+ 
T Consensus       149 ~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~-~~~~~pl~R--~g~~PedvA~~v~fL~-  224 (254)
T d1hdca_         149 SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEG-NYPNTPMGR--VGNEPGEIAGAVVKLL-  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTT-SCTTSTTSS--CB-CHHHHHHHHHHHH-
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHH-HHhCCCCCC--CCCCHHHHHHHHHHHh-
Confidence                     899999999999999999999999999999987654432222 224456666  55 6999999999996 


Q ss_pred             CCCcccccccccc-cccccc
Q psy7936         187 DEGAAKETGLYYS-DYKVAK  205 (222)
Q Consensus       187 ~~~~~~~~G~~i~-~~~~~~  205 (222)
                      ++++.|+||+.|. ++|...
T Consensus       225 S~~a~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         225 SDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             chhhCCCCCceEEeCCCccC
Confidence            5678999999995 555443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=5.9e-38  Score=253.12  Aligned_cols=179  Identities=23%  Similarity=0.246  Sum_probs=152.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|++.|++|++++|+.+.++++.+++..           +.++.+++||+++++++++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~   71 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-----------PDQIQFFQHDSSDEDGWTK   71 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-----------TTTEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-----------CCcEEEEEccCCCHHHHHH
Confidence            38999999999999999999999999999999999999999888887743           4578999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh----------------h--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS----------------N--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~----------------~--------------------------------------  116 (222)
                      +++.+.+.++++|+||||||.....                |                                      
T Consensus        72 ~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~  151 (251)
T d1zk4a1          72 LFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS  151 (251)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC
Confidence            9999999999999999999887600                0                                      


Q ss_pred             ----------HHHHHHHHHhh--cCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ----------NILFYSILFYA--IPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ----------~~~~~~~la~~--~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                +.+|++++|.|  ++++|||||+|+||+++|+|.......+.........|++|  +.+|+|+|+.+.||
T Consensus       152 ~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R--~~~pedvA~~v~fL  229 (251)
T d1zk4a1         152 LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGH--IGEPNDIAYICVYL  229 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSS--CBCHHHHHHHHHHH
T ss_pred             chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCC--CcCHHHHHHHHHHH
Confidence                      89999999988  67899999999999999999887654322222224457777  89999999999999


Q ss_pred             hcCCCcccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~~  203 (222)
                      + ++++.|+||+.|..+|.
T Consensus       230 ~-S~~s~~itG~~i~vDGG  247 (251)
T d1zk4a1         230 A-SNESKFATGSEFVVDGG  247 (251)
T ss_dssp             H-SGGGTTCCSCEEEESTT
T ss_pred             h-CchhCCCcCcEEEECcc
Confidence            6 55689999999954443

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=9.7e-38  Score=257.16  Aligned_cols=185  Identities=21%  Similarity=0.196  Sum_probs=154.4

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh
Q psy7936           6 AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF   85 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (222)
                      +++..+|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....         +.++.+++||+++.
T Consensus        17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~---------g~~~~~~~~D~~~~   87 (294)
T d1w6ua_          17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT---------GNKVHAIQCDVRDP   87 (294)
T ss_dssp             CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---------SSCEEEEECCTTCH
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc---------CCceEEEEecccCh
Confidence            455578999999999999999999999999999999999999999999998887763         67889999999999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHHhh----------------h---------------------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCILS----------------N---------------------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~l~----------------~---------------------------------  116 (222)
                      ++++++++.+.+.++++|++|||||.....                |                                 
T Consensus        88 ~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~  167 (294)
T d1w6ua_          88 DMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE  167 (294)
T ss_dssp             HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH
T ss_pred             HHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhh
Confidence            999999999999999999999999976600                0                                 


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC--CCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT--YFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                     +..|++.+|.|++++|||||+|+||+++|++.......  ..........|++|  +.+|+|+|+
T Consensus       168 ~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R--~~~pediA~  245 (294)
T d1w6ua_         168 TGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGR--LGTVEELAN  245 (294)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSS--CBCHHHHHH
T ss_pred             hcccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCC--CCCHHHHHH
Confidence                           89999999999999999999999999999998765432  12222224457777  899999999


Q ss_pred             HHHHHhcCCCcccccccccc-ccc
Q psy7936         180 TTLHCALDEGAAKETGLYYS-DYK  202 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~-~~~  202 (222)
                      .+.||| ++.+.++||+.|. ++|
T Consensus       246 ~v~fL~-sd~s~~itG~~i~vDGG  268 (294)
T d1w6ua_         246 LAAFLC-SDYASWINGAVIKFDGG  268 (294)
T ss_dssp             HHHHHT-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHh-CchhcCCCCcEEEECCC
Confidence            999996 5568899999994 544

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.4e-37  Score=251.63  Aligned_cols=177  Identities=28%  Similarity=0.281  Sum_probs=149.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++             +.++.+++||+++++++++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-------------~~~~~~~~~Dvt~~~~v~~   68 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-------------GPAACAIALDVTDQASIDR   68 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-------------CTTEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------------CCceEEEEeeCCCHHHHHH
Confidence            489999999999999999999999999999999999999988887765             4478899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh----------------h--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS----------------N--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~----------------~--------------------------------------  116 (222)
                      +++++.++++++|+||||||+....                |                                      
T Consensus        69 ~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~  148 (256)
T d1k2wa_          69 CVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL  148 (256)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc
Confidence            9999999999999999999976600                0                                      


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC----------CCcchhhhHHHHHHHhcCChHH
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT----------YFPGARTLGRVLMWWWMKTPEQ  176 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~p~e  176 (222)
                                +..|+++||.|++++|||||+|+||+++|+|.......          +.........|++|  +.+|+|
T Consensus       149 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR--~~~p~e  226 (256)
T d1k2wa_         149 VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGR--MGRAED  226 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSS--CBCHHH
T ss_pred             ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCC--CcCHHH
Confidence                      89999999999999999999999999999997543211          11112223346666  889999


Q ss_pred             HHHHHHHHhcCCCcccccccccccccc
Q psy7936         177 GAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       177 ~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      +|..+.||+ ++++.|+||+.|..+|.
T Consensus       227 vA~~v~fL~-S~~a~~iTG~~i~vDGG  252 (256)
T d1k2wa_         227 LTGMAIFLA-TPEADYIVAQTYNVDGG  252 (256)
T ss_dssp             HHHHHHHTT-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHh-CchhCCccCceEEECcc
Confidence            999999996 56789999999954443

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=2.1e-37  Score=248.40  Aligned_cols=175  Identities=20%  Similarity=0.197  Sum_probs=150.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++             +.++.+++||+++.+++++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dls~~~~i~~   68 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-------------EAEAIAVVADVSDPKAVEA   68 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-------------CSSEEEEECCTTSHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------------CCceEEEEecCCCHHHHHH
Confidence            478999999999999999999999999999999999998876655432             5688999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhh------------------------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSN------------------------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~------------------------------------------------------  116 (222)
                      +++.+.+.++++|++|||||......                                                      
T Consensus        69 ~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~~~Y  148 (241)
T d2a4ka1          69 VFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHY  148 (241)
T ss_dssp             HHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHH
T ss_pred             HHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCcccc
Confidence            99999999999999999998876100                                                      


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                            +..|++.||.|++++|||||+|+||+++|+|....++. .........|++|  +.+|+|+|+++.||+ ++.+
T Consensus       149 ~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~-~~~~~~~~~p~~r--~~~p~dva~~v~fL~-S~~s  224 (241)
T d2a4ka1         149 AAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPW-AWEQEVGASPLGR--AGRPEEVAQAALFLL-SEES  224 (241)
T ss_dssp             HHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHH-HHHHHHHTSTTCS--CBCHHHHHHHHHHHH-SGGG
T ss_pred             chhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHh-HHHHHHhCCCCCC--CcCHHHHHHHHHHHh-cchh
Confidence                  89999999999999999999999999999998866532 2222224466766  889999999999996 6678


Q ss_pred             cccccccccccc
Q psy7936         191 AKETGLYYSDYK  202 (222)
Q Consensus       191 ~~~~G~~i~~~~  202 (222)
                      .++||+.|..++
T Consensus       225 ~~itG~~i~vDG  236 (241)
T d2a4ka1         225 AYITGQALYVDG  236 (241)
T ss_dssp             TTCCSCEEEEST
T ss_pred             CCCcCceEEeCC
Confidence            999999995443

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=5.1e-37  Score=249.87  Aligned_cols=181  Identities=20%  Similarity=0.206  Sum_probs=151.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++..           ...+.+++||+++++++++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~-----------~~~~~~~~~Dv~~~~~v~~   71 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-----------PDVISFVHCDVTKDEDVRN   71 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-----------TTTEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC-----------CCceEEEEccCCCHHHHHH
Confidence            58999999999999999999999999999999999999999999888754           3467889999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh------------------h------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS------------------N------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~------------------~------------------------------------  116 (222)
                      +++++.+.++++|++|||||+....                  |                                    
T Consensus        72 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~  151 (268)
T d2bgka1          72 LVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE  151 (268)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT
T ss_pred             HHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc
Confidence            9999999999999999999975400                  0                                    


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcc--hhh--hHHHHHHHhcCChHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPG--ART--LGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~p~e~a~~  180 (222)
                                  +..|+++||.|++++|||||+|+||+++|+|...........  ...  ...+.+|  +.+|||+|+.
T Consensus       152 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr--~~~pedvA~~  229 (268)
T d2bgka1         152 GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGT--LLRAEDVADA  229 (268)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSC--CCCHHHHHHH
T ss_pred             ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCC--CcCHHHHHHH
Confidence                        899999999999999999999999999999988764321111  100  1113334  7899999999


Q ss_pred             HHHHhcCCCccccccccc-ccccccc
Q psy7936         181 TLHCALDEGAAKETGLYY-SDYKVAK  205 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i-~~~~~~~  205 (222)
                      ++||+ ++++.|+||+.| .++|...
T Consensus       230 v~fL~-S~~s~~itGq~i~VDGG~t~  254 (268)
T d2bgka1         230 VAYLA-GDESKYVSGLNLVIDGGYTR  254 (268)
T ss_dssp             HHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHh-ChhhCCccCceEEECcCccc
Confidence            99997 556899999999 4555544

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.4e-37  Score=246.79  Aligned_cols=172  Identities=20%  Similarity=0.288  Sum_probs=149.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.             .++.+++||+++++++++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v~~   69 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-------------DAARYVHLDVTQPAQWKA   69 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-------------GGEEEEECCTTCHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-------------CcceEEEeecCCHHHHHH
Confidence            4789999999999999999999999999999999999998888877653             367889999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh----------------h--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS----------------N--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~----------------~--------------------------------------  116 (222)
                      +++++.+.++++|+||||||.....                |                                      
T Consensus        70 ~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~  149 (244)
T d1nffa_          70 AVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC  149 (244)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB
T ss_pred             HHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccc
Confidence            9999999999999999999987600                0                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                               +..|+++||.|++++|||||+|+||+++|+|.....+..      ...|++|  +.+|+|+|+.+.||+ +
T Consensus       150 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~------~~~pl~R--~~~p~diA~~v~fL~-s  220 (244)
T d1nffa_         150 HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDI------FQTALGR--AAEPVEVSNLVVYLA-S  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTC------SCCSSSS--CBCHHHHHHHHHHHH-S
T ss_pred             cchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHH------HhccccC--CCCHHHHHHHHHHHh-C
Confidence                     899999999999999999999999999999987665321      2245556  789999999999996 5


Q ss_pred             CCccccccccc-cccccc
Q psy7936         188 EGAAKETGLYY-SDYKVA  204 (222)
Q Consensus       188 ~~~~~~~G~~i-~~~~~~  204 (222)
                      +++.++||+.| .++|..
T Consensus       221 ~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         221 DESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             hhhCCCcCCEEEECCCee
Confidence            67889999999 455544

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.2e-37  Score=250.98  Aligned_cols=178  Identities=17%  Similarity=0.157  Sum_probs=151.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++..          +.++.+++||+++.+++++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~----------g~~~~~~~~Dv~~~~~v~~   71 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK----------GVEARSYVCDVTSEEAVIG   71 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------TSCEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEccCCCHHHHHH
Confidence            589999999999999999999999999999999999999999999998763          6789999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----hh-------------h-------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----LS-------------N-------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----l~-------------~-------------------------------------  116 (222)
                      +++.+.+.++++|++|||||...    +.             |                                     
T Consensus        72 ~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~  151 (260)
T d1zema1          72 TVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN  151 (260)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT
T ss_pred             HHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc
Confidence            99999999999999999999764    00             0                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCC-----------C----CCcchhhhHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDD-----------T----YFPGARTLGRVLMWWWM  171 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~-----------~----~~~~~~~~~~~~~~~~~  171 (222)
                                +.+|+++||.|++++|||||+|+||+++|+|......           .    ..........|++|  +
T Consensus       152 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R--~  229 (260)
T d1zema1         152 MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRR--Y  229 (260)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSS--C
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCC--C
Confidence                      8999999999999999999999999999998632210           0    11111223346666  7


Q ss_pred             CChHHHHHHHHHHhcCCCcccccccccccc
Q psy7936         172 KTPEQGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       172 ~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      .+|+|+|..+.||+ ++.+.|+||+.|..+
T Consensus       230 g~pedvA~~v~fL~-S~~s~~itG~~i~VD  258 (260)
T d1zema1         230 GDINEIPGVVAFLL-GDDSSFMTGVNLPIA  258 (260)
T ss_dssp             BCGGGSHHHHHHHH-SGGGTTCCSCEEEES
T ss_pred             cCHHHHHHHHHHHh-CchhcCccCCeEEeC
Confidence            89999999999996 557899999999544

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.4e-37  Score=254.02  Aligned_cols=187  Identities=24%  Similarity=0.195  Sum_probs=155.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|++.|++|++++|+.+.++++.+++.+...       +..++.+++||+++++++++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~-------~~~~~~~~~~Dv~~~~~v~~   73 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV-------PAEKINAVVADVTEASGQDD   73 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-------CGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC-------CCcceEEEEeeCCCHHHHHH
Confidence            37899999999999999999999999999999999999999999999987520       23479999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH------------------hhh------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI------------------LSN------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~------------------l~~------------------------------------  116 (222)
                      +++.+.+.++++|++|||||...                  -+|                                    
T Consensus        74 ~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~  153 (274)
T d1xhla_          74 IINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS  153 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT
T ss_pred             HHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCC
Confidence            99999999999999999998653                  000                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCc--------chhhhHHHHHHHhcCChHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFP--------GARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~p~e~  177 (222)
                                 +.+|+++||.|++++|||||+|+||+++|+|.......+..        .......|++|  +.+|+|+
T Consensus       154 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR--~g~pedi  231 (274)
T d1xhla_         154 GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGH--CGKPEEI  231 (274)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSS--CBCHHHH
T ss_pred             CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCC--CcCHHHH
Confidence                       89999999999999999999999999999998765432111        01112246666  8899999


Q ss_pred             HHHHHHHhcCCCccccccccc-cccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYY-SDYKVAKS  206 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i-~~~~~~~~  206 (222)
                      |+.++||++.+.+.|+||+.| .++|....
T Consensus       232 A~~v~fL~S~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         232 ANIIVFLADRNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             HHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHcCCccccCccCcEEEeCcCHHHh
Confidence            999999975456789999999 55555443

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=3.4e-37  Score=249.20  Aligned_cols=177  Identities=24%  Similarity=0.226  Sum_probs=151.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      .|++|||||++|||+++|+.|+++|++|++++|+++.++++.+++++.          +.++.+++||++++++++++++
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~----------g~~~~~~~~Dv~~~~~v~~~~~   70 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA----------GGHAVAVKVDVSDRDQVFAAVE   70 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEeeCCCHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999874          6789999999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHhh----------------h-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCILS----------------N-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~----------------~-----------------------------------------  116 (222)
                      ++.+.++++|+||||||+....                |                                         
T Consensus        71 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~  150 (255)
T d1gega_          71 QARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAV  150 (255)
T ss_dssp             HHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCccccc
Confidence            9999999999999999987600                0                                         


Q ss_pred             -------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC----------CCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 -------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT----------YFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 -------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                             +.+|+++||.|++++|||||+|+||+++|+|.......          ..........|++|  +.+|+|+|+
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R--~~~peevA~  228 (255)
T d1gega_         151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGR--LSEPEDVAA  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCS--CBCHHHHHH
T ss_pred             chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCC--CcCHHHHHH
Confidence                   89999999999999999999999999999997644211          11111223356666  889999999


Q ss_pred             HHHHHhcCCCcccccccccc-cccc
Q psy7936         180 TTLHCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      .+.||+ ++++.++||+.|. ++|.
T Consensus       229 ~v~fL~-S~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         229 CVSYLA-SPDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             HHHHHH-SGGGTTCCSCEEEESSSS
T ss_pred             HHHHHh-CchhCCccCcEEEecCCE
Confidence            999997 5678999999995 5553

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=4.5e-37  Score=247.36  Aligned_cols=178  Identities=24%  Similarity=0.242  Sum_probs=137.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|++.|++|++++|+.+.  +..+.++.          .+.++.+++||+++.+++++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~----------~g~~~~~~~~Dvs~~~~v~~   69 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRN----------LGRRVLTVKCDVSQPGDVEA   69 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHH----------TTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHH----------cCCcEEEEEeeCCCHHHHHH
Confidence            4789999999999999999999999999999999998753  22333443          36789999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh----------------h--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS----------------N--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~----------------~--------------------------------------  116 (222)
                      +++++.+.++++|+||||||+....                |                                      
T Consensus        70 ~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~  149 (247)
T d2ew8a1          70 FGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY  149 (247)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCccc
Confidence            9999999999999999999987600                0                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchh-hhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGAR-TLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                               +..|+++||.|++++|||||+|+||+++|+|............. ....|++|  +.+|||+|+.+.||+ 
T Consensus       150 ~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r--~~~pedvA~~v~fL~-  226 (247)
T d2ew8a1         150 THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPR--LQVPLDLTGAAAFLA-  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCS--CCCTHHHHHHHHHHT-
T ss_pred             ccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCC--CCCHHHHHHHHHHHh-
Confidence                     89999999999999999999999999999998765443222211 12235555  789999999999996 


Q ss_pred             CCCcccccccccc-cccc
Q psy7936         187 DEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       187 ~~~~~~~~G~~i~-~~~~  203 (222)
                      ++.+.|+||+.|. ++|.
T Consensus       227 S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         227 SDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             SGGGTTCCSCEEEESSSC
T ss_pred             CchhcCCcCCeEEECCCE
Confidence            5578999999995 5543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.2e-36  Score=246.37  Aligned_cols=182  Identities=22%  Similarity=0.188  Sum_probs=149.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++|+||++|||||++|||+++|++|++.|++|++++|+++.++++.++++..          +.+++++.||+++.++++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~----------~~~~~~~~~D~s~~~~~~   71 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK----------GLNVEGSVCDLLSRTERD   71 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCCceEEEeecCCHHHHH
Confidence            6789999999999999999999999999999999999999999999998774          678899999999999999


Q ss_pred             HHHHHHHhhc-cceeEEEechhhHHhh----------------h------------------------------------
Q psy7936          90 DCAQDINQTE-ANVHILINNAVYCILS----------------N------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~-~~id~li~~ag~~~l~----------------~------------------------------------  116 (222)
                      ++++++.+.+ +++|++|||||.....                |                                    
T Consensus        72 ~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~  151 (258)
T d1ae1a_          72 KLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP  151 (258)
T ss_dssp             HHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence            9999999988 6899999999987700                0                                    


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-----CCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-----YFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                 +..|++.||.|++++|||||+|+||+++|+|.......     +.........|++|  +.+|+|+|+.
T Consensus       152 ~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR--~~~pediA~~  229 (258)
T d1ae1a_         152 SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGR--AGKPQEVSAL  229 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCS--CBCHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCC--CcCHHHHHHH
Confidence                       89999999999999999999999999999998765432     11122223446666  8899999999


Q ss_pred             HHHHhcCCCccccccccc-cccccc
Q psy7936         181 TLHCALDEGAAKETGLYY-SDYKVA  204 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i-~~~~~~  204 (222)
                      +.||+ ++++.++||+.| .++|..
T Consensus       230 v~fL~-S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         230 IAFLC-FPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             HHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             HHHHh-ChhhCCCcCcEEEeCCCee
Confidence            99996 657899999999 455443

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.5e-37  Score=248.35  Aligned_cols=175  Identities=23%  Similarity=0.256  Sum_probs=151.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEe-CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +++|||||++|||+++|+.|+++|++|++++ |+++.++++.++++..          +.++.++++|+++.++++++++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~Dv~~~~~v~~~~~   71 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY----------GGQAITFGGDVSKEADVEAMMK   71 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------TCEEEEEECCTTSHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc----------CCcEEEEeCCCCCHHHHHHHHH
Confidence            5899999999999999999999999999875 6778888888888764          6799999999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHhh----------------h-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCILS----------------N-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~----------------~-----------------------------------------  116 (222)
                      .+.+.++++|+||||||.....                |                                         
T Consensus        72 ~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y  151 (244)
T d1edoa_          72 TAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANY  151 (244)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHH
T ss_pred             HHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHH
Confidence            9999999999999999877600                0                                         


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                            +.+|+++|+.|++++|||||+|+||+++|+|.....++ .........|++|  +.+|+|+|+.+.|||.++.+
T Consensus       152 ~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~-~~~~~~~~~pl~R--~~~p~dvA~~v~fLa~S~~a  228 (244)
T d1edoa_         152 AAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED-MEKKILGTIPLGR--TGQPENVAGLVEFLALSPAA  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH-HHHHHHTSCTTCS--CBCHHHHHHHHHHHHHCSGG
T ss_pred             HHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHH-HHHHHHhcCCCCC--CcCHHHHHHHHHHHHCCchh
Confidence                  89999999999999999999999999999998876532 2222223456666  89999999999999878889


Q ss_pred             ccccccccc-ccc
Q psy7936         191 AKETGLYYS-DYK  202 (222)
Q Consensus       191 ~~~~G~~i~-~~~  202 (222)
                      .|+||+.|. ++|
T Consensus       229 ~~itG~~i~vdGG  241 (244)
T d1edoa_         229 SYITGQAFTIDGG  241 (244)
T ss_dssp             GGCCSCEEEESTT
T ss_pred             cCCcCCeEEeCCC
Confidence            999999995 444

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-36  Score=244.97  Aligned_cols=177  Identities=22%  Similarity=0.274  Sum_probs=150.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++....        ++.++.+++||++++++++++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~Dv~~~~~v~~~   72 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF--------EPQKTLFIQCDVADQQQLRDT   72 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS--------CGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc--------CCCcEEEEEeecCCHHHHHHH
Confidence            369999999999999999999999999999999999999999998886643        466899999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHHhhh-------------------------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCILSN-------------------------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~-------------------------------------------------------  116 (222)
                      ++.+.+.++++|+||||||......                                                       
T Consensus        73 ~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  152 (254)
T d2gdza1          73 FRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCAS  152 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HHHHHHHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHH
Confidence            9999999999999999999877100                                                       


Q ss_pred             ---HHHHHHH--HHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-------CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ---NILFYSI--LFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-------YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ---~~~~~~~--la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                         +.+|+++  |+.|++++|||||+|+||+++|+|.......       +.........|++|  +.+|+|+|+.++||
T Consensus       153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedvA~~v~fL  230 (254)
T d2gdza1         153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYG--ILDPPLIANGLITL  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHC--CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence               8899996  7889999999999999999999998765432       11222234456666  89999999999999


Q ss_pred             hcCCCcccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDY  201 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~  201 (222)
                      ++++   ++||+.|..+
T Consensus       231 ~s~~---~itG~~i~Vd  244 (254)
T d2gdza1         231 IEDD---ALNGAIMKIT  244 (254)
T ss_dssp             HHCT---TCSSCEEEEE
T ss_pred             HcCC---CCCCCEEEEC
Confidence            8653   5999999443

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-37  Score=246.61  Aligned_cols=175  Identities=20%  Similarity=0.195  Sum_probs=145.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++              .++.+++||+++.+++++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~--------------~~~~~~~~Dvs~~~~v~~   68 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL--------------PGAVFILCDVTQEDDVKT   68 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--------------TTEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc--------------CCCeEEEccCCCHHHHHH
Confidence            578999999999999999999999999999999999999888776553              256789999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh-----------------hh-------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL-----------------SN-------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l-----------------~~-------------------------------------  116 (222)
                      +++++.++++++|+||||||....                 +|                                     
T Consensus        69 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~  148 (250)
T d1ydea1          69 LVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA  148 (250)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCc
Confidence            999999999999999999996540                 00                                     


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-----CcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-----FPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                               +..|+++||.|++++|||||+|+||+|+|+|........     .........|++|  +.+|+|+|+.+.
T Consensus       149 ~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R--~g~p~eva~~v~  226 (250)
T d1ydea1         149 VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGR--MGQPAEVGAAAV  226 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSS--CBCHHHHHHHHH
T ss_pred             chhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCC--CCCHHHHHHHHH
Confidence                     899999999999999999999999999999976542211     1111112346666  889999999999


Q ss_pred             HHhcCCCcccccccccc-cccc
Q psy7936         183 HCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      ||++ + +.|+||+.|. ++|.
T Consensus       227 fL~S-d-a~~itG~~i~vDGG~  246 (250)
T d1ydea1         227 FLAS-E-ANFCTGIELLVTGGA  246 (250)
T ss_dssp             HHHH-H-CTTCCSCEEEESTTT
T ss_pred             HHhC-c-cCCCcCCeEEECCCc
Confidence            9975 4 6799999994 5554

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-36  Score=242.01  Aligned_cols=178  Identities=24%  Similarity=0.270  Sum_probs=152.3

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      |..|+||++|||||++|||+++|+.|+++|++|++++|++++++++.++++...        ++.++++++||+++++++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~--------~~~~~~~~~~Dls~~~~v   76 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG--------YPGTLIPYRCDLSNEEDI   76 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--------CSSEEEEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--------CCceEEEEEccCCCHHHH
Confidence            344889999999999999999999999999999999999999999999998863        456899999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHhh----------------h------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCILS----------------N------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l~----------------~------------------------------------  116 (222)
                      +++++++.+++++||+||||||.....                |                                    
T Consensus        77 ~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~  156 (257)
T d1xg5a_          77 LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  156 (257)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC
Confidence            999999999999999999999886500                0                                    


Q ss_pred             ---------------HHHHHHHHHhhc--CCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHH
Q psy7936         117 ---------------NILFYSILFYAI--PGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQ  179 (222)
Q Consensus       117 ---------------~~~~~~~la~~~--~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~  179 (222)
                                     +.+|+++|+.|+  +++||+||+|+||+++|++....... .........|+++  +.+|||+|+
T Consensus       157 ~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~-~~~~~~~~~~~~r--~~~pedvA~  233 (257)
T d1xg5a_         157 LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-DPEKAAATYEQMK--CLKPEDVAE  233 (257)
T ss_dssp             CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT-CHHHHHHHHC-----CBCHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh-hHHHHHhcCCCCC--CcCHHHHHH
Confidence                           899999999998  78999999999999999998765432 2333335567777  899999999


Q ss_pred             HHHHHhcCCCccccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYY  198 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i  198 (222)
                      .++||+++ ...++||+.+
T Consensus       234 ~v~fL~s~-~a~~itG~i~  251 (257)
T d1xg5a_         234 AVIYVLST-PAHIQIGDIQ  251 (257)
T ss_dssp             HHHHHHHS-CTTEEEEEEE
T ss_pred             HHHHHhCC-hhcCeECCEE
Confidence            99999755 5789999964

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.9e-36  Score=241.51  Aligned_cols=180  Identities=17%  Similarity=0.141  Sum_probs=141.3

Q ss_pred             CCCCCCCEEEEecCCC--chHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           9 ASRLDGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ..+|+||++|||||++  |||+++|++|++.|++|++++|+++..++..+....           .++..++++|+++.+
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~   71 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA-----------LGGALLFRADVTQDE   71 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-----------TTCCEEEECCTTCHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhc-----------cCcccccccccCCHH
Confidence            3579999999999986  999999999999999999999997665555443332           446778999999999


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHh--------------------hh------------------------------
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCIL--------------------SN------------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l--------------------~~------------------------------  116 (222)
                      +++++++.+.+.++++|++|||||....                    +|                              
T Consensus        72 ~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~  151 (256)
T d1ulua_          72 ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE  151 (256)
T ss_dssp             HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT
T ss_pred             HHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhc
Confidence            9999999999999999999999986430                    00                              


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                     +..+++++|.|++++|||||+|+||+++|++....... +.........|++|  +.+|+|+|+.
T Consensus       152 ~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R--~~~pedvA~~  229 (256)
T d1ulua_         152 KVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRR--NITQEEVGNL  229 (256)
T ss_dssp             SBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSS--CCCHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCC--CcCHHHHHHH
Confidence                           89999999999999999999999999999998765432 22233334557777  8999999999


Q ss_pred             HHHHhcCCCccccccccccccc
Q psy7936         181 TLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +.||+ ++++.++||+.|..++
T Consensus       230 v~fL~-S~~s~~itG~~i~VDG  250 (256)
T d1ulua_         230 GLFLL-SPLASGITGEVVYVDA  250 (256)
T ss_dssp             HHHHH-SGGGTTCCSCEEEEST
T ss_pred             HHHHh-CchhCCccCCeEEECc
Confidence            99996 5678899999995443

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-36  Score=243.73  Aligned_cols=173  Identities=21%  Similarity=0.260  Sum_probs=143.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++              ..+.+++||+++.++++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~--------------~~~~~~~~Dv~~~~~v~   66 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC--------------PGIEPVCVDLGDWDATE   66 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS--------------TTCEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc--------------CCCeEEEEeCCCHHHHH
Confidence            3689999999999999999999999999999999999998887776543              24567899999999987


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhh----------------h-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILS----------------N-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~----------------~-------------------------------------  116 (222)
                      +++    ++++++|+||||||+....                |                                     
T Consensus        67 ~~~----~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~  142 (242)
T d1cyda_          67 KAL----GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP  142 (242)
T ss_dssp             HHH----TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT
T ss_pred             HHH----HHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC
Confidence            765    4569999999999976600                0                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                 +.+|+++|+.|++++|||||+|+||+++|+|....... +.........|++|  +.+|||+|+.+.||
T Consensus       143 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R--~~~peeva~~v~fL  220 (242)
T d1cyda_         143 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRK--FAEVEDVVNSILFL  220 (242)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSS--CBCHHHHHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                       89999999999999999999999999999998765443 22333334556777  89999999999999


Q ss_pred             hcCCCcccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~~  203 (222)
                      + ++++.|+||+.|..+|.
T Consensus       221 ~-S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         221 L-SDRSASTSGGGILVDAG  238 (242)
T ss_dssp             H-SGGGTTCCSSEEEESTT
T ss_pred             h-CchhcCcCCceEEeCcc
Confidence            6 56789999999954443

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=5.7e-36  Score=244.58  Aligned_cols=179  Identities=21%  Similarity=0.175  Sum_probs=149.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++             +.++.++++|+++.+++++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-------------~~~~~~~~~Dv~~~~~~~~   68 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-------------GDNVLGIVGDVRSLEDQKQ   68 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------------GGGEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------------CCCeeEEecccccHHHHHH
Confidence            489999999999999999999999999999999999999888776654             4478899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH---------------------hhh---------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI---------------------LSN---------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~---------------------l~~---------------------------------  116 (222)
                      +++.+.+.++++|++|||||+..                     -+|                                 
T Consensus        69 ~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~  148 (276)
T d1bdba_          69 AASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYP  148 (276)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTST
T ss_pred             HHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccC
Confidence            99999999999999999999643                     000                                 


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC---------CCcchhhhHHHHHHHhcCCh
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT---------YFPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~p  174 (222)
                                   +.+|+++||.|++++ ||||+|+||+|+|+|.......         +.........|++|  +.+|
T Consensus       149 ~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR--~g~p  225 (276)
T d1bdba_         149 NGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGR--MPEV  225 (276)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSS--CCCG
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCC--CcCH
Confidence                         899999999999975 9999999999999997643221         11122223456777  8899


Q ss_pred             HHHHHHHHHHhcCCCccccccccc-ccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYY-SDYKVAK  205 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i-~~~~~~~  205 (222)
                      +|+|..++|||+++++.|+||+.| .++|...
T Consensus       226 eeva~~v~fL~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         226 EEYTGAYVFFATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             GGGSHHHHHHHCHHHHTTCSSCEEEESSSGGG
T ss_pred             HHHHHHHHHHcCCcccCCeeCcEEEECcChhh
Confidence            999999999986567889999999 5555443

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.2e-36  Score=243.31  Aligned_cols=169  Identities=22%  Similarity=0.255  Sum_probs=143.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +.|+||++|||||++|||+++|+.|++.|++|++++|+.+.                     ..++..+++|++++++++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~---------------------~~~~~~~~~Dv~~~~~v~   61 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA---------------------PKGLFGVEVDVTDSDAVD   61 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC---------------------CTTSEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch---------------------hcCceEEEEecCCHHHHH
Confidence            46899999999999999999999999999999999998753                     335678999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhhh-----------------------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILSN-----------------------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~~-----------------------------------------------------  116 (222)
                      ++++++.+.++++|+||||||+.....                                                     
T Consensus        62 ~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~  141 (237)
T d1uzma1          62 RAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN  141 (237)
T ss_dssp             HHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C
T ss_pred             HHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcc
Confidence            999999999999999999999766000                                                     


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                                +..|+++|+.|++++|||||+|+||+++|+|.+...+. .........|++|  +.+|||+|+.+.||+ 
T Consensus       142 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~-~~~~~~~~~pl~R--~~~pedvA~~v~fL~-  217 (237)
T d1uzma1         142 QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDER-IQQGALQFIPAKR--VGTPAEVAGVVSFLA-  217 (237)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHH-HHHHHGGGCTTCS--CBCHHHHHHHHHHHH-
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHH-HHHHHHhcCCCCC--CcCHHHHHHHHHHHh-
Confidence                      89999999999999999999999999999998765432 2222224456777  899999999999996 


Q ss_pred             CCCccccccccc-ccccc
Q psy7936         187 DEGAAKETGLYY-SDYKV  203 (222)
Q Consensus       187 ~~~~~~~~G~~i-~~~~~  203 (222)
                      ++++.|+||+.| .++|.
T Consensus       218 S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         218 SEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CchhcCCcCCeEEECCCC
Confidence            557889999999 45553

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.1e-36  Score=241.74  Aligned_cols=174  Identities=25%  Similarity=0.222  Sum_probs=141.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++..+ +.+.+               ...+++||+++.+++++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~---------------~~~~~~~Dv~~~~~v~~   65 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI---------------GGAFFQVDLEDERERVR   65 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH---------------TCEEEECCTTCHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc---------------CCeEEEEeCCCHHHHHH
Confidence            378999999999999999999999999999999999987543 33222               23468999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++++.+.+++||+||||||+...                +|                                      
T Consensus        66 ~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~  145 (248)
T d2d1ya1          66 FVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN  145 (248)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTB
T ss_pred             HHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccccc
Confidence            999999999999999999998650                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCC-----CCCCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMD-----DTYFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                               +..|+++||.|++++|||||+|+||+++|+|.....     ++..........|++|  +.+|+|+|+.+.
T Consensus       146 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R--~~~pedia~~v~  223 (248)
T d2d1ya1         146 AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRR--LGKPEEVAEAVL  223 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSS--CBCHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCC--CcCHHHHHHHHH
Confidence                     899999999999999999999999999999875431     1122223334456776  889999999999


Q ss_pred             HHhcCCCcccccccccc-cccc
Q psy7936         183 HCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      ||+ ++.+.|+||+.|. ++|.
T Consensus       224 fL~-S~~s~~itG~~i~vDGG~  244 (248)
T d2d1ya1         224 FLA-SEKASFITGAILPVDGGM  244 (248)
T ss_dssp             HHH-SGGGTTCCSCEEEESTTG
T ss_pred             HHh-CchhcCCCCcEEEcCcCc
Confidence            996 5678999999994 4444

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-36  Score=239.65  Aligned_cols=173  Identities=21%  Similarity=0.247  Sum_probs=143.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +.|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.              .+.++++|++|.++++
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~--------------~~~~~~~Dv~d~~~v~   68 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--------------GIEPVCVDLGDWEATE   68 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--------------TCEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC--------------CCeEEEEeCCCHHHHH
Confidence            34899999999999999999999999999999999999998887765542              3567899999999988


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhh----------------h-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILS----------------N-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~----------------~-------------------------------------  116 (222)
                      ++++    +++++|+||||||.....                |                                     
T Consensus        69 ~~~~----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~  144 (244)
T d1pr9a_          69 RALG----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT  144 (244)
T ss_dssp             HHHT----TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT
T ss_pred             HHHH----HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc
Confidence            7654    568999999999887600                0                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC-CcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY-FPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                 +..|+++||.|++++|||||+|+||+++|+|.+...... .........|++|  +.+|+|+|+.+.||
T Consensus       145 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R--~~~peevA~~v~fL  222 (244)
T d1pr9a_         145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGK--FAEVEHVVNAILFL  222 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCS--CBCHHHHHHHHHHH
T ss_pred             chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                       899999999999999999999999999999987665432 2222223456666  88999999999999


Q ss_pred             hcCCCcccccccccccccc
Q psy7936         185 ALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       185 ~~~~~~~~~~G~~i~~~~~  203 (222)
                      + ++.+.|+||+.|..+|.
T Consensus       223 ~-S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         223 L-SDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             H-SGGGTTCCSCEEEESTT
T ss_pred             h-CchhCCcCCcEEEECcc
Confidence            6 56789999999954443

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.3e-35  Score=240.43  Aligned_cols=180  Identities=18%  Similarity=0.146  Sum_probs=149.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe-CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ++|.||++|||||++|||+++|+.|++.|++|++++ |+.+.++++.+++++.          +.++.+++||+++.+++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~D~~~~~~v   71 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL----------GAQGVAIQADISKPSEV   71 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCCEEEEECCTTSHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc----------CCCceEecCCCCCHHHH
Confidence            468999999999999999999999999999999865 5667788888888774          67899999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHhhh----------------------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCILSN----------------------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l~~----------------------------------------------------  116 (222)
                      +.+++.+.++++++|++|||||......                                                    
T Consensus        72 ~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~  151 (259)
T d1ja9a_          72 VALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN  151 (259)
T ss_dssp             HHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS
T ss_pred             HHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCC
Confidence            9999999999999999999999876000                                                    


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC------------CCcchhhhHHHHHHHhcCCh
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT------------YFPGARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~p  174 (222)
                                +..++++||.|++++|||||+|+||+++|+|.+.....            ++........|++|  +.+|
T Consensus       152 ~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R--~g~p  229 (259)
T d1ja9a_         152 HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKR--IGYP  229 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSS--CBCH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCC--CcCH
Confidence                      89999999999999999999999999999986432111            11111223346666  8899


Q ss_pred             HHHHHHHHHHhcCCCccccccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+|+.++||| ++.+.++||+.|..++
T Consensus       230 ~eVa~~v~fL~-S~~a~~itG~~i~vDG  256 (259)
T d1ja9a_         230 ADIGRAVSALC-QEESEWINGQVIKLTG  256 (259)
T ss_dssp             HHHHHHHHHHH-SGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHh-CchhcCCcCceEEeCC
Confidence            99999999997 5568999999995443

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=4.6e-36  Score=242.16  Aligned_cols=177  Identities=19%  Similarity=0.182  Sum_probs=147.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++             +.+..++++|+++.+++++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~~~~   69 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-------------GERSMFVRHDVSSEADWTL   69 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-------------CTTEEEECCCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------------CCCeEEEEeecCCHHHHHH
Confidence            489999999999999999999999999999999999999998887765             3467899999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh----------------h--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS----------------N--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~----------------~--------------------------------------  116 (222)
                      +++.+.++++++|+||||||+....                |                                      
T Consensus        70 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~  149 (253)
T d1hxha_          70 VMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYA  149 (253)
T ss_dssp             HHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccc
Confidence            9999999999999999999986600                0                                      


Q ss_pred             --------HHHHHHHHHhhcCC--CCeEEEEEeCCcccCCcCCCCCCCCCcc----hhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 --------NILFYSILFYAIPG--KNVNVYAVHPGIVKTELGRYMDDTYFPG----ARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 --------~~~~~~~la~~~~~--~gI~v~~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                              +..|++++|.|+++  +|||||+|+||+++|+|.....+.....    ......|++|  +.+|||+|+.++
T Consensus       150 ~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr--~~~pedvA~~v~  227 (253)
T d1hxha_         150 GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGR--AYMPERIAQLVL  227 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCC--EECHHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCC--CCCHHHHHHHHH
Confidence                    89999999999987  4599999999999999976543321111    1112344555  789999999999


Q ss_pred             HHhcCCCcccccccccccccc
Q psy7936         183 HCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ||+ ++++.|+||+.|..++.
T Consensus       228 fL~-S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         228 FLA-SDESSVMSGSELHADNS  247 (253)
T ss_dssp             HHH-SGGGTTCCSCEEEESSS
T ss_pred             HHh-ChhhCCCcCcEEEECcc
Confidence            996 56789999999954443

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.1e-35  Score=240.75  Aligned_cols=180  Identities=22%  Similarity=0.258  Sum_probs=150.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC-hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|+ .+.++++.+.+++.          +.++.++++|+++++++
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~D~~~~~~v   83 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN----------GSDAACVKANVGVVEDI   83 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh----------CCceeeEeCCCCCHHHH
Confidence            45899999999999999999999999999999999876 56778888888764          67899999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHhh----------------h------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCILS----------------N------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l~----------------~------------------------------------  116 (222)
                      .++++.+.+.++++|++|||+|.....                |                                    
T Consensus        84 ~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~  163 (272)
T d1g0oa_          84 VRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPK  163 (272)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSS
T ss_pred             HHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccc
Confidence            999999999999999999999877600                0                                    


Q ss_pred             ----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCC------Ccc------hhhhHHHHHHHhcCCh
Q psy7936         117 ----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTY------FPG------ARTLGRVLMWWWMKTP  174 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~------~~~------~~~~~~~~~~~~~~~p  174 (222)
                                +..|+++||.|++++|||||+|+||+++|+|........      ...      ......|++|  +.+|
T Consensus       164 ~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR--~~~p  241 (272)
T d1g0oa_         164 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR--VGLP  241 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCS--CBCH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCC--CcCH
Confidence                      899999999999999999999999999999875432210      000      0112345666  8899


Q ss_pred             HHHHHHHHHHhcCCCccccccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                      +|+|..+.||+ ++.+.++||+.|..+|
T Consensus       242 eevA~~v~fL~-s~~s~~itG~~i~vDG  268 (272)
T d1g0oa_         242 IDIARVVCFLA-SNDGGWVTGKVIGIDG  268 (272)
T ss_dssp             HHHHHHHHHHH-SGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHh-CchhcCccCceEeECC
Confidence            99999999996 5678999999995443

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=6.3e-35  Score=235.40  Aligned_cols=176  Identities=15%  Similarity=0.141  Sum_probs=145.4

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      |+|||||++|||+++|+.|++.|++|++++|+.+.++++......                +.++|+++.++++++++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~----------------~~~~dv~~~~~~~~~~~~~   65 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET----------------YPQLKPMSEQEPAELIEAV   65 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH----------------CTTSEECCCCSHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc----------------EEEeccCCHHHHHHHHHHH
Confidence            799999999999999999999999999999999888776544322                3468999999999999999


Q ss_pred             HhhccceeEEEechhhHH----hh-------------h------------------------------------------
Q psy7936          96 NQTEANVHILINNAVYCI----LS-------------N------------------------------------------  116 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~----l~-------------~------------------------------------------  116 (222)
                      .+.+++||+||||||+..    +.             |                                          
T Consensus        66 ~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~  145 (252)
T d1zmta1          66 TSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYT  145 (252)
T ss_dssp             HHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHH
T ss_pred             HHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccc
Confidence            999999999999998754    00             0                                          


Q ss_pred             -----HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-------CCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 -----NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-------YFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 -----~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                           +..|+++||.|++++|||||+|+||+++|+|.......       +.........|++|  +.+|||+|..+.||
T Consensus       146 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R--~g~pedvA~~v~fL  223 (252)
T d1zmta1         146 SARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQR--LGTQKELGELVAFL  223 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSS--CBCHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHH
Confidence                 89999999999999999999999999999998765432       11122223445666  88999999999999


Q ss_pred             hcCCCccccccccc-ccccccccCCCc
Q psy7936         185 ALDEGAAKETGLYY-SDYKVAKSRNFP  210 (222)
Q Consensus       185 ~~~~~~~~~~G~~i-~~~~~~~~~~~~  210 (222)
                      | ++.+.|+||+.| .++|.....++|
T Consensus       224 ~-S~~s~~iTG~~i~vdGG~~~~~~~p  249 (252)
T d1zmta1         224 A-SGSCDYLTGQVFWLAGGFPMIERWP  249 (252)
T ss_dssp             H-TTSCGGGTTCEEEESTTCCCCCCCT
T ss_pred             h-CchhcCCcCCeEEECCCceeCCCCC
Confidence            7 556889999999 667766665655

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.6e-34  Score=230.59  Aligned_cols=165  Identities=22%  Similarity=0.172  Sum_probs=133.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++.+++.                 +  ..++.||+++.  +   
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-----------------~--~~~~~~Dv~~~--~---   57 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-----------------G--HRYVVCDLRKD--L---   57 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-----------------C--SEEEECCTTTC--H---
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-----------------C--CcEEEcchHHH--H---
Confidence            6899999999999999999999999999999999998755321                 1  23578999864  3   


Q ss_pred             HHHHHhhccceeEEEechhhHHhh----------------h---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCILS----------------N---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~----------------~---------------------------------------  116 (222)
                       +.+.++++++|+||||||.....                |                                       
T Consensus        58 -~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~  136 (234)
T d1o5ia_          58 -DLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLY  136 (234)
T ss_dssp             -HHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBH
T ss_pred             -HHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccc
Confidence             34556779999999999976500                0                                       


Q ss_pred             --------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         117 --------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       117 --------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                              +..|++++|.|++++|||||+|+||+++|+|......++.........|++|  +.+|||+|..+.||+ ++
T Consensus       137 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R--~~~pediA~~v~fL~-S~  213 (234)
T d1o5ia_         137 TSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRR--MAKPEEIASVVAFLC-SE  213 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSS--CBCHHHHHHHHHHHH-SG
T ss_pred             cchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCC--CcCHHHHHHHHHHHh-Ch
Confidence                    8999999999999999999999999999999876544333333334567777  899999999999996 56


Q ss_pred             Ccccccccccc-ccccc
Q psy7936         189 GAAKETGLYYS-DYKVA  204 (222)
Q Consensus       189 ~~~~~~G~~i~-~~~~~  204 (222)
                      ++.|+||+.|. ++|..
T Consensus       214 ~s~~itG~~i~vDGG~s  230 (234)
T d1o5ia_         214 KASYLTGQTIVVDGGLS  230 (234)
T ss_dssp             GGTTCCSCEEEESTTCC
T ss_pred             hhcCCcCcEEEECcccc
Confidence            78999999994 55543

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=7.3e-33  Score=221.66  Aligned_cols=161  Identities=20%  Similarity=0.239  Sum_probs=140.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCE-------EEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAK-------VIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~-------v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +++|||||++|||+++|+.|+++|++       |++++|+.+.++++.++++..          +.++.+++||+++.++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~----------g~~~~~~~~Dvt~~~~   71 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE----------GALTDTITADISDMAD   71 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT----------TCEEEEEECCTTSHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc----------CCcEEEEEecCCCHHH
Confidence            47899999999999999999999987       999999999999999998764          6789999999999999


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHhh----------------h-----------------------------------
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCILS----------------N-----------------------------------  116 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l~----------------~-----------------------------------  116 (222)
                      ++++++++.++++++|+||||||+....                |                                   
T Consensus        72 v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~  151 (240)
T d2bd0a1          72 VRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF  151 (240)
T ss_dssp             HHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC
Confidence            9999999999999999999999987600                0                                   


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHC  184 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l  184 (222)
                                  +.+|+++|+.|++++|||||+|+||+++|+|.........          .+  +.+|||+|+.++|+
T Consensus       152 ~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~~----------~~--~~~PedvA~~v~~l  219 (240)
T d2bd0a1         152 RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQ----------AL--MMMPEDIAAPVVQA  219 (240)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTG----------GG--SBCHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhhH----------hc--CCCHHHHHHHHHHH
Confidence                        8999999999999999999999999999999887653211          11  68999999999999


Q ss_pred             hcCCCccccccccc
Q psy7936         185 ALDEGAAKETGLYY  198 (222)
Q Consensus       185 ~~~~~~~~~~G~~i  198 (222)
                      ++++ ..+++|+.+
T Consensus       220 ~s~~-~~~~~~~~~  232 (240)
T d2bd0a1         220 YLQP-SRTVVEEII  232 (240)
T ss_dssp             HTSC-TTEEEEEEE
T ss_pred             HcCC-ccCccCCEE
Confidence            8765 456666543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=3.5e-33  Score=227.33  Aligned_cols=178  Identities=13%  Similarity=0.130  Sum_probs=146.0

Q ss_pred             CCCCEEEEecCCC--chHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |+||++|||||+|  |||+++|+.|+++|++|++++|+++. ++..+++...          +....++.+|+++..++.
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~-~~~~~~l~~~----------~~~~~~~~~d~~~~~~~~   71 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRVRPIAQE----------LNSPYVYELDVSKEEHFK   71 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHHHHHHHH----------TTCCCEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHhh----------CCceeEeeecccchhhHH
Confidence            7899999999875  99999999999999999999999653 3344455443          446678899999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhhh-----------------------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILSN-----------------------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~~-----------------------------------------------------  116 (222)
                      ++++++.+.++++|++|||+|......                                                     
T Consensus        72 ~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~  151 (274)
T d2pd4a1          72 SLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM  151 (274)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc
Confidence            999999999999999999999766110                                                     


Q ss_pred             ------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC-cchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF-PGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                  +..++++++.|++++|||||+|+||+++|+|.......+. ........|++|  +.+|+|+|..+.|
T Consensus       152 ~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r--~~~pedIA~~v~f  229 (274)
T d2pd4a1         152 AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRK--NVSLEEVGNAGMY  229 (274)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSS--CCCHHHHHHHHHH
T ss_pred             ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccC--CcCHHHHHHHHHH
Confidence                        8999999999999999999999999999999877654322 222223445556  7899999999999


Q ss_pred             HhcCCCccccccccc-ccccc
Q psy7936         184 CALDEGAAKETGLYY-SDYKV  203 (222)
Q Consensus       184 l~~~~~~~~~~G~~i-~~~~~  203 (222)
                      |+ ++.+.++||+.| .|+|.
T Consensus       230 L~-S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         230 LL-SSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             HH-SGGGTTCCSCEEEESTTG
T ss_pred             Hh-ChhhCCCcCceEEECCCh
Confidence            97 557899999999 45553

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-32  Score=224.51  Aligned_cols=164  Identities=24%  Similarity=0.399  Sum_probs=140.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +++|||||++|||+++|++|++. |++|++++|+.++++++.++|+..          +.++.+++||+++.++++++++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~Dvs~~~sv~~~~~   73 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE----------GLSPRFHQLDIDDLQSIRALRD   73 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT----------TCCCEEEECCTTCHHHHHHHHH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEEecCCHHHHHHHHH
Confidence            46799999999999999999986 899999999999999999999875          5678899999999999999999


Q ss_pred             HHHhhccceeEEEechhhHHh----------------hh-----------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCIL----------------SN-----------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l----------------~~-----------------------------------------  116 (222)
                      ++.+++++||+||||||+...                +|                                         
T Consensus        74 ~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~  153 (275)
T d1wmaa1          74 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQ  153 (275)
T ss_dssp             HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHH
T ss_pred             HHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhh
Confidence            999999999999999998650                00                                         


Q ss_pred             ---------------------------------------------HHHHHHHHHhhcC----CCCeEEEEEeCCcccCCc
Q psy7936         117 ---------------------------------------------NILFYSILFYAIP----GKNVNVYAVHPGIVKTEL  147 (222)
Q Consensus       117 ---------------------------------------------~~~~~~~la~~~~----~~gI~v~~v~PG~v~T~~  147 (222)
                                                                   +..|++.++.+++    ..||+||+|+||+|+|+|
T Consensus       154 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m  233 (275)
T d1wmaa1         154 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  233 (275)
T ss_dssp             HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             hhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence                                                         4556777777764    469999999999999999


Q ss_pred             CCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc-CCCccccccccccccccccc
Q psy7936         148 GRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL-DEGAAKETGLYYSDYKVAKS  206 (222)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~-~~~~~~~~G~~i~~~~~~~~  206 (222)
                      .....                  ..+|||+|+.++|++. .++..+++|+|+.++++..|
T Consensus       234 ~~~~~------------------~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~~~v~~w  275 (275)
T d1wmaa1         234 AGPKA------------------TKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW  275 (275)
T ss_dssp             TCTTC------------------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEECC
T ss_pred             ccCcc------------------cCCHHHHHHHHHHHHcCChhhcCCCeEEEECCEEecC
Confidence            87553                  5689999999999975 45567889999987766543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=3.1e-32  Score=220.32  Aligned_cols=178  Identities=17%  Similarity=0.192  Sum_probs=145.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHh---CCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYG---IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ..|+||++|||||++|||+++|++|++   .|++|++++|+.+.++++.++|+...        ++.++.+++||+++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~--------~~~~~~~~~~Dvs~~~   73 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ--------PDLKVVLAAADLGTEA   73 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC--------TTSEEEEEECCTTSHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhc--------CCceEEEEEccCCCHH
Confidence            358999999999999999999999996   69999999999999999999998764        5679999999999999


Q ss_pred             hHHHHHHHHHhh----ccceeEEEechhhHH-------------------hhh---------------------------
Q psy7936          87 SIRDCAQDINQT----EANVHILINNAVYCI-------------------LSN---------------------------  116 (222)
Q Consensus        87 ~v~~~~~~i~~~----~~~id~li~~ag~~~-------------------l~~---------------------------  116 (222)
                      +++++++.+.+.    ++.+|++|||||...                   -+|                           
T Consensus        74 ~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~  153 (259)
T d1oaaa_          74 GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVN  153 (259)
T ss_dssp             HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEE
T ss_pred             HHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccc
Confidence            999999988663    468999999998643                   000                           


Q ss_pred             ----------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC----CCcchhhhHHHHHHHh
Q psy7936         117 ----------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT----YFPGARTLGRVLMWWW  170 (222)
Q Consensus       117 ----------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~  170 (222)
                                            +..|+++|+.|  ++|||||+|+||+|+|+|.......    +.........+.++  
T Consensus       154 isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r--  229 (259)
T d1oaaa_         154 ISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGA--  229 (259)
T ss_dssp             ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTC--
T ss_pred             cccccccCCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCC--
Confidence                                  89999999998  5799999999999999997643221    11112223344545  


Q ss_pred             cCChHHHHHHHHHHhcCCCcccccccccccc
Q psy7936         171 MKTPEQGAQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       171 ~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      +.+|+|+|+.+++|+.+  ..++||++|+.+
T Consensus       230 ~~~p~evA~~i~~ll~~--~s~~TG~~idv~  258 (259)
T d1oaaa_         230 LVDCGTSAQKLLGLLQK--DTFQSGAHVDFY  258 (259)
T ss_dssp             SBCHHHHHHHHHHHHHH--CCSCTTEEEETT
T ss_pred             CCCHHHHHHHHHHHhhh--ccCCCCCeEEec
Confidence            78999999999999754  359999998654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=7.9e-32  Score=217.42  Aligned_cols=178  Identities=15%  Similarity=0.112  Sum_probs=146.5

Q ss_pred             CCCCEEEEecCCC--chHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |+||++|||||++  |||+++|+.|+++|++|++++|+++..+.+.+....           ..+..++.+|+++..++.
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~   71 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ-----------LGSDIVLQCDVAEDASID   71 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH-----------TTCCCEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhh-----------cCCcceeecccchHHHHH
Confidence            7899999999998  899999999999999999999997765555443332           446678899999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhh---------------------h--------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILS---------------------N--------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~---------------------~--------------------------------  116 (222)
                      .....+.+.++++|++|||++.....                     +                                
T Consensus        72 ~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~  151 (258)
T d1qsga_          72 TMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA  151 (258)
T ss_dssp             HHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred             HHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC
Confidence            99999999999999999999775400                     0                                


Q ss_pred             -------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcchhhhHHHHHHHhcCChHHHHHHHH
Q psy7936         117 -------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGARTLGRVLMWWWMKTPEQGAQTTL  182 (222)
Q Consensus       117 -------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~e~a~~i~  182 (222)
                                   +..|++.+|.|++++|||||+|+||+|+|+|....... ..........|++|  +.+|||+|..+.
T Consensus       152 ~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R--~~~peeia~~v~  229 (258)
T d1qsga_         152 IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR--TVTIEDVGNSAA  229 (258)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSS--CCCHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCC--CcCHHHHHHHHH
Confidence                         89999999999999999999999999999998765433 22222224456666  899999999999


Q ss_pred             HHhcCCCcccccccccc-cccc
Q psy7936         183 HCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       183 ~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      ||+ ++.+.++||+.|. |+|.
T Consensus       230 fL~-s~~s~~itG~~i~vDGG~  250 (258)
T d1qsga_         230 FLC-SDLSAGISGEVVHVDGGF  250 (258)
T ss_dssp             HHT-SGGGTTCCSCEEEESTTG
T ss_pred             HHh-CchhcCccCceEEECcCH
Confidence            996 5568899999995 5543

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.2e-33  Score=222.34  Aligned_cols=172  Identities=22%  Similarity=0.161  Sum_probs=135.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+               ...+....+|+.+.+.+.
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~---------------~~~~~~~~~d~~~~~~~~   66 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK---------------YPGIQTRVLDVTKKKQID   66 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG---------------STTEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---------------ccCCceeeeecccccccc
Confidence            44899999999999999999999999999999999999987765432               224667788888766555


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhhh-----------------------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILSN-----------------------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~~-----------------------------------------------------  116 (222)
                      ..    .+..+++|+||||||......                                                     
T Consensus        67 ~~----~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~  142 (245)
T d2ag5a1          67 QF----ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV  142 (245)
T ss_dssp             HH----HHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT
T ss_pred             cc----ccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCcc
Confidence            44    455689999999999877100                                                     


Q ss_pred             -----------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-----CCcchhhhHHHHHHHhcCChHHHHHH
Q psy7936         117 -----------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-----YFPGARTLGRVLMWWWMKTPEQGAQT  180 (222)
Q Consensus       117 -----------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~e~a~~  180 (222)
                                 +.++++.||.|++++|||||+|+||+++|+|.......     ..........|++|  +.+|+|+|+.
T Consensus       143 ~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R--~~~pedva~~  220 (245)
T d2ag5a1         143 NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGR--FATAEEIAML  220 (245)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSS--CEEHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCC--CcCHHHHHHH
Confidence                       89999999999999999999999999999997653221     11112223456666  7899999999


Q ss_pred             HHHHhcCCCcccccccccc-cccc
Q psy7936         181 TLHCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       181 i~~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      +.||+ ++++.++||+.|. ++|.
T Consensus       221 v~fL~-s~~s~~iTG~~i~VDGG~  243 (245)
T d2ag5a1         221 CVYLA-SDESAYVTGNPVIIDGGW  243 (245)
T ss_dssp             HHHHH-SGGGTTCCSCEEEECTTG
T ss_pred             HHHHh-ChhhCCCcCceEEeCCCc
Confidence            99996 5678999999995 4443

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.97  E-value=6.5e-32  Score=217.82  Aligned_cols=179  Identities=22%  Similarity=0.207  Sum_probs=141.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCC-ChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLA-SFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v   88 (222)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+..+++.+.....         ++.++.++.+|++ +.+++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~d~~~~~~~~   71 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN---------PKVNITFHTYDVTVPVAES   71 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC---------TTSEEEEEECCTTSCHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhC---------CCCCEEEEEeecCCCHHHH
Confidence            3689999999999999999999999999999999988877666554433332         5679999999998 66789


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHh--------hh--------------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCIL--------SN--------------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l--------~~--------------------------------------------  116 (222)
                      +++++.+.+++++||+||||||....        +|                                            
T Consensus        72 ~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y  151 (254)
T d1sbya1          72 KKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             HHHHHHHHHHcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence            99999999999999999999997660        00                                            


Q ss_pred             ------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCc
Q psy7936         117 ------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGA  190 (222)
Q Consensus       117 ------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~  190 (222)
                            +..|+++|+.+++++|||||+|+||+|+|+|.+...............+..+ ...+||++|+.+++++..   
T Consensus       152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~va~~~~~~~~~---  227 (254)
T d1sbya1         152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSH-PTQTSEQCGQNFVKAIEA---  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTS-CCEEHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccC-CCCCHHHHHHHHHHhhhC---
Confidence                  8999999999999999999999999999999876543222222212223322 256899999998887532   


Q ss_pred             ccccccccc-ccc
Q psy7936         191 AKETGLYYS-DYK  202 (222)
Q Consensus       191 ~~~~G~~i~-~~~  202 (222)
                       .+||+.+. ++|
T Consensus       228 -~~tG~vi~vdgG  239 (254)
T d1sbya1         228 -NKNGAIWKLDLG  239 (254)
T ss_dssp             -CCTTCEEEEETT
T ss_pred             -CCCCCEEEECCC
Confidence             45999984 444

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5e-31  Score=211.28  Aligned_cols=156  Identities=24%  Similarity=0.292  Sum_probs=137.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.++++..          +.++.++.||++|.++++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~----------~~~~~~~~~Dvs~~~~v~   72 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL----------GAKVHTFVVDCSNREDIY   72 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------CCcEEEEEeeCCCHHHHH
Confidence            5689999999999999999999999999999999999999999999999763          678999999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhh----------------h-------------------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILS----------------N-------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~----------------~-------------------------------------  116 (222)
                      ++++.+.+.++++|++|||||.....                |                                     
T Consensus        73 ~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~  152 (244)
T d1yb1a_          73 SSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF  152 (244)
T ss_dssp             HHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH
T ss_pred             HHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCC
Confidence            99999999999999999999988700                0                                     


Q ss_pred             ----------HHHHHHHHHhhcCC---CCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHH
Q psy7936         117 ----------NILFYSILFYAIPG---KNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLH  183 (222)
Q Consensus       117 ----------~~~~~~~la~~~~~---~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~  183 (222)
                                +..|+++|+.|+++   +||+||+|+||+|+|+|.+...           .+..+  ..+||++|+.++.
T Consensus       153 ~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~-----------~~~~~--~~~pe~va~~i~~  219 (244)
T d1yb1a_         153 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS-----------TSLGP--TLEPEEVVNRLMH  219 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH-----------HHHCC--CCCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC-----------ccccC--CCCHHHHHHHHHH
Confidence                      89999999999865   6899999999999999976532           12222  6799999999998


Q ss_pred             HhcCC
Q psy7936         184 CALDE  188 (222)
Q Consensus       184 l~~~~  188 (222)
                      .+..+
T Consensus       220 ~~~~~  224 (244)
T d1yb1a_         220 GILTE  224 (244)
T ss_dssp             HHHTT
T ss_pred             HHhcC
Confidence            76554

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=4.3e-31  Score=217.89  Aligned_cols=164  Identities=20%  Similarity=0.197  Sum_probs=136.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC---------hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEec
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD---------VEKAETTASEIRKHFEVATSEDKKPGEVLIKKL   80 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~---------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (222)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+         .+.++++.+++...             .....+
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~   69 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-------------GGKAVA   69 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-------------TCEEEE
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc-------------cccccc
Confidence            46899999999999999999999999999999998654         45677777777653             235678


Q ss_pred             CCCChhhHHHHHHHHHhhccceeEEEechhhHHh----------------hh----------------------------
Q psy7936          81 DLASFKSIRDCAQDINQTEANVHILINNAVYCIL----------------SN----------------------------  116 (222)
Q Consensus        81 D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l----------------~~----------------------------  116 (222)
                      |+.+.++++++++.+.+.+++||+||||||+...                +|                            
T Consensus        70 d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS  149 (302)
T d1gz6a_          70 NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS  149 (302)
T ss_dssp             ECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             ccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCC
Confidence            9999999999999999999999999999998760                00                            


Q ss_pred             -------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHH
Q psy7936         117 -------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQG  177 (222)
Q Consensus       117 -------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~  177 (222)
                                         +..|+++|+.|++++||+||+|+||++.|.+...++           .++.+  ..+|||+
T Consensus       150 ~~~~~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~-----------~~~~~--~~~Pedv  216 (302)
T d1gz6a_         150 ASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP-----------EDLVE--ALKPEYV  216 (302)
T ss_dssp             HHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC-----------HHHHH--HSCGGGT
T ss_pred             hhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc-----------HhhHh--cCCHHHH
Confidence                               899999999999999999999999999887655443           23344  6899999


Q ss_pred             HHHHHHHhcCCCcccccccccccc
Q psy7936         178 AQTTLHCALDEGAAKETGLYYSDY  201 (222)
Q Consensus       178 a~~i~~l~~~~~~~~~~G~~i~~~  201 (222)
                      |..++|||+ +. .++||+.|..+
T Consensus       217 A~~v~fL~S-~~-a~itG~~i~vd  238 (302)
T d1gz6a_         217 APLVLWLCH-ES-CEENGGLFEVG  238 (302)
T ss_dssp             HHHHHHHTS-TT-CCCCSCEEEEE
T ss_pred             HHHHHHHcC-CC-cCCCCcEEEeC
Confidence            999999974 44 47899999443

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.97  E-value=5.1e-31  Score=213.17  Aligned_cols=175  Identities=21%  Similarity=0.147  Sum_probs=137.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh-HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC----hhhHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS----FKSIR   89 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~v~   89 (222)
                      +++|||||++|||+++|++|+++|++|++++|+.+ ..+++.+++...         .+.+..+.++|+.+    .+.+.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~   72 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA---------RAGSAVLCKGDLSLSSSLLDCCE   72 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---------STTCEEEEECCCSSSTTHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhh---------cCCceEEEecccccchhHHHHHH
Confidence            58999999999999999999999999999999865 467778888776         36677777776654    45667


Q ss_pred             HHHHHHHhhccceeEEEechhhHHh---------------------------hh--------------------------
Q psy7936          90 DCAQDINQTEANVHILINNAVYCIL---------------------------SN--------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l---------------------------~~--------------------------  116 (222)
                      ++++.+.++++++|++|||||+...                           .+                          
T Consensus        73 ~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (266)
T d1mxha_          73 DIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNL  152 (266)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCE
T ss_pred             HHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccc
Confidence            7778888889999999999996530                           00                          


Q ss_pred             --------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHh
Q psy7936         117 --------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWW  170 (222)
Q Consensus       117 --------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  170 (222)
                                                +..+++.+|.+++++|||||+|+||+++|++....   +.........|+++ +
T Consensus       153 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~---~~~~~~~~~~pl~r-~  228 (266)
T d1mxha_         153 SVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ---ETQEEYRRKVPLGQ-S  228 (266)
T ss_dssp             EEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH---HHHHHHHTTCTTTS-C
T ss_pred             cchhhhhccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCH---HHHHHHHhcCCCCC-C
Confidence                                      89999999999999999999999999999875432   12222223345544 1


Q ss_pred             cCChHHHHHHHHHHhcCCCcccccccccc-cccc
Q psy7936         171 MKTPEQGAQTTLHCALDEGAAKETGLYYS-DYKV  203 (222)
Q Consensus       171 ~~~p~e~a~~i~~l~~~~~~~~~~G~~i~-~~~~  203 (222)
                      +.+|||+|+.++||+ ++++.|+||+.|. |+|.
T Consensus       229 ~~~peeva~~v~fL~-s~~s~~itG~~i~vDGG~  261 (266)
T d1mxha_         229 EASAAQIADAIAFLV-SKDAGYITGTTLKVDGGL  261 (266)
T ss_dssp             CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CCCHHHHHHHHHHHh-CchhCCccCCeEEECccH
Confidence            479999999999996 5568899999995 5544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.97  E-value=8.5e-31  Score=213.86  Aligned_cols=183  Identities=14%  Similarity=0.075  Sum_probs=135.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeC-ChhHHHHHHHHHHHhhhhhc----cc----CCCCCeEEEEecCCCCh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACR-DVEKAETTASEIRKHFEVAT----SE----DKKPGEVLIKKLDLASF   85 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~i~~~~~~~~----~~----~~~~~~~~~~~~D~~~~   85 (222)
                      +++|||||++|||+++|+.|+++|++|+++++ +.+..+++.+++........    .+    ......+..+.+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            58999999999999999999999999999876 55778888888876531100    00    00122344566779999


Q ss_pred             hhHHHHHHHHHhhccceeEEEechhhHH------------------------------hhh-------------------
Q psy7936          86 KSIRDCAQDINQTEANVHILINNAVYCI------------------------------LSN-------------------  116 (222)
Q Consensus        86 ~~v~~~~~~i~~~~~~id~li~~ag~~~------------------------------l~~-------------------  116 (222)
                      ++++++++.+.+.++++|+||||||...                              .+|                   
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            9999999999999999999999999742                              000                   


Q ss_pred             ----------------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhh
Q psy7936         117 ----------------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTL  162 (222)
Q Consensus       117 ----------------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  162 (222)
                                                        +..|++.||.|++++|||||+|+||++.+.  ....+ ........
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~--~~~~~-~~~~~~~~  239 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV--DDMPP-AVWEGHRS  239 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG--GGSCH-HHHHHHHT
T ss_pred             HHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccc--ccCCH-HHHHHHHh
Confidence                                              899999999999999999999999986443  22222 11222212


Q ss_pred             HHHH-HHHhcCChHHHHHHHHHHhcCCCcccccccccccccc
Q psy7936         163 GRVL-MWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKV  203 (222)
Q Consensus       163 ~~~~-~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~  203 (222)
                      ..|+ +|  +.+|+|+|+.+.||+ ++++.|+||+.|..+|.
T Consensus       240 ~~pl~~R--~~~peeiA~~v~fL~-S~~s~~itG~~i~VDGG  278 (284)
T d1e7wa_         240 KVPLYQR--DSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGG  278 (284)
T ss_dssp             TCTTTTS--CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             cCCCCCC--CCCHHHHHHHHHHHh-CchhcCccCCeEEECcC
Confidence            3343 55  789999999999997 55688999999954443

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-30  Score=208.98  Aligned_cols=170  Identities=17%  Similarity=0.170  Sum_probs=136.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++             +.......+|+.+...++.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-------------~~~~~~~~~~~~~~~~~~~   68 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-------------GNNCVFAPADVTSEKDVQT   68 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-------------CTTEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-------------CCCcccccccccccccccc
Confidence            579999999999999999999999999999999999999888877766             3467888999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHH----------------------hhh--------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCI----------------------LSN--------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~----------------------l~~--------------------------------  116 (222)
                      ....+......+|.+++|+++..                      -+|                                
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~i  148 (248)
T d2o23a1          69 ALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINT  148 (248)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEE
T ss_pred             cccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEe
Confidence            99999888889999998876544                      000                                


Q ss_pred             ---------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHH-HHHhcCCh
Q psy7936         117 ---------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVL-MWWWMKTP  174 (222)
Q Consensus       117 ---------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p  174 (222)
                                           +.+|+++|+.|++++|||||+|+||+++|+|....++. .........|+ +|  +.+|
T Consensus       149 sS~~~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~-~~~~~~~~~pl~~R--~g~p  225 (248)
T d2o23a1         149 ASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-VCNFLASQVPFPSR--LGDP  225 (248)
T ss_dssp             CCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCSSSCS--CBCH
T ss_pred             cchhhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHH-HHHHHHhcCCCCCC--CcCH
Confidence                                 89999999999999999999999999999998876543 22222233443 45  7899


Q ss_pred             HHHHHHHHHHhcCCCcccccccccc
Q psy7936         175 EQGAQTTLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       175 ~e~a~~i~~l~~~~~~~~~~G~~i~  199 (222)
                      ||+|+.+.||++   ++|+||+.|.
T Consensus       226 eevA~~v~fL~s---~~~itGq~I~  247 (248)
T d2o23a1         226 AEYAHLVQAIIE---NPFLNGEVIR  247 (248)
T ss_dssp             HHHHHHHHHHHH---CTTCCSCEEE
T ss_pred             HHHHHHHHHHHh---CCCCCceEeE
Confidence            999999999984   3699999874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=4.4e-30  Score=206.48  Aligned_cols=159  Identities=27%  Similarity=0.298  Sum_probs=124.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |+.|++|||||++|||+++|++|+++|+  +|++++|+.++++++.+    .         .+.++.+++||+++.++++
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----~---------~~~~~~~~~~Dvs~~~~v~   67 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I---------KDSRVHVLPLTVTCDKSLD   67 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C---------CCTTEEEEECCTTCHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----h---------hCCceEEEEEecCCHHHHH
Confidence            5679999999999999999999999996  79999999988776532    2         3568999999999999999


Q ss_pred             HHHHHHHhhcc--ceeEEEechhhHH-----------------hhh----------------------------------
Q psy7936          90 DCAQDINQTEA--NVHILINNAVYCI-----------------LSN----------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~~~--~id~li~~ag~~~-----------------l~~----------------------------------  116 (222)
                      ++++.+.+.++  ++|+||||||+..                 -+|                                  
T Consensus        68 ~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~  147 (250)
T d1yo6a1          68 TFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAV  147 (250)
T ss_dssp             HHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEE
T ss_pred             HHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccc
Confidence            99999988765  4999999999754                 000                                  


Q ss_pred             -------------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHH
Q psy7936         117 -------------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRV  165 (222)
Q Consensus       117 -------------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  165 (222)
                                                     +..|++.|+.|++++||+||+|+||+|+|+|.....             
T Consensus       148 i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~-------------  214 (250)
T d1yo6a1         148 ITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA-------------  214 (250)
T ss_dssp             EEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------
T ss_pred             cccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC-------------
Confidence                                           789999999999999999999999999999976432             


Q ss_pred             HHHHhcCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         166 LMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       166 ~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                           ..+|||.+..++..+... ....+|++|.+++
T Consensus       215 -----~~~~e~~a~~~~~~~~~~-~~~~sG~f~~~~g  245 (250)
T d1yo6a1         215 -----ALTVEQSTAELISSFNKL-DNSHNGRFFMRNL  245 (250)
T ss_dssp             ---------HHHHHHHHHHHTTC-CGGGTTCEEETTE
T ss_pred             -----CCCHHHHHHHHHHHHhcC-CCCCCeEEECCCC
Confidence                 468999999999987554 4567999986543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.96  E-value=4.2e-30  Score=211.04  Aligned_cols=193  Identities=15%  Similarity=0.093  Sum_probs=139.1

Q ss_pred             CCCCCCEEEEecCCC--chHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccC----CCCCeEEEEec---
Q psy7936          10 SRLDGKTVIITGCNT--GIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSED----KKPGEVLIKKL---   80 (222)
Q Consensus        10 ~~~~~k~~lVtGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~~~---   80 (222)
                      ++|+||++|||||++  |||+++|+.|+++|++|++++|+...............+......    ....++..+..   
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            568999999999875  999999999999999999999987654433333222221111100    00012222221   


Q ss_pred             ---------------CCCChhhHHHHHHHHHhhccceeEEEechhhHH-----h-------------hh-----------
Q psy7936          81 ---------------DLASFKSIRDCAQDINQTEANVHILINNAVYCI-----L-------------SN-----------  116 (222)
Q Consensus        81 ---------------D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~-----l-------------~~-----------  116 (222)
                                     |.++..+++++++.+.+.+++||+||||||...     +             +|           
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                           235667889999999999999999999998743     0             00           


Q ss_pred             -----------------------------------HHHHHHHHHhhcC-CCCeEEEEEeCCcccCCcCCCCCCC-CCcch
Q psy7936         117 -----------------------------------NILFYSILFYAIP-GKNVNVYAVHPGIVKTELGRYMDDT-YFPGA  159 (222)
Q Consensus       117 -----------------------------------~~~~~~~la~~~~-~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~  159 (222)
                                                         +..+++.++.+++ ++|||||+|+||+++|+|....... .+...
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~  243 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEY  243 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHH
T ss_pred             HHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHH
Confidence                                               7899999999996 6799999999999999998765422 22223


Q ss_pred             hhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccccccccccc
Q psy7936         160 RTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       160 ~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      .....|++|  +.+|||+|..++||+ ++.+.|+||+.|..++...
T Consensus       244 ~~~~~PlgR--~~~peevA~~v~fL~-S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         244 SYNNAPIQK--TLTADEVGNAAAFLV-SPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHSSSCC--CBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTGG
T ss_pred             HHhCCCCCC--CCCHHHHHHHHHHHh-CchhcCCcCceEEECcCHh
Confidence            334456666  889999999999996 5678999999995444443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.96  E-value=1e-29  Score=205.86  Aligned_cols=180  Identities=15%  Similarity=0.130  Sum_probs=138.6

Q ss_pred             CCCCEEEEecC--CCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGC--NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGa--s~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |+||++|||||  ++|||+++|++|+++|++|++++|+.+++.   +.+.+.         .+.+...++||+++.+++.
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~---~~~~~~---------~~~~~~~~~~dv~~~~~~~   71 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI---QRITDR---------LPAKAPLLELDVQNEEHLA   71 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHH---HHHHTT---------SSSCCCEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHH---HHHHHH---------cCCceeeEeeecccccccc
Confidence            78999999995  579999999999999999999999987543   223222         2557788999999999999


Q ss_pred             HHHHHHHhh---ccceeEEEechhhHHhhh--------------------------------------------------
Q psy7936          90 DCAQDINQT---EANVHILINNAVYCILSN--------------------------------------------------  116 (222)
Q Consensus        90 ~~~~~i~~~---~~~id~li~~ag~~~l~~--------------------------------------------------  116 (222)
                      .+++.+.+.   ++++|++|||+|......                                                  
T Consensus        72 ~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~  151 (268)
T d2h7ma1          72 SLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS  151 (268)
T ss_dssp             HHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS
T ss_pred             cccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc
Confidence            998888665   468999999999653000                                                  


Q ss_pred             ---------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchh-----------hhHHHHHHHh
Q psy7936         117 ---------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGAR-----------TLGRVLMWWW  170 (222)
Q Consensus       117 ---------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-----------~~~~~~~~~~  170 (222)
                                     +..+++.++.|++++|||||+|+||+++|+|.............           ....|+++ +
T Consensus       152 ~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~r-r  230 (268)
T d2h7ma1         152 RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGW-N  230 (268)
T ss_dssp             SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCC-C
T ss_pred             ccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCC-C
Confidence                           89999999999999999999999999999987654322111110           01112221 1


Q ss_pred             cCChHHHHHHHHHHhcCCCcccccccccccccccc
Q psy7936         171 MKTPEQGAQTTLHCALDEGAAKETGLYYSDYKVAK  205 (222)
Q Consensus       171 ~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~~~~  205 (222)
                      ..+|+|+|+.+.||+ ++...++||+.|..++...
T Consensus       231 ~~~p~dva~~v~fL~-Sd~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         231 MKDATPVAKTVCALL-SDWLPATTGDIIYADGGAH  264 (268)
T ss_dssp             TTCCHHHHHHHHHHH-SSSCTTCCSEEEEESTTGG
T ss_pred             CCCHHHHHHHHHHHh-CchhcCccCCEEEECcCcc
Confidence            578999999999997 6678899999995554443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=3.7e-29  Score=200.85  Aligned_cols=159  Identities=21%  Similarity=0.308  Sum_probs=126.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHH---hCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLY---GIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~---~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|++|||||++|||+++|++|+   +.|++|++++|+.+.++++.+..+.           +.++.+++||++|.+++++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~~~Dvs~~~~v~~   70 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-----------HSNIHILEIDLRNFDAYDK   70 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-----------CTTEEEEECCTTCGGGHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc-----------CCcEEEEEEEeccHHHHHH
Confidence            4799999999999999999996   4789999999999988877654433           4588999999999999999


Q ss_pred             HHHHHHh--hccceeEEEechhhHH-----------------hhh-----------------------------------
Q psy7936          91 CAQDINQ--TEANVHILINNAVYCI-----------------LSN-----------------------------------  116 (222)
Q Consensus        91 ~~~~i~~--~~~~id~li~~ag~~~-----------------l~~-----------------------------------  116 (222)
                      +++.+.+  .++++|+||||||+..                 -+|                                   
T Consensus        71 ~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii  150 (248)
T d1snya_          71 LVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAII  150 (248)
T ss_dssp             HHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEE
T ss_pred             HHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccc
Confidence            9998854  6789999999999754                 000                                   


Q ss_pred             --------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHh
Q psy7936         117 --------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWW  170 (222)
Q Consensus       117 --------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  170 (222)
                                                +..|++.++.+++++||+||+|+||+++|+|.....+                 
T Consensus       151 ~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~-----------------  213 (248)
T d1snya_         151 NMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP-----------------  213 (248)
T ss_dssp             EECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS-----------------
T ss_pred             cccccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC-----------------
Confidence                                      8999999999999999999999999999999876542                 


Q ss_pred             cCChHHHHHHHHHHhcCCCccccccccccccc
Q psy7936         171 MKTPEQGAQTTLHCALDEGAAKETGLYYSDYK  202 (222)
Q Consensus       171 ~~~p~e~a~~i~~l~~~~~~~~~~G~~i~~~~  202 (222)
                       .++++.+..++.++... ....+|++|.++|
T Consensus       214 -~~~~~~~~~i~~~i~~l-~~~~tG~~i~~dG  243 (248)
T d1snya_         214 -LDVPTSTGQIVQTISKL-GEKQNGGFVNYDG  243 (248)
T ss_dssp             -BCHHHHHHHHHHHHHHC-CGGGTTCEECTTS
T ss_pred             -CCchHHHHHHHHHHHhc-CccCCCcEEEECC
Confidence             23334444444443322 2356999996554

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.95  E-value=7.8e-29  Score=199.33  Aligned_cols=159  Identities=17%  Similarity=0.137  Sum_probs=111.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |++|||||++|||+++|+.|+++|++|++++|+.+.                           ..+|+.+....+.....
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~---------------------------~~~d~~~~~~~~~~~~~   54 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE---------------------------VIADLSTAEGRKQAIAD   54 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS---------------------------EECCTTSHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH---------------------------HHHHhcCHHHHHHHHHH
Confidence            799999999999999999999999999999987541                           23577777777666544


Q ss_pred             HHhh-ccceeEEEechhhHHhh---------h------------------------------------------------
Q psy7936          95 INQT-EANVHILINNAVYCILS---------N------------------------------------------------  116 (222)
Q Consensus        95 i~~~-~~~id~li~~ag~~~l~---------~------------------------------------------------  116 (222)
                      +... .+.+|++|||||+....         |                                                
T Consensus        55 ~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  134 (257)
T d1fjha_          55 VLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAG  134 (257)
T ss_dssp             HHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHT
T ss_pred             HHHHhCCCCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCC
Confidence            4333 35688888887643200         0                                                


Q ss_pred             ---------------------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCC-CCcch-hhhHHHHH
Q psy7936         117 ---------------------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDT-YFPGA-RTLGRVLM  167 (222)
Q Consensus       117 ---------------------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~-~~~~~~~~  167 (222)
                                                 +..|+++||.|++++|||||+|+||+++|+|.+..... ..... .....|++
T Consensus       135 ~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Plg  214 (257)
T d1fjha_         135 EEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG  214 (257)
T ss_dssp             CHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTT
T ss_pred             cEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCC
Confidence                                       78999999999999999999999999999998765433 22221 11224777


Q ss_pred             HHhcCChHHHHHHHHHHhcCCCccccccccc-ccccc
Q psy7936         168 WWWMKTPEQGAQTTLHCALDEGAAKETGLYY-SDYKV  203 (222)
Q Consensus       168 ~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i-~~~~~  203 (222)
                      |  +.+|+|+|+.+.||+ ++++.|+||+.| .|+|.
T Consensus       215 R--~g~p~eva~~v~fL~-S~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         215 R--RAEPSEMASVIAFLM-SPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             S--CCCTHHHHHHHHHHT-SGGGTTCCSCEEEESTTH
T ss_pred             C--CcCHHHHHHHHHHHh-CchhCCccCceEEeCCCc
Confidence            7  899999999999996 667889999999 45554

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.6e-28  Score=196.88  Aligned_cols=176  Identities=20%  Similarity=0.156  Sum_probs=127.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEE---EEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKV---IMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v---~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +|++|||||++|||+++|+.|++.|++|   +++.|+.+...++.+..+...       ..+.++.++.||+++.+++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~Dv~~~~~~~~   74 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALA-------CPPGSLETLQLDVRDSKSVAA   74 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTT-------CCTTSEEEEECCTTCHHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHh-------ccCCceEEEeccccchHhhhh
Confidence            6899999999999999999999999864   445666655555544444321       146789999999999999999


Q ss_pred             HHHHHHhhccceeEEEechhhHHh----------------hh--------------------------------------
Q psy7936          91 CAQDINQTEANVHILINNAVYCIL----------------SN--------------------------------------  116 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l----------------~~--------------------------------------  116 (222)
                      +++++.+  +++|++|||+|....                +|                                      
T Consensus        75 ~~~~~~~--g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~  152 (285)
T d1jtva_          75 ARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN  152 (285)
T ss_dssp             HHHTCTT--SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC
T ss_pred             hhhhccc--cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCc
Confidence            9988744  799999999988770                00                                      


Q ss_pred             ---------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCC-------c-------chhhhHHHHHHHhcCC
Q psy7936         117 ---------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYF-------P-------GARTLGRVLMWWWMKT  173 (222)
Q Consensus       117 ---------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-------~-------~~~~~~~~~~~~~~~~  173 (222)
                               +..|+++|+.|++++||+||+|+||+|+|+|.......+.       .       .......+.......+
T Consensus       153 ~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
T d1jtva_         153 DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQN  232 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCC
Confidence                     8999999999999999999999999999999876543210       0       0000111222233789


Q ss_pred             hHHHHHHHHHHhcCC--Cccccccccc
Q psy7936         174 PEQGAQTTLHCALDE--GAAKETGLYY  198 (222)
Q Consensus       174 p~e~a~~i~~l~~~~--~~~~~~G~~i  198 (222)
                      |||+|+.+++++.++  ...|++|+.+
T Consensus       233 PeeVA~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         233 PEEVAEVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHHHHHhCCCCCeEEecHHHH
Confidence            999999999998764  3467888765

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=4.3e-28  Score=202.19  Aligned_cols=190  Identities=15%  Similarity=0.079  Sum_probs=135.9

Q ss_pred             CCCEEEEec--CCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCC--CCCeEEEE----------
Q psy7936          13 DGKTVIITG--CNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDK--KPGEVLIK----------   78 (222)
Q Consensus        13 ~~k~~lVtG--as~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~----------   78 (222)
                      ++|++||||  +++|||++||+.|+++|++|++++++...............+.......  ........          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  5589999999999999999999999887655554443332221111100  01112222          


Q ss_pred             ----------ecCCCChhhHHHHHHHHHhhccceeEEEechhhHH-----hh-------------h--------------
Q psy7936          79 ----------KLDLASFKSIRDCAQDINQTEANVHILINNAVYCI-----LS-------------N--------------  116 (222)
Q Consensus        79 ----------~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~-----l~-------------~--------------  116 (222)
                                .+|+.+.++++.+++.+.+.+++||++|||+|...     +.             |              
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      34677888999999999999999999999998543     00             0              


Q ss_pred             --------------------------------HHHHHHHHHhhcCC-CCeEEEEEeCCcccCCcCCCCCC----------
Q psy7936         117 --------------------------------NILFYSILFYAIPG-KNVNVYAVHPGIVKTELGRYMDD----------  153 (222)
Q Consensus       117 --------------------------------~~~~~~~la~~~~~-~gI~v~~v~PG~v~T~~~~~~~~----------  153 (222)
                                                      +.+|++.||.|+++ +|||||+|+||+|+|++.+..+.          
T Consensus       161 m~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~  240 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN  240 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-----------
T ss_pred             cccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhh
Confidence                                            89999999999986 69999999999999965443210          


Q ss_pred             ----------------------------C------CCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCCcccccccccc
Q psy7936         154 ----------------------------T------YFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEGAAKETGLYYS  199 (222)
Q Consensus       154 ----------------------------~------~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~~~~~~G~~i~  199 (222)
                                                  .      ..........|++|  ..+|||+|..++||+ ++.++|+||+.|.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R--~~~pedvA~~v~fLa-Sd~s~~iTGq~i~  317 (329)
T d1uh5a_         241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQ--KLLSTDIGSVASFLL-SRESRAITGQTIY  317 (329)
T ss_dssp             -------------------------------CHHHHHHHHHHHHSSSCS--CCCHHHHHHHHHHHH-SGGGTTCCSCEEE
T ss_pred             hhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCC--CcCHHHHHHHHHHHh-CchhCCccCCeEE
Confidence                                        0      00011112335666  889999999999997 5678999999995


Q ss_pred             cccccc
Q psy7936         200 DYKVAK  205 (222)
Q Consensus       200 ~~~~~~  205 (222)
                      .++...
T Consensus       318 VDGG~~  323 (329)
T d1uh5a_         318 VDNGLN  323 (329)
T ss_dssp             ESTTGG
T ss_pred             ECCCcc
Confidence            544443

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.6e-27  Score=191.28  Aligned_cols=157  Identities=20%  Similarity=0.200  Sum_probs=134.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...         .+..+..+.+|+++...+..+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~   82 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL---------GAASAHYIAGTMEDMTFAEQF   82 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------TCSEEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhh---------hcccchhhhhhhhhHHHHHHH
Confidence            89999999999999999999999999999999999999999999888766         477899999999999999999


Q ss_pred             HHHHHhhccceeEEEechhhHH----------------hhh---------------------------------------
Q psy7936          92 AQDINQTEANVHILINNAVYCI----------------LSN---------------------------------------  116 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~----------------l~~---------------------------------------  116 (222)
                      .+.+.+.++.+|+++||||...                .+|                                       
T Consensus        83 ~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~  162 (269)
T d1xu9a_          83 VAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAA  162 (269)
T ss_dssp             HHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHH
T ss_pred             HHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchH
Confidence            9999999999999999998776                000                                       


Q ss_pred             -------HHHHHHHHHhhcC--CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 -------NILFYSILFYAIP--GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 -------~~~~~~~la~~~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                             +..|+++|+.|++  +.||+||+|+||+|+|+|.........         ...  ..+||++|+.++.....
T Consensus       163 Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~---------~~~--~~~~e~~a~~i~~~~~~  231 (269)
T d1xu9a_         163 YSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV---------HMQ--AAPKEECALEIIKGGAL  231 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGG---------GGG--CBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCc---------ccc--CCCHHHHHHHHHHHhhc
Confidence                   8999999999986  457999999999999999765432100         111  56899999999886544


Q ss_pred             C
Q psy7936         188 E  188 (222)
Q Consensus       188 ~  188 (222)
                      .
T Consensus       232 ~  232 (269)
T d1xu9a_         232 R  232 (269)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=3.2e-28  Score=193.84  Aligned_cols=163  Identities=17%  Similarity=0.197  Sum_probs=121.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      .|++|||||++|||+++|+.|+++|++|++++|+++                      ..+....++|+++...+..+..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~----------------------~~~~~~~~~d~~~~~~~~~~~~   58 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----------------------GEDLIYVEGDVTREEDVRRAVA   58 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----------------------SSSSEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc----------------------cccceEeeccccchhhhHHHHH
Confidence            389999999999999999999999999999999864                      2355677888888888877777


Q ss_pred             HHHhhccceeEEEechhhHHh--------------------hh-------------------------------------
Q psy7936          94 DINQTEANVHILINNAVYCIL--------------------SN-------------------------------------  116 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l--------------------~~-------------------------------------  116 (222)
                      ....... .+.++++++....                    .|                                     
T Consensus        59 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~  137 (241)
T d1uaya_          59 RAQEEAP-LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA  137 (241)
T ss_dssp             HHHHHSC-EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH
T ss_pred             hhhcccc-ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhh
Confidence            6655543 3444444433220                    00                                     


Q ss_pred             ----------------HHHHHHHHHhhcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHH-HHHhcCChHHHHH
Q psy7936         117 ----------------NILFYSILFYAIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVL-MWWWMKTPEQGAQ  179 (222)
Q Consensus       117 ----------------~~~~~~~la~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~e~a~  179 (222)
                                      +.+|+++||.|++++|||||+|+||+++|+|............. ...|+ +|  +.+|||+|+
T Consensus       138 ~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~-~~~~~~~R--~g~pedvA~  214 (241)
T d1uaya_         138 FEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLA-AQVPFPPR--LGRPEEYAA  214 (241)
T ss_dssp             HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHH-TTCCSSCS--CCCHHHHHH
T ss_pred             ccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHH-hcCCCCCC--CcCHHHHHH
Confidence                            89999999999999999999999999999998765432111111 12222 44  789999999


Q ss_pred             HHHHHhcCCCccccccccc-ccccccc
Q psy7936         180 TTLHCALDEGAAKETGLYY-SDYKVAK  205 (222)
Q Consensus       180 ~i~~l~~~~~~~~~~G~~i-~~~~~~~  205 (222)
                      .+.||+++   .|+||+.| .++|..+
T Consensus       215 ~v~fL~s~---~~iTG~~i~VDGG~~m  238 (241)
T d1uaya_         215 LVLHILEN---PMLNGEVVRLDGALRM  238 (241)
T ss_dssp             HHHHHHHC---TTCCSCEEEESTTCCC
T ss_pred             HHHHHHhC---CCCCCCEEEECCcccC
Confidence            99999853   59999999 5555544

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=3.3e-26  Score=182.18  Aligned_cols=154  Identities=12%  Similarity=-0.006  Sum_probs=124.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +||++|||||++|||+++|+.|+++|++|++++++...                    .........+|..+.+++..+.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~   60 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE--------------------EASASVIVKMTDSFTEQADQVT   60 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT--------------------TSSEEEECCCCSCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc--------------------cccccceeecccCcHHHHHHHH
Confidence            48999999999999999999999999999999987642                    1335667788988888888887


Q ss_pred             HHHHhhc--cceeEEEechhhHHh-----------------hh-------------------------------------
Q psy7936          93 QDINQTE--ANVHILINNAVYCIL-----------------SN-------------------------------------  116 (222)
Q Consensus        93 ~~i~~~~--~~id~li~~ag~~~l-----------------~~-------------------------------------  116 (222)
                      ..+.+.+  +++|+||||||....                 +|                                     
T Consensus        61 ~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~  140 (236)
T d1dhra_          61 AEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMI  140 (236)
T ss_dssp             HHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBH
T ss_pred             HHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCc
Confidence            7776654  479999999996430                 00                                     


Q ss_pred             --------HHHHHHHHHhhcC--CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhc
Q psy7936         117 --------NILFYSILFYAIP--GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCAL  186 (222)
Q Consensus       117 --------~~~~~~~la~~~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~  186 (222)
                              +..|+++|+.|++  ++||+||+|+||+++|+|.+...+....         .+  +.+|+++|+.+.+|+ 
T Consensus       141 ~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~---------~~--~~~pe~va~~~~~l~-  208 (236)
T d1dhra_         141 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADF---------SS--WTPLEFLVETFHDWI-  208 (236)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCG---------GG--SEEHHHHHHHHHHHH-
T ss_pred             ccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchh---------hc--CCCHHHHHHHHHHHh-
Confidence                    8999999999998  5799999999999999997754432221         12  678999999999996 


Q ss_pred             CCCccccccccc
Q psy7936         187 DEGAAKETGLYY  198 (222)
Q Consensus       187 ~~~~~~~~G~~i  198 (222)
                      ++...+++|+.+
T Consensus       209 s~~~~~i~G~~i  220 (236)
T d1dhra_         209 TGNKRPNSGSLI  220 (236)
T ss_dssp             TTTTCCCTTCEE
T ss_pred             CCCccCCCCCeE
Confidence            445679999866

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.91  E-value=5.9e-25  Score=174.74  Aligned_cols=155  Identities=11%  Similarity=0.008  Sum_probs=123.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      .+++|||||++|||+++|++|+++|++|++++|+++.                    .........+|+.+.+......+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~   61 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND--------------------QADSNILVDGNKNWTEQEQSILE   61 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT--------------------TSSEEEECCTTSCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchh--------------------cccccceeccccCchhHHHHHHH
Confidence            3457999999999999999999999999999998752                    12345667788888887777666


Q ss_pred             HHHh--hccceeEEEechhhHHh-----------------hh--------------------------------------
Q psy7936          94 DINQ--TEANVHILINNAVYCIL-----------------SN--------------------------------------  116 (222)
Q Consensus        94 ~i~~--~~~~id~li~~ag~~~l-----------------~~--------------------------------------  116 (222)
                      .+..  .+++||+||||||+...                 +|                                      
T Consensus        62 ~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~  141 (235)
T d1ooea_          62 QTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIG  141 (235)
T ss_dssp             HHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHH
T ss_pred             HHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccc
Confidence            6555  45899999999997540                 00                                      


Q ss_pred             -------HHHHHHHHHhhcC--CCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcC
Q psy7936         117 -------NILFYSILFYAIP--GKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALD  187 (222)
Q Consensus       117 -------~~~~~~~la~~~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~  187 (222)
                             +.+|+++|+.|++  +.+|+||+|+||+++|+|.+...+....         .+  +.+|+++++.+++++.+
T Consensus       142 Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~~~---------~~--~~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         142 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADH---------SS--WTPLSFISEHLLKWTTE  210 (235)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCG---------GG--CBCHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCCcc---------cc--CCCHHHHHHHHHHHhcC
Confidence                   8999999999998  4789999999999999998755432211         12  67999999999877778


Q ss_pred             CCcccccccccc
Q psy7936         188 EGAAKETGLYYS  199 (222)
Q Consensus       188 ~~~~~~~G~~i~  199 (222)
                      +...+++|+.+.
T Consensus       211 ~~~~~~tG~~i~  222 (235)
T d1ooea_         211 TSSRPSSGALLK  222 (235)
T ss_dssp             GGGCCCTTCEEE
T ss_pred             ccccCCCceEEE
Confidence            778889999884

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.83  E-value=8.7e-21  Score=152.27  Aligned_cols=158  Identities=15%  Similarity=0.096  Sum_probs=117.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh---hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV---EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++++|||||++|||+++|++|+++|+ +|++++|+.   +..+++.++++.          .+.++.++.||++|.+++
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~----------~g~~v~~~~~Dv~d~~~~   77 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA----------LGARTTVAACDVTDRESV   77 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH----------TTCEEEEEECCTTCHHHH
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh----------ccccccccccccchHHHH
Confidence            346999999999999999999999998 799999985   345666666654          367999999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHhh----------------h------------------------------------
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCILS----------------N------------------------------------  116 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l~----------------~------------------------------------  116 (222)
                      +++++.+.+. +++|.+|||+|.....                |                                    
T Consensus        78 ~~~~~~i~~~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~  156 (259)
T d2fr1a1          78 RELLGGIGDD-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGG  156 (259)
T ss_dssp             HHHHHTSCTT-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTT
T ss_pred             HHhhcccccc-ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHH
Confidence            9999988664 6899999999977700                0                                    


Q ss_pred             ---HHHHHHHHHhhcCCCCeEEEEEeCCcccCC-cCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCCC
Q psy7936         117 ---NILFYSILFYAIPGKNVNVYAVHPGIVKTE-LGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDEG  189 (222)
Q Consensus       117 ---~~~~~~~la~~~~~~gI~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~~  189 (222)
                         ...+...|+.++...||++++|+||++.+. |....... ....      .+. ...+|+++++.+..++..+.
T Consensus       157 YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~~~-~~~~------~G~-~~~~~~~~~~~l~~~l~~~~  225 (259)
T d2fr1a1         157 YAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVAD-RFRR------HGV-IEMPPETACRALQNALDRAE  225 (259)
T ss_dssp             THHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------CTT------TTE-ECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccchHHH-HHHh------cCC-CCCCHHHHHHHHHHHHhCCC
Confidence               566777888888889999999999987544 43322111 1000      000 15689999999998876553

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.62  E-value=4.4e-16  Score=119.15  Aligned_cols=85  Identities=22%  Similarity=0.373  Sum_probs=74.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+|+||+++||||++|||+++++.|+++|++|++++|+.++++++.+.+....           ++....+|+++.++++
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~~~~~~   87 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-----------KVNVTAAETADDASRA   87 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-----------TCCCEEEECCSHHHHH
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-----------chhhhhhhcccHHHHH
Confidence            57899999999999999999999999999999999999999999999887643           4456789999998887


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +++       +++|+||||||..
T Consensus        88 ~~~-------~~iDilin~Ag~g  103 (191)
T d1luaa1          88 EAV-------KGAHFVFTAGAIG  103 (191)
T ss_dssp             HHT-------TTCSEEEECCCTT
T ss_pred             HHh-------cCcCeeeecCccc
Confidence            654       5689999999864

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.9e-12  Score=99.40  Aligned_cols=147  Identities=13%  Similarity=0.066  Sum_probs=98.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |+.|+++||||||+||.+++++|+++|++|.++.|+.+++...                ....+.++.+|+++.+++.++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~----------------~~~~~~~~~gD~~d~~~l~~a   64 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE----------------GPRPAHVVVGDVLQAADVDKT   64 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS----------------SCCCSEEEESCTTSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc----------------cccccccccccccchhhHHHH
Confidence            4578899999999999999999999999999999998864321                134577899999999988776


Q ss_pred             HHHHHhhccceeEEEechhhHH--------------hhh----------------------------HHHHHH--H-HHh
Q psy7936          92 AQDINQTEANVHILINNAVYCI--------------LSN----------------------------NILFYS--I-LFY  126 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~--------------l~~----------------------------~~~~~~--~-la~  126 (222)
                      ++       ..|++|+++|...              +..                            ...+.+  . ...
T Consensus        65 l~-------~~d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~  137 (205)
T d1hdoa_          65 VA-------GQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHK  137 (205)
T ss_dssp             HT-------TCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHH
T ss_pred             hc-------CCCEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHH
Confidence            54       4599999987643              000                            111111  1 112


Q ss_pred             hcCCCCeEEEEEeCCcccCCcCCCCCCCCCcchhhhHHHHHHHhcCChHHHHHHHHHHhcCC
Q psy7936         127 AIPGKNVNVYAVHPGIVKTELGRYMDDTYFPGARTLGRVLMWWWMKTPEQGAQTTLHCALDE  188 (222)
Q Consensus       127 ~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~a~~i~~l~~~~  188 (222)
                      .+...|+....|.||.+................       ....+.+.+|+|+.++.++.++
T Consensus       138 ~l~~~~~~~tiirp~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~DvA~~~~~~l~~~  192 (205)
T d1hdoa_         138 VLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGR-------GPSRVISKHDLGHFMLRCLTTD  192 (205)
T ss_dssp             HHHHTCSEEEEECCSEEECCCCCSCCEEESSSC-------SSCSEEEHHHHHHHHHHTTSCS
T ss_pred             HHHhcCCceEEEecceecCCCCcccEEEeeCCC-------CCCCcCCHHHHHHHHHHHhCCC
Confidence            244578999999999774332211110000000       0001568999999999997655

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.15  E-value=3e-11  Score=93.30  Aligned_cols=76  Identities=20%  Similarity=0.146  Sum_probs=60.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      -+++|||||+|.||.+++++|++.|+  .|+...|+++....+                 ...+.++.+|+.+.+++.++
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-----------------~~~~~~~~~d~~~~~~~~~~   65 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----------------GGEADVFIGDITDADSINPA   65 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----------------TCCTTEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-----------------cCCcEEEEeeeccccccccc
Confidence            36999999999999999999999996  566677888654322                 33567889999999988876


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++       .+|.+||+++...
T Consensus        66 ~~-------~~d~vi~~a~~~~   80 (252)
T d2q46a1          66 FQ-------GIDALVILTSAVP   80 (252)
T ss_dssp             HT-------TCSEEEECCCCCC
T ss_pred             cc-------cceeeEEEEeecc
Confidence            54       4699999987543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.05  E-value=1.8e-10  Score=95.20  Aligned_cols=84  Identities=15%  Similarity=0.133  Sum_probs=62.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh-----HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-----KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |++|||||||-||..++++|.+.|++|++++|...     +++.+......          ...++.++++|++|.+++.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dl~d~~~~~   71 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT----------CNPKFHLHYGDLSDTSNLT   71 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-------------------------------CCEEECCCCSSCHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh----------cCCCeEEEEeecCCHHHHH
Confidence            78999999999999999999999999999998543     22222222111          2458899999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhHH
Q psy7936          90 DCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ++++.+     .+|++||+|+...
T Consensus        72 ~~~~~~-----~~d~v~h~aa~~~   90 (357)
T d1db3a_          72 RILREV-----QPDEVYNLGAMSH   90 (357)
T ss_dssp             HHHHHH-----CCSEEEECCCCCT
T ss_pred             HHHhcc-----CCCEEEEeecccc
Confidence            998876     6899999998743

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.01  E-value=1.5e-10  Score=95.18  Aligned_cols=85  Identities=16%  Similarity=0.117  Sum_probs=69.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +++|++|||||+|.||..+++.|.+.|++|++++|+......+.+....           ...+.++.+|++|.+.+.++
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-----------~~~i~~~~~Dl~d~~~l~~~   74 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV-----------ADGMQSEIGDIRDQNKLLES   74 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT-----------TTTSEEEECCTTCHHHHHHH
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc-----------ccCCeEEEeeccChHhhhhh
Confidence            4789999999999999999999999999999999987654444333221           33678899999999999887


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+..     .+|+++|.|+..
T Consensus        75 ~~~~-----~~~~v~~~aa~~   90 (356)
T d1rkxa_          75 IREF-----QPEIVFHMAAQP   90 (356)
T ss_dssp             HHHH-----CCSEEEECCSCC
T ss_pred             hhhc-----hhhhhhhhhccc
Confidence            7765     789999999754

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.99  E-value=7.7e-10  Score=92.26  Aligned_cols=84  Identities=14%  Similarity=0.125  Sum_probs=64.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh----------------hHHHHHHHHHHHhhhhhcccCCCCCeEEE
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV----------------EKAETTASEIRKHFEVATSEDKKPGEVLI   77 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~----------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   77 (222)
                      |+++|||||+|-||.+++++|++.|++|+++|.-.                ....+....+...         .+.++.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~   71 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL---------TGKSIEL   71 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH---------HCCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh---------cCCCcEE
Confidence            68899999999999999999999999999987211                1122222223222         2457899


Q ss_pred             EecCCCChhhHHHHHHHHHhhccceeEEEechhh
Q psy7936          78 KKLDLASFKSIRDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        78 ~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      +++|++|.+.+.++++..     ++|++||.|+.
T Consensus        72 ~~~Dl~d~~~l~~~~~~~-----~~d~ViHlAa~  100 (393)
T d1i24a_          72 YVGDICDFEFLAESFKSF-----EPDSVVHFGEQ  100 (393)
T ss_dssp             EESCTTSHHHHHHHHHHH-----CCSEEEECCSC
T ss_pred             EEccCCCHHHHHHHHHhh-----cchheeccccc
Confidence            999999999999988865     78999999964

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.97  E-value=3.9e-10  Score=91.92  Aligned_cols=85  Identities=20%  Similarity=0.166  Sum_probs=64.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh-----hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV-----EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .|++|||||||-||..+++.|++.|++|+.++|..     .++..+.......         ....+.++.+|+++..++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~Di~~~~~~   71 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV---------NKALMKLHYADLTDASSL   71 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-----------------CCEEEEECCTTCHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc---------cccceEEEEccccCHHHH
Confidence            48999999999999999999999999999999843     2222222221111         245788999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .+.++..     ++|++||+|+..
T Consensus        72 ~~~~~~~-----~~D~Vih~Aa~~   90 (339)
T d1n7ha_          72 RRWIDVI-----KPDEVYNLAAQS   90 (339)
T ss_dssp             HHHHHHH-----CCSEEEECCSCC
T ss_pred             HHHHhhh-----ccchhhhccccc
Confidence            9887754     789999999763

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.97  E-value=6.1e-10  Score=91.17  Aligned_cols=82  Identities=18%  Similarity=0.159  Sum_probs=63.1

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      ++|||||+|.||..+++.|++.|++|++++|-..........++..         ...++.++++|++|.+.+.++++..
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~l~~~~~~~   72 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL---------GGKHPTFVEGDIRNEALMTEILHDH   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH---------HTSCCEEEECCTTCHHHHHHHHHHT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh---------cCCCCEEEEeecCCHHHHHHHHhcc
Confidence            4999999999999999999999999999986332211222222222         1457889999999999999887764


Q ss_pred             HhhccceeEEEechhh
Q psy7936          96 NQTEANVHILINNAVY  111 (222)
Q Consensus        96 ~~~~~~id~li~~ag~  111 (222)
                           .+|++||+|+.
T Consensus        73 -----~~d~ViHlAa~   83 (338)
T d1udca_          73 -----AIDTVIHFAGL   83 (338)
T ss_dssp             -----TCSEEEECCSC
T ss_pred             -----CCCEEEECCCc
Confidence                 68999999974

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.96  E-value=7e-10  Score=91.08  Aligned_cols=83  Identities=19%  Similarity=0.208  Sum_probs=62.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-HHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-AETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      |++|||||+|-||..++++|++.|++|+++++.... ..... .....         ...++.++++|++|.+++..++.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~-~~~~~---------~~~~v~~~~~Dl~d~~~l~~~~~   71 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA-RLEVL---------TKHHIPFYEVDLCDRKGLEKVFK   71 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH-HHHHH---------HTSCCCEEECCTTCHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH-hHHhh---------cccCCeEEEeecCCHHHHHHHHh
Confidence            789999999999999999999999999998763221 11111 11111         13467889999999999998876


Q ss_pred             HHHhhccceeEEEechhhH
Q psy7936          94 DINQTEANVHILINNAVYC  112 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~  112 (222)
                      ..     ++|++||+|+..
T Consensus        72 ~~-----~~d~VihlAa~~   85 (347)
T d1z45a2          72 EY-----KIDSVIHFAGLK   85 (347)
T ss_dssp             HS-----CCCEEEECCSCC
T ss_pred             cc-----CCCEEEEccccc
Confidence            54     789999999864

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.86  E-value=2.2e-09  Score=87.90  Aligned_cols=84  Identities=15%  Similarity=0.118  Sum_probs=62.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +||++|||||+|.||..++++|+++|++|+++.|+......+.+......        .......+..|+.+..++..++
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY--------PGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS--------TTTEEEEECSCTTSTTTTTTTT
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccc--------cccccEEEeccccchhhhhhhc
Confidence            58999999999999999999999999999999999877666654433321        2334455667888777665543


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .       ..|.++|+++.
T Consensus        82 ~-------~~~~v~~~a~~   93 (342)
T d1y1pa1          82 K-------GAAGVAHIASV   93 (342)
T ss_dssp             T-------TCSEEEECCCC
T ss_pred             c-------cchhhhhhccc
Confidence            2       35677777655

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=2.4e-09  Score=87.63  Aligned_cols=85  Identities=14%  Similarity=0.132  Sum_probs=63.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeC------ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACR------DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      |++|||||+|-||.+++++|++.|++|+++++      +.....+..+.+...         .+.++.++++|++|.+.+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~l   73 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL---------TGRSVEFEEMDILDQGAL   73 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH---------HTCCCEEEECCTTCHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh---------cCCCcEEEEeeccccccc
Confidence            67899999999999999999999999999874      211112222222222         255789999999999999


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .+++...     .+++++|.|+...
T Consensus        74 ~~~~~~~-----~~~~i~h~Aa~~~   93 (346)
T d1ek6a_          74 QRLFKKY-----SFMAVIHFAGLKA   93 (346)
T ss_dssp             HHHHHHC-----CEEEEEECCSCCC
T ss_pred             ccccccc-----ccccccccccccC
Confidence            8877653     6889999997543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.86  E-value=5.7e-09  Score=84.46  Aligned_cols=82  Identities=13%  Similarity=0.029  Sum_probs=63.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCC-hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRD-VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++|||||+|.||..++++|+++|++|+++++- .....+-.+.+..           ..++.++.+|+++.+++.++++.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-----------~~~~~~i~~Di~~~~~l~~~~~~   70 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-----------LGNFEFVHGDIRNKNDVTRLITK   70 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-----------TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-----------cCCcEEEEcccCCHHHHHHHHHh
Confidence            58999999999999999999999999998742 2212222222322           34788999999999999988776


Q ss_pred             HHhhccceeEEEechhhHH
Q psy7936          95 INQTEANVHILINNAVYCI  113 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~  113 (222)
                      .     ++|++||+|+...
T Consensus        71 ~-----~~d~Vih~aa~~~   84 (338)
T d1orra_          71 Y-----MPDSCFHLAGQVA   84 (338)
T ss_dssp             H-----CCSEEEECCCCCC
T ss_pred             c-----CCceEEeeccccc
Confidence            5     6899999997543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=3.8e-10  Score=87.83  Aligned_cols=81  Identities=16%  Similarity=0.140  Sum_probs=60.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +.|++|++|||||||.||.+++++|.+.|.  +|++++|++.....-                ....+....+|+.+.++
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~----------------~~~~i~~~~~D~~~~~~   73 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE----------------AYKNVNQEVVDFEKLDD   73 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG----------------GGGGCEEEECCGGGGGG
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc----------------ccceeeeeeeccccccc
Confidence            457889999999999999999999999995  899999976432110                12355666788887665


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHH
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.       +.....|++||++|...
T Consensus        74 ~~-------~~~~~~d~vi~~~~~~~   92 (232)
T d2bkaa1          74 YA-------SAFQGHDVGFCCLGTTR   92 (232)
T ss_dssp             GG-------GGGSSCSEEEECCCCCH
T ss_pred             cc-------ccccccccccccccccc
Confidence            44       33346799999997644

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=6.2e-09  Score=84.93  Aligned_cols=84  Identities=18%  Similarity=0.173  Sum_probs=60.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh-----HHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE-----KAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      |+||||||+|.||..++++|.++|++|+.++|...     .++.+.......         ...++.++++|++|...+.
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~~~   72 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH---------IEGNMKLHYGDLTDSTCLV   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC------------------CEEEEECCTTCHHHHH
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh---------ccCCcEEEEeecCCchhhH
Confidence            45699999999999999999999999999998542     222222222111         2347899999999999999


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      +++...     .+++++|.++..
T Consensus        73 ~~~~~~-----~~~~v~~~~a~~   90 (347)
T d1t2aa_          73 KIINEV-----KPTEIYNLGAQS   90 (347)
T ss_dssp             HHHHHH-----CCSEEEECCSCC
T ss_pred             HHHhhc-----ccceeeeeeecc
Confidence            988765     567777777643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.71  E-value=1.2e-08  Score=82.28  Aligned_cols=84  Identities=17%  Similarity=0.142  Sum_probs=62.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |++|||||+|.||..+++.|+++|++|+.++|......  ...++...        ...++.++++|++|...+.++...
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~   70 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELG--------IEGDIQYEDGDMADACSVQRAVIK   70 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTT--------CGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhc--------ccCCcEEEEccccChHHhhhhhcc
Confidence            68999999999999999999999999999998653211  01111111        234789999999999999887776


Q ss_pred             HHhhccceeEEEechhhHH
Q psy7936          95 INQTEANVHILINNAVYCI  113 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~  113 (222)
                      .     ..++++++++...
T Consensus        71 ~-----~~~~~~~~a~~~~   84 (321)
T d1rpna_          71 A-----QPQEVYNLAAQSF   84 (321)
T ss_dssp             H-----CCSEEEECCSCCC
T ss_pred             c-----ccccccccccccc
Confidence            5     5577777775433

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.70  E-value=2.3e-10  Score=85.78  Aligned_cols=46  Identities=33%  Similarity=0.460  Sum_probs=41.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHh
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      ++.|+||+|+||+++|+.|++.|++|++++|++++++++.+++...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            3567788899999999999999999999999999999999988765

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.65  E-value=2.9e-08  Score=80.81  Aligned_cols=77  Identities=12%  Similarity=0.058  Sum_probs=59.4

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++|||||+|.||..++++|+++|. +|+++++.......+.               ...++.++++|+++.+++.+... 
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~---------------~~~~~~~i~~Di~~~~~~~~~~~-   65 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL---------------NHPHFHFVEGDISIHSEWIEYHV-   65 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT---------------TCTTEEEEECCTTTCSHHHHHHH-
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc---------------cCCCeEEEECccCChHHHHHHHH-
Confidence            489999999999999999999994 8999988655432221               24578999999998877655322 


Q ss_pred             HHhhccceeEEEechhhHH
Q psy7936          95 INQTEANVHILINNAVYCI  113 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~  113 (222)
                           ..+|++||+|+...
T Consensus        66 -----~~~d~Vih~a~~~~   79 (342)
T d2blla1          66 -----KKCDVVLPLVAIAT   79 (342)
T ss_dssp             -----HHCSEEEECBCCCC
T ss_pred             -----hCCCcccccccccc
Confidence                 14799999998644

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.60  E-value=1.2e-07  Score=78.41  Aligned_cols=93  Identities=12%  Similarity=0.123  Sum_probs=65.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHh-CCCEEEEEeC---------ChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYG-IGAKVIMACR---------DVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~-~g~~v~~~~r---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      -++|||||+|-||..++++|++ .|++|+++|+         ..+..++....+.....  .........+.++.+|++|
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Di~d   80 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDG--PKPPWADRYAALEVGDVRN   80 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCS--SCCTTTTCCCEEEESCTTC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhcc--ccccccccceEEEECcccC
Confidence            3699999999999999999986 6899999874         12233333333333211  0111123467889999999


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .+.++++++..    .++|++||.|+...
T Consensus        81 ~~~l~~~~~~~----~~~d~ViH~Aa~~~  105 (383)
T d1gy8a_          81 EDFLNGVFTRH----GPIDAVVHMCAFLA  105 (383)
T ss_dssp             HHHHHHHHHHS----CCCCEEEECCCCCC
T ss_pred             HHHhhhhhhcc----ceeehhhccccccc
Confidence            99988887654    57899999997543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.53  E-value=4.3e-08  Score=78.03  Aligned_cols=82  Identities=16%  Similarity=0.169  Sum_probs=57.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH-HHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE-TTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+++|||||||.||..++++|.++|++|+++.|+..... ...+.+...         ....+.++++|+.+..++.+.+
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~---------~~~~v~~v~~d~~d~~~~~~~~   73 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF---------KQLGAKLIEASLDDHQRLVDAL   73 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH---------HTTTCEEECCCSSCHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhh---------ccCCcEEEEeecccchhhhhhc
Confidence            346999999999999999999999999999999753211 111112111         1346788899999988877655


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .       ..+.++++++.
T Consensus        74 ~-------~~~~~~~~~~~   85 (312)
T d1qyda_          74 K-------QVDVVISALAG   85 (312)
T ss_dssp             T-------TCSEEEECCCC
T ss_pred             c-------Ccchhhhhhhh
Confidence            4       34566665543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.53  E-value=2.2e-08  Score=82.61  Aligned_cols=81  Identities=11%  Similarity=0.108  Sum_probs=58.8

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCE-EEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAK-VIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++|||||+|-||..++++|++.|+. |+++++......  .+.+...        ....++.++++|++|...+.++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~--------~~~~~~~~~~~Dl~d~~~l~~~~~~   71 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDI--------SESNRYNFEHADICDSAEITRIFEQ   71 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTT--------TTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhh--------hhcCCcEEEEccCCCHHHHHHHHHh
Confidence            4899999999999999999999996 455554221100  0011111        1245789999999999999988776


Q ss_pred             HHhhccceeEEEechhh
Q psy7936          95 INQTEANVHILINNAVY  111 (222)
Q Consensus        95 i~~~~~~id~li~~ag~  111 (222)
                      .     .+|++||+|+.
T Consensus        72 ~-----~~d~VihlAa~   83 (361)
T d1kewa_          72 Y-----QPDAVMHLAAE   83 (361)
T ss_dssp             H-----CCSEEEECCSC
T ss_pred             C-----CCCEEEECccc
Confidence            4     78999999964

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.53  E-value=3e-07  Score=72.47  Aligned_cols=85  Identities=15%  Similarity=0.251  Sum_probs=61.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH--HHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE--TTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +.|++|||||||.||.++++.|.+.|++|++++|+.....  +....+...         ....+.++.+|+.+.....+
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~   72 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF---------KASGANIVHGSIDDHASLVE   72 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH---------HTTTCEEECCCTTCHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh---------ccCCcEEEEeecccchhhhh
Confidence            4678999999999999999999999999999999754321  111222222         13356788899999887776


Q ss_pred             HHHHHHhhccceeEEEechhhHH
Q psy7936          91 CAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .++       ..+.+|++++...
T Consensus        73 ~~~-------~~~~vi~~~~~~~   88 (307)
T d1qyca_          73 AVK-------NVDVVISTVGSLQ   88 (307)
T ss_dssp             HHH-------TCSEEEECCCGGG
T ss_pred             hhh-------hceeeeecccccc
Confidence            654       3477788876655

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.52  E-value=2.8e-07  Score=69.88  Aligned_cols=35  Identities=23%  Similarity=0.306  Sum_probs=30.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCCh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDV   48 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~   48 (222)
                      .|++|||||||.||.+++++|.++|+  +|+...|+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~   38 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   38 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence            58999999999999999999999997  677777654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.48  E-value=2.4e-07  Score=75.23  Aligned_cols=83  Identities=18%  Similarity=0.191  Sum_probs=58.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC----hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD----VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      +.|++|||||||.||..++++|.+.|++|++++|.    ..............         ...++.++.+|+.|....
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~~d~~~~   85 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK---------QWSNFKFIQGDIRNLDDC   85 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH---------HHTTEEEEECCTTSHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhc---------ccCCeeEEeecccccccc
Confidence            56899999999999999999999999999999862    23333332221111         134688999999988766


Q ss_pred             HHHHHHHHhhccceeEEEechhh
Q psy7936          89 RDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      ....       ...+.++|.++.
T Consensus        86 ~~~~-------~~~~~v~~~~a~  101 (341)
T d1sb8a_          86 NNAC-------AGVDYVLHQAAL  101 (341)
T ss_dssp             HHHH-------TTCSEEEECCSC
T ss_pred             cccc-------cccccccccccc
Confidence            5432       244666666653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.47  E-value=1.3e-07  Score=74.80  Aligned_cols=95  Identities=13%  Similarity=0.096  Sum_probs=68.4

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      ++|||||+|-||.++++.|.+.|..| .++++..                           .+..|++|.+.+.++++..
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~---------------------------~~~~Dl~~~~~~~~~i~~~   53 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSK---------------------------EFCGDFSNPKGVAETVRKL   53 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCS---------------------------SSCCCTTCHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCc---------------------------cccCcCCCHHHHHHHHHHc
Confidence            48999999999999999999988644 4444321                           1346999999999888765


Q ss_pred             HhhccceeEEEechhhHHh-----------hhHHHHHHHHHhhcCCCCeEEEEEeCCcc
Q psy7936          96 NQTEANVHILINNAVYCIL-----------SNNILFYSILFYAIPGKNVNVYAVHPGIV  143 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l-----------~~~~~~~~~la~~~~~~gI~v~~v~PG~v  143 (222)
                           ++|++||+||....           ..+...+..+.....+.++++..++-+.+
T Consensus        54 -----~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~  107 (298)
T d1n2sa_          54 -----RPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYV  107 (298)
T ss_dssp             -----CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGG
T ss_pred             -----CCCEEEEecccccccccccCccccccccccccccchhhhhcccccccccccccc
Confidence                 68999999985431           11455556666666677777776655543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.40  E-value=2.2e-07  Score=73.01  Aligned_cols=62  Identities=23%  Similarity=0.340  Sum_probs=52.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      ++|||||||.||..++++|.++|++|+.++|+.                               +|+.|..++.++++..
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-------------------------------~D~~d~~~~~~~l~~~   51 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------------------------LDITNVLAVNKFFNEK   51 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------------------------CCTTCHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-------------------------------ccCCCHHHHHHHHHHc
Confidence            389999999999999999999999999988642                               3888888888877754


Q ss_pred             HhhccceeEEEechhhHH
Q psy7936          96 NQTEANVHILINNAVYCI  113 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~  113 (222)
                           ++|++||+|+...
T Consensus        52 -----~~d~vih~a~~~~   64 (281)
T d1vl0a_          52 -----KPNVVINCAAHTA   64 (281)
T ss_dssp             -----CCSEEEECCCCCC
T ss_pred             -----CCCEEEeeccccc
Confidence                 6799999987554

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.39  E-value=4.1e-07  Score=72.83  Aligned_cols=95  Identities=15%  Similarity=0.171  Sum_probs=65.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      .|++|||||+|.||.+++++|++.|+.++++++..                              ++|+.+.+.+.++++
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~------------------------------~~~~~~~~~~~~~~~   51 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------------------ELNLLDSRAVHDFFA   51 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------------------TCCTTCHHHHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch------------------------------hccccCHHHHHHHHh
Confidence            57899999999999999999999999887765321                              158888888888766


Q ss_pred             HHHhhccceeEEEechhhHH------------hhhHHHHHHHHHhhcCCCCe-EEEEEeCCcc
Q psy7936          94 DINQTEANVHILINNAVYCI------------LSNNILFYSILFYAIPGKNV-NVYAVHPGIV  143 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~------------l~~~~~~~~~la~~~~~~gI-~v~~v~PG~v  143 (222)
                      ..     .+|.++|+|+...            +.++...+..+.....+.++ ++..++-..+
T Consensus        52 ~~-----~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~v  109 (315)
T d1e6ua_          52 SE-----RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI  109 (315)
T ss_dssp             HH-----CCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGG
T ss_pred             hc-----CCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceE
Confidence            43     6899999885543            11234444444444444455 4655544433

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.31  E-value=7.7e-07  Score=72.43  Aligned_cols=63  Identities=14%  Similarity=0.161  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      +.|+++||||||.||.+++++|.++|++|+++.|+..+...  ..+..           ...+..+++|+.|..++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~-----------~~~v~~~~gD~~d~~~~   64 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-----------IPNVTLFQGPLLNNVPL   64 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-----------STTEEEEESCCTTCHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc-----------cCCCEEEEeeCCCcHHH
Confidence            46899999999999999999999999999999998765432  22221           33677888999886654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.31  E-value=7.8e-08  Score=78.46  Aligned_cols=82  Identities=17%  Similarity=0.146  Sum_probs=55.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC--hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD--VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+|||||||-||..++++|.+.|++|.+++++  .....  ...+...         .+.++.++.+|+.|.+.+..+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~--~~~~~~~---------~~~~i~~~~~Di~d~~~~~~~   70 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAI---------LGDRVELVVGDIADAELVDKL   70 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGGG---------CSSSEEEEECCTTCHHHHHHH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc--HHHHHHh---------hcCCeEEEEccCCCHHHHHHH
Confidence            3689999999999999999999999854444332  11000  0000111         245889999999999888876


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.       ..+.++|.|+...
T Consensus        71 ~~-------~~~~v~~~a~~~~   85 (346)
T d1oc2a_          71 AA-------KADAIVHYAAESH   85 (346)
T ss_dssp             HT-------TCSEEEECCSCCC
T ss_pred             Hh-------hhhhhhhhhhccc
Confidence            53       3466778876543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=2.6e-07  Score=74.32  Aligned_cols=34  Identities=24%  Similarity=0.209  Sum_probs=31.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      .|++|||||+|-||..++++|.+.|++|+++++.
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~   34 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF   34 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence            4789999999999999999999999999999863

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.22  E-value=4.3e-07  Score=74.27  Aligned_cols=77  Identities=18%  Similarity=0.056  Sum_probs=56.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +.++|||||+|-||..++++|.++|++|+++++......      ..          ......+..+|+.+.+.+.++++
T Consensus        15 nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~----------~~~~~~~~~~D~~~~~~~~~~~~   78 (363)
T d2c5aa1          15 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TE----------DMFCDEFHLVDLRVMENCLKVTE   78 (363)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CG----------GGTCSEEEECCTTSHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hh----------hcccCcEEEeechhHHHHHHHhh
Confidence            456999999999999999999999999999987543210      00          01234577789988877665443


Q ss_pred             HHHhhccceeEEEechhhHH
Q psy7936          94 DINQTEANVHILINNAVYCI  113 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~  113 (222)
                             .+|.+||.|+...
T Consensus        79 -------~~d~Vih~a~~~~   91 (363)
T d2c5aa1          79 -------GVDHVFNLAADMG   91 (363)
T ss_dssp             -------TCSEEEECCCCCC
T ss_pred             -------cCCeEeecccccc
Confidence                   5699999985554

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.21  E-value=3.3e-06  Score=62.61  Aligned_cols=86  Identities=17%  Similarity=0.201  Sum_probs=62.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++++|+++|.|+ ||.|++++..|.+.|. ++++..|+.++.+++....++..+        ........+|+.+.+++
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~   84 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE--------NTDCVVTVTDLADQQAF   84 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH--------HSSCEEEEEETTCHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh--------hcCcceEeeecccccch
Confidence            5688999999999 6899999999999998 899999998766655544333210        22344556788877666


Q ss_pred             HHHHHHHHhhccceeEEEechhh
Q psy7936          89 RDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~  111 (222)
                      .....       ..|++||+...
T Consensus        85 ~~~~~-------~~diiIN~Tp~  100 (182)
T d1vi2a1          85 AEALA-------SADILTNGTKV  100 (182)
T ss_dssp             HHHHH-------TCSEEEECSST
T ss_pred             hhhhc-------ccceeccccCC
Confidence            54432       56999999753

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.05  E-value=1.8e-05  Score=57.32  Aligned_cols=111  Identities=22%  Similarity=0.281  Sum_probs=76.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++++++++|.|+ |++|..+++.|...|+ +++++.|+.++.+++.+.+.             .++       .+.+++
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~-------------~~~-------~~~~~~   78 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-------------GEA-------VRFDEL   78 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-------------CEE-------CCGGGH
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh-------------ccc-------ccchhH
Confidence            3678999999998 9999999999999998 79999999999888876652             121       122333


Q ss_pred             HHHHHHHHhhccceeEEEechhhHH-hhhHHHHHHHHHhhcCCCCeEEEEE-eCCcccCCcC
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCI-LSNNILFYSILFYAIPGKNVNVYAV-HPGIVKTELG  148 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~-l~~~~~~~~~la~~~~~~gI~v~~v-~PG~v~T~~~  148 (222)
                      .+.+       ...|++|++.+... +..-..+-..+..+-..+.+-+..+ .|.-++....
T Consensus        79 ~~~l-------~~~Divi~atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr~vd~~v~  133 (159)
T d1gpja2          79 VDHL-------ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDVEEGVE  133 (159)
T ss_dssp             HHHH-------HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCSBCTTGG
T ss_pred             HHHh-------ccCCEEEEecCCCCccccHhhhHHHHHhcccCCCeEEEeecCCCCcChhhh
Confidence            3332       35699999988654 3334444455555444455667766 6777765543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.94  E-value=2.2e-05  Score=57.04  Aligned_cols=44  Identities=30%  Similarity=0.440  Sum_probs=39.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE   57 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   57 (222)
                      +.|+++|.|| |.+|..+|+.|+++|++|++++|+.++++++.+.
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~   44 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG   44 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc
Confidence            3688999987 8999999999999999999999999998877643

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.86  E-value=5.5e-05  Score=55.64  Aligned_cols=80  Identities=18%  Similarity=0.205  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|+||++|+|...++-....|++|+.+++++++.+.+.+    .          +....+   |-.+....+.+.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~----------Ga~~vi---~~~~~~~~~~~~   91 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----I----------GFDAAF---NYKTVNSLEEAL   91 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T----------TCSEEE---ETTSCSCHHHHH
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----h----------hhhhhc---ccccccHHHHHH
Confidence            57899999999999999888888889999999999887544332    1          223223   333333333332


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      +.  .....+|+++++.|.
T Consensus        92 ~~--~~~~Gvd~v~D~vG~  108 (182)
T d1v3va2          92 KK--ASPDGYDCYFDNVGG  108 (182)
T ss_dssp             HH--HCTTCEEEEEESSCH
T ss_pred             HH--hhcCCCceeEEecCc
Confidence            22  222479999999983

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=7.5e-05  Score=54.42  Aligned_cols=80  Identities=16%  Similarity=0.270  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|+||++++|...++-.-..|++|+++++++++.+.+. ++             +..-.   .|.++.+-.+++ 
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~-------------Ga~~v---i~~~~~~~~~~i-   89 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QN-------------GAHEV---FNHREVNYIDKI-   89 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-------------TCSEE---EETTSTTHHHHH-
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc-cc-------------Ccccc---cccccccHHHHh-
Confidence            5789999999999999988888888999999999887654432 22             22222   254544333332 


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .+... ...+|+++.+.|.
T Consensus        90 ~~~t~-~~g~d~v~d~~g~  107 (174)
T d1yb5a2          90 KKYVG-EKGIDIIIEMLAN  107 (174)
T ss_dssp             HHHHC-TTCEEEEEESCHH
T ss_pred             hhhhc-cCCceEEeecccH
Confidence            22211 2369999999984

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=5e-05  Score=55.35  Aligned_cols=50  Identities=20%  Similarity=0.275  Sum_probs=44.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      .+++||.++|.|+ ||.+++++..|.+.|.+|+++.|+.++.+++.+.+..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~   63 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH   63 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh
Confidence            4578999999997 7899999999999999999999999999888876654

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.77  E-value=0.00016  Score=53.33  Aligned_cols=103  Identities=13%  Similarity=0.141  Sum_probs=63.9

Q ss_pred             CCCEEEE-ecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVII-TGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lV-tGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++| +||++|+|.+.++-.-..|++|+.+.|+.+..++..+.+++.         +...++.  .|-.+..++...
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l---------Gad~vi~--~~~~~~~~~~~~   96 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL---------GATQVIT--EDQNNSREFGPT   96 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH---------TCSEEEE--HHHHHCGGGHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc---------cccEEEe--ccccchhHHHHH
Confidence            3555555 799999998887766667999999999888777777777664         2223322  221222333334


Q ss_pred             HHHHHh-hccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCe
Q psy7936          92 AQDINQ-TEANVHILINNAVYCILSNNILFYSILFYAIPGKNV  133 (222)
Q Consensus        92 ~~~i~~-~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI  133 (222)
                      +.++.. ..+.+|+++.+.|....       ..+...+++.|.
T Consensus        97 v~~~~~~~g~~vdvv~D~vg~~~~-------~~~~~~l~~~G~  132 (189)
T d1gu7a2          97 IKEWIKQSGGEAKLALNCVGGKSS-------TGIARKLNNNGL  132 (189)
T ss_dssp             HHHHHHHHTCCEEEEEESSCHHHH-------HHHHHTSCTTCE
T ss_pred             HHHHHhhccCCceEEEECCCcchh-------hhhhhhhcCCcE
Confidence            444433 34579999999884432       333344566553

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.61  E-value=0.00014  Score=53.02  Aligned_cols=77  Identities=18%  Similarity=0.211  Sum_probs=57.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .++++|.++|.|+ ||.+++++..|.+.+.+|+++.|+.++.+.+.+.+...           ..+.....|-.      
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~-----------~~~~~~~~~~~------   75 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY-----------GNIQAVSMDSI------   75 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG-----------SCEEEEEGGGC------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc-----------cccchhhhccc------
Confidence            4578999999887 77899999999998789999999999999998887643           23333333311      


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                              .....|++||+....
T Consensus        76 --------~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 --------PLQTYDLVINATSAG   90 (171)
T ss_dssp             --------CCSCCSEEEECCCC-
T ss_pred             --------cccccceeeeccccc
Confidence                    124679999997644

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.60  E-value=6e-05  Score=47.53  Aligned_cols=42  Identities=19%  Similarity=0.368  Sum_probs=36.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      ++.+++|+||++|+|...++-+...|++|+.+.+++++.+-+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            577899999999999988887778899999999999876544

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=97.57  E-value=1.2e-05  Score=64.46  Aligned_cols=80  Identities=11%  Similarity=0.026  Sum_probs=52.6

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEE------EEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKV------IMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v------~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++|||||+|-||..+++.|.++|++|      +..+.-......  ..+...        ....++.++.+|.++.....
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~--------~~~~~~~~~~~d~~~~~~~~   71 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPV--------DADPRLRFVHGDIRDAGLLA   71 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGG--------TTCTTEEEEECCTTCHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhh--------hcCCCeEEEEeccccchhhh
Confidence            48999999999999999999998744      444321110000  000000        02457889999999987666


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      ..       ....|.++|.|+..
T Consensus        72 ~~-------~~~~d~vi~~a~~~   87 (322)
T d1r6da_          72 RE-------LRGVDAIVHFAAES   87 (322)
T ss_dssp             HH-------TTTCCEEEECCSCC
T ss_pred             cc-------ccccceEEeecccc
Confidence            43       23679999998654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.54  E-value=0.00014  Score=50.50  Aligned_cols=91  Identities=21%  Similarity=0.261  Sum_probs=63.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      .++|.|+ |.+|+.+++.|.+.|+.|++++++++..+++.+.+               ...++..|.++.+.++++  .+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~---------------~~~vi~Gd~~~~~~l~~~--~i   63 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---------------DALVINGDCTKIKTLEDA--GI   63 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---------------SSEEEESCTTSHHHHHHT--TT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh---------------hhhhccCcccchhhhhhc--Ch
Confidence            5789998 88999999999999999999999999887765432               345788999999877764  11


Q ss_pred             HhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCC
Q psy7936          96 NQTEANVHILINNAVYCILSNNILFYSILFYAIPGK  131 (222)
Q Consensus        96 ~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~  131 (222)
                          ...|.++.....- -.  +.++-.+++++...
T Consensus        64 ----~~a~~vv~~t~~d-~~--N~~~~~~~k~~~~~   92 (132)
T d1lssa_          64 ----EDADMYIAVTGKE-EV--NLMSSLLAKSYGIN   92 (132)
T ss_dssp             ----TTCSEEEECCSCH-HH--HHHHHHHHHHTTCC
T ss_pred             ----hhhhhhcccCCcH-HH--HHHHHHHHHHcCCc
Confidence                2456666653322 11  22344456666654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.54  E-value=0.00037  Score=50.25  Aligned_cols=84  Identities=20%  Similarity=0.202  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|+| +|++|...++.+...|++|+++++++++++.+.+ +             +....+ ..|-. .++.....
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~-------------ga~~~~-~~~~~-~~~~~~~~   88 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C-------------GADVTL-VVDPA-KEEESSII   88 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-------------TCSEEE-ECCTT-TSCHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c-------------CCcEEE-ecccc-ccccchhh
Confidence            467899997 6899999998888889999999999998755433 2             222222 12222 22334444


Q ss_pred             HHHHhhc-cceeEEEechhhHH
Q psy7936          93 QDINQTE-ANVHILINNAVYCI  113 (222)
Q Consensus        93 ~~i~~~~-~~id~li~~ag~~~  113 (222)
                      +.+.+.. ..+|++|.++|...
T Consensus        89 ~~~~~~~g~g~D~vid~~g~~~  110 (170)
T d1e3ja2          89 ERIRSAIGDLPNVTIDCSGNEK  110 (170)
T ss_dssp             HHHHHHSSSCCSEEEECSCCHH
T ss_pred             hhhhcccccCCceeeecCCChH
Confidence            5555544 36899999998643

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.54  E-value=9.1e-05  Score=54.23  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +|.+++|+||++++|...++-....|++++++.+++++.+.+    ++.          +....+   |-.+. ++.+.+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~~----------Ga~~vi---~~~~~-~~~~~v   86 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRL----------GVEYVG---DSRSV-DFADEI   86 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTT----------CCSEEE---ETTCS-THHHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc----ccc----------cccccc---cCCcc-CHHHHH
Confidence            478999999999999998887777899999999988765432    222          222222   33333 333333


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      .+... ...+|+++.+.|.
T Consensus        87 ~~~t~-~~g~d~v~d~~g~  104 (183)
T d1pqwa_          87 LELTD-GYGVDVVLNSLAG  104 (183)
T ss_dssp             HHHTT-TCCEEEEEECCCT
T ss_pred             HHHhC-CCCEEEEEecccc
Confidence            22211 2369999999984

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.52  E-value=0.00015  Score=52.83  Aligned_cols=81  Identities=14%  Similarity=0.212  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|+||++++|...++-....|++|+.+++++++.+.+.+ +             +.+..   .|-++.+-.++ +
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-l-------------Ga~~v---i~~~~~d~~~~-v   89 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-------------GAWQV---INYREEDLVER-L   89 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-------------TCSEE---EETTTSCHHHH-H
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-c-------------CCeEE---EECCCCCHHHH-H
Confidence            47899999999999998888777789999999999998755442 2             22211   25455332333 3


Q ss_pred             HHHHhhccceeEEEechhhH
Q psy7936          93 QDINQTEANVHILINNAVYC  112 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~  112 (222)
                      .++. ....+|+++.+.|..
T Consensus        90 ~~~t-~g~g~d~v~d~~g~~  108 (179)
T d1qora2          90 KEIT-GGKKVRVVYDSVGRD  108 (179)
T ss_dssp             HHHT-TTCCEEEEEECSCGG
T ss_pred             HHHh-CCCCeEEEEeCccHH
Confidence            3322 234789999999854

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.43  E-value=0.00045  Score=50.44  Aligned_cols=82  Identities=18%  Similarity=0.291  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|+|+ |++|...++.+-..|+ +|+++++++++++-+. ++             +....+   |.++ .+..+.
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~l-------------Ga~~vi---~~~~-~~~~~~   88 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-------------GADLTL---NRRE-TSVEER   88 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-------------TCSEEE---ETTT-SCHHHH
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cc-------------cceEEE---eccc-cchHHH
Confidence            5789999997 8999998888888898 8999999999875432 22             222222   3322 223333


Q ss_pred             HHHHHhhc--cceeEEEechhhHH
Q psy7936          92 AQDINQTE--ANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~--~~id~li~~ag~~~  113 (222)
                      .+++.+..  ..+|++|.++|...
T Consensus        89 ~~~i~~~~~~~g~Dvvid~vG~~~  112 (182)
T d1vj0a2          89 RKAIMDITHGRGADFILEATGDSR  112 (182)
T ss_dssp             HHHHHHHTTTSCEEEEEECSSCTT
T ss_pred             HHHHHHhhCCCCceEEeecCCchh
Confidence            33333332  25999999998643

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.38  E-value=0.00045  Score=50.08  Aligned_cols=42  Identities=21%  Similarity=0.384  Sum_probs=36.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .|.+++|+||+|++|...++-.-..|++|+.+++++++.+.+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~   68 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP   68 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccc
Confidence            678999999999999998887778899999999998776544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.22  E-value=0.00053  Score=52.04  Aligned_cols=80  Identities=19%  Similarity=0.169  Sum_probs=52.8

Q ss_pred             CCCCCCEEEEecC----------------CCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCC
Q psy7936          10 SRLDGKTVIITGC----------------NTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPG   73 (222)
Q Consensus        10 ~~~~~k~~lVtGa----------------s~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~   73 (222)
                      .+|.|+.+|||+|                ||-+|.++|+.++.+|++|+++.-....                   .++.
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-------------------~~p~   62 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-------------------PTPP   62 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-------------------CCCT
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc-------------------Cccc
Confidence            5789999999987                4578999999999999999887643320                   0122


Q ss_pred             eEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          74 EVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        74 ~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .+..+  .+.+..++...+.   +.....|++|++|++..
T Consensus        63 ~~~~~--~~~t~~~m~~~~~---~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          63 FVKRV--DVMTALEMEAAVN---ASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             TEEEE--ECCSHHHHHHHHH---HHGGGCSEEEECCBCCS
T ss_pred             ccccc--eehhhHHHHHHHH---hhhccceeEeeeechhh
Confidence            22222  3334444444433   33346689999988766

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.22  E-value=0.0012  Score=47.40  Aligned_cols=82  Identities=15%  Similarity=0.193  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+.+++|.|+++++|..+++.+...|+ +|+++++++++.+.+.+ +             +.+..+   |-++.+..++.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~-------------Ga~~~i---~~~~~~~~~~~   89 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A-------------GADYVI---NASMQDPLAEI   89 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H-------------TCSEEE---ETTTSCHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c-------------CCceee---ccCCcCHHHHH
Confidence            567999999999999999998888885 99999999887655442 2             222221   33333333333


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .+..  ..+.+|++|.++|...
T Consensus        90 ~~~~--~~~~~d~vid~~g~~~  109 (170)
T d1jvba2          90 RRIT--ESKGVDAVIDLNNSEK  109 (170)
T ss_dssp             HHHT--TTSCEEEEEESCCCHH
T ss_pred             HHHh--hcccchhhhcccccch
Confidence            2221  1246999999998554

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.17  E-value=0.0004  Score=48.03  Aligned_cols=90  Identities=17%  Similarity=0.136  Sum_probs=60.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |.++|.|. |.+|+.+++.|.+.|+.|++++.+++..+++.+.              +  ...+.+|.++++.+.++  .
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~--------------~--~~~~~gd~~~~~~l~~a--~   61 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY--------------A--THAVIANATEENELLSL--G   61 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT--------------C--SEEEECCTTCTTHHHHH--T
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh--------------C--Ccceeeecccchhhhcc--C
Confidence            56788877 6799999999999999999999999987765321              2  23556899998877664  1


Q ss_pred             HHhhccceeEEEechhhHHhhhHHHHHHHHHhhcC
Q psy7936          95 INQTEANVHILINNAVYCILSNNILFYSILFYAIP  129 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~  129 (222)
                      +    ...|.+|...+-...  ...++...++.+.
T Consensus        62 i----~~a~~vi~~~~~~~~--~~~~~~~~~~~~~   90 (134)
T d2hmva1          62 I----RNFEYVIVAIGANIQ--ASTLTTLLLKELD   90 (134)
T ss_dssp             G----GGCSEEEECCCSCHH--HHHHHHHHHHHTT
T ss_pred             C----ccccEEEEEcCchHH--hHHHHHHHHHHcC
Confidence            2    245777666443222  2334444445554

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.16  E-value=0.00014  Score=56.77  Aligned_cols=30  Identities=23%  Similarity=0.361  Sum_probs=27.1

Q ss_pred             EEEecCCCchHHHHHHHHHhCCC-EEEEEeC
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGA-KVIMACR   46 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~-~v~~~~r   46 (222)
                      +|||||+|-||..++++|+++|+ .|+++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~   32 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC
Confidence            79999999999999999999997 6887763

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.14  E-value=0.0028  Score=46.40  Aligned_cols=45  Identities=20%  Similarity=0.165  Sum_probs=38.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      |++.|.|+ |-||..+|..++..|++|++.+++++.+++..+.+..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~   49 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAK   49 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhh
Confidence            35778888 7799999999999999999999999887776666544

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.00063  Score=49.98  Aligned_cols=79  Identities=16%  Similarity=0.259  Sum_probs=52.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +.++||+||+||+|...++-.-..|+ .|+.+++++++..++...+             +.+..+   |..+. +..+.+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-------------gad~vi---~~~~~-~~~~~~   93 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-------------GFDAAV---NYKTG-NVAEQL   93 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-------------CCSEEE---ETTSS-CHHHHH
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-------------cceEEe---eccch-hHHHHH
Confidence            47899999999999887776666898 5666677877766665544             222222   33332 344444


Q ss_pred             HHHHhhccceeEEEechhh
Q psy7936          93 QDINQTEANVHILINNAVY  111 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~  111 (222)
                      +++..  ..+|+++.+.|.
T Consensus        94 ~~~~~--~GvDvv~D~vGg  110 (187)
T d1vj1a2          94 REACP--GGVDVYFDNVGG  110 (187)
T ss_dssp             HHHCT--TCEEEEEESSCH
T ss_pred             HHHhc--cCceEEEecCCc
Confidence            44432  369999999984

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.11  E-value=0.0036  Score=43.99  Aligned_cols=106  Identities=11%  Similarity=0.084  Sum_probs=64.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+++.|.|+ |.+|..+|..|+..|.  .|++++++++..+....++.....       ..........|.   ++    
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~-------~~~~~~~~~~d~---~~----   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA-------FTAPKKIYSGEY---SD----   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG-------GSCCCEEEECCG---GG----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhcccc-------ccCCceEeeccH---HH----
Confidence            457888896 8899999999999884  899999999887766666654310       111223333342   11    


Q ss_pred             HHHHHhhccceeEEEechhhHHhhh---------HHHHHHHHHhh---cCCCCeEEEEEeCC
Q psy7936          92 AQDINQTEANVHILINNAVYCILSN---------NILFYSILFYA---IPGKNVNVYAVHPG  141 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~---------~~~~~~~la~~---~~~~gI~v~~v~PG  141 (222)
                             ...-|++|..+|.....+         +...++.++.+   +.+++|-++.-.|-
T Consensus        70 -------~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvtNPv  124 (146)
T d1ez4a1          70 -------CKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV  124 (146)
T ss_dssp             -------GTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred             -------hccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCcc
Confidence                   124599999998776222         34444444433   45566665554543

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.0016  Score=46.81  Aligned_cols=82  Identities=20%  Similarity=0.263  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++-.. ++             +.+. ++..+-.+....   
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~-------------Ga~~-~~~~~~~~~~~~---   86 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-------------GADL-VLQISKESPQEI---   86 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-------------TCSE-EEECSSCCHHHH---
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh-------------CCcc-cccccccccccc---
Confidence            4678999987 9999999998888999 8999999999876443 22             2222 222222333333   


Q ss_pred             HHHHHhhc-cceeEEEechhhHH
Q psy7936          92 AQDINQTE-ANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~-~~id~li~~ag~~~  113 (222)
                      .+.+.... ..+|++|.++|...
T Consensus        87 ~~~~~~~~g~g~Dvvid~~G~~~  109 (171)
T d1pl8a2          87 ARKVEGQLGCKPEVTIECTGAEA  109 (171)
T ss_dssp             HHHHHHHHTSCCSEEEECSCCHH
T ss_pred             cccccccCCCCceEEEeccCCch
Confidence            33333333 47899999999543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.99  E-value=0.0033  Score=45.42  Aligned_cols=115  Identities=11%  Similarity=-0.002  Sum_probs=71.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhh-------hhcccCCCCCeEEEEecCCCChhh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFE-------VATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      +.+-|.|- |-+|..+|+.|++.|++|++++|+.++.+++.+.-.....       .........  ...+...+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~--~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKK--PRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCS--SCEEEECSCTTHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcc--cceEEEecCchHH
Confidence            45667776 7799999999999999999999999998887653110000       000000011  1223334555677


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEE
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~  137 (222)
                      +..+.+.+.....+=+++|...-..+     .-++.++..+.++|+++..
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT~~~-----~~~~~~~~~~~~~g~~~ld  124 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGNSEY-----RDTMRRCRDLKDKGILFVG  124 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSCCCH-----HHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHhccccCcEEEecCcchh-----HHHHHHHHHHHhcCCceec
Confidence            77777777666555566776644332     3345566666667887665

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00099  Score=49.23  Aligned_cols=46  Identities=20%  Similarity=0.224  Sum_probs=39.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      |++.|.|| |-||..+|..++..|+.|++++++++.+++..+.+++.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~   50 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEES   50 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHH
Confidence            57889998 67999999999999999999999998877776666543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.94  E-value=0.0017  Score=46.34  Aligned_cols=91  Identities=13%  Similarity=0.045  Sum_probs=56.2

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDIN   96 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~   96 (222)
                      +.|.|+ |-+|..+|+.|.+.|++|++++|+++..++..+.-....-....+.....+++++...   ...+.++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp---~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTP---IQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSC---HHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCc---Hhhhhhhhhhhh
Confidence            455655 8899999999999999999999998877665432100000000001123455555443   457778888886


Q ss_pred             hhccceeEEEechhh
Q psy7936          97 QTEANVHILINNAVY  111 (222)
Q Consensus        97 ~~~~~id~li~~ag~  111 (222)
                      ....+=.++++.++.
T Consensus        79 ~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          79 PHLSPTAIVTDVASV   93 (165)
T ss_dssp             GGSCTTCEEEECCSC
T ss_pred             hhcccccceeecccc
Confidence            655444556655543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.89  E-value=0.0027  Score=45.96  Aligned_cols=81  Identities=14%  Similarity=0.046  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|.|+ |++|...++.+-..|+ +|+++++++++.+... ++             +...   .+|..+....++ 
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l-------------Ga~~---~i~~~~~~~~~~-   87 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY-------------GATD---ILNYKNGHIEDQ-   87 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH-------------TCSE---EECGGGSCHHHH-
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh-------------Cccc---cccccchhHHHH-
Confidence            4678999986 8999998888888897 7999999998765543 23             2111   124444333332 


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.++.. ...+|++|.++|...
T Consensus        88 v~~~t~-g~G~D~vid~~g~~~  108 (174)
T d1jqba2          88 VMKLTN-GKGVDRVIMAGGGSE  108 (174)
T ss_dssp             HHHHTT-TSCEEEEEECSSCTT
T ss_pred             HHHHhh-ccCcceEEEccCCHH
Confidence            222221 235999999998654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.83  E-value=0.002  Score=46.49  Aligned_cols=83  Identities=16%  Similarity=0.155  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+...+.              +....+...+  ..+.+.+.
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~--------------Ga~~~i~~~~--~~~~~~~~   90 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV--------------GATECVNPQD--YKKPIQEV   90 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT--------------TCSEEECGGG--CSSCHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh--------------CCeeEEecCC--chhHHHHH
Confidence            5789999999 7899999999999986 999999999986544321              2222221112  12334444


Q ss_pred             HHHHHhhccceeEEEechhhHHh
Q psy7936          92 AQDINQTEANVHILINNAVYCIL  114 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l  114 (222)
                      .+...  .+.+|++|.+.|....
T Consensus        91 ~~~~~--~~G~D~vid~~G~~~~  111 (176)
T d2jhfa2          91 LTEMS--NGGVDFSFEVIGRLDT  111 (176)
T ss_dssp             HHHHT--TSCBSEEEECSCCHHH
T ss_pred             HHHHh--cCCCCEEEecCCchhH
Confidence            44332  2478999999986643

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.83  E-value=0.00084  Score=48.99  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=34.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      +.++||+||+||+|...++-.-..|++|+.+.+++++.+.+
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            45899999999999887777777899999999999886544

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.83  E-value=0.0011  Score=47.70  Aligned_cols=45  Identities=22%  Similarity=0.349  Sum_probs=39.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEI   58 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i   58 (222)
                      ++|.++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5678999988 8899999999999997 8999999999888776554

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.81  E-value=0.0056  Score=44.04  Aligned_cols=80  Identities=11%  Similarity=0.118  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|.|+ +++|...++.+...|+ .|+++++++++++.+. ++.            ...+    .|..+ +++.+.
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~G------------a~~~----i~~~~-~~~~~~   88 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLG------------ATHV----INSKT-QDPVAA   88 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHT------------CSEE----EETTT-SCHHHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcC------------CeEE----EeCCC-cCHHHH
Confidence            5778999997 8999999988877888 6677788887765543 221            1122    23343 334444


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.++..  +.+|++|.+.|...
T Consensus        89 i~~~t~--gg~D~vid~~G~~~  108 (174)
T d1f8fa2          89 IKEITD--GGVNFALESTGSPE  108 (174)
T ss_dssp             HHHHTT--SCEEEEEECSCCHH
T ss_pred             HHHHcC--CCCcEEEEcCCcHH
Confidence            444322  47999999998654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.79  E-value=0.00052  Score=49.67  Aligned_cols=43  Identities=23%  Similarity=0.414  Sum_probs=35.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      .+.++||+||+||+|...++-.-..|++|+.+.+++++.+.+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~   65 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK   65 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH
Confidence            3568999999999998877665567999999999988765553

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.78  E-value=0.0059  Score=44.13  Aligned_cols=81  Identities=19%  Similarity=0.142  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh-HHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS-IRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~   90 (222)
                      .|.+++|.|+ +|+|...++.+...|+ +|+++++++++++-..+ +             +....+   |-.+.+. ...
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~-------------GA~~~i---n~~~~~~~~~~   90 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V-------------GATECI---SPKDSTKPISE   90 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H-------------TCSEEE---CGGGCSSCHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c-------------CCcEEE---CccccchHHHH
Confidence            5789999986 8999999999999996 89999999998864433 2             223223   2222222 222


Q ss_pred             HHHHHHhhccceeEEEechhhHH
Q psy7936          91 CAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.+ .. ....+|++|.+.|...
T Consensus        91 ~~~-~~-~g~G~d~vi~~~g~~~  111 (176)
T d1d1ta2          91 VLS-EM-TGNNVGYTFEVIGHLE  111 (176)
T ss_dssp             HHH-HH-HTSCCCEEEECSCCHH
T ss_pred             HHH-Hh-ccccceEEEEeCCchH
Confidence            222 21 2246999999988543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.75  E-value=0.0007  Score=49.41  Aligned_cols=43  Identities=19%  Similarity=0.310  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      .|.++||+||+||+|...++-.-..|++|+.+.+++++.+.+.
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~   73 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR   73 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH
Confidence            4778999999999998877776678999999999988765443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.75  E-value=0.0039  Score=44.62  Aligned_cols=41  Identities=32%  Similarity=0.431  Sum_probs=34.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .|.+++|.|+ |++|...++.+-..|++|+++++++++++..
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a   67 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA   67 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh
Confidence            5789999987 8999998876667799999999999877654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.72  E-value=0.012  Score=42.05  Aligned_cols=99  Identities=17%  Similarity=0.123  Sum_probs=60.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCC-ChhhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLA-SFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~   90 (222)
                      .|.+++|.|+ +|+|...++.+...|+ +|+.+++++++.+. .+++.             ....+   |.. ..+.+.+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~lG-------------a~~~i---~~~~~~~~~~~   89 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEFG-------------ATECI---NPQDFSKPIQE   89 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHHT-------------CSEEE---CGGGCSSCHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHhC-------------CcEEE---eCCchhhHHHH
Confidence            5789999998 5899998888888897 78888888877543 33332             12111   222 2234444


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEE
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v  138 (222)
                      .+....  .+.+|++|.+.|....       ...+.++.++|-.+..+
T Consensus        90 ~~~~~~--~~g~D~vid~~G~~~~-------~~~~~~~~~~g~~~~~v  128 (176)
T d2fzwa2          90 VLIEMT--DGGVDYSFECIGNVKV-------MRAALEACHKGWGVSVV  128 (176)
T ss_dssp             HHHHHT--TSCBSEEEECSCCHHH-------HHHHHHTBCTTTCEEEE
T ss_pred             HHHHHc--CCCCcEeeecCCCHHH-------HHHHHHhhcCCceeEEE
Confidence            444432  2479999999985432       23344455555444444

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.72  E-value=0.0018  Score=46.94  Aligned_cols=50  Identities=36%  Similarity=0.495  Sum_probs=43.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      .++++|.++|.|+ ||.+++++..|.+.| +|++..|+.++.+++.+.+...
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            3578999999987 579999999998776 9999999999999998887654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.72  E-value=0.00076  Score=43.69  Aligned_cols=38  Identities=18%  Similarity=0.204  Sum_probs=33.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      +++||+++|.|. +..|+++|+.|.++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999998 55799999999999999999997653

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.67  E-value=0.0084  Score=42.52  Aligned_cols=41  Identities=32%  Similarity=0.376  Sum_probs=35.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .|.+++|.|+ +++|...++-+-..|++|+++++++++++..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            5778999886 9999998888878899999999999887544

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.63  E-value=0.005  Score=43.15  Aligned_cols=103  Identities=15%  Similarity=0.179  Sum_probs=63.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .-|++.|.|+.|-||..+|+.|.+.|++|.+++|+.....+..  +            ..........++   ..+...+
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~--~------------~~~~~v~~~~~~---~~~~~v~   70 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI--L------------ANADVVIVSVPI---NLTLETI   70 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH--H------------TTCSEEEECSCG---GGHHHHH
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh--h------------hhccccccccch---hhheeee
Confidence            4468999999999999999999999999999999876543321  1            133555555444   3555566


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeC
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHP  140 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~P  140 (222)
                      .++.....+=.+++..+.+..     ...+.+...+..   ++...||
T Consensus        71 ~~~~~~~~~~~iiiD~~Svk~-----~~~~~~~~~~~~---~~v~~hP  110 (152)
T d2pv7a2          71 ERLKPYLTENMLLADLTSVKR-----EPLAKMLEVHTG---AVLGLHP  110 (152)
T ss_dssp             HHHGGGCCTTSEEEECCSCCH-----HHHHHHHHHCSS---EEEEEEE
T ss_pred             ecccccccCCceEEEecccCH-----HHHHHHHHHccC---CEEEecc
Confidence            666554333235555554432     223444444432   4445555

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.61  E-value=0.0024  Score=46.01  Aligned_cols=41  Identities=22%  Similarity=0.150  Sum_probs=36.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      |++-|.|+ |.+|.++|..|+++|++|++++|+++..+.+.+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            67889998 779999999999999999999999988776654

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.50  E-value=0.027  Score=39.26  Aligned_cols=46  Identities=15%  Similarity=0.273  Sum_probs=37.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      |++.|+|+ |.+|..+|..|+.+|.  ++++++++++.++....++...
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a   49 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDA   49 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhcc
Confidence            56778895 8999999999999884  8999999998877766666643

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.0055  Score=43.01  Aligned_cols=76  Identities=12%  Similarity=0.054  Sum_probs=57.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      .++|.|. +.+|..+++.|.+.|..+++++.+++...+..+....            ..+.++..|.++++.++++  .+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~------------~~~~vi~Gd~~d~~~L~~a--~i   69 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG------------DNADVIPGDSNDSSVLKKA--GI   69 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC------------TTCEEEESCTTSHHHHHHH--TT
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc------------CCcEEEEccCcchHHHHHh--cc
Confidence            4788888 5799999999999999999999998876665555432            3567889999998877764  11


Q ss_pred             HhhccceeEEEechh
Q psy7936          96 NQTEANVHILINNAV  110 (222)
Q Consensus        96 ~~~~~~id~li~~ag  110 (222)
                          .+.+.+|...+
T Consensus        70 ----~~a~~vi~~~~   80 (153)
T d1id1a_          70 ----DRCRAILALSD   80 (153)
T ss_dssp             ----TTCSEEEECSS
T ss_pred             ----ccCCEEEEccc
Confidence                24577776654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.41  E-value=0.0025  Score=42.59  Aligned_cols=40  Identities=18%  Similarity=0.297  Sum_probs=34.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      +.+++||+++|.|+.. +|..-++.|.+.|++|++++....
T Consensus         7 ~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           7 FCQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence            3578999999999876 999999999999999999886553

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.40  E-value=0.0061  Score=43.90  Aligned_cols=81  Identities=16%  Similarity=0.184  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh-hHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK-SIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~   90 (222)
                      .|.+++|.|+ +|+|...++.+...|+ +|+++++++++++...+ +             +....+   |.++.+ .+.+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l-------------Ga~~~i---~~~~~d~~~~~   88 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L-------------GATECL---NPKDYDKPIYE   88 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T-------------TCSEEE---CGGGCSSCHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c-------------CCcEEE---cCCCchhHHHH
Confidence            5789999986 8999999999988897 89999999988755432 2             222222   333222 2333


Q ss_pred             HHHHHHhhccceeEEEechhhHH
Q psy7936          91 CAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .....  ..+.+|++|-++|...
T Consensus        89 ~~~~~--~~~G~d~vid~~g~~~  109 (174)
T d1p0fa2          89 VICEK--TNGGVDYAVECAGRIE  109 (174)
T ss_dssp             HHHHH--TTSCBSEEEECSCCHH
T ss_pred             HHHHh--cCCCCcEEEEcCCCch
Confidence            32222  2347999999988654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.38  E-value=0.012  Score=42.00  Aligned_cols=80  Identities=18%  Similarity=0.182  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|.|+ |++|...++.+...|+ .|+++++++++++.+.+.              +... ++  |-+ .+.+++.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~--------------ga~~-~i--~~~-~~~~~~~   92 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL--------------GADH-VV--DAR-RDPVKQV   92 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT--------------TCSE-EE--ETT-SCHHHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc--------------ccce-ee--cCc-ccHHHHH
Confidence            4778999886 9999998888877786 788889998876544321              2221 22  222 2334443


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .+..  ....+|++|.++|...
T Consensus        93 ~~~~--~~~g~d~vid~~g~~~  112 (172)
T d1h2ba2          93 MELT--RGRGVNVAMDFVGSQA  112 (172)
T ss_dssp             HHHT--TTCCEEEEEESSCCHH
T ss_pred             HHhh--CCCCceEEEEecCcch
Confidence            3321  1236999999999554

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.34  E-value=0.015  Score=43.72  Aligned_cols=104  Identities=9%  Similarity=0.067  Sum_probs=77.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+++++|=.|+..|.   ++..|++.|.+|+.++.+++.++.+.+.+...          +.++.+++.|+.+..     
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~----------~~~v~~~~~d~~~~~-----   97 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ----------GLKPRLACQDISNLN-----   97 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT----------TCCCEEECCCGGGCC-----
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc----------Cccceeeccchhhhc-----
Confidence            456889999999875   67788899999999999999888777666552          557889999987642     


Q ss_pred             HHHHHhhccceeEEEechhhHH-hh---hHHHHHHHHHhhcCCCCeEEEEEe
Q psy7936          92 AQDINQTEANVHILINNAVYCI-LS---NNILFYSILFYAIPGKNVNVYAVH  139 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~-l~---~~~~~~~~la~~~~~~gI~v~~v~  139 (222)
                            ...++|++++..+... +.   ....+.+.+++-+.+.|+-+..+.
T Consensus        98 ------~~~~fD~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~  143 (246)
T d1y8ca_          98 ------INRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN  143 (246)
T ss_dssp             ------CSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             ------ccccccccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEEEeC
Confidence                  1247899887644333 32   366777888888888887776554

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.27  E-value=0.014  Score=41.21  Aligned_cols=112  Identities=15%  Similarity=0.121  Sum_probs=64.1

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH---H
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA---Q   93 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~---~   93 (222)
                      +-|.|. |-+|..+|+.|++.|++|++++|+.++.+++.+.-....+. ..+.  -.+..++.+=+.+...++.++   +
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~-~~e~--~~~~d~ii~~v~~~~~v~~v~~~~~   78 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETAST-AKAI--AEQCDVIITMLPNSPHVKEVALGEN   78 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSS-HHHH--HHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhccc-HHHH--HhCCCeEEEEcCCHHHHHHHHhCCc
Confidence            445554 77999999999999999999999999887765431100000 0000  001122333445566777665   2


Q ss_pred             HHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEE
Q psy7936          94 DINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~  137 (222)
                      .+.....+=.++|.+.-..+     ..++.++..+.++|+++..
T Consensus        79 ~~~~~~~~g~iiid~sT~~p-----~~~~~~~~~~~~~g~~~vd  117 (161)
T d1vpda2          79 GIIEGAKPGTVLIDMSSIAP-----LASREISDALKAKGVEMLD  117 (161)
T ss_dssp             CHHHHCCTTCEEEECSCCCH-----HHHHHHHHHHHTTTCEEEE
T ss_pred             chhhccCCCCEEEECCCCCH-----HHHHHHHHHHHHcCCceec
Confidence            33333334456665544332     3345666667777777654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.23  E-value=0.0069  Score=42.55  Aligned_cols=50  Identities=18%  Similarity=0.254  Sum_probs=41.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHh
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      +-.++++.|.|+ |.+|..+|..|+..|.  .+++++++++.++....++...
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~   54 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG   54 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhC
Confidence            345678888997 8999999999999885  7999999998877777677653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.14  E-value=0.011  Score=43.28  Aligned_cols=80  Identities=16%  Similarity=0.160  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|.+++|.|+ +++|...+......|+ +|+++++++++++-.. .+             +....+   |-.+ .++.+.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~-------------Ga~~~~---~~~~-~~~~~~   85 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ-------------GFEIAD---LSLD-TPLHEQ   85 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-------------TCEEEE---TTSS-SCHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hc-------------cccEEE---eCCC-cCHHHH
Confidence            5789999986 8999888877777787 8999999988765432 11             323221   2222 344443


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      +.++. ....+|++|.+.|..
T Consensus        86 i~~~t-~g~g~D~vid~vG~~  105 (195)
T d1kola2          86 IAALL-GEPEVDCAVDAVGFE  105 (195)
T ss_dssp             HHHHH-SSSCEEEEEECCCTT
T ss_pred             HHHHh-CCCCcEEEEECcccc
Confidence            33332 234699999998854

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.13  E-value=0.015  Score=41.75  Aligned_cols=81  Identities=17%  Similarity=0.177  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCCh-hhHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASF-KSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~   90 (222)
                      .|.+++|.|+ |+||...++.+-..|+ .|+++++++++++-.. ++             +....+   |.... +....
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~-------------Ga~~~i---~~~~~~~~~~~   89 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-------------GATDCL---NPRELDKPVQD   89 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-------------TCSEEE---CGGGCSSCHHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-Hh-------------CCCccc---CCccchhhhhh
Confidence            5779999975 9999999999999998 7889999998764333 22             222222   22222 23333


Q ss_pred             HHHHHHhhccceeEEEechhhHH
Q psy7936          91 CAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      ..+..  ..+.+|++|.++|...
T Consensus        90 ~~~~~--~~~G~d~vie~~G~~~  110 (174)
T d1e3ia2          90 VITEL--TAGGVDYSLDCAGTAQ  110 (174)
T ss_dssp             HHHHH--HTSCBSEEEESSCCHH
T ss_pred             hHhhh--hcCCCcEEEEecccch
Confidence            33332  2357999999999543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.05  E-value=0.043  Score=41.03  Aligned_cols=102  Identities=12%  Similarity=0.069  Sum_probs=74.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ..+++|=.|+..|   .++..|+++|++|+.++.+++.++.+.+.+...          +.++.+++.|+.+...     
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~----------~~~i~~~~~d~~~l~~-----  102 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER----------NLKIEFLQGDVLEIAF-----  102 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCCEEEESCGGGCCC-----
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc----------cccchheehhhhhccc-----
Confidence            4568999998876   445678889999999999998887777776653          5578899999876531     


Q ss_pred             HHHHhhccceeEEEechhhHHhh---hHHHHHHHHHhhcCCCCeEEEEE
Q psy7936          93 QDINQTEANVHILINNAVYCILS---NNILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~---~~~~~~~~la~~~~~~gI~v~~v  138 (222)
                            ...+|.+++.-+.....   +...+.+.+..-+.+-|+-+..+
T Consensus       103 ------~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii~~  145 (251)
T d1wzna1         103 ------KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF  145 (251)
T ss_dssp             ------CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ------ccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEEEe
Confidence                  24689888764433322   35677777888888777766654

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.04  E-value=0.01  Score=41.88  Aligned_cols=78  Identities=9%  Similarity=-0.073  Sum_probs=48.1

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC---------EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA---------KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~---------~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ++.|+||+|.+|..++..|+..+.         +++..+++.+.++.....+....         ......+...-.+. 
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-   75 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA---------FPLLAGLEATDDPK-   75 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT---------CTTEEEEEEESCHH-
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc---------cccccccccCCchh-
Confidence            799999999999999999998652         23334456666666665555432         11222222221111 


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~  113 (222)
                                +....-|++|..+|...
T Consensus        76 ----------~~~~~advViitaG~~~   92 (154)
T d1y7ta1          76 ----------VAFKDADYALLVGAAPR   92 (154)
T ss_dssp             ----------HHTTTCSEEEECCCCCC
T ss_pred             ----------hhcccccEEEeecCcCC
Confidence                      11235699999998765

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.95  E-value=0.028  Score=39.94  Aligned_cols=81  Identities=15%  Similarity=0.182  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh-HHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS-IRD   90 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~   90 (222)
                      .|.+++|.|+ +|+|...+..+...|. +|+.+++++++++...+ +             +....+   |..+... +.+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~-------------GAd~~i---n~~~~~~~~~~   89 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F-------------GATDFV---NPNDHSEPISQ   89 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-------------TCCEEE---CGGGCSSCHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-c-------------CCcEEE---cCCCcchhHHH
Confidence            5778999986 7788888888888877 89999999988755432 2             222222   3322222 233


Q ss_pred             HHHHHHhhccceeEEEechhhHH
Q psy7936          91 CAQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~  113 (222)
                      .....  ..+.+|++|.++|...
T Consensus        90 ~~~~~--~~~G~d~vid~~G~~~  110 (175)
T d1cdoa2          90 VLSKM--TNGGVDFSLECVGNVG  110 (175)
T ss_dssp             HHHHH--HTSCBSEEEECSCCHH
T ss_pred             HHHhh--ccCCcceeeeecCCHH
Confidence            32222  2247899999999544

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.83  E-value=0.011  Score=43.59  Aligned_cols=44  Identities=30%  Similarity=0.440  Sum_probs=38.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .++.||+++|-| .|.+|..+|+.|.+.|++|++.+.+.+.+...
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            368999999987 67799999999999999999999988776543

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.81  E-value=0.071  Score=38.84  Aligned_cols=102  Identities=9%  Similarity=-0.000  Sum_probs=74.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +.++|=.|+..|.   ++..|++.|++|+.++.+++.++...+.+...          +..+.++..|..+..       
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~----------~~~~~~~~~d~~~l~-------   97 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR----------ESNVEFIVGDARKLS-------   97 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------TCCCEEEECCTTSCC-------
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc----------ccccccccccccccc-------
Confidence            3478999998876   55678889999999999999888877766553          445677778877642       


Q ss_pred             HHHhhccceeEEEechhhHHhh--hHHHHHHHHHhhcCCCCeEEEEE
Q psy7936          94 DINQTEANVHILINNAVYCILS--NNILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~--~~~~~~~~la~~~~~~gI~v~~v  138 (222)
                         -....+|+++++.+...+.  +...+.+.+++-+.+-|.-+...
T Consensus        98 ---~~~~~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~~  141 (226)
T d1ve3a1          98 ---FEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF  141 (226)
T ss_dssp             ---SCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ---ccCcCceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEEE
Confidence               1124789999887766653  46677888888888777655544

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.71  E-value=0.013  Score=41.58  Aligned_cols=76  Identities=17%  Similarity=0.267  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.+++|.|+ |++|...++.+-..|+++++++++.++.+ ..+++             +....   .|..+....    
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l-------------Gad~~---i~~~~~~~~----   87 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL-------------GADEV---VNSRNADEM----   87 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH-------------TCSEE---EETTCHHHH----
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc-------------CCcEE---EECchhhHH----
Confidence            5789999986 89999888777778999999999888764 33333             22221   233333221    


Q ss_pred             HHHHhhccceeEEEechhhHH
Q psy7936          93 QDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~  113 (222)
                         ......+|++|.++|...
T Consensus        88 ---~~~~~~~D~vid~~g~~~  105 (168)
T d1uufa2          88 ---AAHLKSFDFILNTVAAPH  105 (168)
T ss_dssp             ---HTTTTCEEEEEECCSSCC
T ss_pred             ---HHhcCCCceeeeeeecch
Confidence               122247999999988543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.67  E-value=0.014  Score=41.20  Aligned_cols=41  Identities=32%  Similarity=0.376  Sum_probs=34.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETT   54 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   54 (222)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            4678999875 8999998888888899999999999887644

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.66  E-value=0.0071  Score=42.97  Aligned_cols=113  Identities=8%  Similarity=0.005  Sum_probs=64.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH-
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD-   94 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-   94 (222)
                      ++-+.| .|-+|.++|+.|.++|++|.+++|+.++.+.+...-...... ..+.....+  .+..-+.+...++.++.. 
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~-~~e~~~~~d--iii~~v~~~~~~~~v~~~~   78 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARS-ARDAVQGAD--VVISMLPASQHVEGLYLDD   78 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSS-HHHHHTSCS--EEEECCSCHHHHHHHHHST
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccch-hhhhccccC--eeeecccchhhHHHHHhcc
Confidence            455555 477999999999999999999999998877665331110000 000001122  333334555666666543 


Q ss_pred             --HHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEE
Q psy7936          95 --INQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        95 --i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~  137 (222)
                        +.....+=+++|.+.-+.+     ..++.++..+.++|++...
T Consensus        79 ~~~~~~l~~g~iiid~st~~p-----~~~~~~~~~~~~~gi~~~d  118 (162)
T d3cuma2          79 DGLLAHIAPGTLVLECSTIAP-----TSARKIHAAARERGLAMLD  118 (162)
T ss_dssp             TCHHHHSCTTCEEEECSCCCH-----HHHHHHHHHHHHTTCEEEE
T ss_pred             ccccccCCCCCEEEECCCCCH-----HHHHHHHHHHHHCCCcEEe
Confidence              2333323356666554443     3456666677777887665

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.60  E-value=0.022  Score=39.63  Aligned_cols=36  Identities=17%  Similarity=0.181  Sum_probs=31.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKA   51 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~   51 (222)
                      ++.|+||+|.+|..+|..|+..|.  ++++++.+..+.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~   39 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG   39 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccch
Confidence            578999999999999999999886  899999876543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.56  E-value=0.012  Score=42.22  Aligned_cols=37  Identities=22%  Similarity=0.078  Sum_probs=33.0

Q ss_pred             CCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          22 CNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        22 as~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      +.|-+|..+|+.|++.|++|++++|+.++.+++.+.-
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence            5677999999999999999999999999988887653

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.53  E-value=0.018  Score=40.00  Aligned_cols=103  Identities=16%  Similarity=0.116  Sum_probs=57.5

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      ++.|.|+ |.+|..+|..++..+.  ++++++++++.++....++....     .  ..........   +.+       
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~-----~--~~~~~~~~~~---~~~-------   64 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGL-----P--FMGQMSLYAG---DYS-------   64 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSC-----C--CTTCEEEC-----CGG-------
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCc-----c--cCCCeeEeeC---cHH-------
Confidence            4566697 9999999999999986  89999999987655555554321     0  0112222221   111       


Q ss_pred             HHHhhccceeEEEechhhHHhhh---------HHHHHHHHHhh---cCCCCeEEEEEeC
Q psy7936          94 DINQTEANVHILINNAVYCILSN---------NILFYSILFYA---IPGKNVNVYAVHP  140 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~~---------~~~~~~~la~~---~~~~gI~v~~v~P  140 (222)
                          ....-|++|..||......         +...++.++..   +.++++-++.-+|
T Consensus        65 ----~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvtNP  119 (142)
T d1y6ja1          65 ----DVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNP  119 (142)
T ss_dssp             ----GGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSS
T ss_pred             ----HhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEecCh
Confidence                1234599999998776221         44445555443   4456666555454

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.45  E-value=0.0072  Score=42.32  Aligned_cols=37  Identities=22%  Similarity=0.399  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      .+++||++||.|| |.+|..-++.|.+.|++|++++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5689999999999 559999999999999999998643

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.009  Score=49.35  Aligned_cols=82  Identities=20%  Similarity=0.205  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCCCC
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDKKP   72 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~~~   72 (222)
                      .+.+++|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.++...        |.
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~n--------p~  106 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRV--------PN  106 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHS--------TT
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhC--------CC
Confidence            4557999998 6699999999999998 89998752                   124666667777664        56


Q ss_pred             CeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhH
Q psy7936          73 GEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        73 ~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      .++..+..++.+...  .+       +...|++|++....
T Consensus       107 v~i~~~~~~i~~~~~--~~-------~~~~DlVi~~~Dn~  137 (426)
T d1yovb1         107 CNVVPHFNKIQDFND--TF-------YRQFHIIVCGLDSI  137 (426)
T ss_dssp             CCCEEECSCGGGBCH--HH-------HTTCSEEEECCSCH
T ss_pred             CceEeeeccccchHH--HH-------HHhcchheeccCcH
Confidence            677888777765431  22       23569999876543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.36  E-value=0.036  Score=39.24  Aligned_cols=111  Identities=14%  Similarity=0.164  Sum_probs=68.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ...++..++.|.|+ |.+|..+|..|+..|.  .+++++++++.++....++....-     . .+........|.   +
T Consensus        14 ~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~-----~-~~~~~~~~~~d~---~   83 (159)
T d2ldxa1          14 EDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSL-----F-LSTPKIVFGKDY---N   83 (159)
T ss_dssp             CCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTT-----T-CSCCEEEEESSG---G
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcch-----h-cCCCeEEeccch---h
Confidence            34456667888896 8999999999999986  899999999888777777765310     0 111222222222   1


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHHhh---------hHHHHHHHHHhh---cCCCCeEEEEEeC
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCILS---------NNILFYSILFYA---IPGKNVNVYAVHP  140 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~l~---------~~~~~~~~la~~---~~~~gI~v~~v~P  140 (222)
                                 ....-|++|..||.....         .+...++.++..   ..+.+|-++.-.|
T Consensus        84 -----------~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtNP  138 (159)
T d2ldxa1          84 -----------VSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNP  138 (159)
T ss_dssp             -----------GGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSSS
T ss_pred             -----------hhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCCc
Confidence                       113568999999876522         244444444433   3455665544444

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.35  E-value=0.11  Score=35.88  Aligned_cols=104  Identities=9%  Similarity=0.109  Sum_probs=61.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC--EEEEEeCC--hhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA--KVIMACRD--VEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ++.|+||+|.+|..+|..+...+.  .+++++.+  ++..+....++.....       ..........|.   ++    
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~-------~~~~~~i~~~~~---~~----   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA-------YDSNTRVRQGGY---ED----   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT-------TTCCCEEEECCG---GG----
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhccc-------ccCCceEeeCCH---HH----
Confidence            477999999999999999999986  79999864  4444444445544210       112223333332   22    


Q ss_pred             HHHHHhhccceeEEEechhhHH---------hhhHHHHHHHHHhhc---CCCCeEEEEEeC
Q psy7936          92 AQDINQTEANVHILINNAVYCI---------LSNNILFYSILFYAI---PGKNVNVYAVHP  140 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~---------l~~~~~~~~~la~~~---~~~gI~v~~v~P  140 (222)
                         +    ..-|++|..||...         +..+...++.++..+   .++++-++.-.|
T Consensus        68 ---~----~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvtNP  121 (142)
T d1o6za1          68 ---T----AGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNP  121 (142)
T ss_dssp             ---G----TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred             ---h----hhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEecCh
Confidence               1    24599999998655         112455555555444   345554444344

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=95.33  E-value=0.023  Score=40.00  Aligned_cols=46  Identities=17%  Similarity=0.057  Sum_probs=37.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      .+++.|.|+ |.+|..+|..|...+. ++++++.+++.++.....+..
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~   53 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSH   53 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhh
Confidence            456778897 9999999998888885 999999999877777666654

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.28  E-value=0.057  Score=39.52  Aligned_cols=76  Identities=25%  Similarity=0.369  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .+++|+++|=.|+..|.   ++..++..|+ .|+.++.+++.++.+.+.++..          +.+..++..|+...   
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~----------~~~~~~~~~d~~~~---  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF----------KGKFKVFIGDVSEF---  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG----------TTSEEEEESCGGGC---
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc----------CCCceEEECchhhh---
Confidence            46789999988888663   2233456776 8999999999888887776543          55778888886542   


Q ss_pred             HHHHHHHHhhccceeEEEechhh
Q psy7936          89 RDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~  111 (222)
                                ..++|++|.|.-+
T Consensus       107 ----------~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 ----------NSRVDIVIMNPPF  119 (201)
T ss_dssp             ----------CCCCSEEEECCCC
T ss_pred             ----------CCcCcEEEEcCcc
Confidence                      3578999999764

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.26  E-value=0.02  Score=40.90  Aligned_cols=43  Identities=14%  Similarity=0.192  Sum_probs=37.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE   52 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~   52 (222)
                      .++.||+++|.|-+.-+|+-++..|.+.|++|+++.+....+.
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            5689999999999999999999999999999999876665443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.22  E-value=0.077  Score=36.76  Aligned_cols=104  Identities=13%  Similarity=0.033  Sum_probs=59.0

Q ss_pred             EEEEecCCCchHHHHHHHHHh-CC--CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYG-IG--AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~-~g--~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      ++.|+|++|.+|..+|..|+. .+  .++.+.+..+ ..+....++....        ....... ...-.+.+.++   
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~--------~~~~~~~-~~~~~~~~~~~---   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP--------TAVKIKG-FSGEDATPALE---   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSC--------SSCEEEE-ECSSCCHHHHT---
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCc--------cccCCcE-EEcCCCccccC---
Confidence            467999999999999998864 34  4899999764 3444444554421        1112222 12222222211   


Q ss_pred             HHHHhhccceeEEEechhhHH---------hhhHHHHHHHHHhh---cCCCCeEEEEEeC
Q psy7936          93 QDINQTEANVHILINNAVYCI---------LSNNILFYSILFYA---IPGKNVNVYAVHP  140 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~---------l~~~~~~~~~la~~---~~~~gI~v~~v~P  140 (222)
                              .-|++|..+|...         +..+...++.++..   +.++++-++.-+|
T Consensus        69 --------~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtNP  120 (145)
T d2cmda1          69 --------GADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP  120 (145)
T ss_dssp             --------TCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred             --------CCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccCC
Confidence                    3499999999765         22244555554443   3455665544444

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.14  E-value=0.11  Score=37.97  Aligned_cols=101  Identities=14%  Similarity=0.073  Sum_probs=75.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +..+|=.|+..|.-   +..|++.|++|+.++.+++.++...+.+...         ...++.++++|..+.. .     
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~---------~~~~i~~~~~d~~~l~-~-----   77 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGN---------GHQQVEYVQGDAEQMP-F-----   77 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHT---------TCCSEEEEECCC-CCC-S-----
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccc---------cccccccccccccccc-c-----
Confidence            46899899887743   4567888999999999999888776666554         3457889999987652 1     


Q ss_pred             HHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEE
Q psy7936          94 DINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~  136 (222)
                          ..+.+|+++++.....+.+...+.+.+.+-+++-|.-+.
T Consensus        78 ----~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i  116 (231)
T d1vl5a_          78 ----TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLL  116 (231)
T ss_dssp             ----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred             ----cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEE
Confidence                124789999998887777777888888888887774443

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.12  E-value=0.011  Score=43.22  Aligned_cols=41  Identities=15%  Similarity=0.161  Sum_probs=34.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS   56 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   56 (222)
                      +++.|.|+.. .|.++|..|++.|++|.+++|+++..+++.+
T Consensus         8 ~KI~ViGaG~-wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGSGA-FGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECCSH-HHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEECCCH-HHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            4577888765 9999999999999999999999887766543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.06  E-value=0.03  Score=42.29  Aligned_cols=84  Identities=17%  Similarity=0.182  Sum_probs=58.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC-------------------hhHHHHHHHHHHHhhhhhcccCCC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD-------------------VEKAETTASEIRKHFEVATSEDKK   71 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~i~~~~~~~~~~~~~   71 (222)
                      +++++++|.| .||+|..++..|+..|. +++++|.+                   ..+.+.+.+.+++..        |
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~n--------p   98 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN--------P   98 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC--------T
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhh--------c
Confidence            5678999999 57799999999999998 99998742                   235667777777764        5


Q ss_pred             CCeEEEEecCCCChhhHHHHHHHHHhhccceeEEEechhhH
Q psy7936          72 PGEVLIKKLDLASFKSIRDCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        72 ~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~id~li~~ag~~  112 (222)
                      ..++..+...+.+.. .....       ...|++|.+....
T Consensus        99 ~~~i~~~~~~~~~~~-~~~~~-------~~~divid~~d~~  131 (247)
T d1jw9b_          99 HIAITPVNALLDDAE-LAALI-------AEHDLVLDCTDNV  131 (247)
T ss_dssp             TSEEEEECSCCCHHH-HHHHH-------HTSSEEEECCSSH
T ss_pred             ccchhhhhhhhhhcc-ccccc-------cccceeeeccchh
Confidence            666766665555432 22221       2468888776543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.03  E-value=0.089  Score=37.37  Aligned_cols=78  Identities=21%  Similarity=0.246  Sum_probs=55.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ....+++|.|+. -.|++-++.....|++|.+.|.+.+.++++.......             +   .+-.++.+.+.+.
T Consensus        30 v~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~-------------~---~~~~~~~~~l~~~   92 (168)
T d1pjca1          30 VKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR-------------V---ELLYSNSAEIETA   92 (168)
T ss_dssp             BCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG-------------S---EEEECCHHHHHHH
T ss_pred             CCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc-------------c---eeehhhhhhHHHh
Confidence            355688898875 4788899999999999999999999988876655332             1   1223445555544


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                      +.       .-|++|..+-+..
T Consensus        93 ~~-------~aDivI~aalipG  107 (168)
T d1pjca1          93 VA-------EADLLIGAVLVPG  107 (168)
T ss_dssp             HH-------TCSEEEECCCCTT
T ss_pred             hc-------cCcEEEEeeecCC
Confidence            33       3499999987655

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=95.02  E-value=0.099  Score=37.40  Aligned_cols=103  Identities=17%  Similarity=0.061  Sum_probs=60.6

Q ss_pred             EEEEecCCCchHHHHHHHHHhC---CC----EEEEEeCCh--hHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChh
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGI---GA----KVIMACRDV--EKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFK   86 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~---g~----~v~~~~r~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (222)
                      ++.||||+|.||..++..|++.   |.    .+.+.+...  +.++.+..++....        ....-.....  ++  
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a--------~~~~~~~~~~--~~--   93 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL--------YPLLREVSIG--ID--   93 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT--------CTTEEEEEEE--SC--
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccc--------cccccCcccc--cc--
Confidence            6999999999999999999874   22    566666544  45566555555431        1111111111  11  


Q ss_pred             hHHHHHHHHHhhccceeEEEechhhHH---------hhhHHHHHHHHHhhc---CCCCeEEEEE
Q psy7936          87 SIRDCAQDINQTEANVHILINNAVYCI---------LSNNILFYSILFYAI---PGKNVNVYAV  138 (222)
Q Consensus        87 ~v~~~~~~i~~~~~~id~li~~ag~~~---------l~~~~~~~~~la~~~---~~~gI~v~~v  138 (222)
                       ..       +.+...|++|..+|...         +..+....+.++..+   +++++.|..|
T Consensus        94 -~~-------~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv  149 (175)
T d7mdha1          94 -PY-------EVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVV  149 (175)
T ss_dssp             -HH-------HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred             -ch-------hhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEe
Confidence             11       22235699999998775         222455556555543   4456777666

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.02  E-value=0.021  Score=39.84  Aligned_cols=75  Identities=20%  Similarity=0.279  Sum_probs=47.3

Q ss_pred             EEEecCCCchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDI   95 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i   95 (222)
                      +.+.|+ |-+|.++++.|.+.| ++|++++|+.++.+++.++..-....... .-...+++++.+.   +..+..+++++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~-~v~~~Div~lavk---P~~~~~v~~~l   77 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLP-ELHSDDVLILAVK---PQDMEAACKNI   77 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCC-CCCTTSEEEECSC---HHHHHHHHTTC
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccc-cccccceEEEecC---HHHHHHhHHHH
Confidence            556666 789999999999888 79999999999888776653211100000 0112345554433   55666666665


Q ss_pred             H
Q psy7936          96 N   96 (222)
Q Consensus        96 ~   96 (222)
                      .
T Consensus        78 ~   78 (152)
T d1yqga2          78 R   78 (152)
T ss_dssp             C
T ss_pred             h
Confidence            3

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.01  E-value=0.043  Score=40.01  Aligned_cols=84  Identities=13%  Similarity=0.143  Sum_probs=62.0

Q ss_pred             CCCEEE-EecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVI-ITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~l-VtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+.+++ +|-|+||...++...+ . +.+|+.+|++++.++...+.++..          +.++.+++.++++...+.  
T Consensus        23 ~~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~----------~~r~~~~~~~f~~~~~~~--   88 (192)
T d1m6ya2          23 DEKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF----------SDRVSLFKVSYREADFLL--   88 (192)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG----------TTTEEEEECCGGGHHHHH--
T ss_pred             CCCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc----------cccccchhHHHhhHHHHH--
Confidence            344444 7788888888888876 3 468999999999998888777653          568999999998754432  


Q ss_pred             HHHHHhhccceeEEEechhhHH
Q psy7936          92 AQDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~  113 (222)
                       ...  ....+|.++...|+..
T Consensus        89 -~~~--~~~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          89 -KTL--GIEKVDGILMDLGVST  107 (192)
T ss_dssp             -HHT--TCSCEEEEEEECSCCH
T ss_pred             -HHc--CCCCcceeeeccchhH
Confidence             222  1368999999988744

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.00  E-value=0.013  Score=41.24  Aligned_cols=34  Identities=21%  Similarity=0.315  Sum_probs=30.5

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK   50 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~   50 (222)
                      ++.|.|+ |.||..++..|++.|++|.+++|+.+.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            4778888 999999999999999999999998753

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=94.92  E-value=0.081  Score=37.34  Aligned_cols=109  Identities=11%  Similarity=0.144  Sum_probs=67.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .+..+++.|.|+ |.+|..+|..|+..|.  .+++++++++..+....++....-     . .+........|.   +++
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~-----~-~~~~~~~~~~d~---~~~   86 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSL-----F-LQTPKIVADKDY---SVT   86 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG-----G-CCCSEEEECSSG---GGG
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhcccc-----c-cCCCeEEeccch---hhc
Confidence            345567888896 8899999999999986  899999999888777777754210     0 111222222222   221


Q ss_pred             HHHHHHHHhhccceeEEEechhhHHhh---------hHHHHHHHHHhh---cCCCCeEEEEEeC
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCILS---------NNILFYSILFYA---IPGKNVNVYAVHP  140 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l~---------~~~~~~~~la~~---~~~~gI~v~~v~P  140 (222)
                                 ..-|++|..||.....         .+...++.++..   +.+++|-++.-.|
T Consensus        87 -----------~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtNP  139 (160)
T d1i0za1          87 -----------ANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNP  139 (160)
T ss_dssp             -----------TTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             -----------ccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCc
Confidence                       2448999999876511         144444444433   3456676555455

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.026  Score=40.43  Aligned_cols=44  Identities=14%  Similarity=0.206  Sum_probs=38.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE   52 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~   52 (222)
                      ..++.||.++|.|-+.-+|+-++..|.++|++|+++.+....+.
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            35789999999999999999999999999999999887665443

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.86  E-value=0.21  Score=35.18  Aligned_cols=111  Identities=14%  Similarity=0.086  Sum_probs=72.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhc---ccCCCCCeEEEEecCCCChhhHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVAT---SEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .|.++|..|+..|   ..+..|+++|++|+.++.+++.++...+..+.......   ..........++++|+.+...-.
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~   96 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   96 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence            5789999999877   46778899999999999999998887776643210000   00001234467777877654322


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhh--hHHHHHHHHHhhcCCCCeEE
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILS--NNILFYSILFYAIPGKNVNV  135 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~--~~~~~~~~la~~~~~~gI~v  135 (222)
                      .         ...|.++.......+.  +...+.+.++..+++-|.-+
T Consensus        97 ~---------~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~  135 (201)
T d1pjza_          97 I---------GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGL  135 (201)
T ss_dssp             H---------HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred             c---------cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEE
Confidence            2         2568777765554432  35677788888888766443

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.72  E-value=0.32  Score=34.75  Aligned_cols=104  Identities=11%  Similarity=0.086  Sum_probs=73.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+..+|=.|+..|.   .+..|+++|++|+.++.+++.++.+.+.....         .-..+.+...|+.+..-     
T Consensus        30 ~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~---------~~~~~~~~~~d~~~~~~-----   92 (198)
T d2i6ga1          30 APGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAE---------GLDNLQTDLVDLNTLTF-----   92 (198)
T ss_dssp             CSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------TCTTEEEEECCTTTCCC-----
T ss_pred             CCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc---------cccchhhhheecccccc-----
Confidence            45578888886443   55678889999999999999888877666553         22357788888776531     


Q ss_pred             HHHHhhccceeEEEechhhHHhh--hHHHHHHHHHhhcCCCCeEEEEEe
Q psy7936          93 QDINQTEANVHILINNAVYCILS--NNILFYSILFYAIPGKNVNVYAVH  139 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~--~~~~~~~~la~~~~~~gI~v~~v~  139 (222)
                            ...+|.++.+.-...+.  ....+.+.+..-+.+.|+-+....
T Consensus        93 ------~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          93 ------DGEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             ------CCCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ------cccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence                  14689999877665543  356778888888887776555443

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.58  E-value=0.094  Score=38.28  Aligned_cols=72  Identities=26%  Similarity=0.334  Sum_probs=51.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++.||++|=.|+.+|+   ++..++..|+ +|+.++.+++.++...+.+              .++.++.+|+.+.   
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~--------------~~~~~~~~D~~~l---  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC--------------GGVNFMVADVSEI---  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC--------------TTSEEEECCGGGC---
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc--------------ccccEEEEehhhc---
Confidence            56789999999999874   2344666776 7999999988776544332              2456788887542   


Q ss_pred             HHHHHHHHhhccceeEEEechhh
Q psy7936          89 RDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~  111 (222)
                                .+++|++|.|.-+
T Consensus       105 ----------~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 ----------SGKYDTWIMNPPF  117 (197)
T ss_dssp             ----------CCCEEEEEECCCC
T ss_pred             ----------CCcceEEEeCccc
Confidence                      2578999999654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=94.57  E-value=0.29  Score=36.97  Aligned_cols=97  Identities=12%  Similarity=0.059  Sum_probs=67.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+|+++|=.|+.+|+-   +..+++.|++|+.++.+++.++...+.++..          +.+..+++.|+.+       
T Consensus       119 ~~g~~VLDiGcGsG~l---~i~aa~~g~~V~gvDis~~av~~A~~na~~n----------~~~~~~~~~d~~~-------  178 (254)
T d2nxca1         119 RPGDKVLDLGTGSGVL---AIAAEKLGGKALGVDIDPMVLPQAEANAKRN----------GVRPRFLEGSLEA-------  178 (254)
T ss_dssp             CTTCEEEEETCTTSHH---HHHHHHTTCEEEEEESCGGGHHHHHHHHHHT----------TCCCEEEESCHHH-------
T ss_pred             CccCEEEEcccchhHH---HHHHHhcCCEEEEEECChHHHHHHHHHHHHc----------CCceeEEeccccc-------
Confidence            4688999999998862   3456778999999999999998888777653          4456677766421       


Q ss_pred             HHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEE
Q psy7936          92 AQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNV  135 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v  135 (222)
                        ..  ..+++|+++.|.....+   ..+.+.+.+.+++-|.-+
T Consensus       179 --~~--~~~~fD~V~ani~~~~l---~~l~~~~~~~LkpGG~li  215 (254)
T d2nxca1         179 --AL--PFGPFDLLVANLYAELH---AALAPRYREALVPGGRAL  215 (254)
T ss_dssp             --HG--GGCCEEEEEEECCHHHH---HHHHHHHHHHEEEEEEEE
T ss_pred             --cc--cccccchhhhccccccH---HHHHHHHHHhcCCCcEEE
Confidence              11  12579999988544333   455666666676666544

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.54  E-value=0.042  Score=38.75  Aligned_cols=93  Identities=12%  Similarity=0.090  Sum_probs=54.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHHh--hhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRKH--FEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      |+++|.|. |-||..+|+.|.+.|+  +|+.++++.+.++...+.-...  ............++.++...   ...+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p---~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSP---VRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSC---HHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCC---chhhhh
Confidence            46788875 8899999999999986  7999999998877665431100  00000000012244444443   345666


Q ss_pred             HHHHHHhhccceeEEEechhh
Q psy7936          91 CAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~  111 (222)
                      +++++.....+=.+++..+++
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            677766554443455555544

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.49  E-value=0.034  Score=38.84  Aligned_cols=41  Identities=12%  Similarity=0.176  Sum_probs=34.0

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i   58 (222)
                      +.+. |.|-+|.++++.|.+.|+++++++|+.++.+++.+..
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            3344 4567999999999999999999999999888876654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.46  E-value=0.08  Score=34.93  Aligned_cols=69  Identities=16%  Similarity=0.200  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .+.++.|.|+.+ +|+-++....+.|+++++++.+++....                  ..--.++..|+.|.+.+.+++
T Consensus        10 ~~~kigIlGgGQ-L~rMla~aA~~lG~~v~v~d~~~~~PA~------------------~va~~~i~~~~~d~~~l~~~~   70 (111)
T d1kjqa2          10 AATRVMLLGSGE-LGKEVAIECQRLGVEVIAVDRYADAPAM------------------HVAHRSHVINMLDGDALRRVV   70 (111)
T ss_dssp             TCCEEEEESCSH-HHHHHHHHHHTTTCEEEEEESSTTCGGG------------------GGSSEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEEeCCH-HHHHHHHHHHHCCCEEEEEcCCCCCchh------------------hcCCeEEECCCCCHHHHHHHH
Confidence            345799999665 9999999999999999999987653211                  011246778999988888877


Q ss_pred             HHHHhhccceeEE
Q psy7936          93 QDINQTEANVHIL  105 (222)
Q Consensus        93 ~~i~~~~~~id~l  105 (222)
                      ...     .+|++
T Consensus        71 ~~~-----~~Dvi   78 (111)
T d1kjqa2          71 ELE-----KPHYI   78 (111)
T ss_dssp             HHH-----CCSEE
T ss_pred             Hhh-----CCceE
Confidence            653     44555

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.33  E-value=0.065  Score=37.16  Aligned_cols=45  Identities=24%  Similarity=0.279  Sum_probs=35.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChh--HHHHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVE--KAETTASEIRK   60 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~--~~~~~~~~i~~   60 (222)
                      ++.|+||+|.+|..+|..|+.+|.  +++++++++.  .++....++..
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~   50 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYD   50 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchh
Confidence            478999999999999999999984  9999998763  44545555544

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.04  E-value=0.19  Score=36.48  Aligned_cols=101  Identities=17%  Similarity=0.087  Sum_probs=64.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHH--------HHHHHHHhhhhhcccCCCCCeEEEEecC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAET--------TASEIRKHFEVATSEDKKPGEVLIKKLD   81 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~~D   81 (222)
                      .++.||++.|.|-. .||+.+|+.+...|.+|+..++......+        +.+.++            ..+++.+.+.
T Consensus        39 ~el~gk~vgIiG~G-~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~l~~~l~------------~sDii~~~~p  105 (197)
T d1j4aa1          39 REVRDQVVGVVGTG-HIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYK------------QADVISLHVP  105 (197)
T ss_dssp             CCGGGSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHH------------HCSEEEECSC
T ss_pred             ccccCCeEEEeccc-ccchhHHHhHhhhcccccccCcccccccccceeeecccccccc------------ccccccccCC
Confidence            45789999999865 59999999999999999999865432111        111121            2367777777


Q ss_pred             CCChhhHHHHH-HHHHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          82 LASFKSIRDCA-QDINQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        82 ~~~~~~v~~~~-~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                      ++...  +.++ ++..+. -+-+.++-|++-..+++-..+.+.|..
T Consensus       106 lt~~T--~~li~~~~l~~-mk~~a~lIN~sRG~ivde~aL~~aL~~  148 (197)
T d1j4aa1         106 DVPAN--VHMINDESIAK-MKQDVVIVNVSRGPLVDTDAVIRGLDS  148 (197)
T ss_dssp             CCGGG--TTCBSHHHHHH-SCTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred             ccccc--cccccHHHHhh-hCCccEEEecCchhhhhhHHHHHHHhc
Confidence            66432  1111 111111 244677777777778887777777654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.01  E-value=0.059  Score=38.50  Aligned_cols=39  Identities=28%  Similarity=0.295  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      ..++.||.++|.|-|.=+|+-+|..|.++|++|+.+..+
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            347899999999999999999999999999999988754

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.83  E-value=0.27  Score=35.99  Aligned_cols=101  Identities=11%  Similarity=0.042  Sum_probs=67.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.++|-.|+.+|--.++..++......|+.++.+++.++...+.++..         .-.++.++..|..+..      
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~---------~~~n~~~~~~d~~~~~------  139 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL---------GIENVIFVCGDGYYGV------  139 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT---------TCCSEEEEESCGGGCC------
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhh---------cccccccccCchHHcc------
Confidence            5668999998877655555455545568999999999888888888765         3456777777765421      


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEE
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v  138 (222)
                          ...+++|.++.+++...+.      +.+...+++-|.-|..+
T Consensus       140 ----~~~~~fD~I~~~~~~~~~p------~~l~~~LkpGG~lv~pv  175 (213)
T d1dl5a1         140 ----PEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPI  175 (213)
T ss_dssp             ----GGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEB
T ss_pred             ----ccccchhhhhhhccHHHhH------HHHHHhcCCCcEEEEEE
Confidence                1225799999988765432      23445566656554433

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.71  E-value=0.51  Score=32.35  Aligned_cols=80  Identities=9%  Similarity=0.136  Sum_probs=55.9

Q ss_pred             CCCCCEEEEecCCCc-hHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          11 RLDGKTVIITGCNTG-IGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        11 ~~~~k~~lVtGas~g-iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++|+.+|=.|+.+| +|.+    .+.+|+ +|+.++.+.+.++.+.+.++...        ...++.+++.|...    
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~--------~~~~~~ii~~D~~~----   75 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTK--------AENRFTLLKMEAER----   75 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTT--------CGGGEEEECSCHHH----
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcc--------cccchhhhcccccc----
Confidence            467899886666644 5553    456776 89999999999888888876642        23468888888543    


Q ss_pred             HHHHHHHHhhccceeEEEechhh
Q psy7936          89 RDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~  111 (222)
                        +++   ....+.|+++.++.+
T Consensus        76 --~l~---~~~~~fDiIf~DPPy   93 (152)
T d2esra1          76 --AID---CLTGRFDLVFLDPPY   93 (152)
T ss_dssp             --HHH---HBCSCEEEEEECCSS
T ss_pred             --ccc---ccccccceeEechhh
Confidence              222   233578999998653

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.68  E-value=0.091  Score=39.36  Aligned_cols=47  Identities=21%  Similarity=0.343  Sum_probs=40.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHH
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE   57 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   57 (222)
                      .+|.||+++|-|- |.+|..+|+.|.+.|++|++.+.+...+.++...
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            4589999988875 5599999999999999999999998887766554

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=93.49  E-value=0.088  Score=36.18  Aligned_cols=43  Identities=14%  Similarity=0.159  Sum_probs=34.4

Q ss_pred             EEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      +.|+|| |.+|..++..|+..|.  ++++++++++.++.....+..
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~   47 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYE   47 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhc
Confidence            567796 8999999999999984  899999999876655545433

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=93.44  E-value=0.076  Score=36.60  Aligned_cols=109  Identities=13%  Similarity=0.055  Sum_probs=63.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      |++.|.|+ |.+|..+|..|+..+. ++++++.+++..+....++......  .    +.......+  .+.+++     
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~--~----~~~~~i~~~--~d~~~~-----   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPI--E----GFDVRVTGT--NNYADT-----   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHH--H----TCCCCEEEE--SCGGGG-----
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccc--c----CCCCEEEec--CcHHHh-----
Confidence            46777796 9999999999998876 9999999888766665555432110  0    111111111  111111     


Q ss_pred             HHHhhccceeEEEechhhHHh---------hhHHHHHHHHHhhc---CCCCeEEEEEeCCcc
Q psy7936          94 DINQTEANVHILINNAVYCIL---------SNNILFYSILFYAI---PGKNVNVYAVHPGIV  143 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~l---------~~~~~~~~~la~~~---~~~gI~v~~v~PG~v  143 (222)
                            ..-|++|.+||....         ..+..+++.+..++   .++++-++.-.|--+
T Consensus        68 ------~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvtNPvDv  123 (142)
T d1uxja1          68 ------ANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDA  123 (142)
T ss_dssp             ------TTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECSSSHHH
T ss_pred             ------cCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeCCchHH
Confidence                  245899999987651         11455555555544   446676665455433

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.35  E-value=0.19  Score=34.84  Aligned_cols=110  Identities=15%  Similarity=0.019  Sum_probs=67.1

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDIN   96 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~   96 (222)
                      +-+.|. |-+|..+|+.|.+.|+.+ +..|+.++..+..+........  .+..  .+...+...+.+.+.+....+.+.
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~i~~~~~~~~v~~~~~~l~   76 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVP--LERV--AEARVIFTCLPTTREVYEVAEALY   76 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECC--GGGG--GGCSEEEECCSSHHHHHHHHHHHT
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccc--cccc--cceeEEEecccchhhhhhhhcccc
Confidence            445665 779999999999988755 5788888777766654322110  0000  112222234455567777777776


Q ss_pred             hhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEE
Q psy7936          97 QTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        97 ~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~  137 (222)
                      ....+-.++|.+.-..     -..++.++.++.++|++...
T Consensus        77 ~~~~~~~~iid~sT~~-----p~~~~~~~~~~~~~gi~~ld  112 (156)
T d2cvza2          77 PYLREGTYWVDATSGE-----PEASRRLAERLREKGVTYLD  112 (156)
T ss_dssp             TTCCTTEEEEECSCCC-----HHHHHHHHHHHHTTTEEEEE
T ss_pred             ccccccccccccccCC-----HHHHHHHHHHHHHcCCeEEe
Confidence            6655556666664333     33456677777788887553

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.33  E-value=0.1  Score=38.54  Aligned_cols=109  Identities=9%  Similarity=0.112  Sum_probs=72.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhh--------cccCCCCCeEEEEecCCCC
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVA--------TSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~~~~D~~~   84 (222)
                      .+.+||..|+..|   ..+..|++.|++|+.++-+++.++.+.+.........        ........++.++++|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            5678999999876   4578889999999999999998877766543321100        0001124567888888765


Q ss_pred             hhhHHHHHHHHHhhccceeEEEechhhHHhh--hHHHHHHHHHhhcCCCCe
Q psy7936          85 FKSIRDCAQDINQTEANVHILINNAVYCILS--NNILFYSILFYAIPGKNV  133 (222)
Q Consensus        85 ~~~v~~~~~~i~~~~~~id~li~~ag~~~l~--~~~~~~~~la~~~~~~gI  133 (222)
                      ...         ...+.+|+++.......+.  ....+.+.+..-+++-|.
T Consensus       122 l~~---------~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~  163 (229)
T d2bzga1         122 LPR---------TNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQ  163 (229)
T ss_dssp             GGG---------SCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEE
T ss_pred             ccc---------cccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcce
Confidence            432         1225678887766555442  256777888888877664

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.33  E-value=0.042  Score=37.03  Aligned_cols=70  Identities=14%  Similarity=0.209  Sum_probs=48.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      |.++|.|. +.+|+.+++.|.  |..+++++.+++..+...    .            ..+.++..|.++++.++++  .
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~------------~~~~~i~Gd~~~~~~L~~a--~   59 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----R------------SGANFVHGDPTRVSDLEKA--N   59 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----H------------TTCEEEESCTTSHHHHHHT--T
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----h------------cCccccccccCCHHHHHHh--h
Confidence            45778886 669999999984  556788888888765442    1            1356778999998777763  1


Q ss_pred             HHhhccceeEEEech
Q psy7936          95 INQTEANVHILINNA  109 (222)
Q Consensus        95 i~~~~~~id~li~~a  109 (222)
                      +    .+-+.+|...
T Consensus        60 i----~~A~~vi~~~   70 (129)
T d2fy8a1          60 V----RGARAVIVNL   70 (129)
T ss_dssp             C----TTCSEEEECC
T ss_pred             h----hcCcEEEEec
Confidence            1    2446666554

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.32  E-value=0.28  Score=36.08  Aligned_cols=99  Identities=14%  Similarity=0.058  Sum_probs=69.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.++|..|+.+|--.++.-+|+  |.+|+.+.++++-.+...+.+.+.         .-.++.++..|..+-       
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~---------g~~nv~~~~gd~~~g-------  139 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA---------GVKNVHVILGDGSKG-------  139 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT---------TCCSEEEEESCGGGC-------
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc---------CCceeEEEECccccC-------
Confidence            46689999999888777777776  457999999988777777777765         356899999997642       


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEE
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v  138 (222)
                         ....+++|.++.+++...+.      ..|-..+++-|.-|.-|
T Consensus       140 ---~~~~~pfD~Iiv~~a~~~ip------~~l~~qL~~gGrLv~pv  176 (215)
T d1jg1a_         140 ---FPPKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPV  176 (215)
T ss_dssp             ---CGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEE
T ss_pred             ---CcccCcceeEEeecccccCC------HHHHHhcCCCCEEEEEE
Confidence               12346899999988876532      22334455555544444

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=93.30  E-value=0.33  Score=35.60  Aligned_cols=103  Identities=13%  Similarity=0.028  Sum_probs=74.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.++|=.|+..|.   ++..|++.+.+|+.++.++..++...+.+...         +-.++.+++.|..+.. ..   
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~---------~~~~~~~~~~d~~~~~-~~---   79 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEK---------GVENVRFQQGTAESLP-FP---   79 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHH---------TCCSEEEEECBTTBCC-SC---
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccc---------cccccccccccccccc-cc---
Confidence            46688989988774   34566777889999999999888777776654         2346888898887642 11   


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEE
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~  137 (222)
                            .+.+|+++++-....+.+...+.+.+.+-+++.|.-+.+
T Consensus        80 ------~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          80 ------DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             ------TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ------ccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEE
Confidence                  247898888877666666778888888888877755443

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.29  E-value=0.25  Score=33.22  Aligned_cols=75  Identities=9%  Similarity=0.159  Sum_probs=53.4

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEE-eCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMA-CRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQD   94 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   94 (222)
                      ++.|.|++|-+|+.+++.+.+.|+.++.. +++...          ..        ...++   ..|++.++...+.++.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----------~~--------~~~DV---vIDFS~p~~~~~~l~~   60 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----------EL--------DSPDV---VIDFSSPEALPKTVDL   60 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----------EC--------SCCSE---EEECSCGGGHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----------Hh--------ccCCE---EEEecCHHHHHHHHHH
Confidence            47899999999999999999999876643 433210          00        12233   4599999999999888


Q ss_pred             HHhhccceeEEEechhhHH
Q psy7936          95 INQTEANVHILINNAVYCI  113 (222)
Q Consensus        95 i~~~~~~id~li~~ag~~~  113 (222)
                      ..+.  ++-+++-..|...
T Consensus        61 ~~~~--~~p~ViGTTG~~~   77 (128)
T d1vm6a3          61 CKKY--RAGLVLGTTALKE   77 (128)
T ss_dssp             HHHH--TCEEEECCCSCCH
T ss_pred             HHhc--CCCEEEEcCCCCH
Confidence            7665  4567777777443

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.18  E-value=0.13  Score=35.84  Aligned_cols=45  Identities=16%  Similarity=0.160  Sum_probs=36.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      .++.|.|+ |.+|..+|..|...+. ++++++++++..+....++..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~   49 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSH   49 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhh
Confidence            46778896 8999999998888876 999999999877766666654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.17  E-value=0.14  Score=36.76  Aligned_cols=104  Identities=18%  Similarity=0.174  Sum_probs=65.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH-----HHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS-----EIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      ..+.+|++.|.| .|.||+.+++.+...|.+|+..++..........     .+.+..        ...+++.+.|.++.
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell--------~~sDiv~~~~Plt~  110 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLL--------ARADFISVHLPKTP  110 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHH--------HHCSEEEECCCCST
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHH--------hhCCEEEEcCCCCc
Confidence            457899998888 5779999999999999999999986543222111     011111        12367778887775


Q ss_pred             hhhHHHHHH-HHHhhccceeEEEechhhHHhhhHHHHHHHHH
Q psy7936          85 FKSIRDCAQ-DINQTEANVHILINNAVYCILSNNILFYSILF  125 (222)
Q Consensus        85 ~~~v~~~~~-~i~~~~~~id~li~~ag~~~l~~~~~~~~~la  125 (222)
                      ..  +.+++ +..+. -+-+.++-|.|-..+++-..+.+.|.
T Consensus       111 ~T--~~lin~~~l~~-mk~~a~lIN~sRG~iVde~aL~~aL~  149 (184)
T d1ygya1         111 ET--AGLIDKEALAK-TKPGVIIVNAARGGLVDEAALADAIT  149 (184)
T ss_dssp             TT--TTCBCHHHHTT-SCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred             hh--hhhhhHHHHhh-hCCCceEEEecchhhhhhHHHHHHHh
Confidence            42  22222 11111 24577777777777777666666553

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.10  E-value=0.067  Score=45.17  Aligned_cols=34  Identities=18%  Similarity=0.178  Sum_probs=29.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeC
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACR   46 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r   46 (222)
                      |.+.+++|.|+ +|+|.++++.|+..|. +++++|.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            34568999987 7899999999999997 8999875

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.05  E-value=0.31  Score=37.88  Aligned_cols=100  Identities=18%  Similarity=0.066  Sum_probs=64.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+||++|-.|+..|+   ++..+++.|+ +|+.++.++. .....+.++...        ...++.+++.|+.+...   
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~--------~~~~v~~~~~~~~~~~~---   96 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANK--------LDHVVTIIKGKVEEVEL---   96 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTT--------CTTTEEEEESCTTTCCC---
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhC--------CccccceEeccHHHccc---
Confidence            478999999999875   4556777886 7999998764 444444444321        24568898988877531   


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhh---HHHHHHHHHhhcCCCCe
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSN---NILFYSILFYAIPGKNV  133 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~---~~~~~~~la~~~~~~gI  133 (222)
                             ...++|+++.......+.+   +..+.+...+-+++.|+
T Consensus        97 -------~~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~  135 (316)
T d1oria_          97 -------PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGL  135 (316)
T ss_dssp             -------SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEE
T ss_pred             -------ccceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeE
Confidence                   1247899987654443332   45566666666666553

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.01  E-value=0.21  Score=39.11  Aligned_cols=110  Identities=8%  Similarity=-0.009  Sum_probs=68.0

Q ss_pred             CCCCEEEEecCC-CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCN-TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      ..|+++|=.++. ||++.+    ++..+.+|+.++.++..++.+.+.++..         +-.++.+++.|..+      
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~n---------gl~~~~~i~~d~~~------  204 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLN---------GLGNVRVLEANAFD------  204 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHT---------TCTTEEEEESCHHH------
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHc---------CCCCcceeeccHHH------
Confidence            468888866665 444443    3444569999999999999888887763         12357788777654      


Q ss_pred             HHHHHHhhccceeEEEechhhHHhh-----h----HHHHHHHHHhhcCCCCeEEEEEeC
Q psy7936          91 CAQDINQTEANVHILINNAVYCILS-----N----NILFYSILFYAIPGKNVNVYAVHP  140 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~-----~----~~~~~~~la~~~~~~gI~v~~v~P  140 (222)
                      +.+...+...++|.+|.++......     .    ...+......-+++-|+-+.+-|.
T Consensus       205 ~~~~~~~~~~~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         205 LLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             HHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             HhhhhHhhhcCCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            3333334446899999987543311     1    223333334445566766665554

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=92.96  E-value=0.71  Score=30.11  Aligned_cols=82  Identities=15%  Similarity=0.255  Sum_probs=54.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      ||++||.--..-+...+...|-+.|++|+..+.+.+..   .+.+++.          ..++.++-.++-+... -++++
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a---l~~~~~~----------~~dliilD~~mp~~~G-~e~~~   66 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREA---VEKYKEL----------KPDIVTMDITMPEMNG-IDAIK   66 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHH----------CCSEEEEECSCGGGCH-HHHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHH---HHHHHhc----------cCCEEEEecCCCCCCH-HHHHH
Confidence            68899998888888888888989999887666555433   2333332          3356665555555543 45777


Q ss_pred             HHHhhccceeEEEech
Q psy7936          94 DINQTEANVHILINNA  109 (222)
Q Consensus        94 ~i~~~~~~id~li~~a  109 (222)
                      ++++....+-+++..+
T Consensus        67 ~ir~~~~~~pvi~ls~   82 (118)
T d1u0sy_          67 EIMKIDPNAKIIVCSA   82 (118)
T ss_dssp             HHHHHCTTCCEEEEEC
T ss_pred             HHHHhCCCCcEEEEEc
Confidence            7777666666666653

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.90  E-value=0.084  Score=38.46  Aligned_cols=38  Identities=24%  Similarity=0.128  Sum_probs=31.3

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      +.|. |.|-+|..+|..|++.|++|++++.+.+..+.+.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            3444 6677999999999999999999999988766543

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=92.84  E-value=0.56  Score=35.43  Aligned_cols=103  Identities=7%  Similarity=0.015  Sum_probs=73.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+.++|=.|+..|.   ++..|+++ |++|+.++-++..++...+......        ...++.++.+|..+.. .   
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~g--------l~~~v~~~~~d~~~l~-~---  131 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAG--------LADNITVKYGSFLEIP-C---  131 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHT--------CTTTEEEEECCTTSCS-S---
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccc--------cccccccccccccccc-c---
Confidence            46789988887553   33444443 7899999999988877776665542        2457899999987642 1   


Q ss_pred             HHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEE
Q psy7936          92 AQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~  136 (222)
                            ..+.+|+++.+-....+.+...+.+.+..-+++-|.-+.
T Consensus       132 ------~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~  170 (282)
T d2o57a1         132 ------EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAI  170 (282)
T ss_dssp             ------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred             ------cccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEE
Confidence                  124789999887777777777888888888888775443

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.83  E-value=0.68  Score=32.69  Aligned_cols=96  Identities=17%  Similarity=0.114  Sum_probs=63.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.++|=.|+.+|   .++..|++.+.+|+.++.+++.++...+.++...        -..++.++++|..+.       
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~g--------l~~~v~~~~gda~~~-------   94 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHG--------LGDNVTLMEGDAPEA-------   94 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTT--------CCTTEEEEESCHHHH-------
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcC--------CCcceEEEECchhhc-------
Confidence            5678887888766   3344566677799999999999999988887752        234788888874221       


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCC
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKN  132 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~g  132 (222)
                         ......+|.++.+.+...   ...+.+.+...+.+.|
T Consensus        95 ---~~~~~~~D~v~~~~~~~~---~~~~~~~~~~~LkpgG  128 (186)
T d1l3ia_          95 ---LCKIPDIDIAVVGGSGGE---LQEILRIIKDKLKPGG  128 (186)
T ss_dssp             ---HTTSCCEEEEEESCCTTC---HHHHHHHHHHTEEEEE
T ss_pred             ---ccccCCcCEEEEeCcccc---chHHHHHHHHHhCcCC
Confidence               122357888888765432   2444555555555544

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.79  E-value=0.12  Score=37.21  Aligned_cols=106  Identities=12%  Similarity=0.006  Sum_probs=68.0

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH-------HHHHhhhhhcccCCCCCeEEEEecC
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS-------EIRKHFEVATSEDKKPGEVLIKKLD   81 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~-------~i~~~~~~~~~~~~~~~~~~~~~~D   81 (222)
                      ..+++++++.|.|. |.||.++++.+...|.+|+..++..........       .+....        ...+++.+.+.
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l--------~~sD~v~~~~p  109 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMY--------PVCDVVTLNCP  109 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHG--------GGCSEEEECSC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHH--------Hhccchhhccc
Confidence            45688999999985 569999999999999999999975321111110       111111        24577888888


Q ss_pred             CCChhhHHHHHH-HHHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          82 LASFKSIRDCAQ-DINQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        82 ~~~~~~v~~~~~-~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                      +++.  -+.+++ +..+. -+-+.++-|.+-..+++-..+.+.|..
T Consensus       110 lt~~--T~~li~~~~l~~-mk~ga~lIN~aRG~ivd~~aL~~aL~~  152 (188)
T d2naca1         110 LHPE--TEHMINDETLKL-FKRGAYIVNTARGKLCDRDAVARALES  152 (188)
T ss_dssp             CCTT--TTTCBSHHHHTT-SCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred             cccc--chhhhHHHHHHh-CCCCCEEEecCchhhhhHHHHHHHHhC
Confidence            7763  222222 11122 255778888888888887777776643

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=92.78  E-value=0.18  Score=34.70  Aligned_cols=44  Identities=14%  Similarity=0.277  Sum_probs=36.4

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      ++.|.|+ |.+|..+|..|+.+|.  ++++++++++.++....++..
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~   48 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH   48 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHh
Confidence            4567797 9999999999999986  899999999887766666655

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=92.73  E-value=0.76  Score=34.91  Aligned_cols=79  Identities=19%  Similarity=0.227  Sum_probs=53.8

Q ss_pred             CEEEEecCCCch-HHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          15 KTVIITGCNTGI-GKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        15 k~~lVtGas~gi-G~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      ++++-.|+++|+ +.+++ +  ...++|+.++.+++.++-..+.++...        -..++.+...|+.+.        
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~--------~~~~~~i~~~~~~~~--------  172 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHG--------VSDRFFVRKGEFLEP--------  172 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTT--------CTTSEEEEESSTTGG--------
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcC--------CCceeEEeecccccc--------
Confidence            456656666654 44443 3  245799999999999988888887642        234677788888643        


Q ss_pred             HHHhhccceeEEEechhhHH
Q psy7936          94 DINQTEANVHILINNAVYCI  113 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~~  113 (222)
                       .....+++|++|.|.-+..
T Consensus       173 -~~~~~~~fDlIVsNPPYI~  191 (271)
T d1nv8a_         173 -FKEKFASIEMILSNPPYVK  191 (271)
T ss_dssp             -GGGGTTTCCEEEECCCCBC
T ss_pred             -cccccCcccEEEEcccccC
Confidence             2233478999999976544

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=92.70  E-value=0.44  Score=35.41  Aligned_cols=105  Identities=9%  Similarity=0.020  Sum_probs=71.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .++++|=.|+..|   ..+..+++.|. +|+.++.+++.++.+.+..+...        ...++.++++|.....-    
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~--------~~~~v~f~~~D~~~~~~----   88 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMK--------RRFKVFFRAQDSYGRHM----   88 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSC--------CSSEEEEEESCTTTSCC----
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcC--------CCcceEEEEcchhhhcc----
Confidence            4678998888866   23455666675 89999999999888877665431        24578999999754311    


Q ss_pred             HHHHHhhccceeEEEechhhHHhh----hHHHHHHHHHhhcCCCCeEEEE
Q psy7936          92 AQDINQTEANVHILINNAVYCILS----NNILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~----~~~~~~~~la~~~~~~gI~v~~  137 (222)
                           .....+|+++++-+.....    .+..+.+.+..-+.+.|+-+.+
T Consensus        89 -----~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          89 -----DLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             -----CCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             -----cccccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence                 1224689998887766542    2455666677777776765443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.47  E-value=0.27  Score=33.46  Aligned_cols=77  Identities=9%  Similarity=0.126  Sum_probs=51.3

Q ss_pred             EEEEecCCCchHHHHHHHHHhC-CCEEEE-EeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGI-GAKVIM-ACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~-g~~v~~-~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      ++.|.|++|-+|+.+++.+.+. ++.++. +++... +..    +..          .+.++   ..|++.++.+...++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~----~~~----------~~~Dv---vIDFS~p~~~~~~~~   62 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSL----LTD----------GNTEV---VIDFTHPDVVMGNLE   62 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THH----HHT----------TTCSE---EEECCCTTTHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhh----hcc----------ccCCE---EEEcccHHHHHHHHH
Confidence            4789999999999999988775 455544 344321 111    111          12343   459999999999988


Q ss_pred             HHHhhccceeEEEechhhH
Q psy7936          94 DINQTEANVHILINNAVYC  112 (222)
Q Consensus        94 ~i~~~~~~id~li~~ag~~  112 (222)
                      .+.+.  .+-++|-..|..
T Consensus        63 ~~~~~--~~~~ViGTTG~~   79 (135)
T d1yl7a1          63 FLIDN--GIHAVVGTTGFT   79 (135)
T ss_dssp             HHHHT--TCEEEECCCCCC
T ss_pred             HHHhc--CCCEEEeccccc
Confidence            88765  456677776643

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.43  E-value=0.4  Score=31.23  Aligned_cols=34  Identities=24%  Similarity=0.273  Sum_probs=28.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      |.++|.|| |-+|.++|..|.+.|.+|.++.|.+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            67778876 46999999999999999999987653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.42  E-value=0.15  Score=35.90  Aligned_cols=39  Identities=36%  Similarity=0.554  Sum_probs=34.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      ..+.||+++|.|-. -+|+.+|+.+...|++|++++.++-
T Consensus        20 ~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~   58 (163)
T d1li4a1          20 VMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPI   58 (163)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             ceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccc
Confidence            45789999999865 6999999999999999999999874

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.33  E-value=0.16  Score=34.70  Aligned_cols=44  Identities=25%  Similarity=0.294  Sum_probs=35.4

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      ++.|.|+ |.+|..++..++..+.  ++++++++++.++....++..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~   47 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH   47 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccc
Confidence            3556796 8899999999998874  899999999887766666554

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.28  E-value=0.17  Score=34.81  Aligned_cols=44  Identities=14%  Similarity=0.068  Sum_probs=35.7

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC--EEEEEeCChhHHHHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      ++.|.|+ |.+|..+|..|+..|.  ++++++++++..+....++..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~   47 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAH   47 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhh
Confidence            3567786 9999999999998875  799999999887766666654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.19  E-value=0.37  Score=37.20  Aligned_cols=76  Identities=21%  Similarity=0.221  Sum_probs=52.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      +++|+||-.|+..|+   ++..+++.|+ +|+.++.++... ...+.+....        ...++.+++.|+.+...   
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~~--------~~~~i~~~~~~~~~l~~---   98 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLNK--------LEDTITLIKGKIEEVHL---   98 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHTT--------CTTTEEEEESCTTTSCC---
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHhC--------CCccceEEEeeHHHhcC---
Confidence            578999999999876   5666777887 899999887543 3344443321        24578888888776531   


Q ss_pred             HHHHHHhhccceeEEEech
Q psy7936          91 CAQDINQTEANVHILINNA  109 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~a  109 (222)
                             ...++|+++...
T Consensus        99 -------~~~~~D~Ivse~  110 (311)
T d2fyta1          99 -------PVEKVDVIISEW  110 (311)
T ss_dssp             -------SCSCEEEEEECC
T ss_pred             -------ccccceEEEEee
Confidence                   124788888754

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.78  E-value=0.42  Score=33.84  Aligned_cols=42  Identities=19%  Similarity=0.245  Sum_probs=31.2

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      ++.|.|+ |..|.++|..|++.|.+|.+++|..+.  +..+.+..
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            3557776 569999999999999999999986542  33444443

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.74  E-value=0.31  Score=32.24  Aligned_cols=33  Identities=24%  Similarity=0.219  Sum_probs=28.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      |.++|.|| |-||.++|..|.+.|.+|.++.+++
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            57777776 4699999999999999999998754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.58  E-value=0.13  Score=35.50  Aligned_cols=35  Identities=11%  Similarity=0.071  Sum_probs=27.8

Q ss_pred             EEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHH
Q psy7936          18 IITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAET   53 (222)
Q Consensus        18 lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   53 (222)
                      -|. +.|-+|.++|+.|.++|++|++.+++......
T Consensus         4 giI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           4 GFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             EEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             EEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            344 45889999999999999999998877654433

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.51  E-value=0.2  Score=36.19  Aligned_cols=105  Identities=17%  Similarity=0.123  Sum_probs=65.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHH-------HHHHhhhhhcccCCCCCeEEEEecCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTAS-------EIRKHFEVATSEDKKPGEVLIKKLDL   82 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~-------~i~~~~~~~~~~~~~~~~~~~~~~D~   82 (222)
                      .++.||++.|.|.. .||+.+++.+...|.+|+..++..........       .+....        ...+++.+.+.+
T Consensus        43 ~~l~g~tvgIiG~G-~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll--------~~sD~v~l~~pl  113 (191)
T d1gdha1          43 EKLDNKTLGIYGFG-SIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLL--------SVSQFFSLNAPS  113 (191)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHH--------HHCSEEEECCCC
T ss_pred             ceecccceEEeecc-cchHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHH--------hhCCeEEecCCC
Confidence            56789999999865 59999999999999999999875432111110       011111        123677777877


Q ss_pred             CChhhHHHHHHH-HHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          83 ASFKSIRDCAQD-INQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        83 ~~~~~v~~~~~~-i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                      +...  +.+++. ..+. -+-+.++-|.+-..+++-..+.+.|..
T Consensus       114 t~~T--~~li~~~~l~~-mk~~a~lIN~sRG~ivde~aL~~aL~~  155 (191)
T d1gdha1         114 TPET--RYFFNKATIKS-LPQGAIVVNTARGDLVDNELVVAALEA  155 (191)
T ss_dssp             CTTT--TTCBSHHHHTT-SCTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred             CchH--hheecHHHhhC-cCCccEEEecCCccchhhHHHHHHHHc
Confidence            6532  222221 1111 255778888888888887777776644

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.36  E-value=0.29  Score=35.41  Aligned_cols=102  Identities=15%  Similarity=0.102  Sum_probs=66.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHH----------HHHHHHHHhhhhhcccCCCCCeEEEE
Q psy7936           9 ASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAE----------TTASEIRKHFEVATSEDKKPGEVLIK   78 (222)
Q Consensus         9 ~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~----------~~~~~i~~~~~~~~~~~~~~~~~~~~   78 (222)
                      ...+.||++.|.|. |.||+.+|+.+...|.+|+..++......          ++.+.+.            ..+++.+
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~------------~sD~i~~  110 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLF------------HSDCVTL  110 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHH------------HCSEEEE
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhhccccccchhhccc------------cCCEEEE
Confidence            35689999999976 55999999999999999999987532111          1222222            2367777


Q ss_pred             ecCCCChhhHHHHHH-HHHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          79 KLDLASFKSIRDCAQ-DINQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        79 ~~D~~~~~~v~~~~~-~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                      .|.++....  .+++ +..+. -+-+.++-|.+-..+++-..+.+.|..
T Consensus       111 ~~plt~~T~--~li~~~~l~~-mk~~a~lIN~sRG~ivde~aL~~aL~~  156 (193)
T d1mx3a1         111 HCGLNEHNH--HLINDFTVKQ-MRQGAFLVNTARGGLVDEKALAQALKE  156 (193)
T ss_dssp             CCCCCTTCT--TSBSHHHHTT-SCTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred             eecccccch--hhhhHHHHhc-cCCCCeEEecCCceEEcHHHHHHHHHc
Confidence            787765321  1211 11111 255777778887788887777777654

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.30  E-value=1.7  Score=30.72  Aligned_cols=104  Identities=12%  Similarity=0.022  Sum_probs=70.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ..++++|=.|+..|   .++..+++.+.+|++++.++...+.+.+.++...       ..+.++.++..|+.+.  +.  
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~-------l~~~~i~~~~~d~~~~--~~--  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNN-------LDNYDIRVVHSDLYEN--VK--  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-------CTTSCEEEEECSTTTT--CT--
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhC-------CccceEEEEEcchhhh--hc--
Confidence            46788998888766   3345566777899999999988887777665531       0244688888997642  11  


Q ss_pred             HHHHHhhccceeEEEechhhHHhhh-HHHHHHHHHhhcCCCCeEEE
Q psy7936          92 AQDINQTEANVHILINNAVYCILSN-NILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~-~~~~~~~la~~~~~~gI~v~  136 (222)
                             ...+|.+++|..+..... ...+.+.+.+.+.+.|+-+.
T Consensus       117 -------~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i  155 (194)
T d1dusa_         117 -------DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWV  155 (194)
T ss_dssp             -------TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             -------cCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEE
Confidence                   147899999876443222 35566667777776665543

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.28  E-value=0.18  Score=34.75  Aligned_cols=37  Identities=22%  Similarity=0.126  Sum_probs=29.5

Q ss_pred             CCCEEEEe-cCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          13 DGKTVIIT-GCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        13 ~~k~~lVt-Gas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      .++.++|. .+.+.||.++|..|+++|++|.++.+...
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            45555555 45578999999999999999999988653

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.23  E-value=0.37  Score=33.30  Aligned_cols=45  Identities=11%  Similarity=0.083  Sum_probs=31.6

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC-------EEEEEeCCh--hHHHHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA-------KVIMACRDV--EKAETTASEIRK   60 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~i~~   60 (222)
                      ++.|+||+|.+|..++..|+..+.       .+++.+.+.  +.++.+..++..
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~   58 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD   58 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcc
Confidence            688999999999999999986532       566766544  445554444433

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.22  E-value=1  Score=34.96  Aligned_cols=111  Identities=10%  Similarity=-0.012  Sum_probs=67.5

Q ss_pred             CCCEEEEecCC-CchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCN-TGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas-~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+++|=.++. |+++..    ++..|+ +|+.++.+++.++...+.++...        -..++.+++.|+.+      
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ng--------l~~~~~~~~~d~~~------  206 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNG--------VEDRMKFIVGSAFE------  206 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTT--------CGGGEEEEESCHHH------
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcC--------CCccceeeechhhh------
Confidence            47888877766 444443    345676 89999999999988888776631        12367777777642      


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhh---------HHHHHHHHHhhcCCCCeEEEEEeCC
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSN---------NILFYSILFYAIPGKNVNVYAVHPG  141 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~---------~~~~~~~la~~~~~~gI~v~~v~PG  141 (222)
                      ..........++|++|.++.......         ...+.+....-+++-|+-+.+-+..
T Consensus       207 ~~~~~~~~~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~  266 (324)
T d2as0a2         207 EMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ  266 (324)
T ss_dssp             HHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred             hhHHHHhccCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence            33333444468999999876544211         1222232333344556666665443

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.91  E-value=0.17  Score=33.57  Aligned_cols=36  Identities=22%  Similarity=0.189  Sum_probs=30.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      .+|.++|.|| |-+|.++|..|.+.|.+|.++.+++.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3577878776 56999999999999999999988653

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.87  E-value=0.18  Score=33.57  Aligned_cols=35  Identities=23%  Similarity=0.208  Sum_probs=29.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      ++|.++|.|| |.+|.++|..|++.|.+|.++.+..
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4678888865 5799999999999999999998754

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.84  E-value=0.48  Score=36.46  Aligned_cols=24  Identities=21%  Similarity=0.343  Sum_probs=20.7

Q ss_pred             CCchHHHHHHHHHhCCCEEEEEeC
Q psy7936          23 NTGIGKVTAQTLYGIGAKVIMACR   46 (222)
Q Consensus        23 s~giG~~~a~~l~~~g~~v~~~~r   46 (222)
                      ||-+|.++|+.+..+|++|+++.+
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             chHHHHHHHHHHHHcCCEEEEEec
Confidence            356899999999999999988853

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.84  E-value=0.64  Score=30.42  Aligned_cols=33  Identities=18%  Similarity=0.106  Sum_probs=28.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      +.++|.|| |-||.++|..|++.|.+|.++.++.
T Consensus        23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            56778876 4699999999999999999998753

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=90.81  E-value=0.62  Score=30.47  Aligned_cols=34  Identities=18%  Similarity=0.176  Sum_probs=28.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      .|.++|.|| |-+|.++|..|...|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            467777776 4599999999999999999999853

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.56  E-value=0.64  Score=30.23  Aligned_cols=33  Identities=24%  Similarity=0.235  Sum_probs=27.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      |.++|.|| |-+|.++|..|.+.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            46667765 5699999999999999999998854

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.49  E-value=0.62  Score=30.76  Aligned_cols=33  Identities=24%  Similarity=0.275  Sum_probs=28.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      |.++|.||. -||.++|..|.+.|.+|+++.|++
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            678888875 599999999999999999999864

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.42  E-value=0.75  Score=33.31  Aligned_cols=103  Identities=11%  Similarity=-0.034  Sum_probs=70.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .++++|=.|+..|.   ++..|++. +.+|+.++-+++.++...+.+...         ....+.++++|+.+..     
T Consensus        60 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~---------~~~~~~f~~~d~~~~~-----  122 (222)
T d2ex4a1          60 GTSCALDCGAGIGR---ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEE---------GKRVRNYFCCGLQDFT-----  122 (222)
T ss_dssp             CCSEEEEETCTTTH---HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGG---------GGGEEEEEECCGGGCC-----
T ss_pred             CCCEEEEeccCCCH---hhHHHHHhcCCEEEEeecCHHHhhccccccccc---------cccccccccccccccc-----
Confidence            45678888887664   34444444 448999999999888877666543         2346788999987642     


Q ss_pred             HHHHHhhccceeEEEechhhHHhhh--HHHHHHHHHhhcCCCCeEEEE
Q psy7936          92 AQDINQTEANVHILINNAVYCILSN--NILFYSILFYAIPGKNVNVYA  137 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~--~~~~~~~la~~~~~~gI~v~~  137 (222)
                           -....+|+++.+.....+.+  ...+.+.++.-+.+.|.-+..
T Consensus       123 -----~~~~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~  165 (222)
T d2ex4a1         123 -----PEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIK  165 (222)
T ss_dssp             -----CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -----cccccccccccccccccchhhhhhhHHHHHHHhcCCcceEEEE
Confidence                 11257899998877666544  456777888888777755443

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.39  E-value=0.21  Score=36.59  Aligned_cols=34  Identities=32%  Similarity=0.388  Sum_probs=28.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      +.|.|+|.||. =.|..+|..|+++|++|.++.|+
T Consensus         5 ~~~kVvVIGaG-iaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLGSG-VIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHCCCCEEEEeCC
Confidence            45678888875 36999999999999999999874

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=90.35  E-value=0.58  Score=34.50  Aligned_cols=102  Identities=10%  Similarity=-0.021  Sum_probs=72.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHh-CCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYG-IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|+.+|=.|+..|   .++..|++ .|+.|+.++-++..++...+......        .+.++.+...|+.+..     
T Consensus        33 pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~g--------l~~~v~~~~~d~~~~~-----   96 (245)
T d1nkva_          33 PGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELG--------VSERVHFIHNDAAGYV-----   96 (245)
T ss_dssp             TTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTT--------CTTTEEEEESCCTTCC-----
T ss_pred             CCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhh--------ccccchhhhhHHhhcc-----
Confidence            4778888888766   23445554 47899999999988877666655542        3457899999987631     


Q ss_pred             HHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEE
Q psy7936          92 AQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~  136 (222)
                            ..+++|.+++.-....+.+...+.+.+.+-+++-|.-+.
T Consensus        97 ------~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i  135 (245)
T d1nkva_          97 ------ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLI  135 (245)
T ss_dssp             ------CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEE
T ss_pred             ------ccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEE
Confidence                  124789999888877777777888888887876664443

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.33  E-value=0.41  Score=34.23  Aligned_cols=102  Identities=13%  Similarity=-0.007  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhH-------HHHHHHHHHHhhhhhcccCCCCCeEEEEecCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEK-------AETTASEIRKHFEVATSEDKKPGEVLIKKLDL   82 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~   82 (222)
                      .++.++++.|.| .|.||+.+|+.+...|.+|+..++....       ..++.+.++            ..+++.+.|.+
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~------------~sDii~i~~pl  106 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLN------------MSDVVSLHVPE  106 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHH------------HCSEEEECCCS
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHh------------hccceeecccC
Confidence            467899999885 5679999999999999999999875321       111222222            23677777776


Q ss_pred             CChhhHHHHHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          83 ASFKSIRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        83 ~~~~~v~~~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                      +... ..-+-++..+.. +-+.++-|.+-..+++-..+.+.|..
T Consensus       107 t~~T-~~li~~~~l~~m-k~~a~lIN~aRG~lvde~aL~~aL~~  148 (188)
T d1sc6a1         107 NPST-KNMMGAKEISLM-KPGSLLINASRGTVVDIPALADALAS  148 (188)
T ss_dssp             STTT-TTCBCHHHHHHS-CTTEEEEECSCSSSBCHHHHHHHHHT
T ss_pred             Ccch-hhhccHHHHhhC-CCCCEEEEcCcHHhhhhHHHHHHHHc
Confidence            6532 111111112222 44677777777777777777776644

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=90.29  E-value=0.82  Score=34.61  Aligned_cols=106  Identities=12%  Similarity=0.114  Sum_probs=74.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHh---CCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYG---IGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      ++.++|=.|+..|   .++..|++   .|.+|+.++.+++.++...+.+...          +.++.+.+.|+.+..   
T Consensus        27 ~~~~ILDiGcG~G---~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~----------~~~~~f~~~d~~~~~---   90 (281)
T d2gh1a1          27 KPVHIVDYGCGYG---YLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL----------PYDSEFLEGDATEIE---   90 (281)
T ss_dssp             SCCEEEEETCTTT---HHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSS----------SSEEEEEESCTTTCC---
T ss_pred             CcCEEEEecCcCC---HHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccc----------ccccccccccccccc---
Confidence            4457888887765   23334443   4679999999999888777766553          457889999987642   


Q ss_pred             HHHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeCCcc
Q psy7936          90 DCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPGIV  143 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~PG~v  143 (222)
                              ....+|+++++.....+.+...+.+.+.+.+++-| .+.++.|-+.
T Consensus        91 --------~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG-~lii~~~~~~  135 (281)
T d2gh1a1          91 --------LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGG-KIICFEPHWI  135 (281)
T ss_dssp             --------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEE-EEEEEECCHH
T ss_pred             --------ccCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCc-EEEEEECCcc
Confidence                    11368999999887777777777888887776654 5556666643

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.23  E-value=0.14  Score=38.26  Aligned_cols=33  Identities=24%  Similarity=0.200  Sum_probs=27.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      +|+|+|.||. --|+.+|..|++.|++|+++.++
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCC
Confidence            5788888875 35788999999999999999764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.03  E-value=0.08  Score=34.46  Aligned_cols=43  Identities=12%  Similarity=0.081  Sum_probs=33.6

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936           6 AVSASRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus         6 ~~~~~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      +.+..++.||+++|.|++. -|..+|..|+..+.++++..|...
T Consensus        24 y~~~~~f~gK~VlVVG~g~-Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          24 FREPELFVGESVLVVGGAS-SANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             CCCGGGGTTCCEEEECSSH-HHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             CcchhhcCCCeEEEECCCC-CHHHHHHHHHHhcCEEEEEEecCc
Confidence            4455668999999999874 678899999998887777776543

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=90.03  E-value=0.096  Score=37.87  Aligned_cols=31  Identities=26%  Similarity=0.285  Sum_probs=27.3

Q ss_pred             CEEEEecCCCchHHH-----HHHHHHhCCCEEEEEe
Q psy7936          15 KTVIITGCNTGIGKV-----TAQTLYGIGAKVIMAC   45 (222)
Q Consensus        15 k~~lVtGas~giG~~-----~a~~l~~~g~~v~~~~   45 (222)
                      |.+.|||..+|+|+-     +|+.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            689999999899876     7889999999998876

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.60  E-value=1.6  Score=31.92  Aligned_cols=107  Identities=18%  Similarity=0.120  Sum_probs=72.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|..+|-.|+.+|--.++.-++.....+|+.++++++.++...+.+++..-...    ...++.+...|.....      
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~----~~~~~~~~~gD~~~~~------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLL----SSGRVQLVVGDGRMGY------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHH----HTSSEEEEESCGGGCC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccc----cccceEEEEeeccccc------
Confidence            467999999999987777777877777999999999988888777765320000    1235667777764321      


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEe
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVH  139 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~  139 (222)
                          ....++|.++.+++...+-      ..+...+++-|+-|..|-
T Consensus       146 ----~~~~~fD~I~~~~~~~~ip------~~l~~~LkpGG~LV~pv~  182 (224)
T d1i1na_         146 ----AEEAPYDAIHVGAAAPVVP------QALIDQLKPGGRLILPVG  182 (224)
T ss_dssp             ----GGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred             ----chhhhhhhhhhhcchhhcC------HHHHhhcCCCcEEEEEEc
Confidence                1235899999998765432      234556666666666553

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=89.42  E-value=0.31  Score=34.83  Aligned_cols=104  Identities=15%  Similarity=0.136  Sum_probs=62.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHH-HHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAET-TASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      .+.||++.|.|... ||+.+++.+...|.+|+..+|+...... ....+.+..        ...+++.+.+.+++. + +
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell--------~~sDiv~~~~pl~~~-t-~  107 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEAL--------REARAAVCALPLNKH-T-R  107 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHH--------TTCSEEEECCCCSTT-T-T
T ss_pred             cccCceEEEecccc-ccccceeeeeccccccccccccccccceeeeechhhhh--------hccchhhcccccccc-c-c
Confidence            47899999999876 9999999999999999999986531100 000111111        234666666666532 2 1


Q ss_pred             HHH-HHHHhhccceeEEEechhhHHhhhHHHHHHHHHh
Q psy7936          90 DCA-QDINQTEANVHILINNAVYCILSNNILFYSILFY  126 (222)
Q Consensus        90 ~~~-~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~  126 (222)
                      .++ ++..+.. +-+.++.|+|-..+++-..+.+.|..
T Consensus       108 ~li~~~~l~~m-k~~ailIN~~RG~ivd~~aL~~aL~~  144 (181)
T d1qp8a1         108 GLVKYQHLALM-AEDAVFVNVGRAEVLDRDGVLRILKE  144 (181)
T ss_dssp             TCBCHHHHTTS-CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred             cccccceeeec-cccceEEeccccccccchhhhhhccc
Confidence            121 1112222 34556666666667776777776654

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=89.41  E-value=0.85  Score=33.58  Aligned_cols=99  Identities=12%  Similarity=0.038  Sum_probs=63.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      .|.++|-.|+.+|--.++   |++.+.+|+.+.++++..+...+.+..           ..++.++..|...-.      
T Consensus        70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~~-----------~~nv~~~~~d~~~g~------  129 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLSY-----------YNNIKLILGDGTLGY------  129 (224)
T ss_dssp             TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHTT-----------CSSEEEEESCGGGCC------
T ss_pred             ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHhc-----------ccccccccCchhhcc------
Confidence            566899999988754443   455567899999998877666554432           347888888875411      


Q ss_pred             HHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeCC
Q psy7936          93 QDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHPG  141 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~PG  141 (222)
                          ...+++|.++.+++...+.      ..|-..+++-|.-|.-+..+
T Consensus       130 ----~~~~pfD~Iiv~~a~~~ip------~~l~~qLk~GGrLV~pvg~~  168 (224)
T d1vbfa_         130 ----EEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG  168 (224)
T ss_dssp             ----GGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred             ----hhhhhHHHHHhhcchhhhh------HHHHHhcCCCCEEEEEEcCC
Confidence                1236899999988765432      23344566556655544433

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=88.91  E-value=0.44  Score=33.92  Aligned_cols=39  Identities=18%  Similarity=0.192  Sum_probs=32.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      +..++|.++|.||. -.|.+.|..|+++|++|++..++..
T Consensus        39 ~~~~~k~V~IIGaG-PAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          39 PAVQKKNLAVVGAG-PAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCSSCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCCcEEEEECcc-HHHHHHHHHHHhhccceEEEeccCc
Confidence            34567889999875 4789999999999999999998654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=88.78  E-value=3.5  Score=31.70  Aligned_cols=113  Identities=8%  Similarity=-0.023  Sum_probs=67.9

Q ss_pred             CCCEEEEecCC-CchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCN-TGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas-~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|+.+|=..+. ||++.+    .+..|+ .|+.++.+...++...+.++...       ....++.+++.|+-+      
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~-------l~~~~~~~i~~d~~~------  206 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANH-------LDMANHQLVVMDVFD------  206 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTT-------CCCTTEEEEESCHHH------
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhc-------ccCcceEEEEccHHH------
Confidence            57888865555 444433    445677 79999999999888887776431       012467888888742      


Q ss_pred             HHHHHHhhccceeEEEechhhHHhhh---------HHHHHHHHHhhcCCCCeEEEEEeCCc
Q psy7936          91 CAQDINQTEANVHILINNAVYCILSN---------NILFYSILFYAIPGKNVNVYAVHPGI  142 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag~~~l~~---------~~~~~~~la~~~~~~gI~v~~v~PG~  142 (222)
                      +++...+...++|++|..+-...-..         ...+.+....-+++-|+-+.+.|...
T Consensus       207 ~l~~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs~~  267 (317)
T d2b78a2         207 YFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN  267 (317)
T ss_dssp             HHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred             HHHHHHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence            33444445568999999865433111         22233333334556677777665433

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=88.63  E-value=0.38  Score=31.46  Aligned_cols=36  Identities=19%  Similarity=0.268  Sum_probs=30.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      ..+|.++|.|+ |-+|.++|..|.+.|.+|.++.|.+
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            35688888876 4699999999999999999998864

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=88.63  E-value=0.43  Score=34.14  Aligned_cols=44  Identities=20%  Similarity=0.162  Sum_probs=35.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASE   57 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   57 (222)
                      ..-.++|.||. -.|++-++-....|+.|.+.|.+.+.++++.+.
T Consensus        28 ~pa~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          28 PPARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQVESL   71 (183)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred             CCcEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            34578888875 478888888889999999999999988777644

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.39  E-value=0.84  Score=29.98  Aligned_cols=32  Identities=25%  Similarity=0.366  Sum_probs=26.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      +.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45667765 569999999999999999999875

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=88.36  E-value=0.23  Score=36.04  Aligned_cols=38  Identities=34%  Similarity=0.397  Sum_probs=33.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      .++.||++.|.|.. .||+.+|+.+...|.+|+..++..
T Consensus        41 ~~l~~ktvgIiG~G-~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMGTG-HIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceeeeeeecc-cccccccccccccceeeeccCCcc
Confidence            46789999999875 599999999999999999998754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.33  E-value=0.26  Score=32.54  Aligned_cols=34  Identities=29%  Similarity=0.240  Sum_probs=28.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      +|.++|.|| |-+|.++|..|.+.|.+|.++.|++
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            356777776 5699999999999999999998864

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.29  E-value=0.19  Score=35.50  Aligned_cols=34  Identities=12%  Similarity=0.160  Sum_probs=27.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCCh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDV   48 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~   48 (222)
                      +|+++|.||. -.|..+|..|+++|+ +|++..|+.
T Consensus         4 ~~kVaIIGaG-paGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAG-PASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCS-HHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECCh-HHHHHHHHHHHHCCCCeEEEEEecC
Confidence            4677788764 478999999999998 598988764

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=88.13  E-value=1.7  Score=31.37  Aligned_cols=100  Identities=5%  Similarity=-0.015  Sum_probs=67.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      +.++.+|=.|+..|.   +++.|++.|++|+.++.+++.++...+..             ...+.+++.|+.+..     
T Consensus        19 ~~~~~VLDiGcG~G~---~~~~l~~~g~~v~giD~s~~~i~~a~~~~-------------~~~~~~~~~~~~~~~-----   77 (225)
T d2p7ia1          19 FRPGNLLELGSFKGD---FTSRLQEHFNDITCVEASEEAISHAQGRL-------------KDGITYIHSRFEDAQ-----   77 (225)
T ss_dssp             CCSSCEEEESCTTSH---HHHHHTTTCSCEEEEESCHHHHHHHHHHS-------------CSCEEEEESCGGGCC-----
T ss_pred             CCCCcEEEEeCCCcH---HHHHHHHcCCeEEEEeCcHHHhhhhhccc-------------ccccccccccccccc-----
Confidence            457788888877653   35678888999999999988776554321             335778888876542     


Q ss_pred             HHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhh-cCCCCeEEEEE
Q psy7936          92 AQDINQTEANVHILINNAVYCILSNNILFYSILFYA-IPGKNVNVYAV  138 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~-~~~~gI~v~~v  138 (222)
                            ....+|++++......+.+...+.+.+... +.+-|+-+..+
T Consensus        78 ------~~~~fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~~  119 (225)
T d2p7ia1          78 ------LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVC  119 (225)
T ss_dssp             ------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             ------cccccccccccceeEecCCHHHHHHHHHHHhcCCCceEEEEe
Confidence                  124789999877666666666777777654 45555555443

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.06  E-value=2.3  Score=27.64  Aligned_cols=83  Identities=17%  Similarity=0.252  Sum_probs=53.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      |+..++||.--...+...+...|-+.|++|.....-.+.+    +.+++          ...++...-..+-+...+ ++
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~----~~l~~----------~~~dlii~D~~mp~~~G~-el   65 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVL----AALAS----------KTPDVLLSDIRMPGMDGL-AL   65 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHHH----HHHTT----------CCCSEEEECCSSSSSTTH-HH
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHH----HHHHh----------CCCCEEEehhhcCCchHH-HH
Confidence            3556899999999999999999999999988655443333    23322          133555544444444444 46


Q ss_pred             HHHHHhhccceeEEEech
Q psy7936          92 AQDINQTEANVHILINNA  109 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~a  109 (222)
                      +.++++.+..+-+++..+
T Consensus        66 ~~~l~~~~~~~piI~~t~   83 (123)
T d1krwa_          66 LKQIKQRHPMLPVIIMTA   83 (123)
T ss_dssp             HHHHHHHSSSCCEEESCC
T ss_pred             HHHHHHhCCCCeEEEEec
Confidence            777777666665665554

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=87.91  E-value=0.29  Score=37.04  Aligned_cols=35  Identities=31%  Similarity=0.396  Sum_probs=30.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC   45 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~   45 (222)
                      .+++||+++|.| .|-+|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            468999999998 68899999999999999887653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.84  E-value=0.4  Score=35.92  Aligned_cols=35  Identities=43%  Similarity=0.561  Sum_probs=30.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC   45 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~   45 (222)
                      .+++||+++|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            368999999987 67799999999999999887665

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=87.83  E-value=1.5  Score=30.12  Aligned_cols=43  Identities=21%  Similarity=0.250  Sum_probs=31.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCC--CEEEEEe--CChhHHHHHHHH
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIG--AKVIMAC--RDVEKAETTASE   57 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~--r~~~~~~~~~~~   57 (222)
                      |++.|.|+||.||..+..-+.++.  ++|+.+.  +|.+.+.+...+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~   48 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLE   48 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHH
Confidence            578999999999999988887763  5666553  555555554444

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.82  E-value=1.4  Score=28.44  Aligned_cols=34  Identities=18%  Similarity=0.137  Sum_probs=25.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHh---CCCEEEEEeCCh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYG---IGAKVIMACRDV   48 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~---~g~~v~~~~r~~   48 (222)
                      .+.++|.|| |.+|.++|..|..   .|.+|.++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            367888888 7799999966554   456899998754

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=87.70  E-value=0.96  Score=34.36  Aligned_cols=78  Identities=15%  Similarity=0.122  Sum_probs=54.4

Q ss_pred             CCEEEEecCCCc-hHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          14 GKTVIITGCNTG-IGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        14 ~k~~lVtGas~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +..++=.|+.+| ||.+++..+-  ..+|+.++.++..++-..+.++...         -.++.+++.|+.+.-      
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~p--~~~v~avDis~~Al~~A~~Na~~~~---------~~~v~~~~~d~~~~~------  171 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASERP--DCEIIAVDRMPDAVSLAQRNAQHLA---------IKNIHILQSDWFSAL------  171 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHCT--TSEEEEECSSHHHHHHHHHHHHHHT---------CCSEEEECCSTTGGG------
T ss_pred             ccceeeeehhhhHHHHHHHhhCC--cceeeeccchhHHHhHHHHHHHHhC---------cccceeeeccccccc------
Confidence            345666666644 4666655442  3699999999999988888887652         336899999986532      


Q ss_pred             HHHHhhccceeEEEechhhHH
Q psy7936          93 QDINQTEANVHILINNAVYCI  113 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~~~  113 (222)
                           ...++|++|.|.-+.+
T Consensus       172 -----~~~~fDlIvsNPPYi~  187 (274)
T d2b3ta1         172 -----AGQQFAMIVSNPPYID  187 (274)
T ss_dssp             -----TTCCEEEEEECCCCBC
T ss_pred             -----CCCceeEEEecchhhh
Confidence                 1247999999976543

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.64  E-value=3.4  Score=31.78  Aligned_cols=83  Identities=11%  Similarity=-0.054  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCCc-hHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTG-IGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .++.+|=..+.+| ++.    .+++.|++|+.++.+...++...+.++...       ....++.+++.|+.+      +
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~-------~~~~~~~~i~~D~~~------~  194 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAG-------LEQAPIRWICEDAMK------F  194 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHT-------CTTSCEEEECSCHHH------H
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhc-------ccCCcEEEEeCCHHH------h
Confidence            4667886655544 333    445678999999999999888887765431       023468888877643      3


Q ss_pred             HHHHHhhccceeEEEechhhH
Q psy7936          92 AQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~  112 (222)
                      ++...+...++|++|.+.-.+
T Consensus       195 l~~~~~~~~~fD~IilDPP~f  215 (309)
T d2igta1         195 IQREERRGSTYDIILTDPPKF  215 (309)
T ss_dssp             HHHHHHHTCCBSEEEECCCSE
T ss_pred             HHHHhhcCCCCCEEEECCCcc
Confidence            444444456899999986533

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=87.58  E-value=0.27  Score=33.93  Aligned_cols=35  Identities=20%  Similarity=0.294  Sum_probs=29.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCC--EEEEEeCCh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGA--KVIMACRDV   48 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~--~v~~~~r~~   48 (222)
                      .||+++|.||.- .|..+|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGgG~-~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGT-GGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSH-HHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccH-HHHHHHHHHHHcCCCCcEEEEECCC
Confidence            489999999864 78999999999875  888888765

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.51  E-value=0.27  Score=37.07  Aligned_cols=37  Identities=27%  Similarity=0.369  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCCchHHHH-----HHHHHhCCCEEEEEeCChh
Q psy7936          13 DGKTVIITGCNTGIGKVT-----AQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~-----a~~l~~~g~~v~~~~r~~~   49 (222)
                      .++.++|+.|-||.|+.+     |..|++.|++|.+++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            467788888899999985     7899999999999987753

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.44  E-value=0.76  Score=31.72  Aligned_cols=81  Identities=27%  Similarity=0.261  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCC---CChhhHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDL---ASFKSIR   89 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~   89 (222)
                      .|+.+.|.+.++|.|--++-.+...|.++  ..-+++..+++.+.+            |.....--.+|+   .+.+...
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~l------------p~~~~~~NPlD~~~~~~~~~~~   67 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFL------------PPMAAVKNPVDMIASARGEDYY   67 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHS------------CTTCEESSEEECCTTCCHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhC------------CCcccCCCcccccCCCCHHHHH
Confidence            47888899999999999999999998655  344555554444443            222222223333   3345566


Q ss_pred             HHHHHHHhhccceeEEEec
Q psy7936          90 DCAQDINQTEANVHILINN  108 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~  108 (222)
                      ++++.+.+. +.+|.++..
T Consensus        68 ~~l~~~~~d-~~vd~v~v~   85 (163)
T d2csua3          68 RTAKLLLQD-PNVDMLIAI   85 (163)
T ss_dssp             HHHHHHHHS-TTCSEEEEE
T ss_pred             HHHHHHHcC-CCcCEEEEe
Confidence            666665443 567765543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.29  E-value=2.9  Score=28.03  Aligned_cols=35  Identities=14%  Similarity=0.141  Sum_probs=30.6

Q ss_pred             CCCEEEEecCC---CchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          13 DGKTVIITGCN---TGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        13 ~~k~~lVtGas---~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      +.|++.|.|+|   +..|..+++.|.+.|++|+.+..+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~   55 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK   55 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence            46899999999   579999999999999999888654

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.22  E-value=0.25  Score=36.03  Aligned_cols=34  Identities=29%  Similarity=0.391  Sum_probs=29.3

Q ss_pred             CCEEEEecCCCchHHH-----HHHHHHhCCCEEEEEeCC
Q psy7936          14 GKTVIITGCNTGIGKV-----TAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        14 ~k~~lVtGas~giG~~-----~a~~l~~~g~~v~~~~r~   47 (222)
                      +|++.|+|+.||.|+.     +|..|++.|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            5789999999999876     677888999999999854

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.85  E-value=1.7  Score=33.56  Aligned_cols=77  Identities=21%  Similarity=0.205  Sum_probs=48.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .+|+++|-.|+..|+   ++..++++|+ +|+.++.++ .+....+.++...        ...++.+++.|+.+..-   
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~--------~~~~i~~i~~~~~~l~~---  101 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNG--------FSDKITLLRGKLEDVHL---  101 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTT--------CTTTEEEEESCTTTSCC---
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhC--------ccccceEEEeehhhccC---
Confidence            468999999999874   3556677887 899999775 3433344443322        24467777777765420   


Q ss_pred             HHHHHHhhccceeEEEechh
Q psy7936          91 CAQDINQTEANVHILINNAV  110 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~ag  110 (222)
                             ...++|+++...-
T Consensus       102 -------~~~~~D~i~se~~  114 (328)
T d1g6q1_         102 -------PFPKVDIIISEWM  114 (328)
T ss_dssp             -------SSSCEEEEEECCC
T ss_pred             -------cccceeEEEEEec
Confidence                   1136777776543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=86.85  E-value=0.29  Score=34.54  Aligned_cols=45  Identities=16%  Similarity=0.144  Sum_probs=28.0

Q ss_pred             EEEEecCCCchHHHHHHHHHhC-----CCEEEEEeCChhHHHHHHHHHHH
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGI-----GAKVIMACRDVEKAETTASEIRK   60 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~-----g~~v~~~~r~~~~~~~~~~~i~~   60 (222)
                      ++.|.||.+.....+...++..     +.+++++|.++++++.....+..
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~   54 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDV   54 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHH
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHH
Confidence            4667787654333344444432     23899999999988766555544

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=86.79  E-value=2.7  Score=27.11  Aligned_cols=81  Identities=12%  Similarity=0.285  Sum_probs=51.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQ   93 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   93 (222)
                      +|++||.--...+-..+.+.|-+.|++|.... +.+.   ..+.+++.          ..++.++-..+-+...+ ++++
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~-~g~e---al~~~~~~----------~~dlillD~~mP~~~G~-el~~   65 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAA-NGLQ---ALDIVTKE----------RPDLVLLDMKIPGMDGI-EILK   65 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHH---HHHHHHHH----------CCSEEEEESCCTTCCHH-HHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeC-CHHH---HHHHHHhC----------CCCEEEEeccCCCCCHH-HHHH
Confidence            46788988888888888898989999887544 3332   23333332          33555555555555443 4677


Q ss_pred             HHHhhccceeEEEech
Q psy7936          94 DINQTEANVHILINNA  109 (222)
Q Consensus        94 ~i~~~~~~id~li~~a  109 (222)
                      ++++....+-+++..+
T Consensus        66 ~lr~~~~~~pvi~lt~   81 (119)
T d1peya_          66 RMKVIDENIRVIIMTA   81 (119)
T ss_dssp             HHHHHCTTCEEEEEES
T ss_pred             HHHHhCCCCcEEEEec
Confidence            7776666666666654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.61  E-value=0.34  Score=31.58  Aligned_cols=33  Identities=18%  Similarity=0.215  Sum_probs=27.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      |.++|.|| |-+|.++|..|.+.|++|.++.+.+
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            56777765 5699999999999999999998753

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.50  E-value=3.8  Score=28.61  Aligned_cols=83  Identities=13%  Similarity=0.214  Sum_probs=57.1

Q ss_pred             CCCCCEEEEecCC-CchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhH
Q psy7936          11 RLDGKTVIITGCN-TGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSI   88 (222)
Q Consensus        11 ~~~~k~~lVtGas-~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (222)
                      .++|+.+|=..+. |++|.+    .+.+|+ .|+.++.+.+.++-+.+.++...        ...++.+++.|+.+    
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~--------~~~~~~i~~~D~~~----  102 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITK--------EPEKFEVRKMDANR----  102 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHT--------CGGGEEEEESCHHH----
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhh--------cccccccccccchh----
Confidence            3567887744444 556664    455787 79999999999888888876642        23367788887653    


Q ss_pred             HHHHHHHHhhccceeEEEechhh
Q psy7936          89 RDCAQDINQTEANVHILINNAVY  111 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~  111 (222)
                        +++.......++|+++...-+
T Consensus       103 --~l~~~~~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         103 --ALEQFYEEKLQFDLVLLDPPY  123 (182)
T ss_dssp             --HHHHHHHTTCCEEEEEECCCG
T ss_pred             --hhhhhcccCCCcceEEechhh
Confidence              344444444589999999754

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=86.33  E-value=0.85  Score=31.39  Aligned_cols=42  Identities=26%  Similarity=0.316  Sum_probs=30.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhC--CCEEEEEe--CChhHHHHHH
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGI--GAKVIMAC--RDVEKAETTA   55 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~--g~~v~~~~--r~~~~~~~~~   55 (222)
                      .|++.|.|+||.||..+..-+-++  .++|+.+.  +|.+.+.+..
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~   47 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAA   47 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHH
Confidence            478999999999999988888765  35666654  4555444443

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=86.29  E-value=3.8  Score=28.29  Aligned_cols=78  Identities=8%  Similarity=0.077  Sum_probs=48.0

Q ss_pred             CCCEEEEecCC-CchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCN-TGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|+.+|=.|+. |++|    ...+.+|++|+.++.+++.++.+.+.++...        -..++....+|.        +
T Consensus        41 ~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~--------~~~~v~~~~~d~--------~  100 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTG--------LGARVVALPVEV--------F  100 (171)
T ss_dssp             TCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHT--------CCCEEECSCHHH--------H
T ss_pred             CCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhc--------cccceeeeehhc--------c
Confidence            56677755555 4444    3456679999999999999988888877642        122333322221        2


Q ss_pred             HHHHHhhccceeEEEechh
Q psy7936          92 AQDINQTEANVHILINNAV  110 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag  110 (222)
                      .........++|+++.+.-
T Consensus       101 ~~~~~~~~~~fD~If~DPP  119 (171)
T d1ws6a1         101 LPEAKAQGERFTVAFMAPP  119 (171)
T ss_dssp             HHHHHHTTCCEEEEEECCC
T ss_pred             cccccccCCccceeEEccc
Confidence            2222333357999998864

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.08  E-value=0.5  Score=31.66  Aligned_cols=35  Identities=17%  Similarity=0.153  Sum_probs=29.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      .+|.++|.|| |-+|.++|..|.+.|.+|.++.+..
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            4677888876 5699999999999999999998754

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=85.98  E-value=2.6  Score=30.22  Aligned_cols=98  Identities=12%  Similarity=0.040  Sum_probs=60.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCA   92 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (222)
                      +++++|=.|+..|.   .+..|++.|++|+.++.+++.++.+.+..             ..  ..+.+|+.+..      
T Consensus        42 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~l~~a~~~~-------------~~--~~~~~~~~~l~------   97 (246)
T d2avna1          42 NPCRVLDLGGGTGK---WSLFLQERGFEVVLVDPSKEMLEVAREKG-------------VK--NVVEAKAEDLP------   97 (246)
T ss_dssp             SCCEEEEETCTTCH---HHHHHHTTTCEEEEEESCHHHHHHHHHHT-------------CS--CEEECCTTSCC------
T ss_pred             CCCEEEEECCCCch---hcccccccceEEEEeeccccccccccccc-------------cc--ccccccccccc------
Confidence            45678888887654   34577888999999999988776554321             11  13455655431      


Q ss_pred             HHHHhhccceeEEEechhh-HHhhhHHHHHHHHHhhcCCCCeEEEEE
Q psy7936          93 QDINQTEANVHILINNAVY-CILSNNILFYSILFYAIPGKNVNVYAV  138 (222)
Q Consensus        93 ~~i~~~~~~id~li~~ag~-~~l~~~~~~~~~la~~~~~~gI~v~~v  138 (222)
                          -..+.+|++++...+ ..+.+...+.+.+.+-+.+-|+-+.++
T Consensus        98 ----~~~~~fD~ii~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~~  140 (246)
T d2avna1          98 ----FPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATV  140 (246)
T ss_dssp             ----SCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ----cccccccceeeecchhhhhhhHHHHHHHHHhhcCcCcEEEEEE
Confidence                112467887765443 334455566666666666666555443

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=85.72  E-value=3.5  Score=28.82  Aligned_cols=79  Identities=10%  Similarity=0.057  Sum_probs=52.6

Q ss_pred             CCCCEEEEecCC-CchHHHHHHHHHhCCC-EEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHH
Q psy7936          12 LDGKTVIITGCN-TGIGKVTAQTLYGIGA-KVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIR   89 (222)
Q Consensus        12 ~~~k~~lVtGas-~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (222)
                      +.++++|=.++. |.+|.    ..+.+|+ .|+.++.+.+.++-+.+.++..         ...+..++..|+.+     
T Consensus        42 ~~~~~vLDlfaGsG~~gi----ealsrGa~~v~~VE~~~~a~~~~k~N~~~~---------~~~~~~ii~~d~~~-----  103 (183)
T d2fpoa1          42 IVDAQCLDCFAGSGALGL----EALSRYAAGATLIEMDRAVSQQLIKNLATL---------KAGNARVVNSNAMS-----  103 (183)
T ss_dssp             HTTCEEEETTCTTCHHHH----HHHHTTCSEEEEECSCHHHHHHHHHHHHHT---------TCCSEEEECSCHHH-----
T ss_pred             cchhhhhhhhccccceee----eEEecCcceeEEEEEeechhhHHHHHHhhc---------cccceeeeeecccc-----
Confidence            456677744444 44444    4556787 8999999999999888887764         23466777777321     


Q ss_pred             HHHHHHHhhccceeEEEechhhH
Q psy7936          90 DCAQDINQTEANVHILINNAVYC  112 (222)
Q Consensus        90 ~~~~~i~~~~~~id~li~~ag~~  112 (222)
                          .+.....++|+++...-+.
T Consensus       104 ----~l~~~~~~fDlIf~DPPY~  122 (183)
T d2fpoa1         104 ----FLAQKGTPHNIVFVDPPFR  122 (183)
T ss_dssp             ----HHSSCCCCEEEEEECCSSS
T ss_pred             ----cccccccccCEEEEcCccc
Confidence                2233446899999997543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.54  E-value=0.69  Score=35.57  Aligned_cols=35  Identities=23%  Similarity=0.338  Sum_probs=30.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEe
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMAC   45 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~   45 (222)
                      .++.||+++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            3588999998886 6799999999999999888765

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=85.24  E-value=0.69  Score=33.80  Aligned_cols=36  Identities=22%  Similarity=0.289  Sum_probs=30.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          12 LDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        12 ~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      -++|.++|.||.- .|...|..|+++|++|.++.++.
T Consensus        47 ~~~k~VvIIGaGp-AGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGAGP-SGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcccH-HHHHHHHHHHHhccceeeEeecc
Confidence            3678899999863 57899999999999999998754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.92  E-value=0.4  Score=31.71  Aligned_cols=33  Identities=21%  Similarity=0.240  Sum_probs=28.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      |.++|.|| |-||.++|..|.+.|.+|.++.|++
T Consensus        26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            56777776 5699999999999999999998854

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.84  E-value=0.61  Score=33.20  Aligned_cols=37  Identities=14%  Similarity=0.143  Sum_probs=29.2

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHH
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTA   55 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   55 (222)
                      +.|.| .|-+|+.+|..|+ .|++|+..|-+++..+++.
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHh
Confidence            44555 7899999998775 6999999999988766554

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=84.82  E-value=3.5  Score=30.70  Aligned_cols=74  Identities=16%  Similarity=0.066  Sum_probs=51.8

Q ss_pred             CCCEEEEecCC-CchHHHHHHHHHhCC-CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHH
Q psy7936          13 DGKTVIITGCN-TGIGKVTAQTLYGIG-AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRD   90 (222)
Q Consensus        13 ~~k~~lVtGas-~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (222)
                      .|.++|-.|+. |+++..+|+    .| ++|+.++.|+...+-+.+.++...        -..++.+++.|..+..    
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a~----~~~~~V~avd~n~~a~~~~~~N~~~n~--------l~~~v~~~~~D~~~~~----  170 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIAV----YGKAKVIAIEKDPYTFKFLVENIHLNK--------VEDRMSAYNMDNRDFP----  170 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHHH----HTCCEEEEECCCHHHHHHHHHHHHHTT--------CTTTEEEECSCTTTCC----
T ss_pred             CccEEEECcceEcHHHHHHHH----hCCcEEEEecCCHHHHHHHHHHHHHhC--------CCceEEEEEcchHHhc----
Confidence            57889988887 445555553    34 499999999999888887776531        2346889999976532    


Q ss_pred             HHHHHHhhccceeEEEech
Q psy7936          91 CAQDINQTEANVHILINNA  109 (222)
Q Consensus        91 ~~~~i~~~~~~id~li~~a  109 (222)
                             ..+..|.+|.+.
T Consensus       171 -------~~~~~D~Ii~~~  182 (260)
T d2frna1         171 -------GENIADRILMGY  182 (260)
T ss_dssp             -------CCSCEEEEEECC
T ss_pred             -------cCCCCCEEEECC
Confidence                   124678877763

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=84.82  E-value=0.35  Score=36.55  Aligned_cols=34  Identities=29%  Similarity=0.392  Sum_probs=28.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      +.|.|+|.||.- -|..+|..|+++|++|.++.++
T Consensus        29 ~pkkV~IIGaG~-aGLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          29 NPKHVVIVGAGM-AGLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             SCCEEEEECCBH-HHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCCeEEEECCCH-HHHHHHHHHHHCCCCEEEEeCC
Confidence            457888998763 4888999999999999999764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=84.75  E-value=0.35  Score=36.03  Aligned_cols=31  Identities=16%  Similarity=0.100  Sum_probs=26.2

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      ++|.|| |-.|.++|.+|+++|.+|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677776 4579999999999999999998753

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=84.69  E-value=2.3  Score=32.67  Aligned_cols=48  Identities=15%  Similarity=0.054  Sum_probs=32.3

Q ss_pred             HHHHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeC
Q psy7936          89 RDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHP  140 (222)
Q Consensus        89 ~~~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~P  140 (222)
                      ..+..++.++.+.+|.+|..+|...+.  .++...+....  .+++|..|.|
T Consensus       163 ~t~~~Ei~~q~~~~D~vv~~~G~GG~~--aG~~~~~~~~~--~~~~ii~ve~  210 (331)
T d1tdja1         163 GTLALELLQQDAHLDRVFVPVGGGGLA--AGVAVLIKQLM--PQIKVIAVEA  210 (331)
T ss_dssp             HHHHHHHHHHCTTCCEEEEECSSSHHH--HHHHHHHHHHC--TTCEEEEEEE
T ss_pred             hhHHHHHHHhcCCCCEEEEeCChhHHH--HHHHHHHHHhC--CCcEEEEecc
Confidence            344566777788999999999887643  34444444333  3588888876

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.49  E-value=0.72  Score=34.27  Aligned_cols=35  Identities=23%  Similarity=0.350  Sum_probs=28.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHh-CCCEEEEEe
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYG-IGAKVIMAC   45 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~-~g~~v~~~~   45 (222)
                      .++++++++|-| .|-+|..+|+.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            467899998886 77799999999985 599887665

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=84.42  E-value=2.9  Score=31.08  Aligned_cols=63  Identities=17%  Similarity=0.360  Sum_probs=45.4

Q ss_pred             CCCEEEEecCCCc-hHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCC
Q psy7936          13 DGKTVIITGCNTG-IGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLAS   84 (222)
Q Consensus        13 ~~k~~lVtGas~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (222)
                      .|.++|=.|+.+| +...+|+.+... .+|+.++++++.++...+.+++..        ...++.+...|+.+
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~~-g~V~~vD~~e~~~~~A~~n~~~~~--------~~~nv~~~~~Di~~  148 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNGK-GTLTVVERDEDNLKKAMDNLSEFY--------DIGNVRTSRSDIAD  148 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTTS-SEEEEECSCHHHHHHHHHHHHTTS--------CCTTEEEECSCTTT
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHhc--------CCCceEEEEeeeec
Confidence            5778998998866 466677666544 489999999999988888887643        23456666666654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=84.20  E-value=0.55  Score=34.46  Aligned_cols=34  Identities=21%  Similarity=0.171  Sum_probs=27.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      .++++|.||. --|..+|..|+++|++|+++.|+.
T Consensus         4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4568888875 247788889999999999998864

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.99  E-value=6.8  Score=29.29  Aligned_cols=100  Identities=14%  Similarity=0.137  Sum_probs=69.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .|..+|=.|...|   .++..+++. |++|+.++.+++..+...+.+++..        ....+.+...|..+.      
T Consensus        52 ~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~--------l~~~~~~~~~d~~~~------  114 (280)
T d2fk8a1          52 PGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASID--------TNRSRQVLLQGWEDF------  114 (280)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSC--------CSSCEEEEESCGGGC------
T ss_pred             CCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhc--------cccchhhhhhhhhhh------
Confidence            5778999998865   244555544 8899999999999888777776642        234566666665432      


Q ss_pred             HHHHHhhccceeEEEechhhHHh--hhHHHHHHHHHhhcCCCCeEEE
Q psy7936          92 AQDINQTEANVHILINNAVYCIL--SNNILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l--~~~~~~~~~la~~~~~~gI~v~  136 (222)
                             .+++|.++..-....+  .+...+.+.++.-+++-|.-+.
T Consensus       115 -------~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i  154 (280)
T d2fk8a1         115 -------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV  154 (280)
T ss_dssp             -------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred             -------ccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEE
Confidence                   2467888776665554  3457888889999998886654

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.97  E-value=0.39  Score=34.83  Aligned_cols=34  Identities=24%  Similarity=0.422  Sum_probs=28.8

Q ss_pred             CEEEEecCCCchHHH-----HHHHHHhCCCEEEEEeCCh
Q psy7936          15 KTVIITGCNTGIGKV-----TAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        15 k~~lVtGas~giG~~-----~a~~l~~~g~~v~~~~r~~   48 (222)
                      |++.|+++-||.|+.     +|..|++.|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999999999876     6778899999999998653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.61  E-value=0.52  Score=33.64  Aligned_cols=31  Identities=23%  Similarity=0.132  Sum_probs=25.7

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      ++|.|| |=-|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            678884 3348899999999999999998864

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=83.17  E-value=1.2  Score=31.14  Aligned_cols=38  Identities=34%  Similarity=0.536  Sum_probs=33.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          11 RLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        11 ~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      -+.||+++|.|= +-+|+.+|+.+-..|++|+++..++-
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch
Confidence            368999998875 56999999999999999999998884

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=83.13  E-value=1.3  Score=29.12  Aligned_cols=33  Identities=15%  Similarity=0.121  Sum_probs=28.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCCCEEEEEeCCh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~   48 (222)
                      +.++|.|+ |-||.++|..|.+.|.+|.++.+.+
T Consensus        27 ~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          27 GKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            57778776 5699999999999999999997754

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=83.00  E-value=0.41  Score=33.75  Aligned_cols=45  Identities=18%  Similarity=0.136  Sum_probs=30.5

Q ss_pred             EEEEecCCCchHH--HHHHHHHhC----CCEEEEEeCChhHHHHHHHHHHHh
Q psy7936          16 TVIITGCNTGIGK--VTAQTLYGI----GAKVIMACRDVEKAETTASEIRKH   61 (222)
Q Consensus        16 ~~lVtGas~giG~--~~a~~l~~~----g~~v~~~~r~~~~~~~~~~~i~~~   61 (222)
                      ++.|.|| |.+|.  ++...++..    +.+++++|.++++++.....+++.
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~   54 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKY   54 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHH
Confidence            4667776 44554  455556543    359999999999887766666553

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=82.60  E-value=0.24  Score=33.91  Aligned_cols=85  Identities=11%  Similarity=0.086  Sum_probs=47.3

Q ss_pred             CCCchHHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHHHHHHHhhccc
Q psy7936          22 CNTGIGKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDCAQDINQTEAN  101 (222)
Q Consensus        22 as~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~i~~~~~~  101 (222)
                      |+|-+|+++++.|.+.+..+.+++|+.++++++.+....... ...+.....+++++.+.   ...+..+++.+..   +
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~-~~~~~~~~~DiVil~v~---d~~i~~v~~~l~~---~   78 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAA-TLEKHPELNGVVFVIVP---DRYIKTVANHLNL---G   78 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCC-SSCCCCC---CEEECSC---TTTHHHHHTTTCC---S
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccccccc-chhhhhccCcEEEEecc---chhhhHHHhhhcc---c
Confidence            356699999998866444446889999999988776543221 01111123345555443   2466666666532   2


Q ss_pred             eeEEEechhhHH
Q psy7936         102 VHILINNAVYCI  113 (222)
Q Consensus       102 id~li~~ag~~~  113 (222)
                      =-++|++++...
T Consensus        79 ~~ivi~~s~~~~   90 (153)
T d2i76a2          79 DAVLVHCSGFLS   90 (153)
T ss_dssp             SCCEEECCSSSC
T ss_pred             ceeeeecccchh
Confidence            246777776544

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=82.13  E-value=5.7  Score=27.05  Aligned_cols=96  Identities=11%  Similarity=0.104  Sum_probs=53.8

Q ss_pred             EEEEecCCCchHHHHH-HHHHhCCC-EEEEE-eCChhHH-HHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          16 TVIITGCNTGIGKVTA-QTLYGIGA-KVIMA-CRDVEKA-ETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        16 ~~lVtGas~giG~~~a-~~l~~~g~-~v~~~-~r~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      ++-|.| +|+||.... +.|-.... +++.+ +|+.+.. ....+..             +....        ..++..+
T Consensus         6 rvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~-------------~i~~~--------~~~~d~l   63 (157)
T d1nvmb1           6 KVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM-------------GVTTT--------YAGVEGL   63 (157)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT-------------TCCEE--------SSHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhc-------------CCccc--------ccceeee
Confidence            577889 899998754 44444444 56554 6776532 2222211             11111        1234444


Q ss_pred             HHHHHhhccceeEEEec--hhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeCCc
Q psy7936          92 AQDINQTEANVHILINN--AVYCILSNNILFYSILFYAIPGKNVNVYAVHPGI  142 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~--ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~PG~  142 (222)
                      .+..  .+..+|+++.+  +|       .+..+..+.+..+.|+.|...+|-+
T Consensus        64 ~~~~--~~~~iDiVf~ATpag-------~h~~~~~~~~aa~~G~~VID~s~a~  107 (157)
T d1nvmb1          64 IKLP--EFADIDFVFDATSAS-------AHVQNEALLRQAKPGIRLIDLTPAA  107 (157)
T ss_dssp             HHSG--GGGGEEEEEECSCHH-------HHHHHHHHHHHHCTTCEEEECSTTC
T ss_pred             eecc--cccccCEEEEcCCch-------hHHHhHHHHHHHHcCCEEEEccccc
Confidence            3322  23579999975  33       3344445555568899999999853

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=81.46  E-value=5.9  Score=27.00  Aligned_cols=75  Identities=15%  Similarity=0.169  Sum_probs=48.8

Q ss_pred             cCCCchHHHHHHHHHhC-CCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCC-CChhhHHHHHHHHHhh
Q psy7936          21 GCNTGIGKVTAQTLYGI-GAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDL-ASFKSIRDCAQDINQT   98 (222)
Q Consensus        21 Gas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~i~~~   98 (222)
                      |-...||..++..+++. |++|+-++.+.. .+++.+.+++.          +.+++.+.+=+ +....++++++.+.+.
T Consensus        16 gD~HdiG~~iv~~~l~~~G~~Vi~LG~~~p-~e~~~~~~~~~----------~~d~i~lS~l~~~~~~~~~~~~~~l~~~   84 (156)
T d3bula2          16 GDVHDIGKNIVGVVLQCNNYEIVDLGVMVP-AEKILRTAKEV----------NADLIGLSGLITPSLDEMVNVAKEMERQ   84 (156)
T ss_dssp             TCCCCHHHHHHHHHHHTTTCEEEECCSSBC-HHHHHHHHHHH----------TCSEEEEECCSTHHHHHHHHHHHHHHHT
T ss_pred             CChhhHHHHHHHHHHHHCCCEEEECCCCCC-HHHHHHHHHhh----------CCCEEEEecccccchHHHHHHHHHHHhc
Confidence            34468999999888865 899998887654 34555555553          45777776643 4555677777777665


Q ss_pred             ccceeEEE
Q psy7936          99 EANVHILI  106 (222)
Q Consensus        99 ~~~id~li  106 (222)
                      ..++-+++
T Consensus        85 g~~~~viv   92 (156)
T d3bula2          85 GFTIPLLI   92 (156)
T ss_dssp             TCCSCEEE
T ss_pred             cccceEEE
Confidence            44433333

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.44  E-value=8.7  Score=29.06  Aligned_cols=43  Identities=23%  Similarity=0.228  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i   58 (222)
                      +.|.+||.|+..|   .+++.++++.  .+|.++..+++-.+-..+.+
T Consensus        89 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~  133 (295)
T d1inla_          89 NPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYL  133 (295)
T ss_dssp             SCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHC
T ss_pred             CCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHH
Confidence            3578999999876   5577777764  38999999887665554443

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.39  E-value=3.8  Score=29.76  Aligned_cols=107  Identities=12%  Similarity=0.084  Sum_probs=67.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHH-hCC----CEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhh
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLY-GIG----AKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKS   87 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~-~~g----~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (222)
                      .+..+|..|+.+|--.++.-+++ ..|    .+|+.+.++++..+...+.+.+..-..    ....++.++..|..+-  
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~----~~~~nv~~~~~d~~~~--  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM----LDSGQLLIVEGDGRKG--  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH----HHHTSEEEEESCGGGC--
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhh----cCccEEEEEecccccc--
Confidence            46799999999887777666665 444    489999999887766655544321000    0134688888887642  


Q ss_pred             HHHHHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEe
Q psy7936          88 IRDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVH  139 (222)
Q Consensus        88 v~~~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~  139 (222)
                              ....+++|.++.+++...+-      ..+...+++-|+-|.-|.
T Consensus       154 --------~~~~~~fD~Iiv~~a~~~~p------~~l~~~Lk~gG~lV~pvg  191 (223)
T d1r18a_         154 --------YPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVG  191 (223)
T ss_dssp             --------CGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred             --------cccccceeeEEEEeechhch------HHHHHhcCCCcEEEEEEe
Confidence                    12346899999998876432      234455665565555453

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=81.18  E-value=3.3  Score=31.45  Aligned_cols=109  Identities=13%  Similarity=0.034  Sum_probs=57.0

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCCEEEEEe-CChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecC-------------
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGAKVIMAC-RDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLD-------------   81 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D-------------   81 (222)
                      ..+|+..+|..|.++|..-...|.+++++- .+...  ...+.++.          .+.+++.+..+             
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~k~~~l~~----------~Ga~vi~~~~~~~~~~~~a~~~a~  137 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPE--AKVAATKG----------YGGQVIMYDRYKDDREKMAKEISE  137 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCH--HHHHHHHH----------TTCEEEEECTTTTCHHHHHHHHHH
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeecccccccH--HHHHHHHH----------cCCcEEeccCCchHHHHHHHHHHH
Confidence            357788888888888888888877443332 22211  11112222          13333332222             


Q ss_pred             ---------CCChhhH---HHHHHHHHhhccceeEEEechhhHHhhhHHHHHHHHHhhcCCCCeEEEEEeC
Q psy7936          82 ---------LASFKSI---RDCAQDINQTEANVHILINNAVYCILSNNILFYSILFYAIPGKNVNVYAVHP  140 (222)
Q Consensus        82 ---------~~~~~~v---~~~~~~i~~~~~~id~li~~ag~~~l~~~~~~~~~la~~~~~~gI~v~~v~P  140 (222)
                               ..++..+   ..+..++.++.+.+|.+|..+|..++.  .++...+....  .++++..+.|
T Consensus       138 ~~g~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~d~vvv~~G~GG~~--~Gi~~~~~~~~--~~~~ii~v~~  204 (318)
T d1v71a1         138 REGLTIIPPYDHPHVLAGQGTAAKELFEEVGPLDALFVCLGGGGLL--SGSALAARHFA--PNCEVYGVEP  204 (318)
T ss_dssp             HHTCBCCCSSSSHHHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHH--HHHHHHHHHHC--TTCEEEEEEE
T ss_pred             hcCCEecCCccccccccccchHHHHHHHhcCCCCEEEEcCCchHHH--HHHHHHHHhhC--CCceeecccc
Confidence                     1222211   223445555667788888888877653  33444444433  3577777755

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.13  E-value=0.85  Score=32.78  Aligned_cols=37  Identities=16%  Similarity=0.242  Sum_probs=31.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          10 SRLDGKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        10 ~~~~~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      .++.||.++|.|++. -|..+|..+++.+.+++.+.|+
T Consensus        28 ~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhhhccccccccc
Confidence            468999999999886 4789999999999988887765

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.08  E-value=6.3  Score=29.78  Aligned_cols=30  Identities=13%  Similarity=0.211  Sum_probs=20.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEE
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIM   43 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~   43 (222)
                      |+.-+|+..+|.-|.++|..-...|.++++
T Consensus        53 g~~~vv~aSsGN~g~a~A~~a~~~G~~~~i   82 (319)
T d1p5ja_          53 GCAHFVCSSAGNAGMAAAYAARQLGVPATI   82 (319)
T ss_dssp             TCCEEEECCSSHHHHHHHHHHHHHTCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHhhhcccccee
Confidence            445677877888888888776666764333

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=81.00  E-value=0.52  Score=35.27  Aligned_cols=33  Identities=30%  Similarity=0.492  Sum_probs=27.2

Q ss_pred             CEEEEecCCCchHHH-----HHHHHHhCCCEEEEEeCCh
Q psy7936          15 KTVIITGCNTGIGKV-----TAQTLYGIGAKVIMACRDV   48 (222)
Q Consensus        15 k~~lVtGas~giG~~-----~a~~l~~~g~~v~~~~r~~   48 (222)
                      |++.|+| -||.|+.     +|..|++.|++|.++|-+.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            5677888 8888877     5668999999999998764

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=80.89  E-value=2.1  Score=30.70  Aligned_cols=104  Identities=17%  Similarity=0.162  Sum_probs=72.2

Q ss_pred             CCCEEEEecCCCch-HHHHHHHHHhCCCEEEEEeCChhHHHHHHHHHHHhhhhhcccCCCCCeEEEEecCCCChhhHHHH
Q psy7936          13 DGKTVIITGCNTGI-GKVTAQTLYGIGAKVIMACRDVEKAETTASEIRKHFEVATSEDKKPGEVLIKKLDLASFKSIRDC   91 (222)
Q Consensus        13 ~~k~~lVtGas~gi-G~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (222)
                      .+.++|=.|+..|- ...+++.+...+++|+.++.+++-++...+.+....        ...++.+...|+.+..     
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~--------~~~~~~~~~~d~~~~~-----  105 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYH--------SEIPVEILCNDIRHVE-----  105 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSC--------CSSCEEEECSCTTTCC-----
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhc--------ccchhhhccchhhccc-----
Confidence            45689988988554 556666655668899999999999888877776542        3456777777765431     


Q ss_pred             HHHHHhhccceeEEEechhhHHh--hhHHHHHHHHHhhcCCCCeEEE
Q psy7936          92 AQDINQTEANVHILINNAVYCIL--SNNILFYSILFYAIPGKNVNVY  136 (222)
Q Consensus        92 ~~~i~~~~~~id~li~~ag~~~l--~~~~~~~~~la~~~~~~gI~v~  136 (222)
                             +...|+++.+.....+  .+...+.+.+.+-+++.|+-+.
T Consensus       106 -------~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~  145 (225)
T d1im8a_         106 -------IKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVL  145 (225)
T ss_dssp             -------CCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred             -------cccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeec
Confidence                   1345776666554443  3467888888888988786654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=80.75  E-value=0.61  Score=34.78  Aligned_cols=30  Identities=23%  Similarity=0.337  Sum_probs=24.8

Q ss_pred             EEEecCCCchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          17 VIITGCNTGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        17 ~lVtGas~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      ++|.|| |-.|..+|..|+++|.+|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            667765 346999999999999999999763

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.71  E-value=0.64  Score=35.15  Aligned_cols=31  Identities=19%  Similarity=0.285  Sum_probs=25.5

Q ss_pred             EEEEecCCCchHHHHHHHHHhCCC-EEEEEeCC
Q psy7936          16 TVIITGCNTGIGKVTAQTLYGIGA-KVIMACRD   47 (222)
Q Consensus        16 ~~lVtGas~giG~~~a~~l~~~g~-~v~~~~r~   47 (222)
                      .|+|.||. -+|.++|.+|+++|. +|++++|+
T Consensus         3 dViIIGaG-i~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAG-IVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCS-HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcC-HHHHHHHHHHHHcCCCcEEEEeCC
Confidence            36777764 589999999999996 69999875

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=80.65  E-value=0.95  Score=34.85  Aligned_cols=35  Identities=23%  Similarity=0.284  Sum_probs=28.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHhCCCEEEEEeCChh
Q psy7936          14 GKTVIITGCNTGIGKVTAQTLYGIGAKVIMACRDVE   49 (222)
Q Consensus        14 ~k~~lVtGas~giG~~~a~~l~~~g~~v~~~~r~~~   49 (222)
                      .|.++|.||. =-|..+|..|++.|++|.++.++..
T Consensus         2 ~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCCC
Confidence            5788898875 2478889999999999999987653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.42  E-value=1.3  Score=30.15  Aligned_cols=34  Identities=15%  Similarity=0.148  Sum_probs=26.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHhCC----CEEEEEeCCh
Q psy7936          15 KTVIITGCNTGIGKVTAQTLYGIG----AKVIMACRDV   48 (222)
Q Consensus        15 k~~lVtGas~giG~~~a~~l~~~g----~~v~~~~r~~   48 (222)
                      |++-|.||||-.|+.+.+.|.++.    ..+++..++.
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            357788999999999999887763    2677776554

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=80.41  E-value=5.5  Score=26.37  Aligned_cols=35  Identities=17%  Similarity=0.238  Sum_probs=29.5

Q ss_pred             CCCEEEEecCC---CchHHHHHHHHHhCCCEEEEEeCC
Q psy7936          13 DGKTVIITGCN---TGIGKVTAQTLYGIGAKVIMACRD   47 (222)
Q Consensus        13 ~~k~~lVtGas---~giG~~~a~~l~~~g~~v~~~~r~   47 (222)
                      +.|++.|.|||   +..|..+.+.|.+.|++++.+.-+
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            45789999999   568999999999999988877543

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=80.04  E-value=6.4  Score=30.16  Aligned_cols=43  Identities=23%  Similarity=0.210  Sum_probs=30.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHhCC--CEEEEEeCChhHHHHHHHHH
Q psy7936          13 DGKTVIITGCNTGIGKVTAQTLYGIG--AKVIMACRDVEKAETTASEI   58 (222)
Q Consensus        13 ~~k~~lVtGas~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~i   58 (222)
                      +.|.+||.|+..|   .+++.++++.  .+|.++..+++-.+-..+.+
T Consensus       106 ~pk~VLIiGgG~G---~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~  150 (312)
T d2b2ca1         106 DPKRVLIIGGGDG---GILREVLKHESVEKVTMCEIDEMVIDVAKKFL  150 (312)
T ss_dssp             SCCEEEEESCTTS---HHHHHHTTCTTCCEEEEECSCHHHHHHHHHHC
T ss_pred             CCCeEEEeCCCch---HHHHHHHHcCCcceEEEEcccHHHHHHHHhhc
Confidence            4578999998875   4566777764  38999988887665555443